AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055634


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 140 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGAGGCCTTACTCATTA+TGG 0.207768 4.1:+35748235 MS.gene055634:CDS
GTCATTCCTCTCCAACCTTA+TGG 0.214853 4.1:+35748216 MS.gene055634:CDS
CTAGGAGAAGTTGGAGAAAA+TGG 0.220183 4.1:+35746245 MS.gene055634:intron
GCAACTATCTTTCGGTATTC+TGG 0.238296 4.1:+35748066 MS.gene055634:CDS
CAGGTGGGACTTTGGGTGTT+TGG 0.241180 4.1:+35747145 MS.gene055634:intron
GCCGTAACTGCTGCCATTCT+TGG 0.244211 4.1:+35747187 MS.gene055634:CDS
GGCTTGGACTCGGGTCTATT+TGG 0.247406 4.1:+35748356 MS.gene055634:CDS
CTCGGCGCTGTCGCAATTCT+AGG 0.249369 4.1:+35745647 MS.gene055634:CDS
GACCATTGGGTGGGTGGATT+GGG 0.256949 4.1:+35746115 MS.gene055634:CDS
CTTGCCAAATGGTGGGGTTA+TGG 0.288623 4.1:+35748301 MS.gene055634:CDS
GCGTTGCGGGATACGCCTTC+AGG 0.306705 4.1:-35745563 None:intergenic
AGACCATTGGGTGGGTGGAT+TGG 0.308188 4.1:+35746114 MS.gene055634:CDS
TGATGCTATGAGTGGTTTAA+TGG 0.314722 4.1:-35745504 None:intergenic
TGGGAGGCCTTACTCATTAT+GGG 0.316934 4.1:+35748236 MS.gene055634:CDS
TTTGTCTGTTGCTACTGCTC+TGG 0.321769 4.1:+35748162 MS.gene055634:CDS
TCATTCCTCTCCAACCTTAT+GGG 0.332451 4.1:+35748217 MS.gene055634:CDS
AGCTGCTATTGTGCCGGGTT+TGG 0.337074 4.1:+35746142 MS.gene055634:CDS
ACACAGTTTGTTGGTGGATT+GGG 0.337833 4.1:+35748034 MS.gene055634:intron
GGCCTTACTCATTATGGGAT+TGG 0.355340 4.1:+35748241 MS.gene055634:CDS
TACACAGTTTGTTGGTGGAT+TGG 0.359432 4.1:+35748033 MS.gene055634:intron
GCCAGTGGAGCTGCTCATAT+TGG 0.359630 4.1:+35748121 MS.gene055634:CDS
GCCGGGTACTTGAACAAATA+TGG 0.386249 4.1:+35747313 MS.gene055634:CDS
GCCTTACTCATTATGGGATT+GGG 0.387958 4.1:+35748242 MS.gene055634:CDS
TTAGCTGTACTCCTCATCTC+AGG 0.388506 4.1:+35747211 MS.gene055634:CDS
CTCTCATGGCAACTATCTTT+CGG 0.393083 4.1:+35748058 MS.gene055634:CDS
GGTAGTTCTTCGTTAGGGTT+AGG 0.393360 4.1:+35745831 MS.gene055634:CDS
GAGTAGTTGCCATGCGTTGC+GGG 0.399074 4.1:-35745576 None:intergenic
TCCAAGAATGGCAGCAGTTA+CGG 0.399210 4.1:-35747188 None:intergenic
CCTTCGGTTTCCGCGAGGGC+TGG 0.400631 4.1:+35745897 MS.gene055634:CDS
GTTAGCTCCGGCGATTCCTT+CGG 0.405730 4.1:+35745881 MS.gene055634:CDS
GTTAGGGTTAGGTTATAGTT+TGG 0.413689 4.1:+35745842 MS.gene055634:CDS
GGCTAAAGCTGCTATTGTGC+CGG 0.419300 4.1:+35746136 MS.gene055634:CDS
AAGCCATTGGCTTGTGGTAA+AGG 0.420303 4.1:+35748383 MS.gene055634:CDS
CTGGGAACTCCACCATTCTT+CGG 0.421438 4.1:+35748181 MS.gene055634:CDS
CTGAGGAGAAGCTTGGATCT+TGG 0.422810 4.1:+35745985 MS.gene055634:CDS
GTGGGACTTTGGGTGTTTGG+AGG 0.424596 4.1:+35747148 MS.gene055634:CDS
GCTTAGCTGAGGGTGTTGCC+TGG 0.426980 4.1:+35747254 MS.gene055634:CDS
TGGGACTTTGGGTGTTTGGA+GGG 0.429501 4.1:+35747149 MS.gene055634:CDS
GTATTGTTAACATTGTCATC+TGG 0.433054 4.1:+35748335 MS.gene055634:CDS
ATTCGATTGGTCAGACCATT+GGG 0.435183 4.1:+35746102 MS.gene055634:CDS
AATTCGATTGGTCAGACCAT+TGG 0.436063 4.1:+35746101 MS.gene055634:CDS
TTGTCTGTTGCTACTGCTCT+GGG 0.438404 4.1:+35748163 MS.gene055634:CDS
TTGTCATCTGGCTTGGACTC+GGG 0.439851 4.1:+35748347 MS.gene055634:CDS
ACTGTTATTACACAGTTTGT+TGG 0.442820 4.1:+35748025 MS.gene055634:intron
GTTAACATTGTCATCTGGCT+TGG 0.443988 4.1:+35748340 MS.gene055634:CDS
TAGGAGAAGTTGGAGAAAAT+GGG 0.445627 4.1:+35746246 MS.gene055634:intron
TCGGTTTCCGCGAGGGCTGG+TGG 0.447113 4.1:+35745900 MS.gene055634:CDS
CGGGATACGCCTTCAGGGGT+TGG 0.447455 4.1:-35745557 None:intergenic
ACAAATATGGTCTCATCTCT+TGG 0.449006 4.1:+35747326 MS.gene055634:CDS
GACCGCTACTCTGTTTCTTA+CGG 0.449963 4.1:+35746296 MS.gene055634:CDS
GCTGCCCTCATTGCAATGGC+CGG 0.451401 4.1:+35747295 MS.gene055634:CDS
CTAAGCTTGCTAGGAGAAGT+TGG 0.452214 4.1:+35746236 MS.gene055634:intron
ACCAATATGAGCAGCTCCAC+TGG 0.452807 4.1:-35748122 None:intergenic
ATTGTCATCTGGCTTGGACT+CGG 0.455077 4.1:+35748346 MS.gene055634:CDS
CTCCACTGGCAAAGAAGTAA+TGG 0.462263 4.1:-35748108 None:intergenic
CAAAACCAACGAACCAAACC+CGG 0.468479 4.1:-35746155 None:intergenic
ACTCTTACTTTGAATTCGAT+TGG 0.469687 4.1:+35746089 MS.gene055634:CDS
TCCCATTACTTCTTTGCCAG+TGG 0.471089 4.1:+35748106 MS.gene055634:CDS
CGTTGCGGGATACGCCTTCA+GGG 0.472773 4.1:-35745562 None:intergenic
CTGCCCTCATTGCAATGGCC+GGG 0.473064 4.1:+35747296 MS.gene055634:CDS
AAAGCCATAACCCCACCATT+TGG 0.475376 4.1:-35748305 None:intergenic
TCAGACTTCTTGTATTTCAT+CGG 0.478693 4.1:+35746025 MS.gene055634:CDS
TCCACTGGCAAAGAAGTAAT+GGG 0.480397 4.1:-35748107 None:intergenic
ACCCAATCCCATAATGAGTA+AGG 0.489058 4.1:-35748243 None:intergenic
TCTATTTGGTGGAAAGCCAT+TGG 0.490613 4.1:+35748370 MS.gene055634:CDS
GTTGCTTGTGGAAGTAATGT+TGG 0.490862 4.1:+35745954 MS.gene055634:CDS
GCGACAGCGCCGAGTGGGAG+TGG 0.492621 4.1:-35745638 None:intergenic
TTTGGCAAGTGGAACATAGT+TGG 0.494233 4.1:-35748287 None:intergenic
CGGTTTCCGCGAGGGCTGGT+GGG 0.496485 4.1:+35745901 MS.gene055634:CDS
CTTAGCTGAGGGTGTTGCCT+GGG 0.499437 4.1:+35747255 MS.gene055634:CDS
GTTATTACACAGTTTGTTGG+TGG 0.503396 4.1:+35748028 MS.gene055634:intron
AATGAGTAAGGCCTCCCATA+AGG 0.503838 4.1:-35748231 None:intergenic
AACACCATGGCTCCGAAGAA+TGG 0.506954 4.1:-35748193 None:intergenic
GCTAAAGCTGCTATTGTGCC+GGG 0.509486 4.1:+35746137 MS.gene055634:CDS
TTGGTGGATTGGGTCTCTCA+TGG 0.513027 4.1:+35748044 MS.gene055634:CDS
AAGTCTCTTTGTGTTGCTTG+TGG 0.513639 4.1:+35745942 MS.gene055634:CDS
AGTAATGGGAGTAGAAGTAG+AGG 0.513935 4.1:-35748093 None:intergenic
TTGGACTCGGGTCTATTTGG+TGG 0.514343 4.1:+35748359 MS.gene055634:CDS
AAACCACGTGAGAGTATCCC+AGG 0.517350 4.1:-35747272 None:intergenic
TAGTGAAGCATTGTTAGCTC+CGG 0.521742 4.1:+35745869 MS.gene055634:CDS
TGGTTCGTTCCAACCCCTGA+AGG 0.522278 4.1:+35745548 MS.gene055634:CDS
GATTCCTTCGGTTTCCGCGA+GGG 0.524260 4.1:+35745893 MS.gene055634:CDS
TCCACCATTCTTCGGAGCCA+TGG 0.524824 4.1:+35748189 MS.gene055634:CDS
TGGTCAGACCATTGGGTGGG+TGG 0.527814 4.1:+35746109 MS.gene055634:CDS
TAGCTGTACTCCTCATCTCA+GGG 0.532808 4.1:+35747212 MS.gene055634:CDS
TGTTCCACTTGCCAAATGGT+GGG 0.537877 4.1:+35748294 MS.gene055634:CDS
ACTATGTTCCACTTGCCAAA+TGG 0.539221 4.1:+35748290 MS.gene055634:CDS
ACCATATTTGTTCAAGTACC+CGG 0.544916 4.1:-35747314 None:intergenic
CAACTACTCGCAATCTTCCT+CGG 0.550700 4.1:+35745590 MS.gene055634:CDS
AGTAAGGCCTCCCATAAGGT+TGG 0.553168 4.1:-35748227 None:intergenic
TCCTCACCGGAGTAATACTC+TGG 0.554653 4.1:+35745528 MS.gene055634:CDS
GTACCCGGCCATTGCAATGA+GGG 0.555519 4.1:-35747299 None:intergenic
GAATTGCGACAGCGCCGAGT+GGG 0.557728 4.1:-35745643 None:intergenic
ACCATGGCTCCGAAGAATGG+TGG 0.558163 4.1:-35748190 None:intergenic
AAGGCGTATCCCGCAACGCA+TGG 0.558343 4.1:+35745567 MS.gene055634:CDS
CGAGTAGTTGCCATGCGTTG+CGG 0.559108 4.1:-35745577 None:intergenic
ATGTTCCACTTGCCAAATGG+TGG 0.562922 4.1:+35748293 MS.gene055634:CDS
GTTTGCTGCCCTCATTGCAA+TGG 0.568959 4.1:+35747291 MS.gene055634:CDS
TCATCTCAGGGGTTGTAACA+TGG 0.568969 4.1:+35747224 MS.gene055634:CDS
TGTGGAAGTAATGTTGGTGA+TGG 0.570062 4.1:+35745960 MS.gene055634:CDS
GAGTACAGCTAATCCAAGAA+TGG 0.571107 4.1:-35747200 None:intergenic
GGCCCTTTACCACAAGCCAA+TGG 0.574870 4.1:-35748386 None:intergenic
GTTCCACTTGCCAAATGGTG+GGG 0.575270 4.1:+35748295 MS.gene055634:CDS
CCAGCCCTCGCGGAAACCGA+AGG 0.575388 4.1:-35745897 None:intergenic
GATGGGACTGAGGAGAAGCT+TGG 0.578401 4.1:+35745978 MS.gene055634:CDS
GCGGAAACCGAAGGAATCGC+CGG 0.582377 4.1:-35745888 None:intergenic
TAACCCCACCATTTGGCAAG+TGG 0.583744 4.1:-35748298 None:intergenic
AGCCCAATCCACCCACCCAA+TGG 0.585241 4.1:-35746117 None:intergenic
AAAGTAAGAGTAGCACATAA+CGG 0.590850 4.1:-35746077 None:intergenic
GTTCAGTCAAACTGTAGTCA+AGG 0.591753 4.1:+35747348 MS.gene055634:CDS
TTCCTCTCCAACCTTATGGG+AGG 0.599715 4.1:+35748220 MS.gene055634:CDS
ATCACACAACCACTCCCACT+CGG 0.602206 4.1:+35745629 MS.gene055634:CDS
GGCCTCCCATAAGGTTGGAG+AGG 0.603882 4.1:-35748222 None:intergenic
ATCTTCCTCGGAACTATCGT+CGG 0.607025 4.1:+35745602 MS.gene055634:CDS
CTCATAGCATCAATCCTCAC+CGG 0.612000 4.1:+35745515 MS.gene055634:CDS
GATTGGTCAGACCATTGGGT+GGG 0.612664 4.1:+35746106 MS.gene055634:CDS
CGATTCCTTCGGTTTCCGCG+AGG 0.617148 4.1:+35745892 MS.gene055634:CDS
GTGGAAGTAATGTTGGTGAT+GGG 0.620357 4.1:+35745961 MS.gene055634:CDS
ATGGAAAGAGTGCTTAGCTG+AGG 0.620669 4.1:+35747243 MS.gene055634:CDS
TAATGTTGGTGATGGGACTG+AGG 0.627098 4.1:+35745968 MS.gene055634:CDS
AGTACCCGGCCATTGCAATG+AGG 0.629202 4.1:-35747300 None:intergenic
CGATTGGTCAGACCATTGGG+TGG 0.629726 4.1:+35746105 MS.gene055634:CDS
ATGTTACAACCCCTGAGATG+AGG 0.630520 4.1:-35747222 None:intergenic
TGGAAAGAGTGCTTAGCTGA+GGG 0.636445 4.1:+35747244 MS.gene055634:CDS
AAATATCCCACCAGCCCTCG+CGG 0.640612 4.1:-35745907 None:intergenic
AGGAGAAGTTGGAGAAAATG+GGG 0.640663 4.1:+35746247 MS.gene055634:intron
GGTGGAAAGCCATTGGCTTG+TGG 0.643800 4.1:+35748377 MS.gene055634:CDS
GTTGCGGGATACGCCTTCAG+GGG 0.648907 4.1:-35745561 None:intergenic
TGCTATGAGTGGTTTAATGG+CGG 0.652212 4.1:-35745501 None:intergenic
AGCTGTACTCCTCATCTCAG+GGG 0.662859 4.1:+35747213 MS.gene055634:CDS
AACGAACCAGAGTATTACTC+CGG 0.667915 4.1:-35745534 None:intergenic
GTGAGGATTGATGCTATGAG+TGG 0.673480 4.1:-35745512 None:intergenic
ACACAAAGAGACTTAACCAA+CGG 0.679129 4.1:-35745933 None:intergenic
TCACAAATTGATACGCAACA+CGG 0.686307 4.1:-35745800 None:intergenic
AGAATTGCGACAGCGCCGAG+TGG 0.695195 4.1:-35745644 None:intergenic
TACCGTAAGAAACAGAGTAG+CGG 0.697217 4.1:-35746298 None:intergenic
TGATTCCGACGATAGTTCCG+AGG 0.697476 4.1:-35745607 None:intergenic
TTGCCTGGGATACTCTCACG+TGG 0.701370 4.1:+35747269 MS.gene055634:CDS
ACCAGAGTATTACTCCGGTG+AGG 0.718515 4.1:-35745529 None:intergenic
GGAGAGGAATGACAACACCA+TGG 0.744875 4.1:-35748206 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAATATACAAAATCAA+CGG - chr4.1:35746184-35746203 None:intergenic 10.0%
!!! TTAAATTTGTTTTCTAAATT+AGG + chr4.1:35746810-35746829 MS.gene055634:intron 10.0%
!! CAAAAAAAAACTAAATTCTA+AGG - chr4.1:35747094-35747113 None:intergenic 15.0%
!! TTAGAAAACAAATTTAAAGA+CGG - chr4.1:35746807-35746826 None:intergenic 15.0%
!!! CTTAGAATTTAGTTTTTTTT+TGG + chr4.1:35747092-35747111 MS.gene055634:intron 15.0%
!! TAGAGTATAAACATGAAATT+GGG + chr4.1:35746365-35746384 MS.gene055634:intron 20.0%
!! TTTAATAAATATTACACTCG+AGG - chr4.1:35747398-35747417 None:intergenic 20.0%
!!! AGTTAACATTTGATTTCAAA+AGG - chr4.1:35746616-35746635 None:intergenic 20.0%
!!! ATTGACTTTTCTTAAAATTG+TGG - chr4.1:35746524-35746543 None:intergenic 20.0%
!!! TTGACTTTTCTTAAAATTGT+GGG - chr4.1:35746523-35746542 None:intergenic 20.0%
! GTAATATTGTATGGTTACTA+TGG - chr4.1:35747928-35747947 None:intergenic 25.0%
! GTAGAGTATAAACATGAAAT+TGG + chr4.1:35746364-35746383 MS.gene055634:intron 25.0%
! GTTAACTGTATATAGTAGAA+TGG + chr4.1:35746629-35746648 MS.gene055634:intron 25.0%
! TAATTACTCAAAAATGTAGC+AGG - chr4.1:35747954-35747973 None:intergenic 25.0%
! TAGAGTATAAGCATGAAATT+GGG + chr4.1:35746439-35746458 MS.gene055634:intron 25.0%
! TATTTATATGTGGATATGCT+TGG + chr4.1:35747792-35747811 MS.gene055634:intron 25.0%
! TCTAGTAAGTAATGATTGAT+CGG + chr4.1:35747634-35747653 MS.gene055634:intron 25.0%
! TGTTTCTCAAATGTTATGTT+GGG + chr4.1:35746655-35746674 MS.gene055634:intron 25.0%
! TTCTTTCATTGACATAATCA+AGG - chr4.1:35747999-35748018 None:intergenic 25.0%
!! ACCAGCTTTTTATGATTATT+TGG + chr4.1:35747601-35747620 MS.gene055634:intron 25.0%
!! CATTTGATTTCAAAAGGTTA+TGG - chr4.1:35746610-35746629 None:intergenic 25.0%
!! TATCAATTTGTGAAGCTTTT+TGG + chr4.1:35745810-35745829 MS.gene055634:CDS 25.0%
!! TTGTTTCTCAAATGTTATGT+TGG + chr4.1:35746654-35746673 MS.gene055634:intron 25.0%
!! TTTTCTTAAAATTGTGGGTT+AGG - chr4.1:35746518-35746537 None:intergenic 25.0%
AAACAAATCAACCATGGAAT+TGG - chr4.1:35745737-35745756 None:intergenic 30.0%
AAAGCTAAACAAATCAACCA+TGG - chr4.1:35745743-35745762 None:intergenic 30.0%
AAAGTAAGAGTAGCACATAA+CGG - chr4.1:35746080-35746099 None:intergenic 30.0%
AATAAATAGCATCTCTTCAG+TGG - chr4.1:35747878-35747897 None:intergenic 30.0%
ACATATAAATACCAGAGGAA+GGG - chr4.1:35747783-35747802 None:intergenic 30.0%
ACTCTTACTTTGAATTCGAT+TGG + chr4.1:35746089-35746108 MS.gene055634:CDS 30.0%
ACTGTTATTACACAGTTTGT+TGG + chr4.1:35748025-35748044 MS.gene055634:intron 30.0%
AGTCAATCTATATGCAAAGT+TGG + chr4.1:35746537-35746556 MS.gene055634:intron 30.0%
GCCAAATAATCATAAAAAGC+TGG - chr4.1:35747605-35747624 None:intergenic 30.0%
GTAGAGTATAAGCATGAAAT+TGG + chr4.1:35746438-35746457 MS.gene055634:intron 30.0%
GTATTGTTAACATTGTCATC+TGG + chr4.1:35748335-35748354 MS.gene055634:CDS 30.0%
TATACCTTGTGTCTTGATTA+AGG + chr4.1:35747044-35747063 MS.gene055634:intron 30.0%
TATCCACATATAAATACCAG+AGG - chr4.1:35747788-35747807 None:intergenic 30.0%
TCAGACTTCTTGTATTTCAT+CGG + chr4.1:35746025-35746044 MS.gene055634:CDS 30.0%
TCCATATTTGCCAGAAATTT+CGG - chr4.1:35746915-35746934 None:intergenic 30.0%
TGAGTGAACTGTAAATCATT+AGG + chr4.1:35746759-35746778 MS.gene055634:intron 30.0%
TTTAAAAAAGATCCGCTACT+CGG - chr4.1:35746996-35747015 None:intergenic 30.0%
! ATTTTCTCATTAGTCGTCAT+AGG - chr4.1:35746273-35746292 None:intergenic 30.0%
! GGTAGATAACTTCACTATTT+TGG + chr4.1:35746460-35746479 MS.gene055634:intron 30.0%
!! GCTAAAGGTTTTATCAAAAC+TGG + chr4.1:35745768-35745787 MS.gene055634:intron 30.0%
!! GGTTTTATCAAAACTGGATT+AGG + chr4.1:35745774-35745793 MS.gene055634:intron 30.0%
!! TTTTTGGTAGTTCTTCGTTA+GGG + chr4.1:35745826-35745845 MS.gene055634:CDS 30.0%
!!! GATTAGTTTTGAAGACCAAT+AGG - chr4.1:35746847-35746866 None:intergenic 30.0%
!!! GTTTAGCTTTTTCTTGCTAA+AGG + chr4.1:35745753-35745772 MS.gene055634:intron 30.0%
!!! GTTTTAATTTTGTCCACTCA+AGG + chr4.1:35747814-35747833 MS.gene055634:intron 30.0%
AAAAGGTTATGGCACAAAAG+TGG - chr4.1:35746599-35746618 None:intergenic 35.0%
AACTGTAAATCATTAGGCCA+TGG + chr4.1:35746765-35746784 MS.gene055634:intron 35.0%
AATGCAACTACTACTAGACA+AGG - chr4.1:35747020-35747039 None:intergenic 35.0%
ACAAATATGGTCTCATCTCT+TGG + chr4.1:35747326-35747345 MS.gene055634:CDS 35.0%
ACACAAAGAGACTTAACCAA+CGG - chr4.1:35745936-35745955 None:intergenic 35.0%
ACCATATTTGTTCAAGTACC+CGG - chr4.1:35747317-35747336 None:intergenic 35.0%
CACATATAAATACCAGAGGA+AGG - chr4.1:35747784-35747803 None:intergenic 35.0%
CAGAAATTTCGGCAATATCA+AGG - chr4.1:35746904-35746923 None:intergenic 35.0%
CTTCCTCTGGTATTTATATG+TGG + chr4.1:35747782-35747801 MS.gene055634:intron 35.0%
CTTGATATTGCCGAAATTTC+TGG + chr4.1:35746902-35746921 MS.gene055634:intron 35.0%
GTTAGGGTTAGGTTATAGTT+TGG + chr4.1:35745842-35745861 MS.gene055634:CDS 35.0%
TACTCAAAAATGTAGCAGGT+TGG - chr4.1:35747950-35747969 None:intergenic 35.0%
TAGGAGAAGTTGGAGAAAAT+GGG + chr4.1:35746246-35746265 MS.gene055634:intron 35.0%
TATTTCAAAACATGCTCCAG+TGG - chr4.1:35747559-35747578 None:intergenic 35.0%
TCACAAATTGATACGCAACA+CGG - chr4.1:35745803-35745822 None:intergenic 35.0%
TCTCTTCAGTGGCAATTATT+AGG - chr4.1:35747867-35747886 None:intergenic 35.0%
TGATGCTATGAGTGGTTTAA+TGG - chr4.1:35745507-35745526 None:intergenic 35.0%
TGGCAATTATTAGGACTCAT+AGG - chr4.1:35747858-35747877 None:intergenic 35.0%
TGGCATCATAAGTTTGTGTT+GGG - chr4.1:35746579-35746598 None:intergenic 35.0%
TTCACCTTAATCAAGACACA+AGG - chr4.1:35747051-35747070 None:intergenic 35.0%
!! AGCAGGTTGGTAATATTGTA+TGG - chr4.1:35747937-35747956 None:intergenic 35.0%
!! CTTTTTGGTAGTTCTTCGTT+AGG + chr4.1:35745825-35745844 MS.gene055634:CDS 35.0%
!! GTTATTACACAGTTTGTTGG+TGG + chr4.1:35748028-35748047 MS.gene055634:intron 35.0%
!!! GGTAGATAGCTTTGCTATTT+TGG + chr4.1:35746386-35746405 MS.gene055634:intron 35.0%
!!! TAGTTTTGAAGACCAATAGG+AGG - chr4.1:35746844-35746863 None:intergenic 35.0%
AAAATGCTGCAACAAAGGGT+AGG - chr4.1:35745700-35745719 None:intergenic 40.0%
AAATGCTGCAACAAAGGGTA+GGG - chr4.1:35745699-35745718 None:intergenic 40.0%
ACCCAATCCCATAATGAGTA+AGG - chr4.1:35748246-35748265 None:intergenic 40.0%
ACTATGTTCCACTTGCCAAA+TGG + chr4.1:35748290-35748309 MS.gene055634:CDS 40.0%
AGGAGAAGTTGGAGAAAATG+GGG + chr4.1:35746247-35746266 MS.gene055634:intron 40.0%
ATGCTGATCAACTCAGAAGT+AGG - chr4.1:35747724-35747743 None:intergenic 40.0%
CACCTGGTAAAATTGAGTGA+CGG - chr4.1:35747131-35747150 None:intergenic 40.0%
CTAGGAGAAGTTGGAGAAAA+TGG + chr4.1:35746245-35746264 MS.gene055634:intron 40.0%
CTCTCATGGCAACTATCTTT+CGG + chr4.1:35748058-35748077 MS.gene055634:CDS 40.0%
GAGTAACGAGTCATTAACCA+TGG - chr4.1:35746785-35746804 None:intergenic 40.0%
GAGTACAGCTAATCCAAGAA+TGG - chr4.1:35747203-35747222 None:intergenic 40.0%
GCAACTATCTTTCGGTATTC+TGG + chr4.1:35748066-35748085 MS.gene055634:CDS 40.0%
GCCTTACTCATTATGGGATT+GGG + chr4.1:35748242-35748261 MS.gene055634:CDS 40.0%
GGCATCATAAGTTTGTGTTG+GGG - chr4.1:35746578-35746597 None:intergenic 40.0%
GTGGCATCATAAGTTTGTGT+TGG - chr4.1:35746580-35746599 None:intergenic 40.0%
GTTAACATTGTCATCTGGCT+TGG + chr4.1:35748340-35748359 MS.gene055634:CDS 40.0%
GTTCAGTCAAACTGTAGTCA+AGG + chr4.1:35747348-35747367 MS.gene055634:CDS 40.0%
GTTGATCAGCATCTGTTTCA+TGG + chr4.1:35747732-35747751 MS.gene055634:intron 40.0%
GTTGCTTGTGGAAGTAATGT+TGG + chr4.1:35745954-35745973 MS.gene055634:CDS 40.0%
TACCGTAAGAAACAGAGTAG+CGG - chr4.1:35746301-35746320 None:intergenic 40.0%
TATAAATACCAGAGGAAGGG+AGG - chr4.1:35747780-35747799 None:intergenic 40.0%
TCAGGACTAGATTTCAACGT+CGG - chr4.1:35746211-35746230 None:intergenic 40.0%
TCATTCCTCTCCAACCTTAT+GGG + chr4.1:35748217-35748236 MS.gene055634:CDS 40.0%
TCCACTGGCAAAGAAGTAAT+GGG - chr4.1:35748110-35748129 None:intergenic 40.0%
TGCTATGAGTGGTTTAATGG+CGG - chr4.1:35745504-35745523 None:intergenic 40.0%
TGGTCATTAGACAGATGTTG+TGG + chr4.1:35746722-35746741 MS.gene055634:intron 40.0%
TGGTTACTATGGTATGCATG+TGG - chr4.1:35747917-35747936 None:intergenic 40.0%
TTGCCTTTCATCTGTTCTCT+GGG + chr4.1:35747461-35747480 MS.gene055634:intron 40.0%
TTTGCCTTTCATCTGTTCTC+TGG + chr4.1:35747460-35747479 MS.gene055634:intron 40.0%
TTTGGCAAGTGGAACATAGT+TGG - chr4.1:35748290-35748309 None:intergenic 40.0%
! AACGAACCAGAGTATTACTC+CGG - chr4.1:35745537-35745556 None:intergenic 40.0%
! AATTCGATTGGTCAGACCAT+TGG + chr4.1:35746101-35746120 MS.gene055634:CDS 40.0%
! AATTTTACCAGGTGGGACTT+TGG + chr4.1:35747137-35747156 MS.gene055634:intron 40.0%
! AGTAATGGGAGTAGAAGTAG+AGG - chr4.1:35748096-35748115 None:intergenic 40.0%
! ATCCGTCACTCAATTTTACC+AGG + chr4.1:35747126-35747145 MS.gene055634:intron 40.0%
! ATTCGATTGGTCAGACCATT+GGG + chr4.1:35746102-35746121 MS.gene055634:CDS 40.0%
! ATTTTACCAGGTGGGACTTT+GGG + chr4.1:35747138-35747157 MS.gene055634:intron 40.0%
! GTCACTCAATTTTACCAGGT+GGG + chr4.1:35747130-35747149 MS.gene055634:intron 40.0%
! TAGTTGGCACCGAAAAATAC+TGG - chr4.1:35748274-35748293 None:intergenic 40.0%
! TCTATTTGGTGGAAAGCCAT+TGG + chr4.1:35748370-35748389 MS.gene055634:CDS 40.0%
! TGGTAAAATTGAGTGACGGA+TGG - chr4.1:35747127-35747146 None:intergenic 40.0%
! TGTGGAAGTAATGTTGGTGA+TGG + chr4.1:35745960-35745979 MS.gene055634:CDS 40.0%
!! AAGTCTCTTTGTGTTGCTTG+TGG + chr4.1:35745942-35745961 MS.gene055634:CDS 40.0%
!! ACACAGTTTGTTGGTGGATT+GGG + chr4.1:35748034-35748053 MS.gene055634:intron 40.0%
!! ATCTGTTCTCTGGGGTAAAA+TGG + chr4.1:35747470-35747489 MS.gene055634:intron 40.0%
!! GCCGAAATTTCTGGCAAATA+TGG + chr4.1:35746911-35746930 MS.gene055634:intron 40.0%
!! GTGGAAGTAATGTTGGTGAT+GGG + chr4.1:35745961-35745980 MS.gene055634:CDS 40.0%
!! TACACAGTTTGTTGGTGGAT+TGG + chr4.1:35748033-35748052 MS.gene055634:intron 40.0%
!! TAGTGAAGCATTGTTAGCTC+CGG + chr4.1:35745869-35745888 MS.gene055634:CDS 40.0%
!! TGGTGGGATATTTTTACCGT+TGG + chr4.1:35745917-35745936 MS.gene055634:CDS 40.0%
!!! GGAACTCTGCTTAGTTTTGA+AGG + chr4.1:35746481-35746500 MS.gene055634:intron 40.0%
AAAGCCATAACCCCACCATT+TGG - chr4.1:35748308-35748327 None:intergenic 45.0%
AAATCAAACCTCCCTTCCTC+TGG + chr4.1:35747769-35747788 MS.gene055634:intron 45.0%
AACTTTGACGTTCCGAGTAG+CGG + chr4.1:35746981-35747000 MS.gene055634:intron 45.0%
AATGAGTAAGGCCTCCCATA+AGG - chr4.1:35748234-35748253 None:intergenic 45.0%
ACCGGAAAATGCTGCAACAA+AGG - chr4.1:35745705-35745724 None:intergenic 45.0%
AGCCATCGCAGTCAAAAACA+TGG - chr4.1:35746051-35746070 None:intergenic 45.0%
ATCAGGCATCTTGGTTCATG+TGG + chr4.1:35747688-35747707 MS.gene055634:intron 45.0%
ATCCAATTTGCATTGCTGGC+TGG + chr4.1:35746702-35746721 MS.gene055634:intron 45.0%
ATCTTCCTCGGAACTATCGT+CGG + chr4.1:35745602-35745621 MS.gene055634:CDS 45.0%
ATGGGAGGCCTTACTCATTA+TGG + chr4.1:35748235-35748254 MS.gene055634:CDS 45.0%
ATGTTACAACCCCTGAGATG+AGG - chr4.1:35747225-35747244 None:intergenic 45.0%
ATGTTCCACTTGCCAAATGG+TGG + chr4.1:35748293-35748312 MS.gene055634:CDS 45.0%
CAAAACCAACGAACCAAACC+CGG - chr4.1:35746158-35746177 None:intergenic 45.0%
CAACTACTCGCAATCTTCCT+CGG + chr4.1:35745590-35745609 MS.gene055634:CDS 45.0%
CAACTTCTCCTAGCAAGCTT+AGG - chr4.1:35746238-35746257 None:intergenic 45.0%
CCGGAAAATGCTGCAACAAA+GGG - chr4.1:35745704-35745723 None:intergenic 45.0%
CTCATAGCATCAATCCTCAC+CGG + chr4.1:35745515-35745534 MS.gene055634:CDS 45.0%
CTCCACTGGCAAAGAAGTAA+TGG - chr4.1:35748111-35748130 None:intergenic 45.0%
GAACTCATGATGACCTTGAG+TGG - chr4.1:35747830-35747849 None:intergenic 45.0%
GAGCATCCAATTTGCATTGC+TGG + chr4.1:35746698-35746717 MS.gene055634:intron 45.0%
GCCGGGTACTTGAACAAATA+TGG + chr4.1:35747313-35747332 MS.gene055634:CDS 45.0%
GCTGTCGCAATTCTAGGTTT+AGG + chr4.1:35745653-35745672 MS.gene055634:intron 45.0%
GGCCTTACTCATTATGGGAT+TGG + chr4.1:35748241-35748260 MS.gene055634:CDS 45.0%
GGTAGTTCTTCGTTAGGGTT+AGG + chr4.1:35745831-35745850 MS.gene055634:CDS 45.0%
GTCATTCCTCTCCAACCTTA+TGG + chr4.1:35748216-35748235 MS.gene055634:CDS 45.0%
GTGAGGATTGATGCTATGAG+TGG - chr4.1:35745515-35745534 None:intergenic 45.0%
GTGTTCTCTTGGAACACATC+AGG + chr4.1:35747671-35747690 MS.gene055634:intron 45.0%
GTTTCGGTGATCCAATTCCA+TGG + chr4.1:35745723-35745742 MS.gene055634:intron 45.0%
TAAGTTTGTGTTGGGGTGAG+TGG - chr4.1:35746571-35746590 None:intergenic 45.0%
TACCCCAGAGAACAGATGAA+AGG - chr4.1:35747467-35747486 None:intergenic 45.0%
TAGCTGTACTCCTCATCTCA+GGG + chr4.1:35747212-35747231 MS.gene055634:CDS 45.0%
TCAAAACATGCTCCAGTGGT+TGG - chr4.1:35747555-35747574 None:intergenic 45.0%
TCAGGCATCTTGGTTCATGT+GGG + chr4.1:35747689-35747708 MS.gene055634:intron 45.0%
TCATCTCAGGGGTTGTAACA+TGG + chr4.1:35747224-35747243 MS.gene055634:CDS 45.0%
TCCAAGAATGGCAGCAGTTA+CGG - chr4.1:35747191-35747210 None:intergenic 45.0%
TCCCATTACTTCTTTGCCAG+TGG + chr4.1:35748106-35748125 MS.gene055634:CDS 45.0%
TGCCTTTCATCTGTTCTCTG+GGG + chr4.1:35747462-35747481 MS.gene055634:intron 45.0%
TGGAATTGGATCACCGAAAC+CGG - chr4.1:35745723-35745742 None:intergenic 45.0%
TGGGAGGCCTTACTCATTAT+GGG + chr4.1:35748236-35748255 MS.gene055634:CDS 45.0%
TGTTCCACTTGCCAAATGGT+GGG + chr4.1:35748294-35748313 MS.gene055634:CDS 45.0%
TGTTTGACCAAACCAACCAC+TGG + chr4.1:35747540-35747559 MS.gene055634:intron 45.0%
TTAGCTGTACTCCTCATCTC+AGG + chr4.1:35747211-35747230 MS.gene055634:CDS 45.0%
TTGGAACACATCAGGCATCT+TGG + chr4.1:35747679-35747698 MS.gene055634:intron 45.0%
TTGTCTGTTGCTACTGCTCT+GGG + chr4.1:35748163-35748182 MS.gene055634:CDS 45.0%
TTTGTCTGTTGCTACTGCTC+TGG + chr4.1:35748162-35748181 MS.gene055634:CDS 45.0%
! CCCTTTGTTGCAGCATTTTC+CGG + chr4.1:35745701-35745720 MS.gene055634:intron 45.0%
! CGTCACTCAATTTTACCAGG+TGG + chr4.1:35747129-35747148 MS.gene055634:intron 45.0%
! GACCGCTACTCTGTTTCTTA+CGG + chr4.1:35746296-35746315 MS.gene055634:CDS 45.0%
! GGGTCAGCTCCAGTATTTTT+CGG + chr4.1:35748262-35748281 MS.gene055634:CDS 45.0%
! GTTGCAGCATTTTCCGGTTT+CGG + chr4.1:35745707-35745726 MS.gene055634:intron 45.0%
! TGCAACAAAGGGTAGGGTTT+TGG - chr4.1:35745693-35745712 None:intergenic 45.0%
!! ATGGAAAGAGTGCTTAGCTG+AGG + chr4.1:35747243-35747262 MS.gene055634:CDS 45.0%
!! ATTGTCATCTGGCTTGGACT+CGG + chr4.1:35748346-35748365 MS.gene055634:CDS 45.0%
!! CTAAGCTTGCTAGGAGAAGT+TGG + chr4.1:35746236-35746255 MS.gene055634:intron 45.0%
!! TAATGTTGGTGATGGGACTG+AGG + chr4.1:35745968-35745987 MS.gene055634:CDS 45.0%
!! TGGAAAGAGTGCTTAGCTGA+GGG + chr4.1:35747244-35747263 MS.gene055634:CDS 45.0%
!! ATTTATTTAATTGTAATAAT+AGG + chr4.1:35747891-35747910 MS.gene055634:intron 5.0%
AACACCATGGCTCCGAAGAA+TGG - chr4.1:35748196-35748215 None:intergenic 50.0%
ACCAATATGAGCAGCTCCAC+TGG - chr4.1:35748125-35748144 None:intergenic 50.0%
AGCTGTACTCCTCATCTCAG+GGG + chr4.1:35747213-35747232 MS.gene055634:CDS 50.0%
AGTAAGGCCTCCCATAAGGT+TGG - chr4.1:35748230-35748249 None:intergenic 50.0%
ATCACACAACCACTCCCACT+CGG + chr4.1:35745629-35745648 MS.gene055634:CDS 50.0%
CGCGTCTCAATGCAGTCATA+GGG + chr4.1:35746950-35746969 MS.gene055634:intron 50.0%
CTAGCAAGCTTAGGTGCATC+AGG - chr4.1:35746229-35746248 None:intergenic 50.0%
CTGAGGAGAAGCTTGGATCT+TGG + chr4.1:35745985-35746004 MS.gene055634:CDS 50.0%
CTGGGAACTCCACCATTCTT+CGG + chr4.1:35748181-35748200 MS.gene055634:CDS 50.0%
GACCAGCCAGCAATGCAAAT+TGG - chr4.1:35746707-35746726 None:intergenic 50.0%
GCGTCTCAATGCAGTCATAG+GGG + chr4.1:35746951-35746970 MS.gene055634:intron 50.0%
GCTAAAGCTGCTATTGTGCC+GGG + chr4.1:35746137-35746156 MS.gene055634:CDS 50.0%
GCTTGTGCTGTGTGTTCTCT+TGG + chr4.1:35747660-35747679 MS.gene055634:intron 50.0%
GGACTAGATTTCAACGTCGG+AGG - chr4.1:35746208-35746227 None:intergenic 50.0%
GGAGAGGAATGACAACACCA+TGG - chr4.1:35748209-35748228 None:intergenic 50.0%
GGCAATATCAAGGATCGCGA+CGG - chr4.1:35746894-35746913 None:intergenic 50.0%
GGCTAAAGCTGCTATTGTGC+CGG + chr4.1:35746136-35746155 MS.gene055634:CDS 50.0%
GTTCCACTTGCCAAATGGTG+GGG + chr4.1:35748295-35748314 MS.gene055634:CDS 50.0%
TAACCCCACCATTTGGCAAG+TGG - chr4.1:35748301-35748320 None:intergenic 50.0%
TAGGCTGTGCATCCTCCTAT+TGG + chr4.1:35746829-35746848 MS.gene055634:intron 50.0%
TCCTCACCGGAGTAATACTC+TGG + chr4.1:35745528-35745547 MS.gene055634:CDS 50.0%
TCGCGTCTCAATGCAGTCAT+AGG + chr4.1:35746949-35746968 MS.gene055634:intron 50.0%
TGATTCCGACGATAGTTCCG+AGG - chr4.1:35745610-35745629 None:intergenic 50.0%
TGGGACTTTGGGTGTTTGGA+GGG + chr4.1:35747149-35747168 MS.gene055634:CDS 50.0%
TTCCTCTCCAACCTTATGGG+AGG + chr4.1:35748220-35748239 MS.gene055634:CDS 50.0%
TTGGACTCGGGTCTATTTGG+TGG + chr4.1:35748359-35748378 MS.gene055634:CDS 50.0%
! ACATGCTCCAGTGGTTGGTT+TGG - chr4.1:35747550-35747569 None:intergenic 50.0%
! ACCAGAGTATTACTCCGGTG+AGG - chr4.1:35745532-35745551 None:intergenic 50.0%
! CTGATGCACCTAAGCTTGCT+AGG + chr4.1:35746227-35746246 MS.gene055634:intron 50.0%
! CTTGCCAAATGGTGGGGTTA+TGG + chr4.1:35748301-35748320 MS.gene055634:CDS 50.0%
! GATTGGTCAGACCATTGGGT+GGG + chr4.1:35746106-35746125 MS.gene055634:CDS 50.0%
! GTTTGCTGCCCTCATTGCAA+TGG + chr4.1:35747291-35747310 MS.gene055634:CDS 50.0%
!! AAACCACGTGAGAGTATCCC+AGG - chr4.1:35747275-35747294 None:intergenic 50.0%
!! GGCCATGTTTTTGACTGCGA+TGG + chr4.1:35746046-35746065 MS.gene055634:CDS 50.0%
!! TTGGTGGATTGGGTCTCTCA+TGG + chr4.1:35748044-35748063 MS.gene055634:CDS 50.0%
!! TTGTCATCTGGCTTGGACTC+GGG + chr4.1:35748347-35748366 MS.gene055634:CDS 50.0%
!!! CGGGTTTGGTTCGTTGGTTT+TGG + chr4.1:35746156-35746175 MS.gene055634:intron 50.0%
AAATATCCCACCAGCCCTCG+CGG - chr4.1:35745910-35745929 None:intergenic 55.0%
ACCATGGCTCCGAAGAATGG+TGG - chr4.1:35748193-35748212 None:intergenic 55.0%
AGACCATTGGGTGGGTGGAT+TGG + chr4.1:35746114-35746133 MS.gene055634:CDS 55.0%
AGCTGCTATTGTGCCGGGTT+TGG + chr4.1:35746142-35746161 MS.gene055634:CDS 55.0%
AGTACCCGGCCATTGCAATG+AGG - chr4.1:35747303-35747322 None:intergenic 55.0%
CAAACACCCAAAGTCCCACC+TGG - chr4.1:35747147-35747166 None:intergenic 55.0%
CAGGTGGGACTTTGGGTGTT+TGG + chr4.1:35747145-35747164 MS.gene055634:intron 55.0%
CGAGTAGTTGCCATGCGTTG+CGG - chr4.1:35745580-35745599 None:intergenic 55.0%
GAGTAGTTGCCATGCGTTGC+GGG - chr4.1:35745579-35745598 None:intergenic 55.0%
GATGGGACTGAGGAGAAGCT+TGG + chr4.1:35745978-35745997 MS.gene055634:CDS 55.0%
GATTCCTTCGGTTTCCGCGA+GGG + chr4.1:35745893-35745912 MS.gene055634:CDS 55.0%
GCCAGTGGAGCTGCTCATAT+TGG + chr4.1:35748121-35748140 MS.gene055634:CDS 55.0%
GCCGTAACTGCTGCCATTCT+TGG + chr4.1:35747187-35747206 MS.gene055634:CDS 55.0%
GGCTTGGACTCGGGTCTATT+TGG + chr4.1:35748356-35748375 MS.gene055634:CDS 55.0%
GTACCCGGCCATTGCAATGA+GGG - chr4.1:35747302-35747321 None:intergenic 55.0%
GTGGGACTTTGGGTGTTTGG+AGG + chr4.1:35747148-35747167 MS.gene055634:CDS 55.0%
GTTAGCTCCGGCGATTCCTT+CGG + chr4.1:35745881-35745900 MS.gene055634:CDS 55.0%
TCCACCATTCTTCGGAGCCA+TGG + chr4.1:35748189-35748208 MS.gene055634:CDS 55.0%
TGGTTCGTTCCAACCCCTGA+AGG + chr4.1:35745548-35745567 MS.gene055634:CDS 55.0%
TTGCCTGGGATACTCTCACG+TGG + chr4.1:35747269-35747288 MS.gene055634:CDS 55.0%
! CGATTGGTCAGACCATTGGG+TGG + chr4.1:35746105-35746124 MS.gene055634:CDS 55.0%
! GACCATTGGGTGGGTGGATT+GGG + chr4.1:35746115-35746134 MS.gene055634:CDS 55.0%
! TTGTGCCGGGTTTGGTTCGT+TGG + chr4.1:35746150-35746169 MS.gene055634:intron 55.0%
!! CTTAGCTGAGGGTGTTGCCT+GGG + chr4.1:35747255-35747274 MS.gene055634:CDS 55.0%
!! GGTGGAAAGCCATTGGCTTG+TGG + chr4.1:35748377-35748396 MS.gene055634:CDS 55.0%
AAGGCGTATCCCGCAACGCA+TGG + chr4.1:35745567-35745586 MS.gene055634:CDS 60.0%
AGCCCAATCCACCCACCCAA+TGG - chr4.1:35746120-35746139 None:intergenic 60.0%
CGATTCCTTCGGTTTCCGCG+AGG + chr4.1:35745892-35745911 MS.gene055634:CDS 60.0%
CGTTGCGGGATACGCCTTCA+GGG - chr4.1:35745565-35745584 None:intergenic 60.0%
CTCGGCGCTGTCGCAATTCT+AGG + chr4.1:35745647-35745666 MS.gene055634:CDS 60.0%
CTGCCCTCATTGCAATGGCC+GGG + chr4.1:35747296-35747315 MS.gene055634:CDS 60.0%
GCGGAAACCGAAGGAATCGC+CGG - chr4.1:35745891-35745910 None:intergenic 60.0%
GCTGCCCTCATTGCAATGGC+CGG + chr4.1:35747295-35747314 MS.gene055634:CDS 60.0%
GGCCTCCCATAAGGTTGGAG+AGG - chr4.1:35748225-35748244 None:intergenic 60.0%
GTTGCGGGATACGCCTTCAG+GGG - chr4.1:35745564-35745583 None:intergenic 60.0%
TGGTCAGACCATTGGGTGGG+TGG + chr4.1:35746109-35746128 MS.gene055634:CDS 60.0%
! AGAATTGCGACAGCGCCGAG+TGG - chr4.1:35745647-35745666 None:intergenic 60.0%
! GAATTGCGACAGCGCCGAGT+GGG - chr4.1:35745646-35745665 None:intergenic 60.0%
!! GCTTAGCTGAGGGTGTTGCC+TGG + chr4.1:35747254-35747273 MS.gene055634:CDS 60.0%
CGGGATACGCCTTCAGGGGT+TGG - chr4.1:35745560-35745579 None:intergenic 65.0%
GCGTTGCGGGATACGCCTTC+AGG - chr4.1:35745566-35745585 None:intergenic 65.0%
GTGTTGGGGTGAGTGGCACG+AGG - chr4.1:35746564-35746583 None:intergenic 65.0%
CCAGCCCTCGCGGAAACCGA+AGG - chr4.1:35745900-35745919 None:intergenic 70.0%
CCTTCGGTTTCCGCGAGGGC+TGG + chr4.1:35745897-35745916 MS.gene055634:CDS 70.0%
TCGGTTTCCGCGAGGGCTGG+TGG + chr4.1:35745900-35745919 MS.gene055634:CDS 70.0%
! CGGTTTCCGCGAGGGCTGGT+GGG + chr4.1:35745901-35745920 MS.gene055634:CDS 70.0%
! GCGACAGCGCCGAGTGGGAG+TGG - chr4.1:35745641-35745660 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 35745498 35748402 35745498 ID=MS.gene055634
chr4.1 mRNA 35745498 35748402 35745498 ID=MS.gene055634.t1;Parent=MS.gene055634
chr4.1 exon 35745498 35745668 35745498 ID=MS.gene055634.t1.exon1;Parent=MS.gene055634.t1
chr4.1 CDS 35745498 35745668 35745498 ID=cds.MS.gene055634.t1;Parent=MS.gene055634.t1
chr4.1 exon 35745796 35746163 35745796 ID=MS.gene055634.t1.exon2;Parent=MS.gene055634.t1
chr4.1 CDS 35745796 35746163 35745796 ID=cds.MS.gene055634.t1;Parent=MS.gene055634.t1
chr4.1 exon 35746249 35746317 35746249 ID=MS.gene055634.t1.exon3;Parent=MS.gene055634.t1
chr4.1 CDS 35746249 35746317 35746249 ID=cds.MS.gene055634.t1;Parent=MS.gene055634.t1
chr4.1 exon 35747148 35747369 35747148 ID=MS.gene055634.t1.exon4;Parent=MS.gene055634.t1
chr4.1 CDS 35747148 35747369 35747148 ID=cds.MS.gene055634.t1;Parent=MS.gene055634.t1
chr4.1 exon 35748040 35748402 35748040 ID=MS.gene055634.t1.exon5;Parent=MS.gene055634.t1
chr4.1 CDS 35748040 35748402 35748040 ID=cds.MS.gene055634.t1;Parent=MS.gene055634.t1
Gene Sequence

>MS.gene055634

GCGCCGCCATTAAACCACTCATAGCATCAATCCTCACCGGAGTAATACTCTGGTTCGTTCCAACCCCTGAAGGCGTATCCCGCAACGCATGGCAACTACTCGCAATCTTCCTCGGAACTATCGTCGGAATCATCACACAACCACTCCCACTCGGCGCTGTCGCAATTCTAGGTTTAGGAGTTTCAGTTCTCACCAAAACCCTACCCTTTGTTGCAGCATTTTCCGGTTTCGGTGATCCAATTCCATGGTTGATTTGTTTAGCTTTTTCTTGCTAAAGGTTTTATCAAAACTGGATTAGGTAACCGTGTTGCGTATCAATTTGTGAAGCTTTTTGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTTAGTGAAGCATTGTTAGCTCCGGCGATTCCTTCGGTTTCCGCGAGGGCTGGTGGGATATTTTTACCGTTGGTTAAGTCTCTTTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGGACTGAGGAGAAGCTTGGATCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCATCGGCCATGTTTTTGACTGCGATGGCTGCGAATCCGTTATGTGCTACTCTTACTTTGAATTCGATTGGTCAGACCATTGGGTGGGTGGATTGGGCTAAAGCTGCTATTGTGCCGGGTTTGGTTCGTTGGTTTTGGTGCCGTTGATTTTGTATATTATTTATCCTCCGACGTTGAAATCTAGTCCTGATGCACCTAAGCTTGCTAGGAGAAGTTGGAGAAAATGGGGCCTATGACGACTAATGAGAAAATTATGACCGCTACTCTGTTTCTTACGGTAATCAGTCTGCGCACTTTATCTGTCTAATATAATGTGTTTTGTTGTAGAGTATAAACATGAAATTGGGTAGATAGCTTTGCTATTTTGGAACTGTGTTTGTAGATGTTACATAGTTGTGTAGAGTATAAGCATGAAATTGGGTAGATAACTTCACTATTTTGGAACTCTGCTTAGTTTTGAAGGATTGAGTTAGACCTAACCCACAATTTTAAGAAAAGTCAATCTATATGCAAAGTTGGTCCTCGTGCCACTCACCCCAACACAAACTTATGATGCCACTTTTGTGCCATAACCTTTTGAAATCAAATGTTAACTGTATATAGTAGAATGGTTTTGTTTCTCAAATGTTATGTTGGGACTTTTATGCTTATTGAGTTGAGCATCCAATTTGCATTGCTGGCTGGTCATTAGACAGATGTTGTGGTTTTGCTTTTTAGCTGAGTGAACTGTAAATCATTAGGCCATGGTTAATGACTCGTTACTCCGTCTTTAAATTTGTTTTCTAAATTAGGCTGTGCATCCTCCTATTGGTCTTCAAAACTAATCATTTAGTAGCAAGTTTTTAAATCTCCGTCGCGATCCTTGATATTGCCGAAATTTCTGGCAAATATGGATGATGCGATCACGATCGCGTCTCAATGCAGTCATAGGGGCGTAAAAAACTTTGACGTTCCGAGTAGCGGATCTTTTTTAAAACCTTGTCTAGTAGTAGTTGCATTGATGTATACCTTGTGTCTTGATTAAGGTGAATACAGAGTAGTACTTTAATGCCTTAGAATTTAGTTTTTTTTTGGTGACTTATTCCATCCGTCACTCAATTTTACCAGGTGGGACTTTGGGTGTTTGGAGGGCTTCTTAATATAGATGCCGTAACTGCTGCCATTCTTGGATTAGCTGTACTCCTCATCTCAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCCGGGTACTTGAACAAATATGGTCTCATCTCTTGGTTCAGTCAAACTGTAGTCAAGGTATATTTCATGTCTCATCTTTCTACCTCGAGTGTAATATTTATTAAACTTTACTTATGCTGCTTCTGATGATCGTTGATCTTCAGTTCTTTTGCCTTTCATCTGTTCTCTGGGGTAAAATGGTGAATGCATGATTTTTTGTTTAATTTATTCATACTATTTTTACTAGTTGTTTGACCAAACCAACCACTGGAGCATGTTTTGAAATACTCAGAAGCAAATAAGCTTTCAACCAGCTTTTTATGATTATTTGGCATACATGCATCTAGTAAGTAATGATTGATCGGCATGCTTGTGCTGTGTGTTCTCTTGGAACACATCAGGCATCTTGGTTCATGTGGGTGCTTTATTCCTACTTCTGAGTTGATCAGCATCTGTTTCATGGTCAAAGCATATACTAAATCAAACCTCCCTTCCTCTGGTATTTATATGTGGATATGCTTGGTTTTAATTTTGTCCACTCAAGGTCATCATGAGTTCTAAGTCCTATGAGTCCTAATAATTGCCACTGAAGAGATGCTATTTATTTAATTGTAATAATAGGCCACATGCATACCATAGTAACCATACAATATTACCAACCTGCTACATTTTTGAGTAATTATTGAAACAATTTTATTTATATACCTTGATTATGTCAATGAAAGAATTTGCTACTGTTATTACACAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTCGGTATTCTGGTTCTCCTCTACTTCTACTCCCATTACTTCTTTGCCAGTGGAGCTGCTCATATTGGTGCTATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGAACTCCACCATTCTTCGGAGCCATGGTGTTGTCATTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTATTTTTCGGTGCCAACTATGTTCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTTAACATTGTCATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA

Protein sequence

>MS.gene055634.t1

APPLNHSUHQSSPEUYSGSFQPLKAYPATHGNYSQSSSELSSESSHNHSHSALSQFUVTVLRINLUSFLVVLRUGUVIVWFLVKHCULRRFLRFPRGLVGYFYRWLSLFVLLVEVMLVMGLRRSLDLGUCLLVFRLLVFHRPCFULRWLRIRYVLLLLUIRLVRPLGGWIGLKLLLCRVWRSWRKWGLURLMRKLUPLLCFLRWDFGCLEGFLIUMPULLPFLDULYSSSQGLUHGKSAULRVLPGILSRGLLPSLQWPGTUTNMVSSLGSVKLUSSLLVDWVSHGNYLSVFWFSSTSTPITSLPVELLILVLCLLHFCLLLLLWELHHSSEPWCCHSSPTLWEALLIMGLGQLQYFSVPTMFHLPNGGVMALLLVLLTLSSGLDSGLFGGKPLACG