Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47804.t1 | XP_003597730.1 | 95.9 | 171 | 6 | 1 | 1 | 170 | 1 | 171 | 3.10E-91 | 344.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47804.t1 | Q9M815 | 64.0 | 150 | 53 | 1 | 21 | 170 | 42 | 190 | 3.1e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47804.t1 | Q2HU50 | 95.9 | 171 | 6 | 1 | 1 | 170 | 1 | 171 | 2.2e-91 | 344.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024742 | MS.gene47804 | PPI |
| MS.gene21721 | MS.gene47804 | PPI |
| MS.gene058139 | MS.gene47804 | PPI |
| MS.gene21902 | MS.gene47804 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47804.t1 | MTR_2g101660 | 95.906 | 171 | 6 | 1 | 1 | 170 | 1 | 171 | 2.24e-123 | 344 |
| MS.gene47804.t1 | MTR_2g101660 | 97.561 | 123 | 3 | 0 | 48 | 170 | 1 | 123 | 3.08e-89 | 256 |
| MS.gene47804.t1 | MTR_4g086330 | 40.458 | 131 | 78 | 0 | 32 | 162 | 64 | 194 | 1.52e-29 | 107 |
| MS.gene47804.t1 | MTR_8g104890 | 34.911 | 169 | 107 | 1 | 2 | 170 | 4 | 169 | 3.43e-28 | 103 |
| MS.gene47804.t1 | MTR_8g104870 | 38.938 | 113 | 69 | 0 | 32 | 144 | 52 | 164 | 1.78e-26 | 99.4 |
| MS.gene47804.t1 | MTR_4g086320 | 42.149 | 121 | 66 | 1 | 25 | 141 | 40 | 160 | 1.82e-26 | 98.6 |
| MS.gene47804.t1 | MTR_1g075550 | 46.903 | 113 | 59 | 1 | 32 | 144 | 12 | 123 | 1.01e-25 | 95.9 |
| MS.gene47804.t1 | MTR_5g017650 | 37.931 | 116 | 69 | 1 | 32 | 144 | 52 | 167 | 6.67e-25 | 95.5 |
| MS.gene47804.t1 | MTR_6g084940 | 37.795 | 127 | 74 | 2 | 20 | 142 | 2 | 127 | 9.39e-23 | 88.6 |
| MS.gene47804.t1 | MTR_8g104830 | 35.172 | 145 | 82 | 4 | 25 | 161 | 2 | 142 | 8.07e-22 | 86.3 |
| MS.gene47804.t1 | MTR_5g008240 | 28.889 | 135 | 77 | 2 | 20 | 137 | 29 | 161 | 4.38e-14 | 67.0 |
| MS.gene47804.t1 | MTR_5g008240 | 28.889 | 135 | 77 | 2 | 20 | 137 | 95 | 227 | 1.61e-13 | 66.6 |
| MS.gene47804.t1 | MTR_5g008240 | 26.531 | 147 | 89 | 2 | 8 | 137 | 59 | 203 | 1.82e-13 | 66.2 |
| MS.gene47804.t1 | MTR_5g022670 | 30.714 | 140 | 74 | 3 | 32 | 168 | 295 | 414 | 3.18e-12 | 63.9 |
| MS.gene47804.t1 | MTR_2g011490 | 28.571 | 140 | 68 | 6 | 32 | 144 | 76 | 210 | 3.67e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47804.t1 | AT1G52200 | 63.576 | 151 | 52 | 2 | 21 | 170 | 42 | 190 | 5.83e-72 | 215 |
| MS.gene47804.t1 | AT1G52200 | 65.891 | 129 | 44 | 0 | 21 | 149 | 42 | 170 | 3.85e-65 | 197 |
| MS.gene47804.t1 | AT1G49030 | 44.898 | 147 | 79 | 1 | 22 | 168 | 78 | 222 | 1.08e-36 | 126 |
| MS.gene47804.t1 | AT3G18470 | 47.788 | 113 | 59 | 0 | 32 | 144 | 5 | 117 | 1.50e-36 | 123 |
| MS.gene47804.t1 | AT3G18460 | 41.606 | 137 | 72 | 2 | 32 | 168 | 54 | 182 | 1.02e-34 | 120 |
| MS.gene47804.t1 | AT3G18450 | 40.559 | 143 | 79 | 3 | 26 | 168 | 46 | 182 | 1.82e-32 | 114 |
| MS.gene47804.t1 | AT1G58320 | 51.327 | 113 | 53 | 2 | 32 | 143 | 17 | 128 | 3.33e-31 | 110 |
| MS.gene47804.t1 | AT1G68630 | 40.541 | 111 | 65 | 1 | 32 | 142 | 29 | 138 | 5.24e-27 | 100 |
| MS.gene47804.t1 | AT1G14870 | 38.843 | 121 | 74 | 0 | 32 | 152 | 16 | 136 | 6.85e-27 | 99.4 |
| MS.gene47804.t1 | AT5G35525 | 35.252 | 139 | 88 | 1 | 32 | 170 | 16 | 152 | 8.06e-27 | 99.4 |
| MS.gene47804.t1 | AT1G14880 | 38.053 | 113 | 70 | 0 | 32 | 144 | 15 | 127 | 2.79e-24 | 92.8 |
| MS.gene47804.t1 | AT1G14870 | 40.000 | 110 | 66 | 0 | 32 | 141 | 16 | 125 | 7.06e-24 | 91.7 |
| MS.gene47804.t1 | AT1G68610 | 37.324 | 142 | 84 | 3 | 32 | 170 | 19 | 158 | 1.13e-20 | 83.6 |
| MS.gene47804.t1 | AT2G40935 | 32.479 | 117 | 62 | 2 | 32 | 132 | 47 | 162 | 4.01e-16 | 72.4 |
| MS.gene47804.t1 | AT2G40935 | 32.479 | 117 | 62 | 2 | 32 | 132 | 47 | 162 | 4.01e-16 | 72.4 |
| MS.gene47804.t1 | AT2G40935 | 32.479 | 117 | 62 | 2 | 32 | 132 | 47 | 162 | 4.01e-16 | 72.4 |
| MS.gene47804.t1 | AT2G40935 | 32.479 | 117 | 62 | 2 | 32 | 132 | 47 | 162 | 4.01e-16 | 72.4 |
| MS.gene47804.t1 | AT2G40935 | 32.479 | 117 | 62 | 2 | 32 | 132 | 47 | 162 | 4.01e-16 | 72.4 |
| MS.gene47804.t1 | AT2G40935 | 32.381 | 105 | 54 | 2 | 44 | 132 | 48 | 151 | 1.84e-12 | 62.8 |
| MS.gene47804.t1 | AT2G40935 | 34.343 | 99 | 48 | 2 | 50 | 132 | 41 | 138 | 6.30e-12 | 60.8 |
| MS.gene47804.t1 | AT2G40935 | 34.343 | 99 | 48 | 2 | 50 | 132 | 41 | 138 | 6.30e-12 | 60.8 |
| MS.gene47804.t1 | AT2G40935 | 34.343 | 99 | 48 | 2 | 50 | 132 | 41 | 138 | 6.30e-12 | 60.8 |
| MS.gene47804.t1 | AT4G35920 | 30.714 | 140 | 74 | 4 | 32 | 168 | 300 | 419 | 2.82e-11 | 61.2 |
| MS.gene47804.t1 | AT4G35920 | 30.714 | 140 | 74 | 4 | 32 | 168 | 300 | 419 | 2.82e-11 | 61.2 |
| MS.gene47804.t1 | AT4G35920 | 30.714 | 140 | 74 | 4 | 32 | 168 | 300 | 419 | 2.82e-11 | 61.2 |
| MS.gene47804.t1 | AT4G35920 | 30.714 | 140 | 74 | 4 | 32 | 168 | 300 | 419 | 2.82e-11 | 61.2 |
| MS.gene47804.t1 | AT4G35920 | 30.714 | 140 | 74 | 4 | 32 | 168 | 300 | 419 | 2.82e-11 | 61.2 |
Find 39 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTGCACTCAATGGATTA+TGG | 0.362744 | 2.1:+3471625 | MS.gene47804:CDS |
| AGAAGATATTACCATTTGTT+TGG | 0.364288 | 2.1:-3466425 | None:intergenic |
| TTGTGCACTCAATGGATTAT+GGG | 0.371170 | 2.1:+3471626 | MS.gene47804:CDS |
| GTTAAGGAAGAAGTATGATT+TGG | 0.371388 | 2.1:+3471667 | MS.gene47804:CDS |
| TTCAGAGAGCTCAAAATTAG+AGG | 0.383494 | 2.1:+3471755 | MS.gene47804:CDS |
| ATAATGTAAGGTTGCCATCT+TGG | 0.416334 | 2.1:+3471572 | MS.gene47804:intron |
| TGCCTGCTTTGTGCACTCAA+TGG | 0.445012 | 2.1:+3471618 | MS.gene47804:CDS |
| GAGGGAGGATTGTTCAATGT+TGG | 0.461435 | 2.1:-3471938 | None:intergenic |
| AGAGGACTTGACCCTGCTCT+TGG | 0.473756 | 2.1:+3471773 | MS.gene47804:CDS |
| CAAAGTATAGAACAAAGTTA+AGG | 0.474519 | 2.1:+3471651 | MS.gene47804:CDS |
| TGGACAGATAGCAGAAGTAT+TGG | 0.475164 | 2.1:+3471462 | MS.gene47804:CDS |
| GTGAATTAAATACCAAGAGC+AGG | 0.481342 | 2.1:-3471785 | None:intergenic |
| GTAGGGAGTCCATGGAGTAC+TGG | 0.489984 | 2.1:+3466381 | MS.gene47804:CDS |
| CTAATACAATTCAGCAAGTA+GGG | 0.490574 | 2.1:+3466364 | MS.gene47804:CDS |
| GCTAATACAATTCAGCAAGT+AGG | 0.494698 | 2.1:+3466363 | MS.gene47804:CDS |
| TTAGACATGAATTGAGTTGA+GGG | 0.500404 | 2.1:-3471956 | None:intergenic |
| AAGGAAGAAGTATGATTTGG+TGG | 0.502714 | 2.1:+3471670 | MS.gene47804:CDS |
| CTCTCTGAACTCTTGACATA+GGG | 0.516209 | 2.1:-3471741 | None:intergenic |
| ATCCATTGAGTGCACAAAGC+AGG | 0.517834 | 2.1:-3471620 | None:intergenic |
| ACAAAGCAGGCATCATTAGC+AGG | 0.519823 | 2.1:-3471607 | None:intergenic |
| TTCAGCAAGTAGGGAGTCCA+TGG | 0.521718 | 2.1:+3466373 | MS.gene47804:CDS |
| TCATACCTTGAGCCAACAGC+AGG | 0.522584 | 2.1:-3466339 | None:intergenic |
| TGTCATGAGAACCAAACAAA+TGG | 0.529201 | 2.1:+3466414 | MS.gene47804:CDS |
| GCTCTCTGAACTCTTGACAT+AGG | 0.530518 | 2.1:-3471742 | None:intergenic |
| CTTAGACATGAATTGAGTTG+AGG | 0.545566 | 2.1:-3471957 | None:intergenic |
| CAGCAGCAGGAACCTGCTGT+TGG | 0.559449 | 2.1:+3466327 | MS.gene47804:CDS |
| GGAGCAGAAGACTCAGCAGC+AGG | 0.577516 | 2.1:+3466314 | MS.gene47804:CDS |
| GGTAAATGAAGCTTCCAAGA+TGG | 0.581380 | 2.1:-3471586 | None:intergenic |
| AGGAACCTGCTGTTGGCTCA+AGG | 0.588955 | 2.1:+3466334 | MS.gene47804:CDS |
| GACATGAATTGAGTTGAGGG+AGG | 0.606886 | 2.1:-3471953 | None:intergenic |
| TCAAATAGTCCAGTACTCCA+TGG | 0.612473 | 2.1:-3466390 | None:intergenic |
| CAGATAGCAGAAGTATTGGA+TGG | 0.622869 | 2.1:+3471466 | MS.gene47804:CDS |
| CTGAGTCTTCTGCTCCTCAG+TGG | 0.624099 | 2.1:-3466307 | None:intergenic |
| TGAATTAAATACCAAGAGCA+GGG | 0.629149 | 2.1:-3471784 | None:intergenic |
| ATCTGTCCAAATGTTACACA+AGG | 0.643300 | 2.1:-3471448 | None:intergenic |
| TGAGAAATCACATCTGAATG+TGG | 0.657682 | 2.1:-3471698 | None:intergenic |
| ATAGCAGAAGTATTGGATGG+TGG | 0.672429 | 2.1:+3471469 | MS.gene47804:CDS |
| AAGGGAGATGCAGACCACTG+AGG | 0.731299 | 2.1:+3466293 | None:intergenic |
| TCTTGACATAGGGAACAACA+AGG | 0.757057 | 2.1:-3471731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTATTTAATTAAATACA+TGG | - | chr2.1:3471523-3471542 | None:intergenic | 10.0% |
| !!! | TATATATACCTTTTTTTATA+TGG | + | chr2.1:3471398-3471417 | MS.gene47804:intron | 10.0% |
| !! | AAAATTTATTCTAATAACTG+CGG | + | chr2.1:3469929-3469948 | MS.gene47804:intron | 15.0% |
| !! | AAGATTAGAAATTAGAAATT+TGG | - | chr2.1:3467123-3467142 | None:intergenic | 15.0% |
| !! | AGATTAGAAATTAGAAATTT+GGG | - | chr2.1:3467122-3467141 | None:intergenic | 15.0% |
| !! | AGGTTATTATAAAAATTAAG+CGG | + | chr2.1:3469841-3469860 | MS.gene47804:intron | 15.0% |
| !! | ATTAAACGCAAATAAATTAA+AGG | - | chr2.1:3470819-3470838 | None:intergenic | 15.0% |
| !! | ATTTAATACACAATTCTATT+TGG | - | chr2.1:3468921-3468940 | None:intergenic | 15.0% |
| !! | TATTGAAATCTATAATGAAA+TGG | + | chr2.1:3469003-3469022 | MS.gene47804:intron | 15.0% |
| !! | TTAAGTTTAACTAATACTTA+TGG | + | chr2.1:3469678-3469697 | MS.gene47804:intron | 15.0% |
| !! | TTCTTTATTATTAATACTGA+CGG | - | chr2.1:3466763-3466782 | None:intergenic | 15.0% |
| !! | TTGTTAATTGTAATAATGTA+AGG | + | chr2.1:3471560-3471579 | MS.gene47804:intron | 15.0% |
| !! | TTTATTCATCAAATATAAAG+TGG | - | chr2.1:3471813-3471832 | None:intergenic | 15.0% |
| !!! | AAATAGAGTGTTTTATTTAT+AGG | + | chr2.1:3470328-3470347 | MS.gene47804:intron | 15.0% |
| !!! | AATTTTTAGCAAATATTGAA+AGG | - | chr2.1:3469915-3469934 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTATAATAACCT+CGG | - | chr2.1:3469841-3469860 | None:intergenic | 15.0% |
| !!! | GTTTTATTTATAGGTTATAT+TGG | + | chr2.1:3470337-3470356 | MS.gene47804:intron | 15.0% |
| !!! | TTTTTAAATAACAACATTAC+TGG | - | chr2.1:3466909-3466928 | None:intergenic | 15.0% |
| !! | AAAGAAACAAATTGTAAACA+TGG | + | chr2.1:3469750-3469769 | MS.gene47804:intron | 20.0% |
| !! | AATGAAAATGAGTTAAGTTA+CGG | - | chr2.1:3468532-3468551 | None:intergenic | 20.0% |
| !! | AGAAAAAACTTGATGAAATT+TGG | + | chr2.1:3466534-3466553 | MS.gene47804:intron | 20.0% |
| !! | ATAGATATGTATATGAAACT+TGG | + | chr2.1:3469402-3469421 | MS.gene47804:intron | 20.0% |
| !! | ATGTAACATAATAAAAAAGG+AGG | + | chr2.1:3470872-3470891 | MS.gene47804:intron | 20.0% |
| !! | GTGATGTAACATAATAAAAA+AGG | + | chr2.1:3470869-3470888 | MS.gene47804:intron | 20.0% |
| !! | TAAATGTGTGTTTACATTAT+TGG | - | chr2.1:3466817-3466836 | None:intergenic | 20.0% |
| !! | TACTATTTCAATTAATCAAG+TGG | - | chr2.1:3470670-3470689 | None:intergenic | 20.0% |
| !! | TCTACAAAATATACAAATCA+CGG | - | chr2.1:3469138-3469157 | None:intergenic | 20.0% |
| !! | TTATTATAAAAATTAAGCGG+AGG | + | chr2.1:3469844-3469863 | MS.gene47804:intron | 20.0% |
| !! | TTATTTATAGGTTATATTGG+TGG | + | chr2.1:3470340-3470359 | MS.gene47804:intron | 20.0% |
| !! | TTCTATATAGAAAATTCCAA+AGG | - | chr2.1:3467617-3467636 | None:intergenic | 20.0% |
| !! | TTTATATTCAGTTGAATGTT+TGG | + | chr2.1:3468743-3468762 | MS.gene47804:intron | 20.0% |
| !! | TTTGAATTGGTTAGTAAATT+GGG | - | chr2.1:3466602-3466621 | None:intergenic | 20.0% |
| !!! | AAATGTATGATGTCTTTTTA+AGG | + | chr2.1:3469555-3469574 | MS.gene47804:intron | 20.0% |
| !!! | AGATTAGAATTTGAGTTTTA+GGG | - | chr2.1:3467093-3467112 | None:intergenic | 20.0% |
| !!! | GATTTGTATATTTTGTAGAA+TGG | + | chr2.1:3469139-3469158 | MS.gene47804:intron | 20.0% |
| !!! | TTCTTTTTTTGCTTTAAGAT+GGG | + | chr2.1:3468501-3468520 | MS.gene47804:intron | 20.0% |
| !!! | TTTCTTTTTTTGCTTTAAGA+TGG | + | chr2.1:3468500-3468519 | MS.gene47804:intron | 20.0% |
| !!! | TTTTGAATTGGTTAGTAAAT+TGG | - | chr2.1:3466603-3466622 | None:intergenic | 20.0% |
| ! | AAAACCAACAAATGAAATTG+TGG | + | chr2.1:3470157-3470176 | MS.gene47804:intron | 25.0% |
| ! | AAAAGAAAAACACGATTCTA+AGG | - | chr2.1:3467321-3467340 | None:intergenic | 25.0% |
| ! | AAACAAACTAAGTAGTTCAA+TGG | - | chr2.1:3466462-3466481 | None:intergenic | 25.0% |
| ! | AAACGAGTTTATGCATTTAT+AGG | + | chr2.1:3469336-3469355 | MS.gene47804:intron | 25.0% |
| ! | AAGAACAGAGATTAAAAGAT+AGG | - | chr2.1:3470092-3470111 | None:intergenic | 25.0% |
| ! | AATTAAATACATGGTGAGTT+GGG | - | chr2.1:3471514-3471533 | None:intergenic | 25.0% |
| ! | AATTCAAAATTGCATTACTG+GGG | + | chr2.1:3466614-3466633 | MS.gene47804:intron | 25.0% |
| ! | AGAAGATATTACCATTTGTT+TGG | - | chr2.1:3466428-3466447 | None:intergenic | 25.0% |
| ! | AGGTGATATTAAAAGGATTT+AGG | - | chr2.1:3467301-3467320 | None:intergenic | 25.0% |
| ! | ATATACAAATCACGGTTAAT+AGG | - | chr2.1:3469130-3469149 | None:intergenic | 25.0% |
| ! | ATGAAAATGAGTTAAGTTAC+GGG | - | chr2.1:3468531-3468550 | None:intergenic | 25.0% |
| ! | ATTCATCAAATATAAAGTGG+AGG | - | chr2.1:3471810-3471829 | None:intergenic | 25.0% |
| ! | CAAAGTATAGAACAAAGTTA+AGG | + | chr2.1:3471651-3471670 | MS.gene47804:CDS | 25.0% |
| ! | CAATTCAAAATTGCATTACT+GGG | + | chr2.1:3466613-3466632 | MS.gene47804:intron | 25.0% |
| ! | CATTCTAGCAACAAATAATT+TGG | - | chr2.1:3467714-3467733 | None:intergenic | 25.0% |
| ! | GGTGATATTAAAAGGATTTA+GGG | - | chr2.1:3467300-3467319 | None:intergenic | 25.0% |
| ! | TAAAACTGAACTAACATAAC+AGG | - | chr2.1:3468979-3468998 | None:intergenic | 25.0% |
| ! | TAATTAAATACATGGTGAGT+TGG | - | chr2.1:3471515-3471534 | None:intergenic | 25.0% |
| ! | TGATCATATCTAAATTACCT+TGG | + | chr2.1:3468687-3468706 | MS.gene47804:intron | 25.0% |
| ! | TTAAATAACAACATTACTGG+CGG | - | chr2.1:3466906-3466925 | None:intergenic | 25.0% |
| ! | TTAATCTCTGTTCTTTCAAA+TGG | + | chr2.1:3470097-3470116 | MS.gene47804:intron | 25.0% |
| ! | TTCACGTAGACAAATATATT+AGG | + | chr2.1:3470617-3470636 | MS.gene47804:intron | 25.0% |
| ! | TTGAATTGGTTAGTAAATTG+GGG | - | chr2.1:3466601-3466620 | None:intergenic | 25.0% |
| ! | TTGGATATAGAAAATTCCAA+AGG | - | chr2.1:3467695-3467714 | None:intergenic | 25.0% |
| ! | TTTACTTGACAATTCTAATC+AGG | + | chr2.1:3468280-3468299 | MS.gene47804:intron | 25.0% |
| ! | TTTCTACGAAAAAGAGAATA+CGG | - | chr2.1:3468360-3468379 | None:intergenic | 25.0% |
| ! | TTTCTTCAATAGTGAAGAAA+GGG | + | chr2.1:3467260-3467279 | MS.gene47804:intron | 25.0% |
| !! | ATAGGATACTCAATTGTTTT+TGG | + | chr2.1:3470456-3470475 | MS.gene47804:intron | 25.0% |
| !! | CGTTGACATACAAATTATTT+TGG | - | chr2.1:3469362-3469381 | None:intergenic | 25.0% |
| !! | TTTTCGTAGAAACTTTCATT+TGG | + | chr2.1:3468368-3468387 | MS.gene47804:intron | 25.0% |
| !!! | ACAAGAATTTTGGTTATTAC+TGG | - | chr2.1:3471220-3471239 | None:intergenic | 25.0% |
| !!! | AGCTTTTTTGTTGATTTTAG+TGG | + | chr2.1:3467517-3467536 | MS.gene47804:intron | 25.0% |
| !!! | ATAACAAATTTTTTGAGTGC+AGG | + | chr2.1:3471869-3471888 | MS.gene47804:intron | 25.0% |
| !!! | ATTTTTCAATTCACACAAGT+AGG | + | chr2.1:3467570-3467589 | MS.gene47804:intron | 25.0% |
| !!! | CTAGCATATTTTAATTCATC+AGG | - | chr2.1:3469517-3469536 | None:intergenic | 25.0% |
| !!! | GAGATTAGAATTTGAGTTTT+AGG | - | chr2.1:3467094-3467113 | None:intergenic | 25.0% |
| !!! | GATTCTAAGGTGATATTAAA+AGG | - | chr2.1:3467308-3467327 | None:intergenic | 25.0% |
| !!! | TAACAAATTTTTTGAGTGCA+GGG | + | chr2.1:3471870-3471889 | MS.gene47804:intron | 25.0% |
| !!! | TGATTTTTTAAATTTCCTGC+TGG | + | chr2.1:3469060-3469079 | MS.gene47804:intron | 25.0% |
| !!! | TGTTTTATTTGTGTGACTAA+AGG | + | chr2.1:3467916-3467935 | MS.gene47804:intron | 25.0% |
| !!! | TTGTTGTTGTAATTTGCTAT+AGG | + | chr2.1:3468066-3468085 | MS.gene47804:intron | 25.0% |
| AAAAATTAAGCGGAGGTTAT+CGG | + | chr2.1:3469851-3469870 | MS.gene47804:intron | 30.0% | |
| AAACTGCATTACATTACTGA+CGG | - | chr2.1:3466998-3467017 | None:intergenic | 30.0% | |
| AAAGCTTTCTACATTGTTTC+TGG | + | chr2.1:3469988-3470007 | MS.gene47804:intron | 30.0% | |
| AAATAGAAGTTTCAGAACTG+CGG | - | chr2.1:3468864-3468883 | None:intergenic | 30.0% | |
| AACCTACGAATTATTACTGA+GGG | + | chr2.1:3466781-3466800 | MS.gene47804:intron | 30.0% | |
| AACGGAATTATATAATCCGT+CGG | + | chr2.1:3466867-3466886 | MS.gene47804:intron | 30.0% | |
| ACATAACAGGTCAAAATACT+AGG | - | chr2.1:3468966-3468985 | None:intergenic | 30.0% | |
| AGAAGATAGAATAATGCCTT+TGG | + | chr2.1:3467598-3467617 | MS.gene47804:intron | 30.0% | |
| AGGTGAGAAAAAAATGATTC+AGG | - | chr2.1:3467232-3467251 | None:intergenic | 30.0% | |
| AGTGAACCATTCATATATCT+AGG | + | chr2.1:3468772-3468791 | MS.gene47804:intron | 30.0% | |
| AGTTGTTATGCTATCACTTT+AGG | + | chr2.1:3467782-3467801 | MS.gene47804:intron | 30.0% | |
| ATATTTGTCTACGTGAATGA+TGG | - | chr2.1:3470614-3470633 | None:intergenic | 30.0% | |
| ATCCGTCAGTAATAGTATAA+CGG | + | chr2.1:3466849-3466868 | MS.gene47804:intron | 30.0% | |
| ATCTACTCACAGTAAAGTTT+GGG | - | chr2.1:3468256-3468275 | None:intergenic | 30.0% | |
| ATGTAAACACACATTTACTG+AGG | + | chr2.1:3466820-3466839 | MS.gene47804:intron | 30.0% | |
| ATGTGTGTTTACATTATTGG+CGG | - | chr2.1:3466814-3466833 | None:intergenic | 30.0% | |
| ATTAAATACATGGTGAGTTG+GGG | - | chr2.1:3471513-3471532 | None:intergenic | 30.0% | |
| ATTATTGAATGCAAGTGAGA+AGG | - | chr2.1:3467204-3467223 | None:intergenic | 30.0% | |
| ATTCAAAATTGCATTACTGG+GGG | + | chr2.1:3466615-3466634 | MS.gene47804:intron | 30.0% | |
| CAATATTACCATTCACCAAA+AGG | - | chr2.1:3468193-3468212 | None:intergenic | 30.0% | |
| CCAATTCAAAATTGCATTAC+TGG | + | chr2.1:3466612-3466631 | MS.gene47804:intron | 30.0% | |
| CTAATACAATTCAGCAAGTA+GGG | + | chr2.1:3466364-3466383 | MS.gene47804:CDS | 30.0% | |
| CTATTGAAGAAACACGATTA+AGG | - | chr2.1:3467252-3467271 | None:intergenic | 30.0% | |
| GAATCCACAATTTCATTTGT+TGG | - | chr2.1:3470164-3470183 | None:intergenic | 30.0% | |
| GCAAATCCTAGATATATGAA+TGG | - | chr2.1:3468781-3468800 | None:intergenic | 30.0% | |
| GCTGCAAACCATATAAAAAA+AGG | - | chr2.1:3471409-3471428 | None:intergenic | 30.0% | |
| GGATTGTTTGCTTTAATTAC+TGG | - | chr2.1:3466956-3466975 | None:intergenic | 30.0% | |
| GGTCATGAAAGTAATACTTA+TGG | + | chr2.1:3469576-3469595 | MS.gene47804:intron | 30.0% | |
| GGTGAGAAAAAAATGATTCA+GGG | - | chr2.1:3467231-3467250 | None:intergenic | 30.0% | |
| GTAACTCACTGAATTATTGT+GGG | - | chr2.1:3466723-3466742 | None:intergenic | 30.0% | |
| GTATCTGTCAAACAAAATAC+AGG | - | chr2.1:3467838-3467857 | None:intergenic | 30.0% | |
| GTTTCTTCAATAGTGAAGAA+AGG | + | chr2.1:3467259-3467278 | MS.gene47804:intron | 30.0% | |
| TAATACTAGAAGGAAGTTGA+TGG | + | chr2.1:3470970-3470989 | MS.gene47804:intron | 30.0% | |
| TAATTCATCAGGACATTGAA+AGG | - | chr2.1:3469506-3469525 | None:intergenic | 30.0% | |
| TAGTGTTAAGAACTTCAACA+AGG | - | chr2.1:3466570-3466589 | None:intergenic | 30.0% | |
| TATCTACTCACAGTAAAGTT+TGG | - | chr2.1:3468257-3468276 | None:intergenic | 30.0% | |
| TGAAAAAATTTGGGCCAAAA+GGG | - | chr2.1:3467037-3467056 | None:intergenic | 30.0% | |
| TGAAAGGAAATAAGATCAGA+AGG | - | chr2.1:3469899-3469918 | None:intergenic | 30.0% | |
| TGAATTAAATACCAAGAGCA+GGG | - | chr2.1:3471787-3471806 | None:intergenic | 30.0% | |
| TGTAAACACACATTTACTGA+GGG | + | chr2.1:3466821-3466840 | MS.gene47804:intron | 30.0% | |
| TGTAACTCACTGAATTATTG+TGG | - | chr2.1:3466724-3466743 | None:intergenic | 30.0% | |
| TGTTCGTATTGTAGATTCTT+TGG | + | chr2.1:3468664-3468683 | MS.gene47804:intron | 30.0% | |
| TTATGCGTATGGATATTTCA+CGG | + | chr2.1:3470574-3470593 | MS.gene47804:intron | 30.0% | |
| TTCCGTTATACTATTACTGA+CGG | - | chr2.1:3466854-3466873 | None:intergenic | 30.0% | |
| TTCTACGAAAAAGAGAATAC+GGG | - | chr2.1:3468359-3468378 | None:intergenic | 30.0% | |
| TTGAGAAGGATACTTTATCT+TGG | + | chr2.1:3469183-3469202 | MS.gene47804:intron | 30.0% | |
| TTGCTACAAGTTTGCAAATA+AGG | + | chr2.1:3470392-3470411 | MS.gene47804:intron | 30.0% | |
| TTGTTTGCTTTAATTACTGG+CGG | - | chr2.1:3466953-3466972 | None:intergenic | 30.0% | |
| TTTCAGTAAATGCATATCCT+TGG | + | chr2.1:3469263-3469282 | MS.gene47804:intron | 30.0% | |
| ! | ACATTGCAATTTAGAACCAA+AGG | + | chr2.1:3470041-3470060 | MS.gene47804:intron | 30.0% |
| ! | ATATCTAGGATTTGCAATGT+GGG | + | chr2.1:3468786-3468805 | MS.gene47804:intron | 30.0% |
| ! | CACTTACACTACAAGAATTT+TGG | - | chr2.1:3471230-3471249 | None:intergenic | 30.0% |
| ! | CCAGTAATGCAATTTTGAAT+TGG | - | chr2.1:3466615-3466634 | None:intergenic | 30.0% |
| ! | CTATGTTTCTAACACAGAAA+AGG | + | chr2.1:3467996-3468015 | MS.gene47804:intron | 30.0% |
| ! | GGATTTGGTTTCAATATTGA+CGG | - | chr2.1:3466977-3466996 | None:intergenic | 30.0% |
| ! | GTTAAGGAAGAAGTATGATT+TGG | + | chr2.1:3471667-3471686 | MS.gene47804:CDS | 30.0% |
| ! | TATATCTAGGATTTGCAATG+TGG | + | chr2.1:3468785-3468804 | MS.gene47804:intron | 30.0% |
| ! | TTTTTGCCTTGTGTAACATT+TGG | + | chr2.1:3471442-3471461 | MS.gene47804:CDS | 30.0% |
| !! | TCAAAATACTAGGTGGATTA+TGG | - | chr2.1:3468956-3468975 | None:intergenic | 30.0% |
| !! | TTAGACATGAATTGAGTTGA+GGG | - | chr2.1:3471959-3471978 | None:intergenic | 30.0% |
| !! | TTGCATCAAAAGCATCATTT+GGG | - | chr2.1:3468824-3468843 | None:intergenic | 30.0% |
| !! | TTTGCATCAAAAGCATCATT+TGG | - | chr2.1:3468825-3468844 | None:intergenic | 30.0% |
| !!! | AGAATTTTGGTTATTACTGG+TGG | - | chr2.1:3471217-3471236 | None:intergenic | 30.0% |
| !!! | AGATTTTTGGTTACTTGAGA+AGG | + | chr2.1:3469169-3469188 | MS.gene47804:intron | 30.0% |
| !!! | ATGAAATGGAGTACTTTTTC+TGG | + | chr2.1:3469017-3469036 | MS.gene47804:intron | 30.0% |
| !!! | GAATTTGAGTTTTAGGGTTT+TGG | - | chr2.1:3467087-3467106 | None:intergenic | 30.0% |
| !!! | TAACGTTATTGAGGGTTTTT+TGG | - | chr2.1:3466687-3466706 | None:intergenic | 30.0% |
| AAAATTAAGCGGAGGTTATC+GGG | + | chr2.1:3469852-3469871 | MS.gene47804:intron | 35.0% | |
| AAACATGTCCACCATGAAAA+GGG | + | chr2.1:3468403-3468422 | MS.gene47804:intron | 35.0% | |
| AACCTGTGAATTTCTGTTGA+AGG | - | chr2.1:3468564-3468583 | None:intergenic | 35.0% | |
| AACTATGCTGAAGTTAGGAT+AGG | + | chr2.1:3470438-3470457 | MS.gene47804:intron | 35.0% | |
| AATCAAGTGGTGAAGAACTT+TGG | - | chr2.1:3470657-3470676 | None:intergenic | 35.0% | |
| ACAATTCCGTCAGTAATTAC+TGG | - | chr2.1:3471019-3471038 | None:intergenic | 35.0% | |
| ACACAAACTATAAGACTGTG+TGG | + | chr2.1:3470121-3470140 | MS.gene47804:intron | 35.0% | |
| ACCTGTGAATTTCTGTTGAA+GGG | - | chr2.1:3468563-3468582 | None:intergenic | 35.0% | |
| AGAGATTAACCTGCAAAGAT+TGG | - | chr2.1:3467474-3467493 | None:intergenic | 35.0% | |
| AGGAATAGGATTAATGCCTT+TGG | + | chr2.1:3467676-3467695 | MS.gene47804:intron | 35.0% | |
| AGGTACAGTTCATCATTCTT+TGG | + | chr2.1:3468613-3468632 | MS.gene47804:intron | 35.0% | |
| AGGTTACTCTCACATATCTT+TGG | + | chr2.1:3467936-3467955 | MS.gene47804:intron | 35.0% | |
| ATAATAACCTCGGCAAAAAG+TGG | - | chr2.1:3469831-3469850 | None:intergenic | 35.0% | |
| ATAATGTAAGGTTGCCATCT+TGG | + | chr2.1:3471572-3471591 | MS.gene47804:intron | 35.0% | |
| ATCCCTCAGTAATAATTCGT+AGG | - | chr2.1:3466786-3466805 | None:intergenic | 35.0% | |
| ATCTGTCCAAATGTTACACA+AGG | - | chr2.1:3471451-3471470 | None:intergenic | 35.0% | |
| ATTGTTCCGTCAGTAATTAC+TGG | + | chr2.1:3471034-3471053 | MS.gene47804:intron | 35.0% | |
| ATTTCATGGTATGGAGGAAT+AGG | + | chr2.1:3467662-3467681 | MS.gene47804:intron | 35.0% | |
| CAGATCTGCAATAACATTAC+TGG | + | chr2.1:3470931-3470950 | MS.gene47804:intron | 35.0% | |
| CATAACATTAGAGGTGATGT+GGG | + | chr2.1:3468159-3468178 | MS.gene47804:intron | 35.0% | |
| CCAAAGAACAAAACAACTCA+TGG | - | chr2.1:3468722-3468741 | None:intergenic | 35.0% | |
| CTGAAAAAATTTGGGCCAAA+AGG | - | chr2.1:3467038-3467057 | None:intergenic | 35.0% | |
| CTTGTAAACTTTATACCAGC+AGG | - | chr2.1:3469078-3469097 | None:intergenic | 35.0% | |
| GAACCTACGAATTATTACTG+AGG | + | chr2.1:3466780-3466799 | MS.gene47804:intron | 35.0% | |
| GAGATTAACCTGCAAAGATT+GGG | - | chr2.1:3467473-3467492 | None:intergenic | 35.0% | |
| GAGGTTAGGTTTCAAGAAAT+TGG | - | chr2.1:3467165-3467184 | None:intergenic | 35.0% | |
| GCTAAATCATTAGAGCATGT+TGG | + | chr2.1:3467759-3467778 | MS.gene47804:intron | 35.0% | |
| GCTAATACAATTCAGCAAGT+AGG | + | chr2.1:3466363-3466382 | MS.gene47804:CDS | 35.0% | |
| GGTGAATGGTAATATTGCAT+AGG | + | chr2.1:3468196-3468215 | MS.gene47804:intron | 35.0% | |
| GTATATGAAACTTGGATGTG+TGG | + | chr2.1:3469410-3469429 | MS.gene47804:intron | 35.0% | |
| GTGAATTAAATACCAAGAGC+AGG | - | chr2.1:3471788-3471807 | None:intergenic | 35.0% | |
| TAACAGGTCAAAATACTAGG+TGG | - | chr2.1:3468963-3468982 | None:intergenic | 35.0% | |
| TATGCGTATGGATATTTCAC+GGG | + | chr2.1:3470575-3470594 | MS.gene47804:intron | 35.0% | |
| TCAACATTGATGTTTCTCAG+AGG | + | chr2.1:3469229-3469248 | MS.gene47804:intron | 35.0% | |
| TCAGTGAGTTACATTTCTGA+CGG | + | chr2.1:3466731-3466750 | MS.gene47804:intron | 35.0% | |
| TCTACTCACAGTAAAGTTTG+GGG | - | chr2.1:3468255-3468274 | None:intergenic | 35.0% | |
| TGAAAGGCAATAAGATCTAG+AGG | - | chr2.1:3469490-3469509 | None:intergenic | 35.0% | |
| TGAGAAATCACATCTGAATG+TGG | - | chr2.1:3471701-3471720 | None:intergenic | 35.0% | |
| TGCAGTTTAATCATCTCTCT+AGG | + | chr2.1:3467010-3467029 | MS.gene47804:intron | 35.0% | |
| TGCGGTTATTGTTTCAGATT+GGG | + | chr2.1:3469947-3469966 | MS.gene47804:intron | 35.0% | |
| TGGCTAGAAGATAGAAAGTT+AGG | + | chr2.1:3469726-3469745 | MS.gene47804:intron | 35.0% | |
| TGTCATGAGAACCAAACAAA+TGG | + | chr2.1:3466414-3466433 | MS.gene47804:CDS | 35.0% | |
| TTCAGAGAGCTCAAAATTAG+AGG | + | chr2.1:3471755-3471774 | MS.gene47804:CDS | 35.0% | |
| TTGTATGTCAACGTCATTCT+TGG | + | chr2.1:3469369-3469388 | MS.gene47804:intron | 35.0% | |
| ! | AAGGAAGAAGTATGATTTGG+TGG | + | chr2.1:3471670-3471689 | MS.gene47804:CDS | 35.0% |
| ! | ACACTTTCAATCTGAAGTGT+CGG | - | chr2.1:3471291-3471310 | None:intergenic | 35.0% |
| ! | AGAAAACACCTTTTGGTGAA+TGG | + | chr2.1:3468182-3468201 | MS.gene47804:intron | 35.0% |
| ! | ATCTTGGAGTGCTATGATAT+TGG | + | chr2.1:3469199-3469218 | MS.gene47804:intron | 35.0% |
| ! | CTTAGACATGAATTGAGTTG+AGG | - | chr2.1:3471960-3471979 | None:intergenic | 35.0% |
| ! | GAATGGTGAATGCAGATTTT+TGG | + | chr2.1:3469156-3469175 | MS.gene47804:intron | 35.0% |
| ! | GGGAGTCTCTGAAAAAATTT+GGG | - | chr2.1:3467046-3467065 | None:intergenic | 35.0% |
| ! | GGTGCTACATATATTTGTGA+CGG | - | chr2.1:3471270-3471289 | None:intergenic | 35.0% |
| ! | GTAAAGAAAAGCACGATTCA+AGG | - | chr2.1:3467399-3467418 | None:intergenic | 35.0% |
| ! | TCTTGGAGTGCTATGATATT+GGG | + | chr2.1:3469200-3469219 | MS.gene47804:intron | 35.0% |
| ! | TGCAATTTAGAACCAAAGGT+AGG | + | chr2.1:3470045-3470064 | MS.gene47804:intron | 35.0% |
| ! | TTCTGACAAAGCATTACTGA+GGG | - | chr2.1:3471069-3471088 | None:intergenic | 35.0% |
| !! | AAGTGTGATTTGTTCTCTCA+TGG | + | chr2.1:3469706-3469725 | MS.gene47804:intron | 35.0% |
| !! | ACTCATGGACATTTTAACCA+AGG | - | chr2.1:3468707-3468726 | None:intergenic | 35.0% |
| !! | CATTACATTACTGACGGATT+TGG | - | chr2.1:3466992-3467011 | None:intergenic | 35.0% |
| !! | CCATGAGTTGTTTTGTTCTT+TGG | + | chr2.1:3468719-3468738 | MS.gene47804:intron | 35.0% |
| !! | TTGTGCACTCAATGGATTAT+GGG | + | chr2.1:3471626-3471645 | MS.gene47804:CDS | 35.0% |
| !! | TTTGTGCACTCAATGGATTA+TGG | + | chr2.1:3471625-3471644 | MS.gene47804:CDS | 35.0% |
| !!! | AGGGATTTTTTGCATTACTG+GGG | + | chr2.1:3471183-3471202 | MS.gene47804:intron | 35.0% |
| !!! | GAGGGATTTTTTGCATTACT+GGG | + | chr2.1:3471182-3471201 | MS.gene47804:intron | 35.0% |
| !!! | GATACTCAATTGTTTTTGGC+TGG | + | chr2.1:3470460-3470479 | MS.gene47804:intron | 35.0% |
| !!! | GGTTTTTTGGATGTTACTGA+AGG | - | chr2.1:3466674-3466693 | None:intergenic | 35.0% |
| !!! | TGAGGGATTTTTTGCATTAC+TGG | + | chr2.1:3471181-3471200 | MS.gene47804:intron | 35.0% |
| !!! | TGATGTCTTTTTTCTCTACG+TGG | + | chr2.1:3469610-3469629 | MS.gene47804:intron | 35.0% |
| AACATGTCCACCATGAAAAG+GGG | + | chr2.1:3468404-3468423 | MS.gene47804:intron | 40.0% | |
| AAGATCAGAAGGATGACCTA+TGG | - | chr2.1:3469888-3469907 | None:intergenic | 40.0% | |
| AAGGTTCATTTAGCAGTGTG+TGG | + | chr2.1:3470411-3470430 | MS.gene47804:intron | 40.0% | |
| AATCCGTCGGTAATACTAGA+AGG | + | chr2.1:3470960-3470979 | MS.gene47804:intron | 40.0% | |
| ACCCTCAATAACGTTACTGA+CGG | + | chr2.1:3466691-3466710 | MS.gene47804:intron | 40.0% | |
| ACTTTAGGTGTCTGTGACAA+TGG | + | chr2.1:3467797-3467816 | MS.gene47804:intron | 40.0% | |
| AGAAGCTATTCATCAGCTTC+AGG | + | chr2.1:3468593-3468612 | MS.gene47804:intron | 40.0% | |
| ATGAGCGTCAGAAATGTTAC+TGG | - | chr2.1:3471122-3471141 | None:intergenic | 40.0% | |
| ATGATAAGAAGCAAGCCTAC+AGG | + | chr2.1:3469460-3469479 | MS.gene47804:intron | 40.0% | |
| ATTCCGCCAGTAATTACTGA+CGG | + | chr2.1:3471010-3471029 | MS.gene47804:intron | 40.0% | |
| ATTCCGCCAGTAATTACTGA+CGG | - | chr2.1:3471029-3471010 | None:intergenic | 40.0% | |
| ATTCCGCCAGTAATTACTGA+GGG | - | chr2.1:3471029-3471010 | None:intergenic | 40.0% | |
| ATTCCGTCAGTAATTACTGG+CGG | - | chr2.1:3471016-3471035 | None:intergenic | 40.0% | |
| ATTGCATTACTGGGGGATTT+AGG | + | chr2.1:3466622-3466641 | MS.gene47804:intron | 40.0% | |
| CACAAAACAGAACCTACCTT+TGG | - | chr2.1:3470060-3470079 | None:intergenic | 40.0% | |
| CCAGTAATGCGTATTACTGA+GGG | + | chr2.1:3471164-3471183 | MS.gene47804:intron | 40.0% | |
| CTCAGTAAAGTAGTCTCATC+CGG | - | chr2.1:3469296-3469315 | None:intergenic | 40.0% | |
| CTCTCTGAACTCTTGACATA+GGG | - | chr2.1:3471744-3471763 | None:intergenic | 40.0% | |
| CTGCGGTTATTGTTTCAGAT+TGG | + | chr2.1:3469946-3469965 | MS.gene47804:intron | 40.0% | |
| CTTCCTTCTAGTATTACCGA+CGG | - | chr2.1:3470966-3470985 | None:intergenic | 40.0% | |
| GAAACATGTCCACCATGAAA+AGG | + | chr2.1:3468402-3468421 | MS.gene47804:intron | 40.0% | |
| GAAATTCACAGGTTCTGTCA+AGG | + | chr2.1:3468570-3468589 | MS.gene47804:intron | 40.0% | |
| GCAGAAACTATGCTGAAGTT+AGG | + | chr2.1:3470433-3470452 | MS.gene47804:intron | 40.0% | |
| GCATAACATTAGAGGTGATG+TGG | + | chr2.1:3468158-3468177 | MS.gene47804:intron | 40.0% | |
| GCATATCCTTGGAATTTGAC+CGG | + | chr2.1:3469274-3469293 | MS.gene47804:intron | 40.0% | |
| GCGGTTATTGTTTCAGATTG+GGG | + | chr2.1:3469948-3469967 | MS.gene47804:intron | 40.0% | |
| GCTTGCTTCTTATCATTCTG+AGG | - | chr2.1:3469456-3469475 | None:intergenic | 40.0% | |
| GGATATTTGCGTTATGCGTA+TGG | + | chr2.1:3470563-3470582 | MS.gene47804:intron | 40.0% | |
| GGCAAAAAGTGGAAAAAGAG+AGG | - | chr2.1:3469820-3469839 | None:intergenic | 40.0% | |
| GGTAAATGAAGCTTCCAAGA+TGG | - | chr2.1:3471589-3471608 | None:intergenic | 40.0% | |
| GTAAGTGATTCTTGAGCACA+TGG | + | chr2.1:3471243-3471262 | MS.gene47804:intron | 40.0% | |
| TATTCCGCCAGTAATTACTG+AGG | - | chr2.1:3471028-3471009 | None:intergenic | 40.0% | |
| TCAAATAGTCCAGTACTCCA+TGG | - | chr2.1:3466393-3466412 | None:intergenic | 40.0% | |
| TCAGTAATACGCATTACTGG+CGG | - | chr2.1:3471164-3471183 | None:intergenic | 40.0% | |
| TCCGTCAGTAACGTTATTGA+GGG | - | chr2.1:3466695-3466714 | None:intergenic | 40.0% | |
| TCTGACGCTCATATTACTGA+GGG | + | chr2.1:3471130-3471149 | MS.gene47804:intron | 40.0% | |
| TCTGTTCTTAGCTTCCTGTT+TGG | + | chr2.1:3470521-3470540 | MS.gene47804:intron | 40.0% | |
| TCTTGACATAGGGAACAACA+AGG | - | chr2.1:3471734-3471753 | None:intergenic | 40.0% | |
| TGAATTTCTGTTGAAGGGCA+TGG | - | chr2.1:3468558-3468577 | None:intergenic | 40.0% | |
| TGGTAAAGTGAGAGAGAAAG+CGG | - | chr2.1:3467067-3467086 | None:intergenic | 40.0% | |
| TGTTGCTAGAATGCTCTGTT+AGG | + | chr2.1:3467721-3467740 | MS.gene47804:intron | 40.0% | |
| TTCCGTCAGTAACGTTATTG+AGG | - | chr2.1:3466696-3466715 | None:intergenic | 40.0% | |
| TTCTGACGCTCATATTACTG+AGG | + | chr2.1:3471129-3471148 | MS.gene47804:intron | 40.0% | |
| TTGATGTTTCTCAGAGGCTA+TGG | + | chr2.1:3469235-3469254 | MS.gene47804:intron | 40.0% | |
| TTTAGGCCCTCAGTAATTAC+TGG | + | chr2.1:3466639-3466658 | MS.gene47804:intron | 40.0% | |
| ! | AAAGGAGGAAAGTGCATTAC+TGG | + | chr2.1:3470887-3470906 | MS.gene47804:intron | 40.0% |
| ! | AAGCCTTTTCCCACTAAGTT+GGG | - | chr2.1:3468048-3468067 | None:intergenic | 40.0% |
| ! | AGAAGGCATGGTGATGAAAT+TGG | - | chr2.1:3467187-3467206 | None:intergenic | 40.0% |
| ! | ATGTGGGAGAAAACACCTTT+TGG | + | chr2.1:3468175-3468194 | MS.gene47804:intron | 40.0% |
| ! | CGGATCTTTTGAATTACCGA+CGG | - | chr2.1:3466886-3466905 | None:intergenic | 40.0% |
| ! | CGGGAGTCTCTGAAAAAATT+TGG | - | chr2.1:3467047-3467066 | None:intergenic | 40.0% |
| ! | GAGCAAGAGCATAACATTAG+AGG | + | chr2.1:3468150-3468169 | MS.gene47804:intron | 40.0% |
| ! | GTTCTGACAAAGCATTACTG+AGG | - | chr2.1:3471070-3471089 | None:intergenic | 40.0% |
| ! | TCTAGAATGTTAGCTCACGA+GGG | - | chr2.1:3468332-3468351 | None:intergenic | 40.0% |
| ! | TGCTTTAATTACTGGCGGAT+TGG | - | chr2.1:3466948-3466967 | None:intergenic | 40.0% |
| ! | TGGACAGATAGCAGAAGTAT+TGG | + | chr2.1:3471462-3471481 | MS.gene47804:CDS | 40.0% |
| ! | TGGTGATGAAATTGGAGGTT+AGG | - | chr2.1:3467179-3467198 | None:intergenic | 40.0% |
| ! | TTACTGGCTGATAAATCCGT+CGG | + | chr2.1:3470947-3470966 | MS.gene47804:intron | 40.0% |
| !! | AAGTTGATGGTGCATTACTG+AGG | + | chr2.1:3470983-3471002 | MS.gene47804:intron | 40.0% |
| !! | AATACTAGGTGGATTATGGC+AGG | - | chr2.1:3468952-3468971 | None:intergenic | 40.0% |
| !! | AGTTGATGGTGCATTACTGA+GGG | + | chr2.1:3470984-3471003 | MS.gene47804:intron | 40.0% |
| !! | ATAGCAGAAGTATTGGATGG+TGG | + | chr2.1:3471469-3471488 | MS.gene47804:CDS | 40.0% |
| !! | ATTCTGAAGCTATTGTGTCG+AGG | + | chr2.1:3467636-3467655 | MS.gene47804:intron | 40.0% |
| !! | ATTTTCCCTCAGTAATGGAG+TGG | - | chr2.1:3471095-3471114 | None:intergenic | 40.0% |
| !! | CAGATAGCAGAAGTATTGGA+TGG | + | chr2.1:3471466-3471485 | MS.gene47804:CDS | 40.0% |
| !! | TTTTCCCTCAGTAATGGAGT+GGG | - | chr2.1:3471094-3471113 | None:intergenic | 40.0% |
| !!! | CAAATTTTTTGAGTGCAGGG+TGG | + | chr2.1:3471873-3471892 | MS.gene47804:intron | 40.0% |
| !!! | GGGATTTTTTGCATTACTGG+GGG | + | chr2.1:3471184-3471203 | MS.gene47804:intron | 40.0% |
| !!! | TCTTTTTCCACTTTTTGCCG+AGG | + | chr2.1:3469821-3469840 | MS.gene47804:intron | 40.0% |
| AACTCCCACTCCATTACTGA+GGG | + | chr2.1:3471087-3471106 | MS.gene47804:intron | 45.0% | |
| AACTGTGACCCAATCTTTGC+AGG | + | chr2.1:3467462-3467481 | MS.gene47804:intron | 45.0% | |
| AAGATTGGGTCACAGTTGGA+TGG | - | chr2.1:3467459-3467478 | None:intergenic | 45.0% | |
| ACAAAGCAGGCATCATTAGC+AGG | - | chr2.1:3471610-3471629 | None:intergenic | 45.0% | |
| AGAATGCTCTGTTAGGACAG+TGG | + | chr2.1:3467728-3467747 | MS.gene47804:intron | 45.0% | |
| AGATCTAGAGGAAGACCTGT+AGG | - | chr2.1:3469478-3469497 | None:intergenic | 45.0% | |
| AGCCCTTCTCAAGACAACAA+GGG | - | chr2.1:3470499-3470518 | None:intergenic | 45.0% | |
| AGCGTCAGAAATGTTACTGG+CGG | - | chr2.1:3471119-3471138 | None:intergenic | 45.0% | |
| AGGCTCATTTCATGGTATGG+AGG | + | chr2.1:3467656-3467675 | MS.gene47804:intron | 45.0% | |
| ATCCATTGAGTGCACAAAGC+AGG | - | chr2.1:3471623-3471642 | None:intergenic | 45.0% | |
| ATGTAGCTGACCCAACTTAG+TGG | + | chr2.1:3468035-3468054 | MS.gene47804:intron | 45.0% | |
| CAGACACAGATGACATGTGT+TGG | - | chr2.1:3471316-3471335 | None:intergenic | 45.0% | |
| CAGACATGAACAACACAAGC+AGG | - | chr2.1:3467976-3467995 | None:intergenic | 45.0% | |
| CATGAAAAGGGGTTACGTGA+GGG | + | chr2.1:3468415-3468434 | MS.gene47804:intron | 45.0% | |
| CCCTCAGTAATACGCATTAC+TGG | - | chr2.1:3471167-3471186 | None:intergenic | 45.0% | |
| CTAGAATGTTAGCTCACGAG+GGG | - | chr2.1:3468331-3468350 | None:intergenic | 45.0% | |
| CTTAGCTTCCTGTTTGGTCT+GGG | + | chr2.1:3470527-3470546 | MS.gene47804:intron | 45.0% | |
| GAGGGAGGATTGTTCAATGT+TGG | - | chr2.1:3471941-3471960 | None:intergenic | 45.0% | |
| GCCAGTAATGCGTATTACTG+AGG | + | chr2.1:3471163-3471182 | MS.gene47804:intron | 45.0% | |
| GCCCTTCAACAGAAATTCAC+AGG | + | chr2.1:3468559-3468578 | MS.gene47804:intron | 45.0% | |
| GCTCTCTGAACTCTTGACAT+AGG | - | chr2.1:3471745-3471764 | None:intergenic | 45.0% | |
| GGTAAAGTGAGAGAGAAAGC+GGG | - | chr2.1:3467066-3467085 | None:intergenic | 45.0% | |
| GTTCCGTCAGTAATTACTGG+CGG | + | chr2.1:3471037-3471056 | MS.gene47804:intron | 45.0% | |
| TAGGATTTGCAATGTGGGTG+AGG | + | chr2.1:3468791-3468810 | MS.gene47804:intron | 45.0% | |
| TCGAGGCTCATTTCATGGTA+TGG | + | chr2.1:3467653-3467672 | MS.gene47804:intron | 45.0% | |
| TCTCATCCGGTCAAATTCCA+AGG | - | chr2.1:3469283-3469302 | None:intergenic | 45.0% | |
| TCTTAGCTTCCTGTTTGGTC+TGG | + | chr2.1:3470526-3470545 | MS.gene47804:intron | 45.0% | |
| TGAATGCAAGTGAGAAGGCA+TGG | - | chr2.1:3467199-3467218 | None:intergenic | 45.0% | |
| TGACCCAACTTAGTGGGAAA+AGG | + | chr2.1:3468042-3468061 | MS.gene47804:intron | 45.0% | |
| TGCAAAGATTGGGTCACAGT+TGG | - | chr2.1:3467463-3467482 | None:intergenic | 45.0% | |
| TGTAGCTGACCCAACTTAGT+GGG | + | chr2.1:3468036-3468055 | MS.gene47804:intron | 45.0% | |
| TTAGCTTCCTGTTTGGTCTG+GGG | + | chr2.1:3470528-3470547 | MS.gene47804:intron | 45.0% | |
| TTCGCATTTCTCTCCCAAGT+CGG | + | chr2.1:3467366-3467385 | MS.gene47804:intron | 45.0% | |
| TTCTCACTTCTCTCCCAACA+CGG | + | chr2.1:3467340-3467359 | MS.gene47804:intron | 45.0% | |
| TTGGGGATGATTCAGAGACA+TGG | - | chr2.1:3468238-3468257 | None:intergenic | 45.0% | |
| TTGTGTCGAGGCTCATTTCA+TGG | + | chr2.1:3467648-3467667 | MS.gene47804:intron | 45.0% | |
| ! | AAATACATGGTGAGTTGGGG+AGG | - | chr2.1:3471510-3471529 | None:intergenic | 45.0% |
| ! | ACTAAGTTGGGTCAGCTACA+TGG | - | chr2.1:3468036-3468055 | None:intergenic | 45.0% |
| ! | AGGCATGGTGATGAAATTGG+AGG | - | chr2.1:3467184-3467203 | None:intergenic | 45.0% |
| ! | ATTTCTGTTGAAGGGCATGG+TGG | - | chr2.1:3468555-3468574 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+TGG | - | chr2.1:3468049-3468068 | None:intergenic | 45.0% |
| ! | GCGGAATTTTCCCTCAGTAA+TGG | - | chr2.1:3471100-3471119 | None:intergenic | 45.0% |
| ! | GTCTAGAATGTTAGCTCACG+AGG | - | chr2.1:3468333-3468352 | None:intergenic | 45.0% |
| ! | TATATTGGTGGCTCAAAGCG+CGG | + | chr2.1:3470352-3470371 | MS.gene47804:intron | 45.0% |
| ! | TCATCTCTCTAGGTCCCTTT+TGG | + | chr2.1:3467020-3467039 | MS.gene47804:intron | 45.0% |
| ! | TCCCCTTGTTGTCTTGAGAA+GGG | + | chr2.1:3470494-3470513 | MS.gene47804:intron | 45.0% |
| ! | TTCCCCTTGTTGTCTTGAGA+AGG | + | chr2.1:3470493-3470512 | MS.gene47804:intron | 45.0% |
| !! | CGGATTGGAAGCGTTATTGA+CGG | - | chr2.1:3466933-3466952 | None:intergenic | 45.0% |
| !! | GACATGAATTGAGTTGAGGG+AGG | - | chr2.1:3471956-3471975 | None:intergenic | 45.0% |
| !!! | TTTTTGAGTGCAGGGTGGAA+TGG | + | chr2.1:3471878-3471897 | MS.gene47804:intron | 45.0% |
| AACGAACAGCTGGTTGCAGT+TGG | - | chr2.1:3467433-3467452 | None:intergenic | 50.0% | |
| AATGTTAGCTCACGAGGGGA+GGG | - | chr2.1:3468327-3468346 | None:intergenic | 50.0% | |
| ACGAACAGCTGGTTGCAGTT+GGG | - | chr2.1:3467432-3467451 | None:intergenic | 50.0% | |
| AGAAATGCGAACCACCGTGT+TGG | - | chr2.1:3467357-3467376 | None:intergenic | 50.0% | |
| AGGCCCTCAGTAATTACTGG+CGG | + | chr2.1:3466642-3466661 | MS.gene47804:intron | 50.0% | |
| ATCGGGTTTCAGTGGTCCAT+AGG | + | chr2.1:3469869-3469888 | MS.gene47804:intron | 50.0% | |
| CAGAAAAGGACAACCACCAC+TGG | + | chr2.1:3468010-3468029 | MS.gene47804:intron | 50.0% | |
| CAGCCCTTCTCAAGACAACA+AGG | - | chr2.1:3470500-3470519 | None:intergenic | 50.0% | |
| CCATGAAAAGGGGTTACGTG+AGG | + | chr2.1:3468414-3468433 | MS.gene47804:intron | 50.0% | |
| GAAATGCGAACCACCGTGTT+GGG | - | chr2.1:3467356-3467375 | None:intergenic | 50.0% | |
| GAACTCCCACTCCATTACTG+AGG | + | chr2.1:3471086-3471105 | MS.gene47804:intron | 50.0% | |
| GAGACATGGTTTCTCGCTGA+AGG | - | chr2.1:3468224-3468243 | None:intergenic | 50.0% | |
| GCCCTTCTCAAGACAACAAG+GGG | - | chr2.1:3470498-3470517 | None:intergenic | 50.0% | |
| TCATACCTTGAGCCAACAGC+AGG | - | chr2.1:3466342-3466361 | None:intergenic | 50.0% | |
| TGCCTGCTTTGTGCACTCAA+TGG | + | chr2.1:3471618-3471637 | MS.gene47804:CDS | 50.0% | |
| TGGATGGTGAAACGAACAGC+TGG | - | chr2.1:3467443-3467462 | None:intergenic | 50.0% | |
| TTCAGCAAGTAGGGAGTCCA+TGG | + | chr2.1:3466373-3466392 | MS.gene47804:CDS | 50.0% | |
| ! | ATATTGGTGGCTCAAAGCGC+GGG | + | chr2.1:3470353-3470372 | MS.gene47804:intron | 50.0% |
| ! | CACGTAACCCCTTTTCATGG+TGG | - | chr2.1:3468414-3468433 | None:intergenic | 50.0% |
| ! | CCTCACGTAACCCCTTTTCA+TGG | - | chr2.1:3468417-3468436 | None:intergenic | 50.0% |
| ! | GGAGGAAAGTGCATTACTGG+CGG | + | chr2.1:3470890-3470909 | MS.gene47804:intron | 50.0% |
| ! | TTCAAGGTGAACCACCGACT+TGG | - | chr2.1:3467383-3467402 | None:intergenic | 50.0% |
| !! | TCAAGGTGAACCACCGACTT+GGG | - | chr2.1:3467382-3467401 | None:intergenic | 50.0% |
| AGAGGACTTGACCCTGCTCT+TGG | + | chr2.1:3471773-3471792 | MS.gene47804:CDS | 55.0% | |
| CGGAGGTTATCGGGTTTCAG+TGG | + | chr2.1:3469861-3469880 | MS.gene47804:intron | 55.0% | |
| CTGAGTCTTCTGCTCCTCAG+TGG | - | chr2.1:3466310-3466329 | None:intergenic | 55.0% | |
| GAATGTTAGCTCACGAGGGG+AGG | - | chr2.1:3468328-3468347 | None:intergenic | 55.0% | |
| GCATTTCTCTCCCAAGTCGG+TGG | + | chr2.1:3467369-3467388 | MS.gene47804:intron | 55.0% | |
| GTAGGGAGTCCATGGAGTAC+TGG | + | chr2.1:3466381-3466400 | MS.gene47804:CDS | 55.0% | |
| TCACTTCTCTCCCAACACGG+TGG | + | chr2.1:3467343-3467362 | MS.gene47804:intron | 55.0% | |
| !! | AGGAACCTGCTGTTGGCTCA+AGG | + | chr2.1:3466334-3466353 | MS.gene47804:CDS | 55.0% |
| CAGCAGCAGGAACCTGCTGT+TGG | + | chr2.1:3466327-3466346 | MS.gene47804:CDS | 60.0% | |
| CGTAACGCCCCAGACCAAAC+AGG | - | chr2.1:3470538-3470557 | None:intergenic | 60.0% | |
| GGAGCAGAAGACTCAGCAGC+AGG | + | chr2.1:3466314-3466333 | MS.gene47804:CDS | 60.0% | |
| GTCAGCTACATGGCCAGTGG+TGG | - | chr2.1:3468026-3468045 | None:intergenic | 60.0% | |
| GTTGCAGTTGGGTCGCAGCT+GGG | - | chr2.1:3467421-3467440 | None:intergenic | 60.0% | |
| TGGGTCAGCTACATGGCCAG+TGG | - | chr2.1:3468029-3468048 | None:intergenic | 60.0% | |
| GGTTGCAGTTGGGTCGCAGC+TGG | - | chr2.1:3467422-3467441 | None:intergenic | 65.0% | |
| ! | GGTCTGGGGCGTTACGCGTA+TGG | + | chr2.1:3470542-3470561 | MS.gene47804:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3466300 | 3471982 | 3466300 | ID=MS.gene47804 |
| chr2.1 | mRNA | 3466300 | 3471982 | 3466300 | ID=MS.gene47804.t1;Parent=MS.gene47804 |
| chr2.1 | exon | 3466300 | 3466435 | 3466300 | ID=MS.gene47804.t1.exon1;Parent=MS.gene47804.t1 |
| chr2.1 | CDS | 3466300 | 3466435 | 3466300 | ID=cds.MS.gene47804.t1;Parent=MS.gene47804.t1 |
| chr2.1 | exon | 3471428 | 3471499 | 3471428 | ID=MS.gene47804.t1.exon2;Parent=MS.gene47804.t1 |
| chr2.1 | CDS | 3471428 | 3471499 | 3471428 | ID=cds.MS.gene47804.t1;Parent=MS.gene47804.t1 |
| chr2.1 | exon | 3471582 | 3471794 | 3471582 | ID=MS.gene47804.t1.exon3;Parent=MS.gene47804.t1 |
| chr2.1 | CDS | 3471582 | 3471794 | 3471582 | ID=cds.MS.gene47804.t1;Parent=MS.gene47804.t1 |
| chr2.1 | exon | 3471891 | 3471982 | 3471891 | ID=MS.gene47804.t1.exon4;Parent=MS.gene47804.t1 |
| chr2.1 | CDS | 3471891 | 3471982 | 3471891 | ID=cds.MS.gene47804.t1;Parent=MS.gene47804.t1 |
| Gene Sequence |
| Protein sequence |
