Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47378.t1 | XP_024633754.1 | 75 | 893 | 179 | 7 | 1 | 864 | 1 | 878 | 2.20E-254 | 888.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47378.t1 | A0A396JS83 | 75.0 | 893 | 179 | 7 | 1 | 864 | 1 | 878 | 1.6e-254 | 888.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050165 | MS.gene47378 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene05087 | MS.gene47378 | 0.845068 | 5.11E-59 | -1.69E-46 |
| MS.gene055634 | MS.gene47378 | 0.859538 | 3.86E-63 | -1.69E-46 |
| MS.gene057148 | MS.gene47378 | 0.827579 | 1.45E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 277 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACATGTAATGGAAAT+TGG | 0.167483 | 1.4:+50987193 | None:intergenic |
| GATATACAAGTAATGGAAAT+TGG | 0.185502 | 1.4:+50986911 | None:intergenic |
| TCACTTGATAGTGGATATTT+TGG | 0.205904 | 1.4:+50987135 | None:intergenic |
| CCTTGTGTTCCTTGAAATCC+TGG | 0.250219 | 1.4:+50986760 | None:intergenic |
| TTGTAGAACCTCAACCAAAT+TGG | 0.252973 | 1.4:+50985490 | None:intergenic |
| TAGGGAGTTGGTTCCCAATT+TGG | 0.269466 | 1.4:-50985504 | MS.gene47378:CDS |
| GACTGTATGGCAAAGTTTAT+TGG | 0.301242 | 1.4:-50986164 | MS.gene47378:CDS |
| TTAGGATGACTAGACTTTAA+TGG | 0.313659 | 1.4:+50986733 | None:intergenic |
| TCGCAAGTGGCGCACTCATC+TGG | 0.324352 | 1.4:-50988054 | MS.gene47378:CDS |
| TTGCCCTATCGTCATCATTT+AGG | 0.327091 | 1.4:+50986434 | None:intergenic |
| ATCTCAGCGTCCGCCTTATC+AGG | 0.352764 | 1.4:-50986707 | MS.gene47378:CDS |
| GATACACAGCTGATGAAGTA+TGG | 0.355135 | 1.4:+50987550 | None:intergenic |
| GATACACAGCTGATGAAGTA+TGG | 0.355135 | 1.4:+50987841 | None:intergenic |
| TTGAGGGAAGTTCGTCTTAA+GGG | 0.355793 | 1.4:-50986211 | MS.gene47378:CDS |
| AACATCTTTCCCCTTATCAT+TGG | 0.367203 | 1.4:+50988112 | None:intergenic |
| AAAGTAACTCGAGTAGTTTC+TGG | 0.368232 | 1.4:-50987042 | MS.gene47378:CDS |
| ACATCTTTCCCCTTATCATT+GGG | 0.370025 | 1.4:+50988113 | None:intergenic |
| AGTAATGGAAATTGGGTAGA+TGG | 0.384566 | 1.4:+50986919 | None:intergenic |
| TACGTGTTGCGTTGTGTTGA+TGG | 0.386656 | 1.4:+50986048 | None:intergenic |
| GGCCCCTTTCTTGTAGTTGA+CGG | 0.387502 | 1.4:+50985580 | None:intergenic |
| TTACCTGATTCTTTCTAGAA+TGG | 0.393574 | 1.4:+50985848 | None:intergenic |
| TGTAATGGAAATTGGGTAGA+TGG | 0.393624 | 1.4:+50987201 | None:intergenic |
| TTTGAAGGTTCACTTGATAG+TGG | 0.397186 | 1.4:+50987126 | None:intergenic |
| TGTAGAACCTCAACCAAATT+GGG | 0.399007 | 1.4:+50985491 | None:intergenic |
| TATGTAGGTGGTGGATAAAT+AGG | 0.400107 | 1.4:+50987474 | None:intergenic |
| CATGAGTCTTAATATTCCTT+TGG | 0.400784 | 1.4:-50985558 | MS.gene47378:CDS |
| TTTGTAGGTGGTGGATAAAT+AGG | 0.401237 | 1.4:+50987765 | None:intergenic |
| CTAGGTGGACGCTTCTTTGA+AGG | 0.409645 | 1.4:+50987111 | None:intergenic |
| GTTGAGGGAAGTTCGTCTTA+AGG | 0.412066 | 1.4:-50986212 | MS.gene47378:CDS |
| AAGCGTCCACCTAGTGATAA+GGG | 0.413682 | 1.4:-50987102 | MS.gene47378:CDS |
| ACTAGCCCACCCAATGATAA+GGG | 0.413752 | 1.4:-50988122 | MS.gene47378:CDS |
| TGACCATTCTAGAAAGAATC+AGG | 0.425997 | 1.4:-50985851 | MS.gene47378:intron |
| AACTAGCCCACCCAATGATA+AGG | 0.431267 | 1.4:-50988123 | MS.gene47378:CDS |
| GGCAAAGTTTATTGGAGCAT+TGG | 0.431611 | 1.4:-50986156 | MS.gene47378:CDS |
| ACCACTTGTTCGGGTGTAGT+TGG | 0.436086 | 1.4:-50985635 | MS.gene47378:CDS |
| ATATACATGTAATGGAAATT+GGG | 0.437628 | 1.4:+50987194 | None:intergenic |
| GTTCCTTGAAATCCTGGGTT+GGG | 0.437913 | 1.4:+50986766 | None:intergenic |
| TTTAGTGGATATACATGTAA+TGG | 0.440301 | 1.4:+50987186 | None:intergenic |
| ACTCAGATCATGAAGGAAAC+TGG | 0.440348 | 1.4:-50985886 | MS.gene47378:CDS |
| TGTTCCTTGAAATCCTGGGT+TGG | 0.444757 | 1.4:+50986765 | None:intergenic |
| TCGTCGGCACAGGTATAAAT+TGG | 0.445880 | 1.4:+50987289 | None:intergenic |
| AGAGGAGTTCAAACGTGAAC+GGG | 0.446513 | 1.4:-50985921 | MS.gene47378:CDS |
| ATTGGATAGGTGAGACTGTA+TGG | 0.449490 | 1.4:-50986177 | MS.gene47378:CDS |
| GCAGGGTTACAACTCATAGA+TGG | 0.450605 | 1.4:+50985680 | None:intergenic |
| TCATCGGCATAGGTATAAAC+TGG | 0.451031 | 1.4:+50987007 | None:intergenic |
| ATATACAAGTAATGGAAATT+GGG | 0.451555 | 1.4:+50986912 | None:intergenic |
| GACACCCTTCCCCTTACCAC+TGG | 0.453777 | 1.4:+50987371 | None:intergenic |
| CAAGCGGCCACCCAGTGGTA+AGG | 0.455295 | 1.4:-50987382 | MS.gene47378:CDS |
| ATGCCCAACCCAGGATTTCA+AGG | 0.458880 | 1.4:-50986769 | MS.gene47378:CDS |
| CCACCCGACAATGGATTTGT+AGG | 0.461139 | 1.4:+50987414 | None:intergenic |
| CCACCCGACAACGGATTTGT+AGG | 0.461868 | 1.4:+50987750 | None:intergenic |
| GTTGGTTCCCAATTTGGTTG+AGG | 0.463056 | 1.4:-50985498 | MS.gene47378:CDS |
| CTTGTGTTCCTTGAAATCCT+GGG | 0.463860 | 1.4:+50986761 | None:intergenic |
| GGAGGCTGAGTATAGGTATG+AGG | 0.464859 | 1.4:+50986961 | None:intergenic |
| GAAGCGTCCACCTAGTGATA+AGG | 0.465742 | 1.4:-50987103 | MS.gene47378:CDS |
| TTCTGATCATGAGTCTACTT+TGG | 0.468251 | 1.4:-50985255 | MS.gene47378:CDS |
| GGGATTAACATGTTTGATGA+TGG | 0.472319 | 1.4:-50986655 | MS.gene47378:CDS |
| TTCACAGACTTACCCTTTGG+TGG | 0.473658 | 1.4:+50986612 | None:intergenic |
| TCTTTCCCCTTATCATTGGG+TGG | 0.474341 | 1.4:+50988116 | None:intergenic |
| AAACGTGAACGGGCTTCATA+AGG | 0.475012 | 1.4:-50985911 | MS.gene47378:CDS |
| GTTCACGTTTGAACTCCTCT+TGG | 0.475194 | 1.4:+50985924 | None:intergenic |
| GGCACAGGTATAAATTGGTC+TGG | 0.477208 | 1.4:+50987294 | None:intergenic |
| TGAGAACTGGTAGGTGGAGG+TGG | 0.480811 | 1.4:+50987228 | None:intergenic |
| CCATCTTGACCAGCCTGATA+AGG | 0.480953 | 1.4:+50986694 | None:intergenic |
| CGGGTGGACTTTCACACAAA+CGG | 0.482984 | 1.4:-50987734 | MS.gene47378:CDS |
| CTGGGTGGCCGCTTGTGTAA+AGG | 0.484039 | 1.4:+50987390 | None:intergenic |
| AACCAACTCCCTACCACTAC+AGG | 0.484892 | 1.4:+50985514 | None:intergenic |
| AGAAACATGGCATCAAAGAA+AGG | 0.485403 | 1.4:-50986094 | MS.gene47378:CDS |
| GGGGCAACAACATCCTTAGC+AGG | 0.485567 | 1.4:+50985662 | None:intergenic |
| TGATCATGAGTCTACTTTGG+TGG | 0.485914 | 1.4:-50985252 | MS.gene47378:CDS |
| GCTAGAATGACTAGTGGTAA+TGG | 0.486198 | 1.4:+50987344 | None:intergenic |
| GAAACATGGCATCAAAGAAA+GGG | 0.487800 | 1.4:-50986093 | MS.gene47378:CDS |
| CATTCTAGCAAGGTAACTCC+TGG | 0.488789 | 1.4:-50987330 | MS.gene47378:CDS |
| TTGAAATCCTGGGTTGGGCA+TGG | 0.490031 | 1.4:+50986771 | None:intergenic |
| CTTTCCCCTTATCATTGGGT+GGG | 0.492865 | 1.4:+50988117 | None:intergenic |
| ATGCCGTCAACTACAAGAAA+GGG | 0.493045 | 1.4:-50985583 | MS.gene47378:CDS |
| TGCGGTGGATATACAAGTAA+TGG | 0.493457 | 1.4:+50986904 | None:intergenic |
| TATCCTGATGGTGTATGTTT+CGG | 0.493683 | 1.4:+50987798 | None:intergenic |
| CCACCGAAACATACACCATC+AGG | 0.495567 | 1.4:-50987801 | MS.gene47378:CDS |
| CCACCGAAACTTACACCATC+GGG | 0.496584 | 1.4:-50987510 | MS.gene47378:CDS |
| GACAATGGATTTGTAGGTGG+TGG | 0.498910 | 1.4:+50987420 | None:intergenic |
| TGAGTATAGGTATGAGGAGA+TGG | 0.499968 | 1.4:+50986967 | None:intergenic |
| AACGCAACACGTAACTCAAA+TGG | 0.500116 | 1.4:-50986038 | MS.gene47378:intron |
| GATCATGAGTCTACTTTGGT+GGG | 0.501918 | 1.4:-50985251 | MS.gene47378:CDS |
| GCCACCCAGTGGTAAGGGGA+AGG | 0.502442 | 1.4:-50987376 | MS.gene47378:CDS |
| GAAGTATGGGTAGGTGGAGG+CGG | 0.502512 | 1.4:+50987855 | None:intergenic |
| GGTAGATGGAGATTGAGAAC+TGG | 0.505071 | 1.4:+50987215 | None:intergenic |
| GATATCGCATCCACTACTAA+TGG | 0.505243 | 1.4:-50987075 | MS.gene47378:CDS |
| CCACCTACAAATCCGTTGTC+GGG | 0.507001 | 1.4:-50987753 | MS.gene47378:CDS |
| CCACCTACAAATCCATTGTC+GGG | 0.509021 | 1.4:-50987417 | MS.gene47378:CDS |
| CAATAGATAAACATGTCATC+AGG | 0.512057 | 1.4:-50988149 | None:intergenic |
| AGCCTGTAGTGGTAGGGAGT+TGG | 0.512995 | 1.4:-50985516 | MS.gene47378:CDS |
| CAAACGGCCAGTCAGTGGTA+AGG | 0.513566 | 1.4:-50987718 | MS.gene47378:CDS |
| GATCAGAAGGTTGGAGGCGG+CGG | 0.513611 | 1.4:+50985270 | None:intergenic |
| GCCAGTCAGTGGTAAGGGGA+AGG | 0.513865 | 1.4:-50987712 | MS.gene47378:CDS |
| ATAGGTATAAACTGGTCTAA+AGG | 0.514240 | 1.4:+50987015 | None:intergenic |
| GGAACATAGGTACGAGGAGA+TGG | 0.514609 | 1.4:+50987249 | None:intergenic |
| TAGACTCATGATCAGAAGGT+TGG | 0.515338 | 1.4:+50985261 | None:intergenic |
| GAGAGAATGACTAGTGGTAG+TGG | 0.516279 | 1.4:+50987680 | None:intergenic |
| CAAAGGAATATTAAGACTCA+TGG | 0.516583 | 1.4:+50985559 | None:intergenic |
| GTGTAGTTGGAGGTAAGAAA+AGG | 0.517698 | 1.4:-50985622 | MS.gene47378:CDS |
| AAAAGCCACAGACAAAATGT+AGG | 0.518392 | 1.4:-50986465 | MS.gene47378:CDS |
| CATCGTTAGCCTGTAGTGGT+AGG | 0.519129 | 1.4:-50985523 | MS.gene47378:CDS |
| AAGCGGCCACCCAGTGGTAA+GGG | 0.520413 | 1.4:-50987381 | MS.gene47378:CDS |
| GGTAGGTGGAGGCTGAGTAT+AGG | 0.521908 | 1.4:+50986954 | None:intergenic |
| TTGCTGAAGAAACGGACAGA+GGG | 0.522070 | 1.4:-50985392 | MS.gene47378:CDS |
| ACCACCTACAAATCCATTGT+CGG | 0.522590 | 1.4:-50987418 | MS.gene47378:CDS |
| GGAGGCGGCGGTGACGTCCA+TGG | 0.522976 | 1.4:+50985282 | None:intergenic |
| ACCACCTACAAATCCGTTGT+CGG | 0.525060 | 1.4:-50987754 | MS.gene47378:CDS |
| GATGGTGCATATGCATTTAG+TGG | 0.525647 | 1.4:+50987171 | None:intergenic |
| TATCCCGATGGTGTAAGTTT+CGG | 0.525804 | 1.4:+50987507 | None:intergenic |
| CAGACTTACCCTTTGGTGGA+AGG | 0.526125 | 1.4:+50986616 | None:intergenic |
| CCAGTCAGTGGTAAGGGGAA+GGG | 0.526964 | 1.4:-50987711 | MS.gene47378:CDS |
| GTATCTTTAGTCAGCGGCAT+AGG | 0.527229 | 1.4:+50988002 | None:intergenic |
| AAACGGCCAGTCAGTGGTAA+GGG | 0.527405 | 1.4:-50987717 | MS.gene47378:CDS |
| CAGCGTCCGCCTTATCAGGC+TGG | 0.530739 | 1.4:-50986703 | MS.gene47378:CDS |
| AGTGGTAAGGGGAAGGGTGT+CGG | 0.531423 | 1.4:-50987705 | MS.gene47378:CDS |
| CCACTTGATAGTGGATATGT+AGG | 0.532942 | 1.4:+50986823 | None:intergenic |
| TGTGAAGGTCCACTTGATAG+TGG | 0.533328 | 1.4:+50986814 | None:intergenic |
| ACACCCTTCCCCTTACCACT+GGG | 0.533838 | 1.4:+50987372 | None:intergenic |
| ATCTGTGTATGTGCAGTTGT+CGG | 0.534228 | 1.4:+50987609 | None:intergenic |
| CCACCCAGTGGTAAGGGGAA+GGG | 0.534766 | 1.4:-50987375 | MS.gene47378:CDS |
| AAATTATTCGCTCAAGACCA+TGG | 0.535708 | 1.4:-50985299 | MS.gene47378:CDS |
| GACTGAGAACGGGTAGGTGG+AGG | 0.537395 | 1.4:+50986943 | None:intergenic |
| TGATAAGGCGGACGCTGAGA+TGG | 0.537853 | 1.4:+50986709 | None:intergenic |
| ACTCGAATTTCCTCGCGAGT+AGG | 0.538984 | 1.4:+50987942 | None:intergenic |
| AACAGTAGGTCTAGTAGTAG+TGG | 0.539497 | 1.4:+50988085 | None:intergenic |
| GATGCCGTCAACTACAAGAA+AGG | 0.540009 | 1.4:-50985584 | MS.gene47378:CDS |
| CTACACCCGAACAAGTGGTA+AGG | 0.540049 | 1.4:+50985639 | None:intergenic |
| GGAGCATATGTACGAGGAGA+TGG | 0.541412 | 1.4:+50987876 | None:intergenic |
| AGTGGTAAGGGGAAGGGTGT+CGG | 0.543479 | 1.4:-50987369 | MS.gene47378:CDS |
| ATGTTGCATCCACTACTACT+AGG | 0.543509 | 1.4:-50987965 | MS.gene47378:CDS |
| TTATTCAACCTTCCACCAAA+GGG | 0.545420 | 1.4:-50986624 | MS.gene47378:intron |
| GTATGTGCAGTCGTCGGCAC+AGG | 0.546385 | 1.4:+50987279 | None:intergenic |
| ACTTGTTCGGGTGTAGTTGG+AGG | 0.547278 | 1.4:-50985632 | MS.gene47378:CDS |
| CCTTATCAGGCTGGTCAAGA+TGG | 0.548609 | 1.4:-50986694 | MS.gene47378:CDS |
| GGCGGACGCTGAGATGGCTT+AGG | 0.550526 | 1.4:+50986715 | None:intergenic |
| GTGACCTAAATGATGACGAT+AGG | 0.557016 | 1.4:-50986438 | MS.gene47378:CDS |
| AAGATCCTGTTCGAAAACTA+CGG | 0.557292 | 1.4:-50985448 | MS.gene47378:CDS |
| TGAGCATATGTATGAGAAGA+TGG | 0.562096 | 1.4:+50987585 | None:intergenic |
| TATGAGTTGTAACCCTGCTA+AGG | 0.563576 | 1.4:-50985675 | MS.gene47378:CDS |
| GTTATTCAACCTTCCACCAA+AGG | 0.563686 | 1.4:-50986625 | MS.gene47378:CDS |
| CCCTTCCCCTTACCACTGAC+TGG | 0.566348 | 1.4:+50987711 | None:intergenic |
| AGCGGCCACCCAGTGGTAAG+GGG | 0.566990 | 1.4:-50987380 | MS.gene47378:CDS |
| GGAGATTGAGAACTGGTAGG+TGG | 0.567399 | 1.4:+50987222 | None:intergenic |
| TTTAGTTCCATGCCCAACCC+AGG | 0.569175 | 1.4:-50986778 | MS.gene47378:CDS |
| GGTAGATGGAGACTGAGAAC+GGG | 0.569951 | 1.4:+50986933 | None:intergenic |
| GGCAATCAAGACGTTGATGT+TGG | 0.570273 | 1.4:-50985230 | MS.gene47378:CDS |
| TCCAACTACACCCGAACAAG+TGG | 0.570300 | 1.4:+50985634 | None:intergenic |
| GGGTAGATGGAGACTGAGAA+CGG | 0.570642 | 1.4:+50986932 | None:intergenic |
| AAATACAGGAGAAGTGTACA+TGG | 0.571389 | 1.4:-50986303 | MS.gene47378:intron |
| CCCGATGGTGTAAGTTTCGG+TGG | 0.573397 | 1.4:+50987510 | None:intergenic |
| GTCTGTGTATGTGCAGTCGT+GGG | 0.574424 | 1.4:+50987900 | None:intergenic |
| ATCGTTAGCCTGTAGTGGTA+GGG | 0.576808 | 1.4:-50985522 | MS.gene47378:CDS |
| GGTCAGTGCCCACATTGGAT+AGG | 0.579187 | 1.4:-50986190 | MS.gene47378:CDS |
| AGCTGGTCTAAAACATGTTG+AGG | 0.579381 | 1.4:+50988029 | None:intergenic |
| TACACCCGAACAAGTGGTAA+GGG | 0.579884 | 1.4:+50985640 | None:intergenic |
| ACTCATGATCAGAAGGTTGG+AGG | 0.581322 | 1.4:+50985264 | None:intergenic |
| TGTAAAGGTCCACCCGACAA+TGG | 0.581837 | 1.4:+50987405 | None:intergenic |
| AAAGCCACAGACAAAATGTA+GGG | 0.582116 | 1.4:-50986464 | MS.gene47378:CDS |
| ACCGCATACATATGCACCAC+CGG | 0.582783 | 1.4:-50986887 | MS.gene47378:CDS |
| TTTGGCAGTGCGTATGTCGA+TGG | 0.583317 | 1.4:+50987153 | None:intergenic |
| ACCACCGAAACTTACACCAT+CGG | 0.584439 | 1.4:-50987511 | MS.gene47378:CDS |
| TATGTAGGTGTTGGATATGT+CGG | 0.584602 | 1.4:+50986838 | None:intergenic |
| CACCCGAACAAGTGGTAAGG+GGG | 0.585944 | 1.4:+50985642 | None:intergenic |
| TGACCTAAATGATGACGATA+GGG | 0.586015 | 1.4:-50986437 | MS.gene47378:CDS |
| TGACTTGTCTGATATGTTGA+GGG | 0.587957 | 1.4:-50986227 | MS.gene47378:CDS |
| ACATCATGCATATGCTCCAT+CGG | 0.589782 | 1.4:-50987448 | MS.gene47378:CDS |
| GTATGTGCAGTCATCGGCAT+AGG | 0.589843 | 1.4:+50986997 | None:intergenic |
| AAGAGGAGTTCAAACGTGAA+CGG | 0.590882 | 1.4:-50985922 | MS.gene47378:CDS |
| CCAGGATTTCAAGGAACACA+AGG | 0.592183 | 1.4:-50986760 | MS.gene47378:CDS |
| GCGAGTAGGCCTAGTAGTAG+TGG | 0.592919 | 1.4:+50987956 | None:intergenic |
| GTCGGCGGTGCGGATGTCGA+CGG | 0.593551 | 1.4:+50986856 | None:intergenic |
| TACTACTAGGCCTACTCGCG+AGG | 0.593671 | 1.4:-50987952 | MS.gene47378:CDS |
| GGTGGTGCATATGCATGTTG+TGG | 0.593870 | 1.4:+50987528 | None:intergenic |
| TGATGTGAATATGTAGGTGG+TGG | 0.594089 | 1.4:+50987465 | None:intergenic |
| GGTGGTGCATAGGCATGTTG+TGG | 0.595863 | 1.4:+50987819 | None:intergenic |
| ATACACAGCTGATGAAGTAT+GGG | 0.598166 | 1.4:+50987551 | None:intergenic |
| ATACACAGCTGATGAAGTAT+GGG | 0.598166 | 1.4:+50987842 | None:intergenic |
| GTAGGTGGTGGATTCACCGA+TGG | 0.598426 | 1.4:+50987432 | None:intergenic |
| CCACAGACAAAATGTAGGGA+TGG | 0.598675 | 1.4:-50986460 | MS.gene47378:CDS |
| GGTAGGTGGAGGTGGAACAT+AGG | 0.598829 | 1.4:+50987236 | None:intergenic |
| AAAGTAGACTCATGATCAGA+AGG | 0.598945 | 1.4:+50985257 | None:intergenic |
| CTGTTGAGCGTACTCGCAAG+TGG | 0.599569 | 1.4:-50988067 | MS.gene47378:CDS |
| CGGGTGGACCTTTACACAAG+CGG | 0.600983 | 1.4:-50987398 | MS.gene47378:CDS |
| TCTGGAGAACTAGAAACTCC+AGG | 0.601740 | 1.4:+50987312 | None:intergenic |
| GGGGAAAGCCTACAGAAAAG+AGG | 0.602123 | 1.4:-50986073 | MS.gene47378:CDS |
| GGAGACTGAGAACGGGTAGG+TGG | 0.602886 | 1.4:+50986940 | None:intergenic |
| AGATGGCATTCATGATGCTG+AGG | 0.604447 | 1.4:-50986677 | MS.gene47378:CDS |
| TCAGCGGCATAGGTACAAGC+TGG | 0.604900 | 1.4:+50988012 | None:intergenic |
| CTGACTAAAGATACACAGAC+GGG | 0.607010 | 1.4:-50987993 | MS.gene47378:CDS |
| GTATGTGCAGTCGTGGGCAT+AGG | 0.609019 | 1.4:+50987906 | None:intergenic |
| TGTATGTTTCGGTGGTGCAT+AGG | 0.609183 | 1.4:+50987809 | None:intergenic |
| GTAGGTGGTGGATAAATAGG+TGG | 0.609496 | 1.4:+50987477 | None:intergenic |
| GATGGCATTCATGATGCTGA+GGG | 0.610481 | 1.4:-50986676 | MS.gene47378:CDS |
| GGTGGTTGTGTGTATCCTGA+TGG | 0.611455 | 1.4:+50987786 | None:intergenic |
| GCTGATGAAGTATGGGTAGG+TGG | 0.612690 | 1.4:+50987558 | None:intergenic |
| GCTGATGAAGTATGGGTAGG+TGG | 0.612690 | 1.4:+50987849 | None:intergenic |
| TACCACTAGTCATTCTCTCA+AGG | 0.612823 | 1.4:-50987676 | MS.gene47378:CDS |
| GATTGAGAACTGGTAGGTGG+AGG | 0.613125 | 1.4:+50987225 | None:intergenic |
| CATGATCAGAAGGTTGGAGG+CGG | 0.613383 | 1.4:+50985267 | None:intergenic |
| CCTACATATCCACTATCAAG+TGG | 0.613583 | 1.4:-50986823 | MS.gene47378:CDS |
| GTTTGTGTATGTGCAGTCAT+CGG | 0.614271 | 1.4:+50986991 | None:intergenic |
| GTCTGTGTATCTTTAGTCAG+CGG | 0.615011 | 1.4:+50987996 | None:intergenic |
| AGCGTCCACCTAGTGATAAG+GGG | 0.616167 | 1.4:-50987101 | MS.gene47378:CDS |
| TTGGTGCCGATGATGAATGA+TGG | 0.617362 | 1.4:-50985211 | None:intergenic |
| AGTCTGTGTATGTGCAGTCG+TGG | 0.617498 | 1.4:+50987899 | None:intergenic |
| GATAGTGGATATGTAGGTGT+TGG | 0.619025 | 1.4:+50986829 | None:intergenic |
| GACAACGGATTTGTAGGTGG+TGG | 0.619207 | 1.4:+50987756 | None:intergenic |
| GAAGCACCATCATTCATCAT+CGG | 0.619327 | 1.4:+50985205 | None:intergenic |
| TATGCATGATGTGAATATGT+AGG | 0.619505 | 1.4:+50987459 | None:intergenic |
| GATGCTCTTGCATTATCCAA+AGG | 0.620366 | 1.4:+50985542 | None:intergenic |
| ATCTGTGTATGTGCAGTCGT+CGG | 0.624063 | 1.4:+50987273 | None:intergenic |
| TAAGGATACTCAGATCATGA+AGG | 0.624522 | 1.4:-50985893 | MS.gene47378:CDS |
| TTGTCGGTGCAGCTATACAT+TGG | 0.624983 | 1.4:+50987625 | None:intergenic |
| AACGGCCAGTCAGTGGTAAG+GGG | 0.625413 | 1.4:-50987716 | MS.gene47378:CDS |
| CCTGATGGTGTATGTTTCGG+TGG | 0.626388 | 1.4:+50987801 | None:intergenic |
| GATGAAGTATGGGTAGGTGG+AGG | 0.627193 | 1.4:+50987852 | None:intergenic |
| TACCACTAGTCATTCTAGCA+AGG | 0.630639 | 1.4:-50987340 | MS.gene47378:CDS |
| ACACCCGAACAAGTGGTAAG+GGG | 0.633338 | 1.4:+50985641 | None:intergenic |
| AGAGCATCGTTAGCCTGTAG+TGG | 0.637169 | 1.4:-50985527 | MS.gene47378:CDS |
| GCGAGAACGACCATTAGTAG+TGG | 0.637821 | 1.4:+50987065 | None:intergenic |
| AAACATGGCATCAAAGAAAG+GGG | 0.640330 | 1.4:-50986092 | MS.gene47378:CDS |
| TCTTGACCAGCCTGATAAGG+CGG | 0.640440 | 1.4:+50986697 | None:intergenic |
| TGTGAAAGTCCACCCGACAA+CGG | 0.640872 | 1.4:+50987741 | None:intergenic |
| CCCGACAATGGATTTGTAGG+TGG | 0.641838 | 1.4:+50987417 | None:intergenic |
| TATAGACTAAGAAGTCCAAG+AGG | 0.643321 | 1.4:-50985939 | MS.gene47378:intron |
| CCTACAAATCCGTTGTCGGG+TGG | 0.643713 | 1.4:-50987750 | MS.gene47378:CDS |
| GTAGGTGGTGGATAAATAGG+TGG | 0.645462 | 1.4:+50987768 | None:intergenic |
| TTGCGAGTACGCTCAACAGT+AGG | 0.645839 | 1.4:+50988071 | None:intergenic |
| GATGGAGATTGAGAACTGGT+AGG | 0.646075 | 1.4:+50987219 | None:intergenic |
| CTAGCCCACCCAATGATAAG+GGG | 0.646234 | 1.4:-50988121 | MS.gene47378:CDS |
| TACCTTGCTAGAATGACTAG+TGG | 0.646973 | 1.4:+50987338 | None:intergenic |
| TTAAGGGTCAGTGCCCACAT+TGG | 0.648200 | 1.4:-50986195 | MS.gene47378:CDS |
| TCACACAAACGGCCAGTCAG+TGG | 0.648647 | 1.4:-50987723 | MS.gene47378:CDS |
| CAGTCTCACCTATCCAATGT+GGG | 0.650425 | 1.4:+50986182 | None:intergenic |
| CCCGACAACGGATTTGTAGG+TGG | 0.651696 | 1.4:+50987753 | None:intergenic |
| ACAGTCTCACCTATCCAATG+TGG | 0.653828 | 1.4:+50986181 | None:intergenic |
| CCCTTCCCCTTACCACTGGG+TGG | 0.654508 | 1.4:+50987375 | None:intergenic |
| GTGACTTGTCTGATATGTTG+AGG | 0.654751 | 1.4:-50986228 | MS.gene47378:CDS |
| TGCTGAAGAAACGGACAGAG+GGG | 0.654920 | 1.4:-50985391 | MS.gene47378:CDS |
| GCTGACTAAAGATACACAGA+CGG | 0.660781 | 1.4:-50987994 | MS.gene47378:CDS |
| GCGTCCACCTAGTGATAAGG+GGG | 0.664476 | 1.4:-50987100 | MS.gene47378:CDS |
| ATCAAGTGGACCTTCACACA+AGG | 0.664485 | 1.4:-50986809 | MS.gene47378:CDS |
| ACAGCTGATGAAGTATGGGT+AGG | 0.665045 | 1.4:+50987555 | None:intergenic |
| ACAGCTGATGAAGTATGGGT+AGG | 0.665045 | 1.4:+50987846 | None:intergenic |
| GTCGACGGTGTATACGCCGG+TGG | 0.665297 | 1.4:+50986871 | None:intergenic |
| TATAGGAGAAGTGTGAGGCG+AGG | 0.665947 | 1.4:-50985739 | MS.gene47378:intron |
| ACCCGAACAAGTGGTAAGGG+GGG | 0.667715 | 1.4:+50985643 | None:intergenic |
| TAGATAAACATGTCATCAGG+AGG | 0.668522 | 1.4:-50988146 | None:intergenic |
| AAAGATTATGAATTCGCAGG+GGG | 0.672074 | 1.4:-50985417 | MS.gene47378:CDS |
| TGCCGTCAACTACAAGAAAG+GGG | 0.675987 | 1.4:-50985582 | MS.gene47378:CDS |
| GGGCAACAACATCCTTAGCA+GGG | 0.676632 | 1.4:+50985663 | None:intergenic |
| GATGTCGACGGTGTATACGC+CGG | 0.677914 | 1.4:+50986868 | None:intergenic |
| TTGGGCATGGAACTAAATTG+TGG | 0.681887 | 1.4:+50986784 | None:intergenic |
| TGCCAGAGAAAAGAGAAACA+TGG | 0.684012 | 1.4:-50986107 | MS.gene47378:CDS |
| ATAGGTCAACTGAAAACTAG+CGG | 0.685932 | 1.4:+50986129 | None:intergenic |
| GGTGGCAGTGTGTATCCCGA+TGG | 0.687025 | 1.4:+50987495 | None:intergenic |
| GATGGAGACTGAGAACGGGT+AGG | 0.689290 | 1.4:+50986937 | None:intergenic |
| TTCATTATAGGAGAAGTGTG+AGG | 0.694705 | 1.4:-50985744 | MS.gene47378:intron |
| ATTGCTGAAGAAACGGACAG+AGG | 0.696753 | 1.4:-50985393 | MS.gene47378:CDS |
| CCTACAAATCCATTGTCGGG+TGG | 0.698994 | 1.4:-50987414 | MS.gene47378:CDS |
| TACCTTGAGAGAATGACTAG+TGG | 0.700140 | 1.4:+50987674 | None:intergenic |
| AATTGTGGTACCTTGTGTGA+AGG | 0.703679 | 1.4:+50986799 | None:intergenic |
| GATGAAGTATGGGTAGGTGG+AGG | 0.705834 | 1.4:+50987561 | None:intergenic |
| AAAAGATTATGAATTCGCAG+GGG | 0.706642 | 1.4:-50985418 | MS.gene47378:CDS |
| GCATGATGTGAATATGTAGG+TGG | 0.708116 | 1.4:+50987462 | None:intergenic |
| CATATCAGACAAGTCACGCG+AGG | 0.709129 | 1.4:+50986234 | None:intergenic |
| TTACACAAGCGGCCACCCAG+TGG | 0.712688 | 1.4:-50987387 | MS.gene47378:CDS |
| ATGGCATTCATGATGCTGAG+GGG | 0.723530 | 1.4:-50986675 | MS.gene47378:CDS |
| GTAGGTGTTGGATATGTCGG+CGG | 0.725546 | 1.4:+50986841 | None:intergenic |
| GGTGGTGCATATGTATGCGG+TGG | 0.727513 | 1.4:+50986889 | None:intergenic |
| GCCGGTGGTGCATATGTATG+CGG | 0.731075 | 1.4:+50986886 | None:intergenic |
| TGTTGGATATGTCGGCGGTG+CGG | 0.734289 | 1.4:+50986846 | None:intergenic |
| GGAGGTGGAACATAGGTACG+AGG | 0.741556 | 1.4:+50987243 | None:intergenic |
| GGAGGCGGAGCATATGTACG+AGG | 0.748386 | 1.4:+50987870 | None:intergenic |
| TGACTAAAGATACACAGACG+GGG | 0.766798 | 1.4:-50987992 | MS.gene47378:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGTTATATAAAAAATAC+AGG | - | chr1.4:50987034-50987053 | MS.gene47378:CDS | 10.0% |
| !!! | AGTTCTTCTTTATTTATTTT+GGG | - | chr1.4:50987350-50987369 | MS.gene47378:CDS | 15.0% |
| !!! | TAGTTCTTCTTTATTTATTT+TGG | - | chr1.4:50987349-50987368 | MS.gene47378:CDS | 15.0% |
| !!! | TTTGTATTGATTTATTAACA+TGG | - | chr1.4:50986794-50986813 | MS.gene47378:CDS | 15.0% |
| !! | AAATAAAGAAGAACTAGTTA+AGG | + | chr1.4:50987345-50987364 | None:intergenic | 20.0% |
| !! | TTATTAACATGGTATTGTTA+AGG | - | chr1.4:50986805-50986824 | MS.gene47378:CDS | 20.0% |
| !! | TTTGTATGGTTATTCATTAT+AGG | - | chr1.4:50987595-50987614 | MS.gene47378:CDS | 20.0% |
| !!! | ATATACAAGTAATGGAAATT+GGG | + | chr1.4:50986442-50986461 | None:intergenic | 20.0% |
| !!! | ATATACATGTAATGGAAATT+GGG | + | chr1.4:50986160-50986179 | None:intergenic | 20.0% |
| ! | AAAAAAGATTATGAATTCGC+AGG | - | chr1.4:50987931-50987950 | MS.gene47378:CDS | 25.0% |
| ! | AAAAAGATTATGAATTCGCA+GGG | - | chr1.4:50987932-50987951 | MS.gene47378:CDS | 25.0% |
| !! | GATATACAAGTAATGGAAAT+TGG | + | chr1.4:50986443-50986462 | None:intergenic | 25.0% |
| !! | GATATACATGTAATGGAAAT+TGG | + | chr1.4:50986161-50986180 | None:intergenic | 25.0% |
| !! | TTTAGTGGATATACATGTAA+TGG | + | chr1.4:50986168-50986187 | None:intergenic | 25.0% |
| !!! | TTGTTATTTGACTCTTTGTA+TGG | - | chr1.4:50987581-50987600 | MS.gene47378:CDS | 25.0% |
| AAAAGATTATGAATTCGCAG+GGG | - | chr1.4:50987933-50987952 | MS.gene47378:CDS | 30.0% | |
| CAAAGGAATATTAAGACTCA+TGG | + | chr1.4:50987795-50987814 | None:intergenic | 30.0% | |
| CATGAGTCTTAATATTCCTT+TGG | - | chr1.4:50987793-50987812 | MS.gene47378:CDS | 30.0% | |
| TATGCATGATGTGAATATGT+AGG | + | chr1.4:50985895-50985914 | None:intergenic | 30.0% | |
| TTAGGATGACTAGACTTTAA+TGG | + | chr1.4:50986621-50986640 | None:intergenic | 30.0% | |
| ! | ATAGGTATAAACTGGTCTAA+AGG | + | chr1.4:50986339-50986358 | None:intergenic | 30.0% |
| ! | TTACCTGATTCTTTCTAGAA+TGG | + | chr1.4:50987506-50987525 | None:intergenic | 30.0% |
| !!! | TCACTTGATAGTGGATATTT+TGG | + | chr1.4:50986219-50986238 | None:intergenic | 30.0% |
| AAAAGCCACAGACAAAATGT+AGG | - | chr1.4:50986886-50986905 | MS.gene47378:CDS | 35.0% | |
| AAACATGGCATCAAAGAAAG+GGG | - | chr1.4:50987259-50987278 | MS.gene47378:CDS | 35.0% | |
| AAAGATTATGAATTCGCAGG+GGG | - | chr1.4:50987934-50987953 | MS.gene47378:CDS | 35.0% | |
| AAAGCCACAGACAAAATGTA+GGG | - | chr1.4:50986887-50986906 | MS.gene47378:CDS | 35.0% | |
| AAAGTAACTCGAGTAGTTTC+TGG | - | chr1.4:50986309-50986328 | MS.gene47378:intron | 35.0% | |
| AAAGTAGACTCATGATCAGA+AGG | + | chr1.4:50988097-50988116 | None:intergenic | 35.0% | |
| AAATTATTCGCTCAAGACCA+TGG | - | chr1.4:50988052-50988071 | MS.gene47378:CDS | 35.0% | |
| AACATCTTTCCCCTTATCAT+TGG | + | chr1.4:50985242-50985261 | None:intergenic | 35.0% | |
| AAGATCCTGTTCGAAAACTA+CGG | - | chr1.4:50987903-50987922 | MS.gene47378:CDS | 35.0% | |
| ACATCTTTCCCCTTATCATT+GGG | + | chr1.4:50985241-50985260 | None:intergenic | 35.0% | |
| ACGTCTGCAAAAAATGAAAG+AGG | - | chr1.4:50988000-50988019 | MS.gene47378:CDS | 35.0% | |
| AGAAACATGGCATCAAAGAA+AGG | - | chr1.4:50987257-50987276 | MS.gene47378:CDS | 35.0% | |
| ATACACAGCTGATGAAGTAT+GGG | + | chr1.4:50985512-50985531 | None:intergenic | 35.0% | |
| ATAGGTCAACTGAAAACTAG+CGG | + | chr1.4:50987225-50987244 | None:intergenic | 35.0% | |
| CGATAGGGCAAAAAAATTCA+AGG | - | chr1.4:50986929-50986948 | MS.gene47378:CDS | 35.0% | |
| GAAACATGGCATCAAAGAAA+GGG | - | chr1.4:50987258-50987277 | MS.gene47378:CDS | 35.0% | |
| GACTGTATGGCAAAGTTTAT+TGG | - | chr1.4:50987187-50987206 | MS.gene47378:CDS | 35.0% | |
| GGGATTAACATGTTTGATGA+TGG | - | chr1.4:50986696-50986715 | MS.gene47378:CDS | 35.0% | |
| TAAGGATACTCAGATCATGA+AGG | - | chr1.4:50987458-50987477 | MS.gene47378:CDS | 35.0% | |
| TAATTCACAGACTTACCCTT+TGG | + | chr1.4:50986745-50986764 | None:intergenic | 35.0% | |
| TATAGACTAAGAAGTCCAAG+AGG | - | chr1.4:50987412-50987431 | MS.gene47378:CDS | 35.0% | |
| TGAGCATATGTATGAGAAGA+TGG | + | chr1.4:50985769-50985788 | None:intergenic | 35.0% | |
| TGTAGAACCTCAACCAAATT+GGG | + | chr1.4:50987863-50987882 | None:intergenic | 35.0% | |
| TTATTCAACCTTCCACCAAA+GGG | - | chr1.4:50986727-50986746 | MS.gene47378:CDS | 35.0% | |
| TTCTGATCATGAGTCTACTT+TGG | - | chr1.4:50988096-50988115 | MS.gene47378:CDS | 35.0% | |
| TTGTAGAACCTCAACCAAAT+TGG | + | chr1.4:50987864-50987883 | None:intergenic | 35.0% | |
| TTTGAAGGTTCACTTGATAG+TGG | + | chr1.4:50986228-50986247 | None:intergenic | 35.0% | |
| ! | AAATACAGGAGAAGTGTACA+TGG | - | chr1.4:50987048-50987067 | MS.gene47378:CDS | 35.0% |
| ! | AGTAATGGAAATTGGGTAGA+TGG | + | chr1.4:50986435-50986454 | None:intergenic | 35.0% |
| ! | TATCCTGATGGTGTATGTTT+CGG | + | chr1.4:50985556-50985575 | None:intergenic | 35.0% |
| ! | TGACCATTCTAGAAAGAATC+AGG | - | chr1.4:50987500-50987519 | MS.gene47378:CDS | 35.0% |
| ! | TGACCTAAATGATGACGATA+GGG | - | chr1.4:50986914-50986933 | MS.gene47378:CDS | 35.0% |
| ! | TGACTTGTCTGATATGTTGA+GGG | - | chr1.4:50987124-50987143 | MS.gene47378:CDS | 35.0% |
| ! | TGTAATGGAAATTGGGTAGA+TGG | + | chr1.4:50986153-50986172 | None:intergenic | 35.0% |
| ! | TGTCTGTGGCTTTTTATGTT+GGG | + | chr1.4:50986880-50986899 | None:intergenic | 35.0% |
| ! | TTCATTATAGGAGAAGTGTG+AGG | - | chr1.4:50987607-50987626 | MS.gene47378:CDS | 35.0% |
| ! | TTGTCTGTGGCTTTTTATGT+TGG | + | chr1.4:50986881-50986900 | None:intergenic | 35.0% |
| !! | TATGTAGGTGGTGGATAAAT+AGG | + | chr1.4:50985880-50985899 | None:intergenic | 35.0% |
| !! | TATGTAGGTGTTGGATATGT+CGG | + | chr1.4:50986516-50986535 | None:intergenic | 35.0% |
| !! | TTTGTAGGTGGTGGATAAAT+AGG | + | chr1.4:50985589-50985608 | None:intergenic | 35.0% |
| AACAGTAGGTCTAGTAGTAG+TGG | + | chr1.4:50985269-50985288 | None:intergenic | 40.0% | |
| AACGCAACACGTAACTCAAA+TGG | - | chr1.4:50987313-50987332 | MS.gene47378:CDS | 40.0% | |
| AAGAGGAGTTCAAACGTGAA+CGG | - | chr1.4:50987429-50987448 | MS.gene47378:CDS | 40.0% | |
| AATTGTGGTACCTTGTGTGA+AGG | + | chr1.4:50986555-50986574 | None:intergenic | 40.0% | |
| ACATCATGCATATGCTCCAT+CGG | - | chr1.4:50985903-50985922 | MS.gene47378:CDS | 40.0% | |
| ACCACCTACAAATCCATTGT+CGG | - | chr1.4:50985933-50985952 | MS.gene47378:CDS | 40.0% | |
| ACTCAGATCATGAAGGAAAC+TGG | - | chr1.4:50987465-50987484 | MS.gene47378:CDS | 40.0% | |
| ATCTGTGTATGTGCAGTTGT+CGG | + | chr1.4:50985745-50985764 | None:intergenic | 40.0% | |
| ATGCCGTCAACTACAAGAAA+GGG | - | chr1.4:50987768-50987787 | MS.gene47378:CDS | 40.0% | |
| ATGTTGCATCCACTACTACT+AGG | - | chr1.4:50985257-50985276 | MS.gene47378:CDS | 40.0% | |
| ATTGGATAGGTGAGACTGTA+TGG | - | chr1.4:50987174-50987193 | MS.gene47378:CDS | 40.0% | |
| CCTACATATCCACTATCAAG+TGG | - | chr1.4:50986528-50986547 | MS.gene47378:intron | 40.0% | |
| CTGACTAAAGATACACAGAC+GGG | - | chr1.4:50985358-50985377 | MS.gene47378:CDS | 40.0% | |
| CTTGTGTTCCTTGAAATCCT+GGG | + | chr1.4:50986593-50986612 | None:intergenic | 40.0% | |
| GATACACAGCTGATGAAGTA+TGG | + | chr1.4:50985513-50985532 | None:intergenic | 40.0% | |
| GATATCGCATCCACTACTAA+TGG | - | chr1.4:50986276-50986295 | MS.gene47378:CDS | 40.0% | |
| GATCATGAGTCTACTTTGGT+GGG | - | chr1.4:50988100-50988119 | MS.gene47378:CDS | 40.0% | |
| GATGCTCTTGCATTATCCAA+AGG | + | chr1.4:50987812-50987831 | None:intergenic | 40.0% | |
| GATGGTGCATATGCATTTAG+TGG | + | chr1.4:50986183-50986202 | None:intergenic | 40.0% | |
| GCATGATGTGAATATGTAGG+TGG | + | chr1.4:50985892-50985911 | None:intergenic | 40.0% | |
| GCTAGAATGACTAGTGGTAA+TGG | + | chr1.4:50986010-50986029 | None:intergenic | 40.0% | |
| GCTGACTAAAGATACACAGA+CGG | - | chr1.4:50985357-50985376 | MS.gene47378:CDS | 40.0% | |
| GGCAAAGTTTATTGGAGCAT+TGG | - | chr1.4:50987195-50987214 | MS.gene47378:CDS | 40.0% | |
| GTCTGTGTATCTTTAGTCAG+CGG | + | chr1.4:50985358-50985377 | None:intergenic | 40.0% | |
| GTGTAGTTGGAGGTAAGAAA+AGG | - | chr1.4:50987729-50987748 | MS.gene47378:CDS | 40.0% | |
| GTTATTCAACCTTCCACCAA+AGG | - | chr1.4:50986726-50986745 | MS.gene47378:CDS | 40.0% | |
| GTTTGTGTATGTGCAGTCAT+CGG | + | chr1.4:50986363-50986382 | None:intergenic | 40.0% | |
| TACCACTAGTCATTCTAGCA+AGG | - | chr1.4:50986011-50986030 | MS.gene47378:intron | 40.0% | |
| TACCACTAGTCATTCTCTCA+AGG | - | chr1.4:50985675-50985694 | MS.gene47378:CDS | 40.0% | |
| TACCTTGAGAGAATGACTAG+TGG | + | chr1.4:50985680-50985699 | None:intergenic | 40.0% | |
| TACCTTGCTAGAATGACTAG+TGG | + | chr1.4:50986016-50986035 | None:intergenic | 40.0% | |
| TAGACTCATGATCAGAAGGT+TGG | + | chr1.4:50988093-50988112 | None:intergenic | 40.0% | |
| TATCCCGATGGTGTAAGTTT+CGG | + | chr1.4:50985847-50985866 | None:intergenic | 40.0% | |
| TATGAGTTGTAACCCTGCTA+AGG | - | chr1.4:50987676-50987695 | MS.gene47378:CDS | 40.0% | |
| TCATCGGCATAGGTATAAAC+TGG | + | chr1.4:50986347-50986366 | None:intergenic | 40.0% | |
| TGACTAAAGATACACAGACG+GGG | - | chr1.4:50985359-50985378 | MS.gene47378:CDS | 40.0% | |
| TGAGTATAGGTATGAGGAGA+TGG | + | chr1.4:50986387-50986406 | None:intergenic | 40.0% | |
| TGATCATGAGTCTACTTTGG+TGG | - | chr1.4:50988099-50988118 | MS.gene47378:CDS | 40.0% | |
| TGATGTGAATATGTAGGTGG+TGG | + | chr1.4:50985889-50985908 | None:intergenic | 40.0% | |
| TGCCAGAGAAAAGAGAAACA+TGG | - | chr1.4:50987244-50987263 | MS.gene47378:CDS | 40.0% | |
| TGCGGTGGATATACAAGTAA+TGG | + | chr1.4:50986450-50986469 | None:intergenic | 40.0% | |
| TTGAGGGAAGTTCGTCTTAA+GGG | - | chr1.4:50987140-50987159 | MS.gene47378:CDS | 40.0% | |
| TTGCCCTATCGTCATCATTT+AGG | + | chr1.4:50986920-50986939 | None:intergenic | 40.0% | |
| TTGGGCATGGAACTAAATTG+TGG | + | chr1.4:50986570-50986589 | None:intergenic | 40.0% | |
| ! | AGCTGGTCTAAAACATGTTG+AGG | + | chr1.4:50985325-50985344 | None:intergenic | 40.0% |
| ! | AGTTTCCGTAGTTTTCGAAC+AGG | + | chr1.4:50987911-50987930 | None:intergenic | 40.0% |
| ! | GCTGAAATGCTTTTCGTCTT+CGG | + | chr1.4:50986846-50986865 | None:intergenic | 40.0% |
| ! | GTGACCTAAATGATGACGAT+AGG | - | chr1.4:50986913-50986932 | MS.gene47378:CDS | 40.0% |
| ! | GTGACTTGTCTGATATGTTG+AGG | - | chr1.4:50987123-50987142 | MS.gene47378:CDS | 40.0% |
| ! | GTTTCTCTTTTCTCTGGCAT+AGG | + | chr1.4:50987243-50987262 | None:intergenic | 40.0% |
| ! | TGATGGAACCTCTTTTCTGT+AGG | + | chr1.4:50987289-50987308 | None:intergenic | 40.0% |
| ! | TGCCATGTTTCTCTTTTCTC+TGG | + | chr1.4:50987249-50987268 | None:intergenic | 40.0% |
| !! | CCACTTGATAGTGGATATGT+AGG | + | chr1.4:50986531-50986550 | None:intergenic | 40.0% |
| !! | GATAGTGGATATGTAGGTGT+TGG | + | chr1.4:50986525-50986544 | None:intergenic | 40.0% |
| AACTAGCCCACCCAATGATA+AGG | - | chr1.4:50985228-50985247 | MS.gene47378:CDS | 45.0% | |
| AAGCGTCCACCTAGTGATAA+GGG | - | chr1.4:50986249-50986268 | MS.gene47378:CDS | 45.0% | |
| ACAGCTGATGAAGTATGGGT+AGG | + | chr1.4:50985508-50985527 | None:intergenic | 45.0% | |
| ACAGTCTCACCTATCCAATG+TGG | + | chr1.4:50987173-50987192 | None:intergenic | 45.0% | |
| ACCACCGAAACTTACACCAT+CGG | - | chr1.4:50985840-50985859 | MS.gene47378:intron | 45.0% | |
| ACCACCTACAAATCCGTTGT+CGG | - | chr1.4:50985597-50985616 | MS.gene47378:CDS | 45.0% | |
| ACTAGCCCACCCAATGATAA+GGG | - | chr1.4:50985229-50985248 | MS.gene47378:CDS | 45.0% | |
| ACTCATGATCAGAAGGTTGG+AGG | + | chr1.4:50988090-50988109 | None:intergenic | 45.0% | |
| AGAGGAGTTCAAACGTGAAC+GGG | - | chr1.4:50987430-50987449 | MS.gene47378:CDS | 45.0% | |
| AGATGGCATTCATGATGCTG+AGG | - | chr1.4:50986674-50986693 | MS.gene47378:CDS | 45.0% | |
| AGGGGGAATTGCTGAAGAAA+CGG | - | chr1.4:50987951-50987970 | MS.gene47378:CDS | 45.0% | |
| ATATCCTCCCCCTTATCACT+AGG | + | chr1.4:50986261-50986280 | None:intergenic | 45.0% | |
| ATCAAGTGGACCTTCACACA+AGG | - | chr1.4:50986542-50986561 | MS.gene47378:intron | 45.0% | |
| ATCTGTGTATGTGCAGTCGT+CGG | + | chr1.4:50986081-50986100 | None:intergenic | 45.0% | |
| ATGGCATTCATGATGCTGAG+GGG | - | chr1.4:50986676-50986695 | MS.gene47378:CDS | 45.0% | |
| ATTGCTGAAGAAACGGACAG+AGG | - | chr1.4:50987958-50987977 | MS.gene47378:CDS | 45.0% | |
| CAGTCTCACCTATCCAATGT+GGG | + | chr1.4:50987172-50987191 | None:intergenic | 45.0% | |
| CATTCTAGCAAGGTAACTCC+TGG | - | chr1.4:50986021-50986040 | MS.gene47378:intron | 45.0% | |
| CCACAGACAAAATGTAGGGA+TGG | - | chr1.4:50986891-50986910 | MS.gene47378:CDS | 45.0% | |
| CCACCTACAAATCCATTGTC+GGG | - | chr1.4:50985934-50985953 | MS.gene47378:CDS | 45.0% | |
| CCAGGATTTCAAGGAACACA+AGG | - | chr1.4:50986591-50986610 | MS.gene47378:intron | 45.0% | |
| CCTTGTGTTCCTTGAAATCC+TGG | + | chr1.4:50986594-50986613 | None:intergenic | 45.0% | |
| CTTTCCCCTTATCATTGGGT+GGG | + | chr1.4:50985237-50985256 | None:intergenic | 45.0% | |
| GAGAGAATGACTAGTGGTAG+TGG | + | chr1.4:50985674-50985693 | None:intergenic | 45.0% | |
| GATGCCGTCAACTACAAGAA+AGG | - | chr1.4:50987767-50987786 | MS.gene47378:CDS | 45.0% | |
| GATGGAGATTGAGAACTGGT+AGG | + | chr1.4:50986135-50986154 | None:intergenic | 45.0% | |
| GATGGCATTCATGATGCTGA+GGG | - | chr1.4:50986675-50986694 | MS.gene47378:CDS | 45.0% | |
| GCAGGGTTACAACTCATAGA+TGG | + | chr1.4:50987674-50987693 | None:intergenic | 45.0% | |
| GGCAATCAAGACGTTGATGT+TGG | - | chr1.4:50988121-50988140 | MS.gene47378:CDS | 45.0% | |
| GGCACAGGTATAAATTGGTC+TGG | + | chr1.4:50986060-50986079 | None:intergenic | 45.0% | |
| GGTAGATGGAGATTGAGAAC+TGG | + | chr1.4:50986139-50986158 | None:intergenic | 45.0% | |
| GTATCTTTAGTCAGCGGCAT+AGG | + | chr1.4:50985352-50985371 | None:intergenic | 45.0% | |
| GTTCACGTTTGAACTCCTCT+TGG | + | chr1.4:50987430-50987449 | None:intergenic | 45.0% | |
| GTTCCTTGAAATCCTGGGTT+GGG | + | chr1.4:50986588-50986607 | None:intergenic | 45.0% | |
| GTTGAGGGAAGTTCGTCTTA+AGG | - | chr1.4:50987139-50987158 | MS.gene47378:CDS | 45.0% | |
| TACACCCGAACAAGTGGTAA+GGG | + | chr1.4:50987714-50987733 | None:intergenic | 45.0% | |
| TACGTGTTGCGTTGTGTTGA+TGG | + | chr1.4:50987306-50987325 | None:intergenic | 45.0% | |
| TCGTCGGCACAGGTATAAAT+TGG | + | chr1.4:50986065-50986084 | None:intergenic | 45.0% | |
| TCTGGAGAACTAGAAACTCC+AGG | + | chr1.4:50986042-50986061 | None:intergenic | 45.0% | |
| TCTTTCCCCTTATCATTGGG+TGG | + | chr1.4:50985238-50985257 | None:intergenic | 45.0% | |
| TGCCGTCAACTACAAGAAAG+GGG | - | chr1.4:50987769-50987788 | MS.gene47378:CDS | 45.0% | |
| TGTATGTTTCGGTGGTGCAT+AGG | + | chr1.4:50985545-50985564 | None:intergenic | 45.0% | |
| TGTGAAGGTCCACTTGATAG+TGG | + | chr1.4:50986540-50986559 | None:intergenic | 45.0% | |
| TGTTCCTTGAAATCCTGGGT+TGG | + | chr1.4:50986589-50986608 | None:intergenic | 45.0% | |
| TTCACAGACTTACCCTTTGG+TGG | + | chr1.4:50986742-50986761 | None:intergenic | 45.0% | |
| TTGCTGAAGAAACGGACAGA+GGG | - | chr1.4:50987959-50987978 | MS.gene47378:CDS | 45.0% | |
| TTGTCGGTGCAGCTATACAT+TGG | + | chr1.4:50985729-50985748 | None:intergenic | 45.0% | |
| ! | AAACGTGAACGGGCTTCATA+AGG | - | chr1.4:50987440-50987459 | MS.gene47378:CDS | 45.0% |
| ! | ATCGTTAGCCTGTAGTGGTA+GGG | - | chr1.4:50987829-50987848 | MS.gene47378:CDS | 45.0% |
| ! | CCATCCCTACATTTTGTCTG+TGG | + | chr1.4:50986894-50986913 | None:intergenic | 45.0% |
| ! | GACAATGGATTTGTAGGTGG+TGG | + | chr1.4:50985934-50985953 | None:intergenic | 45.0% |
| ! | GTTGGTTCCCAATTTGGTTG+AGG | - | chr1.4:50987853-50987872 | MS.gene47378:CDS | 45.0% |
| ! | TAGGGAGTTGGTTCCCAATT+TGG | - | chr1.4:50987847-50987866 | MS.gene47378:CDS | 45.0% |
| !! | CTTTTCGTCTTCGGCTTTGA+AGG | + | chr1.4:50986837-50986856 | None:intergenic | 45.0% |
| !! | GTAGGTGGTGGATAAATAGG+TGG | + | chr1.4:50985586-50985605 | None:intergenic | 45.0% |
| !! | TATATAACATAAAATATAAT+AGG | + | chr1.4:50987026-50987045 | None:intergenic | 5.0% |
| AAACGGCCAGTCAGTGGTAA+GGG | - | chr1.4:50985634-50985653 | MS.gene47378:CDS | 50.0% | |
| AACCAACTCCCTACCACTAC+AGG | + | chr1.4:50987840-50987859 | None:intergenic | 50.0% | |
| ACACCCGAACAAGTGGTAAG+GGG | + | chr1.4:50987713-50987732 | None:intergenic | 50.0% | |
| ACCACTTGTTCGGGTGTAGT+TGG | - | chr1.4:50987716-50987735 | MS.gene47378:CDS | 50.0% | |
| ACCGCATACATATGCACCAC+CGG | - | chr1.4:50986464-50986483 | MS.gene47378:CDS | 50.0% | |
| ACTCGAATTTCCTCGCGAGT+AGG | + | chr1.4:50985412-50985431 | None:intergenic | 50.0% | |
| ACTTGTTCGGGTGTAGTTGG+AGG | - | chr1.4:50987719-50987738 | MS.gene47378:CDS | 50.0% | |
| AGCGTCCACCTAGTGATAAG+GGG | - | chr1.4:50986250-50986269 | MS.gene47378:CDS | 50.0% | |
| AGTCTGTGTATGTGCAGTCG+TGG | + | chr1.4:50985455-50985474 | None:intergenic | 50.0% | |
| ATGCCCAACCCAGGATTTCA+AGG | - | chr1.4:50986582-50986601 | MS.gene47378:intron | 50.0% | |
| CAGACTTACCCTTTGGTGGA+AGG | + | chr1.4:50986738-50986757 | None:intergenic | 50.0% | |
| CATATCAGACAAGTCACGCG+AGG | + | chr1.4:50987120-50987139 | None:intergenic | 50.0% | |
| CATGATCAGAAGGTTGGAGG+CGG | + | chr1.4:50988087-50988106 | None:intergenic | 50.0% | |
| CCACCGAAACATACACCATC+AGG | - | chr1.4:50985550-50985569 | MS.gene47378:CDS | 50.0% | |
| CCACCGAAACTTACACCATC+GGG | - | chr1.4:50985841-50985860 | MS.gene47378:intron | 50.0% | |
| CCACCTACAAATCCGTTGTC+GGG | - | chr1.4:50985598-50985617 | MS.gene47378:CDS | 50.0% | |
| CCATCTTGACCAGCCTGATA+AGG | + | chr1.4:50986660-50986679 | None:intergenic | 50.0% | |
| CCTACAAATCCATTGTCGGG+TGG | - | chr1.4:50985937-50985956 | MS.gene47378:CDS | 50.0% | |
| CTACACCCGAACAAGTGGTA+AGG | + | chr1.4:50987715-50987734 | None:intergenic | 50.0% | |
| CTAGCCCACCCAATGATAAG+GGG | - | chr1.4:50985230-50985249 | MS.gene47378:CDS | 50.0% | |
| CTAGGTGGACGCTTCTTTGA+AGG | + | chr1.4:50986243-50986262 | None:intergenic | 50.0% | |
| GATGAAGTATGGGTAGGTGG+AGG | + | chr1.4:50985502-50985521 | None:intergenic | 50.0% | |
| GATTGAGAACTGGTAGGTGG+AGG | + | chr1.4:50986129-50986148 | None:intergenic | 50.0% | |
| GCGAGAACGACCATTAGTAG+TGG | + | chr1.4:50986289-50986308 | None:intergenic | 50.0% | |
| GCTGATGAAGTATGGGTAGG+TGG | + | chr1.4:50985505-50985524 | None:intergenic | 50.0% | |
| GGAACATAGGTACGAGGAGA+TGG | + | chr1.4:50986105-50986124 | None:intergenic | 50.0% | |
| GGAGATTGAGAACTGGTAGG+TGG | + | chr1.4:50986132-50986151 | None:intergenic | 50.0% | |
| GGAGCATATGTACGAGGAGA+TGG | + | chr1.4:50985478-50985497 | None:intergenic | 50.0% | |
| GGAGGCTGAGTATAGGTATG+AGG | + | chr1.4:50986393-50986412 | None:intergenic | 50.0% | |
| GGCCCCTTTCTTGTAGTTGA+CGG | + | chr1.4:50987774-50987793 | None:intergenic | 50.0% | |
| GGGCAACAACATCCTTAGCA+GGG | + | chr1.4:50987691-50987710 | None:intergenic | 50.0% | |
| GGGGAAAGCCTACAGAAAAG+AGG | - | chr1.4:50987278-50987297 | MS.gene47378:CDS | 50.0% | |
| GGGTAGATGGAGACTGAGAA+CGG | + | chr1.4:50986422-50986441 | None:intergenic | 50.0% | |
| GGTAGATGGAGACTGAGAAC+GGG | + | chr1.4:50986421-50986440 | None:intergenic | 50.0% | |
| GGTGGTGCATATGCATGTTG+TGG | + | chr1.4:50985826-50985845 | None:intergenic | 50.0% | |
| GGTGGTTGTGTGTATCCTGA+TGG | + | chr1.4:50985568-50985587 | None:intergenic | 50.0% | |
| GTATGTGCAGTCATCGGCAT+AGG | + | chr1.4:50986357-50986376 | None:intergenic | 50.0% | |
| GTCTGTGTATGTGCAGTCGT+GGG | + | chr1.4:50985454-50985473 | None:intergenic | 50.0% | |
| TCCAACTACACCCGAACAAG+TGG | + | chr1.4:50987720-50987739 | None:intergenic | 50.0% | |
| TCTTGACCAGCCTGATAAGG+CGG | + | chr1.4:50986657-50986676 | None:intergenic | 50.0% | |
| TGCTGAAGAAACGGACAGAG+GGG | - | chr1.4:50987960-50987979 | MS.gene47378:CDS | 50.0% | |
| TGTAAAGGTCCACCCGACAA+TGG | + | chr1.4:50985949-50985968 | None:intergenic | 50.0% | |
| TGTGAAAGTCCACCCGACAA+CGG | + | chr1.4:50985613-50985632 | None:intergenic | 50.0% | |
| TTAAGGGTCAGTGCCCACAT+TGG | - | chr1.4:50987156-50987175 | MS.gene47378:CDS | 50.0% | |
| TTGCGAGTACGCTCAACAGT+AGG | + | chr1.4:50985283-50985302 | None:intergenic | 50.0% | |
| TTTGGCAGTGCGTATGTCGA+TGG | + | chr1.4:50986201-50986220 | None:intergenic | 50.0% | |
| ! | CATCGTTAGCCTGTAGTGGT+AGG | - | chr1.4:50987828-50987847 | MS.gene47378:CDS | 50.0% |
| ! | CCACCCGACAATGGATTTGT+AGG | + | chr1.4:50985940-50985959 | None:intergenic | 50.0% |
| ! | CCCGACAATGGATTTGTAGG+TGG | + | chr1.4:50985937-50985956 | None:intergenic | 50.0% |
| ! | CCTGATGGTGTATGTTTCGG+TGG | + | chr1.4:50985553-50985572 | None:intergenic | 50.0% |
| ! | CCTTATCAGGCTGGTCAAGA+TGG | - | chr1.4:50986657-50986676 | MS.gene47378:CDS | 50.0% |
| ! | CGGGTGGACTTTCACACAAA+CGG | - | chr1.4:50985617-50985636 | MS.gene47378:CDS | 50.0% |
| ! | GAAGCGTCCACCTAGTGATA+AGG | - | chr1.4:50986248-50986267 | MS.gene47378:CDS | 50.0% |
| ! | GACAACGGATTTGTAGGTGG+TGG | + | chr1.4:50985598-50985617 | None:intergenic | 50.0% |
| ! | TATAGGAGAAGTGTGAGGCG+AGG | - | chr1.4:50987612-50987631 | MS.gene47378:CDS | 50.0% |
| ! | TTGAAATCCTGGGTTGGGCA+TGG | + | chr1.4:50986583-50986602 | None:intergenic | 50.0% |
| ! | TTTAGTTCCATGCCCAACCC+AGG | - | chr1.4:50986573-50986592 | MS.gene47378:intron | 50.0% |
| !! | AGAGCATCGTTAGCCTGTAG+TGG | - | chr1.4:50987824-50987843 | MS.gene47378:CDS | 50.0% |
| !! | GTAGGTGTTGGATATGTCGG+CGG | + | chr1.4:50986513-50986532 | None:intergenic | 50.0% |
| AACGGCCAGTCAGTGGTAAG+GGG | - | chr1.4:50985635-50985654 | MS.gene47378:CDS | 55.0% | |
| ACACCCTTCCCCTTACCACT+GGG | + | chr1.4:50985646-50985665 | None:intergenic | 55.0% | |
| ACCCGAACAAGTGGTAAGGG+GGG | + | chr1.4:50987711-50987730 | None:intergenic | 55.0% | |
| AGCCTGTAGTGGTAGGGAGT+TGG | - | chr1.4:50987835-50987854 | MS.gene47378:CDS | 55.0% | |
| ATCTCAGCGTCCGCCTTATC+AGG | - | chr1.4:50986644-50986663 | MS.gene47378:CDS | 55.0% | |
| CAAACGGCCAGTCAGTGGTA+AGG | - | chr1.4:50985633-50985652 | MS.gene47378:CDS | 55.0% | |
| CACCCGAACAAGTGGTAAGG+GGG | + | chr1.4:50987712-50987731 | None:intergenic | 55.0% | |
| CCAGTCAGTGGTAAGGGGAA+GGG | - | chr1.4:50985640-50985659 | MS.gene47378:CDS | 55.0% | |
| CCCGATGGTGTAAGTTTCGG+TGG | + | chr1.4:50985844-50985863 | None:intergenic | 55.0% | |
| CCTACAAATCCGTTGTCGGG+TGG | - | chr1.4:50985601-50985620 | MS.gene47378:CDS | 55.0% | |
| CGGGTGGACCTTTACACAAG+CGG | - | chr1.4:50985953-50985972 | MS.gene47378:intron | 55.0% | |
| CTGTTGAGCGTACTCGCAAG+TGG | - | chr1.4:50985284-50985303 | MS.gene47378:CDS | 55.0% | |
| GAAGTATGGGTAGGTGGAGG+CGG | + | chr1.4:50985499-50985518 | None:intergenic | 55.0% | |
| GATGGAGACTGAGAACGGGT+AGG | + | chr1.4:50986417-50986436 | None:intergenic | 55.0% | |
| GATGTCGACGGTGTATACGC+CGG | + | chr1.4:50986486-50986505 | None:intergenic | 55.0% | |
| GCCGGTGGTGCATATGTATG+CGG | + | chr1.4:50986468-50986487 | None:intergenic | 55.0% | |
| GCGAGTAGGCCTAGTAGTAG+TGG | + | chr1.4:50985398-50985417 | None:intergenic | 55.0% | |
| GCGTCCACCTAGTGATAAGG+GGG | - | chr1.4:50986251-50986270 | MS.gene47378:CDS | 55.0% | |
| GGAGGTGGAACATAGGTACG+AGG | + | chr1.4:50986111-50986130 | None:intergenic | 55.0% | |
| GGGGCAACAACATCCTTAGC+AGG | + | chr1.4:50987692-50987711 | None:intergenic | 55.0% | |
| GGTAGGTGGAGGCTGAGTAT+AGG | + | chr1.4:50986400-50986419 | None:intergenic | 55.0% | |
| GGTAGGTGGAGGTGGAACAT+AGG | + | chr1.4:50986118-50986137 | None:intergenic | 55.0% | |
| GGTCAGTGCCCACATTGGAT+AGG | - | chr1.4:50987161-50987180 | MS.gene47378:CDS | 55.0% | |
| GGTGGTGCATAGGCATGTTG+TGG | + | chr1.4:50985535-50985554 | None:intergenic | 55.0% | |
| GGTGGTGCATATGTATGCGG+TGG | + | chr1.4:50986465-50986484 | None:intergenic | 55.0% | |
| GTATGTGCAGTCGTGGGCAT+AGG | + | chr1.4:50985448-50985467 | None:intergenic | 55.0% | |
| TACTACTAGGCCTACTCGCG+AGG | - | chr1.4:50985399-50985418 | MS.gene47378:CDS | 55.0% | |
| TCACACAAACGGCCAGTCAG+TGG | - | chr1.4:50985628-50985647 | MS.gene47378:CDS | 55.0% | |
| TCAGCGGCATAGGTACAAGC+TGG | + | chr1.4:50985342-50985361 | None:intergenic | 55.0% | |
| TCCACCTAGTGATAAGGGGG+AGG | - | chr1.4:50986254-50986273 | MS.gene47378:CDS | 55.0% | |
| TCCTCCCCCTTATCACTAGG+TGG | + | chr1.4:50986258-50986277 | None:intergenic | 55.0% | |
| TGAGAACTGGTAGGTGGAGG+TGG | + | chr1.4:50986126-50986145 | None:intergenic | 55.0% | |
| TGATAAGGCGGACGCTGAGA+TGG | + | chr1.4:50986645-50986664 | None:intergenic | 55.0% | |
| TGCCCCCCTTACCACTTGTT+CGG | - | chr1.4:50987706-50987725 | MS.gene47378:CDS | 55.0% | |
| TGTTGGATATGTCGGCGGTG+CGG | + | chr1.4:50986508-50986527 | None:intergenic | 55.0% | |
| ! | AGTGGTAAGGGGAAGGGTGT+CGG | - | chr1.4:50985646-50985665 | MS.gene47378:CDS | 55.0% |
| ! | CCACCCGACAACGGATTTGT+AGG | + | chr1.4:50985604-50985623 | None:intergenic | 55.0% |
| ! | CCCGACAACGGATTTGTAGG+TGG | + | chr1.4:50985601-50985620 | None:intergenic | 55.0% |
| !! | GTAGGTGGTGGATTCACCGA+TGG | + | chr1.4:50985922-50985941 | None:intergenic | 55.0% |
| AAGCGGCCACCCAGTGGTAA+GGG | - | chr1.4:50985970-50985989 | MS.gene47378:intron | 60.0% | |
| CCACCCAGTGGTAAGGGGAA+GGG | - | chr1.4:50985976-50985995 | MS.gene47378:intron | 60.0% | |
| CCCTTCCCCTTACCACTGAC+TGG | + | chr1.4:50985643-50985662 | None:intergenic | 60.0% | |
| CTGGGTGGCCGCTTGTGTAA+AGG | + | chr1.4:50985964-50985983 | None:intergenic | 60.0% | |
| GACACCCTTCCCCTTACCAC+TGG | + | chr1.4:50985647-50985666 | None:intergenic | 60.0% | |
| GACTGAGAACGGGTAGGTGG+AGG | + | chr1.4:50986411-50986430 | None:intergenic | 60.0% | |
| GATCAGAAGGTTGGAGGCGG+CGG | + | chr1.4:50988084-50988103 | None:intergenic | 60.0% | |
| GCCAGTCAGTGGTAAGGGGA+AGG | - | chr1.4:50985639-50985658 | MS.gene47378:CDS | 60.0% | |
| GCCCCCCTTACCACTTGTTC+GGG | - | chr1.4:50987707-50987726 | MS.gene47378:CDS | 60.0% | |
| GGAGACTGAGAACGGGTAGG+TGG | + | chr1.4:50986414-50986433 | None:intergenic | 60.0% | |
| GGAGGCGGAGCATATGTACG+AGG | + | chr1.4:50985484-50985503 | None:intergenic | 60.0% | |
| GGTGGCAGTGTGTATCCCGA+TGG | + | chr1.4:50985859-50985878 | None:intergenic | 60.0% | |
| GTATGTGCAGTCGTCGGCAC+AGG | + | chr1.4:50986075-50986094 | None:intergenic | 60.0% | |
| TCGCAAGTGGCGCACTCATC+TGG | - | chr1.4:50985297-50985316 | MS.gene47378:CDS | 60.0% | |
| TTACACAAGCGGCCACCCAG+TGG | - | chr1.4:50985964-50985983 | MS.gene47378:intron | 60.0% | |
| AGCGGCCACCCAGTGGTAAG+GGG | - | chr1.4:50985971-50985990 | MS.gene47378:intron | 65.0% | |
| CAAGCGGCCACCCAGTGGTA+AGG | - | chr1.4:50985969-50985988 | MS.gene47378:intron | 65.0% | |
| CAGCGTCCGCCTTATCAGGC+TGG | - | chr1.4:50986648-50986667 | MS.gene47378:CDS | 65.0% | |
| CCCTTCCCCTTACCACTGGG+TGG | + | chr1.4:50985979-50985998 | None:intergenic | 65.0% | |
| GCCACCCAGTGGTAAGGGGA+AGG | - | chr1.4:50985975-50985994 | MS.gene47378:intron | 65.0% | |
| GGCGGACGCTGAGATGGCTT+AGG | + | chr1.4:50986639-50986658 | None:intergenic | 65.0% | |
| GTCGACGGTGTATACGCCGG+TGG | + | chr1.4:50986483-50986502 | None:intergenic | 65.0% | |
| GTCGGCGGTGCGGATGTCGA+CGG | + | chr1.4:50986498-50986517 | None:intergenic | 70.0% | |
| GGAGGCGGCGGTGACGTCCA+TGG | + | chr1.4:50988072-50988091 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 50985214 | 50988159 | 50985214 | ID=MS.gene47378 |
| chr1.4 | mRNA | 50985214 | 50988159 | 50985214 | ID=MS.gene47378.t1;Parent=MS.gene47378 |
| chr1.4 | exon | 50986625 | 50988159 | 50986625 | ID=MS.gene47378.t1.exon1;Parent=MS.gene47378.t1 |
| chr1.4 | CDS | 50986625 | 50988159 | 50986625 | ID=cds.MS.gene47378.t1;Parent=MS.gene47378.t1 |
| chr1.4 | exon | 50986414 | 50986546 | 50986414 | ID=MS.gene47378.t1.exon2;Parent=MS.gene47378.t1 |
| chr1.4 | CDS | 50986414 | 50986546 | 50986414 | ID=cds.MS.gene47378.t1;Parent=MS.gene47378.t1 |
| chr1.4 | exon | 50986039 | 50986317 | 50986039 | ID=MS.gene47378.t1.exon3;Parent=MS.gene47378.t1 |
| chr1.4 | CDS | 50986039 | 50986317 | 50986039 | ID=cds.MS.gene47378.t1;Parent=MS.gene47378.t1 |
| chr1.4 | exon | 50985852 | 50985956 | 50985852 | ID=MS.gene47378.t1.exon4;Parent=MS.gene47378.t1 |
| chr1.4 | CDS | 50985852 | 50985956 | 50985852 | ID=cds.MS.gene47378.t1;Parent=MS.gene47378.t1 |
| chr1.4 | exon | 50985214 | 50985756 | 50985214 | ID=MS.gene47378.t1.exon5;Parent=MS.gene47378.t1 |
| chr1.4 | CDS | 50985214 | 50985756 | 50985214 | ID=cds.MS.gene47378.t1;Parent=MS.gene47378.t1 |
| Gene Sequence |
| Protein sequence |
