Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48412.t1 | XP_003602909.1 | 97.9 | 682 | 9 | 1 | 1 | 682 | 40 | 716 | 0.00E+00 | 1218 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48412.t1 | Q56X46 | 54.2 | 681 | 270 | 10 | 1 | 678 | 26 | 667 | 7.4e-185 | 648.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48412.t1 | G7J535 | 97.9 | 682 | 9 | 1 | 1 | 682 | 40 | 716 | 0.0e+00 | 1218.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene48412 | -0.807872 | 4.09E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene48412 | -0.81618 | 6.32E-52 | -1.69E-46 |
| MS.gene052153 | MS.gene48412 | 0.93628 | 2.23E-97 | -1.69E-46 |
| MS.gene052155 | MS.gene48412 | 0.976303 | 1.44E-141 | -1.69E-46 |
| MS.gene053144 | MS.gene48412 | -0.834014 | 3.83E-56 | -1.69E-46 |
| MS.gene053536 | MS.gene48412 | -0.829462 | 5.08E-55 | -1.69E-46 |
| MS.gene053538 | MS.gene48412 | -0.8253 | 5.05E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene48412 | -0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene48412 | -0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene48412 | -0.855533 | 5.92E-62 | -1.69E-46 |
| MS.gene059424 | MS.gene48412 | -0.818698 | 1.71E-52 | -1.69E-46 |
| MS.gene060962 | MS.gene48412 | -0.812647 | 3.82E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48412.t1 | MTR_3g100280 | 97.947 | 682 | 9 | 1 | 1 | 682 | 40 | 716 | 0.0 | 1368 |
| MS.gene48412.t1 | MTR_3g100280 | 98.734 | 553 | 7 | 0 | 130 | 682 | 1 | 553 | 0.0 | 1126 |
| MS.gene48412.t1 | MTR_5g032090 | 55.152 | 689 | 265 | 11 | 6 | 666 | 29 | 701 | 0.0 | 743 |
| MS.gene48412.t1 | MTR_3g100320 | 62.727 | 550 | 192 | 6 | 2 | 546 | 28 | 569 | 0.0 | 696 |
| MS.gene48412.t1 | MTR_3g100320 | 64.175 | 388 | 136 | 3 | 2 | 388 | 40 | 425 | 0.0 | 529 |
| MS.gene48412.t1 | MTR_3g100300 | 37.799 | 209 | 78 | 9 | 284 | 482 | 133 | 299 | 8.76e-20 | 91.3 |
| MS.gene48412.t1 | MTR_3g099260 | 42.697 | 89 | 48 | 2 | 307 | 395 | 76 | 161 | 2.98e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48412.t1 | AT1G58200 | 55.860 | 657 | 266 | 11 | 7 | 654 | 34 | 675 | 0.0 | 726 |
| MS.gene48412.t1 | AT1G58200 | 55.860 | 657 | 266 | 11 | 7 | 654 | 34 | 675 | 0.0 | 726 |
| MS.gene48412.t1 | AT5G10490 | 55.930 | 683 | 255 | 12 | 1 | 678 | 26 | 667 | 0.0 | 714 |
| MS.gene48412.t1 | AT5G10490 | 55.930 | 683 | 255 | 12 | 1 | 678 | 24 | 665 | 0.0 | 714 |
| MS.gene48412.t1 | AT5G10490 | 56.130 | 677 | 251 | 12 | 7 | 678 | 4 | 639 | 0.0 | 714 |
| MS.gene48412.t1 | AT4G00290 | 26.291 | 213 | 141 | 6 | 222 | 426 | 286 | 490 | 5.15e-12 | 69.3 |
Find 155 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGCCTTTGCTGTTTA+TGG | 0.117984 | 3.2:+83545321 | MS.gene48412:CDS |
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | 3.2:-83549636 | None:intergenic |
| ATTGAGGGGTATAAGGTTTC+TGG | 0.194350 | 3.2:+83547242 | MS.gene48412:CDS |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | 3.2:-83549533 | None:intergenic |
| GTCTGAGATGGCAGGATTAT+TGG | 0.231716 | 3.2:-83545682 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | 3.2:-83549674 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | 3.2:-83549981 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | 3.2:-83547209 | None:intergenic |
| GGAATCAATCGAAGCAAAAT+AGG | 0.284248 | 3.2:-83545288 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | 3.2:+83549527 | MS.gene48412:CDS |
| AACAAAGATTGAGGGGTATA+AGG | 0.285821 | 3.2:+83547235 | MS.gene48412:CDS |
| TTATTGCCTTTGCTGTTTAT+GGG | 0.298393 | 3.2:+83545322 | MS.gene48412:CDS |
| TAGGTCATATGATTCTTTAT+TGG | 0.307183 | 3.2:+83545260 | MS.gene48412:intron |
| CTAGATGGCGCATGCCTTGT+TGG | 0.308296 | 3.2:-83543592 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | 3.2:+83547743 | MS.gene48412:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | 3.2:+83546837 | MS.gene48412:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | 3.2:+83546886 | MS.gene48412:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | 3.2:+83549983 | MS.gene48412:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | 3.2:-83549727 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | 3.2:+83549998 | MS.gene48412:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | 3.2:-83549477 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | 3.2:+83549346 | MS.gene48412:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | 3.2:-83549400 | None:intergenic |
| TAGATGGCGCATGCCTTGTT+GGG | 0.335717 | 3.2:-83543591 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | 3.2:+83549984 | MS.gene48412:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | 3.2:+83546813 | MS.gene48412:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | 3.2:+83546812 | MS.gene48412:CDS |
| AGGTCATATGATTCTTTATT+GGG | 0.349745 | 3.2:+83545261 | MS.gene48412:intron |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | 3.2:-83549492 | None:intergenic |
| CAGCCATTATTATTGTGGAC+TGG | 0.362516 | 3.2:+83545557 | MS.gene48412:CDS |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | 3.2:-83550037 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | 3.2:+83549450 | MS.gene48412:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | 3.2:-83547482 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | 3.2:+83549449 | MS.gene48412:CDS |
| GCCCCAGTCCACAATAATAA+TGG | 0.387380 | 3.2:-83545560 | None:intergenic |
| CTACCGGGTGGTGGAGGGAG+TGG | 0.388142 | 3.2:+83543646 | MS.gene48412:CDS |
| GCCATCCTACCGGGTGGTGG+AGG | 0.388405 | 3.2:+83543640 | MS.gene48412:CDS |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | 3.2:-83550064 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | 3.2:+83546910 | MS.gene48412:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | 3.2:-83549869 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | 3.2:+83546885 | MS.gene48412:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | 3.2:+83548558 | MS.gene48412:CDS |
| ACATACATTTCTTGCATCAC+TGG | 0.405151 | 3.2:-83546409 | None:intergenic |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | 3.2:-83547520 | None:intergenic |
| AGCCATTATTATTGTGGACT+GGG | 0.408214 | 3.2:+83545558 | MS.gene48412:CDS |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | 3.2:-83550118 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | 3.2:-83549690 | None:intergenic |
| CATTTGCTTACTGTTTATCA+AGG | 0.428109 | 3.2:+83545764 | MS.gene48412:CDS |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | 3.2:-83547196 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | 3.2:-83549566 | None:intergenic |
| CAACAAGGCATGCGCCATCT+AGG | 0.438226 | 3.2:+83543593 | MS.gene48412:CDS |
| AGCCACTACTTCGTCTCAGC+AGG | 0.445866 | 3.2:+83545349 | MS.gene48412:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | 3.2:-83549726 | None:intergenic |
| ATGTCGCTCTGCCATCCTAC+CGG | 0.447780 | 3.2:+83543630 | MS.gene48412:CDS |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | 3.2:+83547827 | MS.gene48412:CDS |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | 3.2:+83549876 | MS.gene48412:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | 3.2:+83546847 | MS.gene48412:CDS |
| CTTCGATTGATTCCAGCCCT+TGG | 0.468132 | 3.2:+83545297 | MS.gene48412:CDS |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | 3.2:-83550145 | None:intergenic |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | 3.2:-83546795 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | 3.2:+83547472 | MS.gene48412:CDS |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | 3.2:+83549399 | MS.gene48412:CDS |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | 3.2:+83550085 | MS.gene48412:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | 3.2:+83550117 | MS.gene48412:CDS |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | 3.2:+83547554 | MS.gene48412:CDS |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | 3.2:-83547178 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | 3.2:-83547774 | None:intergenic |
| ACTGCAGAAGATGTAGGAAA+AGG | 0.496072 | 3.2:+83549791 | MS.gene48412:CDS |
| CCCTCCACCACCCGGTAGGA+TGG | 0.496972 | 3.2:-83543641 | None:intergenic |
| GAATCAATCGAAGCAAAATA+GGG | 0.497586 | 3.2:-83545287 | None:intergenic |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | 3.2:-83549399 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | 3.2:-83550115 | None:intergenic |
| TAAGGTTTCTGGCACTGTTG+AGG | 0.502672 | 3.2:+83547253 | MS.gene48412:CDS |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | 3.2:-83549511 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | 3.2:+83550086 | MS.gene48412:CDS |
| CCATCCTACCGGGTGGTGGA+GGG | 0.505615 | 3.2:+83543641 | MS.gene48412:CDS |
| TCTGCCATCCTACCGGGTGG+TGG | 0.506157 | 3.2:+83543637 | MS.gene48412:CDS |
| CCTGCCATCTCAGACTAGTC+AGG | 0.507836 | 3.2:+83545690 | MS.gene48412:CDS |
| TACCGGGTGGTGGAGGGAGT+GGG | 0.509448 | 3.2:+83543647 | MS.gene48412:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | 3.2:-83549361 | None:intergenic |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | 3.2:+83550091 | MS.gene48412:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | 3.2:+83547207 | MS.gene48412:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | 3.2:-83549408 | None:intergenic |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | 3.2:-83549702 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | 3.2:+83547588 | MS.gene48412:CDS |
| TTCAGAGGACTGACAGCAGT+TGG | 0.529245 | 3.2:+83545495 | MS.gene48412:intron |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | 3.2:+83549934 | MS.gene48412:CDS |
| CTGGGGCAATGCTCATATGC+AGG | 0.532365 | 3.2:+83545576 | MS.gene48412:CDS |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | 3.2:+83547227 | MS.gene48412:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | 3.2:-83549839 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | 3.2:+83547226 | MS.gene48412:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | 3.2:+83549715 | MS.gene48412:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | 3.2:+83549451 | MS.gene48412:CDS |
| TGTCGCTCTGCCATCCTACC+GGG | 0.537547 | 3.2:+83543631 | MS.gene48412:CDS |
| CATTTGACAGAATCCGGCGC+GGG | 0.537802 | 3.2:+83543313 | None:intergenic |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | 3.2:-83550096 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | 3.2:+83547784 | MS.gene48412:CDS |
| CGTGTACTCCACGTAAAAGA+TGG | 0.539288 | 3.2:-83543567 | None:intergenic |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | 3.2:-83550149 | None:intergenic |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | 3.2:-83550058 | None:intergenic |
| AAAGAAACTGCAGAAGATGT+AGG | 0.549434 | 3.2:+83549785 | MS.gene48412:CDS |
| GTCCCACTCCCTCCACCACC+CGG | 0.553788 | 3.2:-83543649 | None:intergenic |
| TGACAGAATCCGGCGCGGGT+TGG | 0.555558 | 3.2:+83543317 | None:intergenic |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | 3.2:+83549381 | MS.gene48412:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | 3.2:+83549985 | MS.gene48412:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | 3.2:-83549883 | None:intergenic |
| AAGGCAATAATACCAAGGGC+TGG | 0.559924 | 3.2:-83545309 | None:intergenic |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | 3.2:-83549464 | None:intergenic |
| TGTAATCGTCCAACCCGCGC+CGG | 0.565322 | 3.2:-83543326 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | 3.2:-83549977 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | 3.2:-83549606 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | 3.2:-83549980 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | 3.2:-83549959 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | 3.2:+83550080 | MS.gene48412:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | 3.2:-83549838 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | 3.2:+83549433 | MS.gene48412:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | 3.2:+83546877 | MS.gene48412:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | 3.2:+83550121 | MS.gene48412:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | 3.2:-83549512 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | 3.2:-83546929 | None:intergenic |
| AGATGGCGCATGCCTTGTTG+GGG | 0.590773 | 3.2:-83543590 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | 3.2:+83549673 | MS.gene48412:CDS |
| AGTGCGCGGTAAAAGATTCG+TGG | 0.592576 | 3.2:-83543357 | None:intergenic |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | 3.2:+83549566 | MS.gene48412:CDS |
| CCTGACTAGTCTGAGATGGC+AGG | 0.593866 | 3.2:-83545690 | None:intergenic |
| GCCATTATTATTGTGGACTG+GGG | 0.594152 | 3.2:+83545559 | MS.gene48412:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | 3.2:-83547478 | None:intergenic |
| CTCAATCCCATAAACAGCAA+AGG | 0.602491 | 3.2:-83545328 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | 3.2:+83546918 | MS.gene48412:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | 3.2:+83550051 | MS.gene48412:CDS |
| CACTCCCTCCACCACCCGGT+AGG | 0.604652 | 3.2:-83543645 | None:intergenic |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | 3.2:+83546866 | MS.gene48412:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | 3.2:+83547737 | MS.gene48412:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | 3.2:+83546880 | MS.gene48412:CDS |
| ACGACCTGACTAGTCTGAGA+TGG | 0.620289 | 3.2:-83545694 | None:intergenic |
| CGCTCTGCCATCCTACCGGG+TGG | 0.624226 | 3.2:+83543634 | MS.gene48412:CDS |
| ATCCTGCTGAGACGAAGTAG+TGG | 0.624352 | 3.2:-83545351 | None:intergenic |
| AGCAAAGGCAATAATACCAA+GGG | 0.628101 | 3.2:-83545313 | None:intergenic |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | 3.2:+83549574 | MS.gene48412:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | 3.2:+83549733 | MS.gene48412:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | 3.2:+83549877 | MS.gene48412:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | 3.2:+83547785 | MS.gene48412:CDS |
| CAGCAAAGGCAATAATACCA+AGG | 0.642606 | 3.2:-83545314 | None:intergenic |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | 3.2:-83549465 | None:intergenic |
| GTGGAGTACACGCCCCAACA+AGG | 0.646133 | 3.2:+83543578 | MS.gene48412:CDS |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | 3.2:+83549716 | MS.gene48412:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | 3.2:+83547486 | MS.gene48412:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | 3.2:-83549530 | None:intergenic |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | 3.2:-83549837 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | 3.2:-83548567 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | 3.2:+83547228 | MS.gene48412:CDS |
| GTATAATGATCCATACAACT+CGG | 0.679127 | 3.2:+83547186 | MS.gene48412:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | 3.2:-83546875 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | 3.2:+83549604 | MS.gene48412:CDS |
| TCATTTGACAGAATCCGGCG+CGG | 0.715427 | 3.2:+83543312 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATATTTTATAAA+TGG | + | chr3.2:83545825-83545844 | MS.gene48412:intron | 0.0% |
| !! | AAGAAATAAAGAAATAAAAA+AGG | - | chr3.2:83545409-83545428 | None:intergenic | 10.0% |
| !! | GAAATGAAAAAAAATAAAAA+AGG | - | chr3.2:83545437-83545456 | None:intergenic | 10.0% |
| !!! | AAATAAGTTTAATGTTTTAA+TGG | + | chr3.2:83548099-83548118 | MS.gene48412:intron | 10.0% |
| !!! | AATAAGTTTAATGTTTTAAT+GGG | + | chr3.2:83548100-83548119 | MS.gene48412:intron | 10.0% |
| !!! | ATTATTAGAAAAAAAAGTTT+TGG | + | chr3.2:83548160-83548179 | MS.gene48412:intron | 10.0% |
| !!! | GTTTAAATTTTAATGTTATA+TGG | + | chr3.2:83546324-83546343 | MS.gene48412:intron | 10.0% |
| !!! | TTATTTTTAGATATTTATGT+AGG | + | chr3.2:83545241-83545260 | MS.gene48412:intron | 10.0% |
| !! | AAAGTTCATTTAATTGATAA+TGG | - | chr3.2:83547072-83547091 | None:intergenic | 15.0% |
| !! | AAATATTTATTATAGTGTTG+TGG | + | chr3.2:83544380-83544399 | MS.gene48412:intron | 15.0% |
| !! | AATAAAGAAATAAAAAAGGT+TGG | - | chr3.2:83545405-83545424 | None:intergenic | 15.0% |
| !! | ATAAAGAAATAAAAAAGGTT+GGG | - | chr3.2:83545404-83545423 | None:intergenic | 15.0% |
| !! | ATATGTAAAAGTTCATTTAA+AGG | - | chr3.2:83547289-83547308 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAAACGTAATC+AGG | - | chr3.2:83546318-83546337 | None:intergenic | 15.0% |
| !! | CATATAGAAAATATTATCAA+TGG | - | chr3.2:83543919-83543938 | None:intergenic | 15.0% |
| !! | TTTAGTATTAAATGTGTATT+GGG | + | chr3.2:83546291-83546310 | MS.gene48412:intron | 15.0% |
| !!! | ACTTTTTCTTACAAAATTTA+TGG | - | chr3.2:83547027-83547046 | None:intergenic | 15.0% |
| !!! | ATAAATGAAATCTTACTTTT+AGG | - | chr3.2:83546044-83546063 | None:intergenic | 15.0% |
| !!! | TAAATGAAATCTTACTTTTA+GGG | - | chr3.2:83546043-83546062 | None:intergenic | 15.0% |
| !!! | TAAATGAACTTTTACATATA+AGG | + | chr3.2:83547290-83547309 | MS.gene48412:intron | 15.0% |
| !!! | TATTTCAATGATATTTTCTT+TGG | + | chr3.2:83544820-83544839 | MS.gene48412:intron | 15.0% |
| !!! | TGTTTTTTTACATTTGTAAA+AGG | - | chr3.2:83549100-83549119 | None:intergenic | 15.0% |
| !!! | TTTTAGTATTAAATGTGTAT+TGG | + | chr3.2:83546290-83546309 | MS.gene48412:intron | 15.0% |
| !! | AAATATAAGTGGTCTAATTA+AGG | + | chr3.2:83549308-83549327 | MS.gene48412:intron | 20.0% |
| !! | AATAAATAGATACCAAAAGT+TGG | - | chr3.2:83544956-83544975 | None:intergenic | 20.0% |
| !! | AATTAATCTAGACAAGTAAT+GGG | + | chr3.2:83546009-83546028 | MS.gene48412:intron | 20.0% |
| !! | ACTACTGTATTATTATATGT+AGG | - | chr3.2:83549016-83549035 | None:intergenic | 20.0% |
| !! | ATAAAAGTCAAAGAAACATA+TGG | - | chr3.2:83544213-83544232 | None:intergenic | 20.0% |
| !! | ATAAATAGGTTAACGATATT+GGG | - | chr3.2:83546739-83546758 | None:intergenic | 20.0% |
| !! | ATCAATTAAATGAACTTTGT+TGG | + | chr3.2:83547074-83547093 | MS.gene48412:intron | 20.0% |
| !! | CAAATAAGAATCACTATAAT+AGG | + | chr3.2:83548935-83548954 | MS.gene48412:intron | 20.0% |
| !! | TAATTAATCTAGACAAGTAA+TGG | + | chr3.2:83546008-83546027 | MS.gene48412:intron | 20.0% |
| !! | TAGATTATGCATTGAATAAT+AGG | - | chr3.2:83545213-83545232 | None:intergenic | 20.0% |
| !! | TGTAAATATTATGAGAAAGA+CGG | - | chr3.2:83543876-83543895 | None:intergenic | 20.0% |
| !!! | AACTTTTGGTATCTATTTAT+TGG | + | chr3.2:83544955-83544974 | MS.gene48412:intron | 20.0% |
| !!! | ACTGATAATTAATAATTTGC+CGG | - | chr3.2:83548693-83548712 | None:intergenic | 20.0% |
| !!! | AGACATACAAAAACTTTTAA+TGG | - | chr3.2:83544300-83544319 | None:intergenic | 20.0% |
| !!! | ATGCATTTTTTATGCTAATT+AGG | + | chr3.2:83543412-83543431 | MS.gene48412:intron | 20.0% |
| !!! | ATGCTTATTTTGTGAATATT+CGG | + | chr3.2:83548817-83548836 | MS.gene48412:intron | 20.0% |
| !!! | ATTAGAAAAAAAAGTTTTGG+TGG | + | chr3.2:83548163-83548182 | MS.gene48412:intron | 20.0% |
| !!! | TCATATTTTAATGTGAAAAC+TGG | + | chr3.2:83547682-83547701 | MS.gene48412:intron | 20.0% |
| !!! | TTTTATTACTATGTTAACTG+TGG | - | chr3.2:83548038-83548057 | None:intergenic | 20.0% |
| !!! | TTTTTCCTACTAAATATAAG+TGG | + | chr3.2:83549297-83549316 | MS.gene48412:intron | 20.0% |
| ! | AAGAAAAAATGATTGACAGA+TGG | + | chr3.2:83546771-83546790 | MS.gene48412:intron | 25.0% |
| ! | AAGAAGAATATTCTCTTCTA+AGG | - | chr3.2:83549984-83550003 | None:intergenic | 25.0% |
| ! | AATATTCTGCATGAAGAAAA+TGG | - | chr3.2:83547721-83547740 | None:intergenic | 25.0% |
| ! | AATCAAAATGCATATGATGT+TGG | + | chr3.2:83548878-83548897 | MS.gene48412:intron | 25.0% |
| ! | AATTTATGCCAAAAATCAGA+TGG | - | chr3.2:83544144-83544163 | None:intergenic | 25.0% |
| ! | ACATTAGATAGGATTAGAAA+TGG | + | chr3.2:83548133-83548152 | MS.gene48412:intron | 25.0% |
| ! | AGAAAAAATGATTGACAGAT+GGG | + | chr3.2:83546772-83546791 | MS.gene48412:intron | 25.0% |
| ! | AGAAGAATATTCTCTTCTAA+GGG | - | chr3.2:83549983-83550002 | None:intergenic | 25.0% |
| ! | AGGTCATATGATTCTTTATT+GGG | + | chr3.2:83545261-83545280 | MS.gene48412:intron | 25.0% |
| ! | AGTCATAAATTTAGCGTTAT+TGG | + | chr3.2:83549224-83549243 | MS.gene48412:intron | 25.0% |
| ! | ATAAGAATCACTATAATAGG+AGG | + | chr3.2:83548938-83548957 | MS.gene48412:intron | 25.0% |
| ! | ATAAGTAACTCAATATTCAC+AGG | - | chr3.2:83548844-83548863 | None:intergenic | 25.0% |
| ! | ATCCACTCATTCAATATAAA+TGG | - | chr3.2:83547212-83547231 | None:intergenic | 25.0% |
| ! | ATTTATGCCAAAAATCAGAT+GGG | - | chr3.2:83544143-83544162 | None:intergenic | 25.0% |
| ! | ATTTGTTTCCTTCTTAGATT+AGG | - | chr3.2:83548920-83548939 | None:intergenic | 25.0% |
| ! | CAATAAAGATATTTCCTACT+AGG | - | chr3.2:83548435-83548454 | None:intergenic | 25.0% |
| ! | CAATATCGTTAACCTATTTA+TGG | + | chr3.2:83546738-83546757 | MS.gene48412:intron | 25.0% |
| ! | CATAAATAGGTTAACGATAT+TGG | - | chr3.2:83546740-83546759 | None:intergenic | 25.0% |
| ! | CATTGAATAATAGGTTACAA+AGG | - | chr3.2:83545204-83545223 | None:intergenic | 25.0% |
| ! | CTGTTTGAATCTTTCTATTA+GGG | + | chr3.2:83546711-83546730 | MS.gene48412:intron | 25.0% |
| ! | GATATATTTCTCAATTCAGT+TGG | + | chr3.2:83544042-83544061 | MS.gene48412:intron | 25.0% |
| ! | GTCATAAATTTAGCGTTATT+GGG | + | chr3.2:83549225-83549244 | MS.gene48412:intron | 25.0% |
| ! | TAAACATACACACTAAATTG+TGG | - | chr3.2:83543750-83543769 | None:intergenic | 25.0% |
| ! | TAAATAGGTTAACGATATTG+GGG | - | chr3.2:83546738-83546757 | None:intergenic | 25.0% |
| ! | TAAGAATCACTATAATAGGA+GGG | + | chr3.2:83548939-83548958 | MS.gene48412:intron | 25.0% |
| ! | TAATCTCTCTTTATGTGATT+TGG | + | chr3.2:83548210-83548229 | MS.gene48412:intron | 25.0% |
| ! | TAGAAGAGAATATTCTTCTT+GGG | + | chr3.2:83549984-83550003 | MS.gene48412:CDS | 25.0% |
| ! | TAGGATTATACTAGACATTT+AGG | + | chr3.2:83546612-83546631 | MS.gene48412:intron | 25.0% |
| ! | TAGGTCATATGATTCTTTAT+TGG | + | chr3.2:83545260-83545279 | MS.gene48412:intron | 25.0% |
| ! | TATATCAAAGAAAATCTCAC+TGG | - | chr3.2:83544028-83544047 | None:intergenic | 25.0% |
| ! | TATGGATCATTATACTTGAA+AGG | - | chr3.2:83547181-83547200 | None:intergenic | 25.0% |
| ! | TCTATATGTCAAATGATTGT+GGG | - | chr3.2:83547364-83547383 | None:intergenic | 25.0% |
| ! | TCTGTTTGAATCTTTCTATT+AGG | + | chr3.2:83546710-83546729 | MS.gene48412:intron | 25.0% |
| ! | TCTTCACCATTAACTTTATA+CGG | - | chr3.2:83549536-83549555 | None:intergenic | 25.0% |
| ! | TGAGTAAATTTAAATCGAGA+AGG | - | chr3.2:83544854-83544873 | None:intergenic | 25.0% |
| ! | TTAAATGAGATGCCATAAAT+AGG | - | chr3.2:83546753-83546772 | None:intergenic | 25.0% |
| ! | TTAGAAGAGAATATTCTTCT+TGG | + | chr3.2:83549983-83550002 | MS.gene48412:CDS | 25.0% |
| ! | TTAGACCACTTATATTTAGT+AGG | - | chr3.2:83549305-83549324 | None:intergenic | 25.0% |
| ! | TTATTCTCGTTTAATGAAAC+AGG | + | chr3.2:83549331-83549350 | MS.gene48412:intron | 25.0% |
| ! | TTCTATATGTCAAATGATTG+TGG | - | chr3.2:83547365-83547384 | None:intergenic | 25.0% |
| ! | TTTGTAAGAAAAAGTCTTCT+AGG | + | chr3.2:83547032-83547051 | MS.gene48412:intron | 25.0% |
| !! | AAAACTTTTAATGGCATAAG+CGG | - | chr3.2:83544291-83544310 | None:intergenic | 25.0% |
| !! | AAAGTATCACAAATCAGAAA+AGG | - | chr3.2:83545475-83545494 | None:intergenic | 25.0% |
| !! | ATTTTCAGCCATTATTATTG+TGG | + | chr3.2:83545552-83545571 | MS.gene48412:CDS | 25.0% |
| !! | CTAAATCTGCTTGAATTTTA+CGG | - | chr3.2:83547944-83547963 | None:intergenic | 25.0% |
| !! | CTCATTGAAAAACACTATTT+TGG | + | chr3.2:83543515-83543534 | MS.gene48412:intron | 25.0% |
| !! | TTTCATTTATTGCTTGCTTT+TGG | + | chr3.2:83546054-83546073 | MS.gene48412:intron | 25.0% |
| !! | TTTGAATACACTGTAAGTTT+TGG | + | chr3.2:83546132-83546151 | MS.gene48412:intron | 25.0% |
| !!! | AAGTTTAATGTTTTAATGGG+CGG | + | chr3.2:83548103-83548122 | MS.gene48412:intron | 25.0% |
| !!! | ATCTTACTTTTAGGGTAAAA+AGG | - | chr3.2:83546035-83546054 | None:intergenic | 25.0% |
| !!! | ATTTAATTGATAATGGCTAC+TGG | - | chr3.2:83547065-83547084 | None:intergenic | 25.0% |
| !!! | TAGCTTGTTGACATATATTT+TGG | + | chr3.2:83544167-83544186 | MS.gene48412:intron | 25.0% |
| !!! | TTTTTGGGATTTTGTGAAAT+TGG | + | chr3.2:83548781-83548800 | MS.gene48412:intron | 25.0% |
| !!! | TTTTTTAGGTTGCATTGTTT+TGG | - | chr3.2:83549768-83549787 | None:intergenic | 25.0% |
| AAAAAGAACTCTTCCAATTG+AGG | + | chr3.2:83550024-83550043 | MS.gene48412:CDS | 30.0% | |
| AAAGGATCGTTAGTAAGATA+TGG | - | chr3.2:83548494-83548513 | None:intergenic | 30.0% | |
| AAGATGTGGTTTAATGATTC+TGG | + | chr3.2:83544741-83544760 | MS.gene48412:intron | 30.0% | |
| AATAAAAAAGGTTGGGAAGT+TGG | - | chr3.2:83545397-83545416 | None:intergenic | 30.0% | |
| AATAGATACCAAAAGTTGGA+TGG | - | chr3.2:83544952-83544971 | None:intergenic | 30.0% | |
| AATTAACAGGAAAAAGTGAG+AGG | - | chr3.2:83543716-83543735 | None:intergenic | 30.0% | |
| ACAAGGTCAAAAATTCTTTC+TGG | + | chr3.2:83546374-83546393 | MS.gene48412:CDS | 30.0% | |
| ACTATGAAATTGTGTTTGCT+AGG | + | chr3.2:83543810-83543829 | MS.gene48412:intron | 30.0% | |
| AGAAAAAGGAAACAAATGCA+TGG | - | chr3.2:83545013-83545032 | None:intergenic | 30.0% | |
| AGAAGAGAATATTCTTCTTG+GGG | + | chr3.2:83549985-83550004 | MS.gene48412:CDS | 30.0% | |
| AGACAGTAGAAAATAAACAG+TGG | - | chr3.2:83546948-83546967 | None:intergenic | 30.0% | |
| AGTACTTTACCTTAACACAA+AGG | - | chr3.2:83548570-83548589 | None:intergenic | 30.0% | |
| ATAGATACCAAAAGTTGGAT+GGG | - | chr3.2:83544951-83544970 | None:intergenic | 30.0% | |
| ATAGTAGTTACTACCAGTTA+CGG | + | chr3.2:83546201-83546220 | MS.gene48412:intron | 30.0% | |
| ATATCTTACTAACGATCCTT+TGG | + | chr3.2:83548493-83548512 | MS.gene48412:intron | 30.0% | |
| ATCATTGAAATACCAAACGT+GGG | - | chr3.2:83544812-83544831 | None:intergenic | 30.0% | |
| ATCGTAGCATTATTTGTTTC+AGG | + | chr3.2:83545650-83545669 | MS.gene48412:intron | 30.0% | |
| CACAAAACACAATGAATATG+GGG | - | chr3.2:83546996-83547015 | None:intergenic | 30.0% | |
| CATTTGCTTACTGTTTATCA+AGG | + | chr3.2:83545764-83545783 | MS.gene48412:CDS | 30.0% | |
| CCACAAAACACAATGAATAT+GGG | - | chr3.2:83546997-83547016 | None:intergenic | 30.0% | |
| CTAGACTAGAAATTACGATT+AGG | + | chr3.2:83546593-83546612 | MS.gene48412:intron | 30.0% | |
| CTATATGTCAAATGATTGTG+GGG | - | chr3.2:83547363-83547382 | None:intergenic | 30.0% | |
| GAATCAATCGAAGCAAAATA+GGG | - | chr3.2:83545290-83545309 | None:intergenic | 30.0% | |
| GCTGTTTAACATAATCTTAG+TGG | - | chr3.2:83545070-83545089 | None:intergenic | 30.0% | |
| GTAATTTAAGTGTGAGTTGT+TGG | + | chr3.2:83544526-83544545 | MS.gene48412:intron | 30.0% | |
| GTATAATGATCCATACAACT+CGG | + | chr3.2:83547186-83547205 | MS.gene48412:CDS | 30.0% | |
| TAACTATTTCAGCAGTACTT+TGG | - | chr3.2:83546506-83546525 | None:intergenic | 30.0% | |
| TATCAATATCTGCAATCCAA+AGG | - | chr3.2:83548512-83548531 | None:intergenic | 30.0% | |
| TATCATTGAAATACCAAACG+TGG | - | chr3.2:83544813-83544832 | None:intergenic | 30.0% | |
| TCCACAAAACACAATGAATA+TGG | - | chr3.2:83546998-83547017 | None:intergenic | 30.0% | |
| TCGTAGCATTATTTGTTTCA+GGG | + | chr3.2:83545651-83545670 | MS.gene48412:intron | 30.0% | |
| TGATTATAGCATTGCATTGA+GGG | - | chr3.2:83545913-83545932 | None:intergenic | 30.0% | |
| TGGATTCAAACAAAGATTGA+GGG | + | chr3.2:83547227-83547246 | MS.gene48412:CDS | 30.0% | |
| TTACATTTCTATCAGTCACT+TGG | + | chr3.2:83547588-83547607 | MS.gene48412:CDS | 30.0% | |
| TTACTATGTTAACTGTGGTA+AGG | - | chr3.2:83548033-83548052 | None:intergenic | 30.0% | |
| TTGCAGAATTAATGCAAAGA+AGG | - | chr3.2:83547411-83547430 | None:intergenic | 30.0% | |
| TTTATGCCAAAAATCAGATG+GGG | - | chr3.2:83544142-83544161 | None:intergenic | 30.0% | |
| TTTGGTATCTATTTATTGGC+AGG | + | chr3.2:83544959-83544978 | MS.gene48412:intron | 30.0% | |
| ! | AAAAGTGATGAGAATTTTGC+AGG | + | chr3.2:83549638-83549657 | MS.gene48412:CDS | 30.0% |
| ! | ATTTGTTTCCTTTTTCTCTG+AGG | + | chr3.2:83545016-83545035 | MS.gene48412:intron | 30.0% |
| ! | CAATGATATTTTCTTTGGCA+TGG | + | chr3.2:83544825-83544844 | MS.gene48412:intron | 30.0% |
| ! | GTTTTCAGCTTAATTCAACA+AGG | + | chr3.2:83546357-83546376 | MS.gene48412:intron | 30.0% |
| ! | TAGTGTTCTTTTAACAAGGT+CGG | + | chr3.2:83543690-83543709 | MS.gene48412:intron | 30.0% |
| ! | TGCAAAATTCTCATCACTTT+TGG | - | chr3.2:83549639-83549658 | None:intergenic | 30.0% |
| ! | TGTATATTTTCTGAACTGTC+CGG | - | chr3.2:83549421-83549440 | None:intergenic | 30.0% |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | chr3.2:83548540-83548559 | MS.gene48412:CDS | 30.0% |
| !! | AATTAGGTTTGAAAGCGTTT+AGG | + | chr3.2:83543428-83543447 | MS.gene48412:intron | 30.0% |
| !! | ATTATTGCCTTTGCTGTTTA+TGG | + | chr3.2:83545321-83545340 | MS.gene48412:CDS | 30.0% |
| !! | GATGTTGGTTTAAATAGTAC+AGG | + | chr3.2:83548893-83548912 | MS.gene48412:intron | 30.0% |
| !! | TAGTCATTTTGCTTAGCATT+TGG | - | chr3.2:83550163-83550182 | None:intergenic | 30.0% |
| !! | TGTACTTGACTTCTGTTTTT+GGG | + | chr3.2:83548766-83548785 | MS.gene48412:intron | 30.0% |
| !! | TTATTGCCTTTGCTGTTTAT+GGG | + | chr3.2:83545322-83545341 | MS.gene48412:CDS | 30.0% |
| !! | TTCATCTTTTTCTAGCATGT+GGG | + | chr3.2:83547445-83547464 | MS.gene48412:intron | 30.0% |
| !! | TTTCATCTTTTTCTAGCATG+TGG | + | chr3.2:83547444-83547463 | MS.gene48412:intron | 30.0% |
| !! | TTTGAAAGCGTTTAGGTTAT+TGG | + | chr3.2:83543435-83543454 | MS.gene48412:intron | 30.0% |
| !! | TTTGGGTTGTTATCTATGAT+AGG | + | chr3.2:83547980-83547999 | MS.gene48412:intron | 30.0% |
| !!! | CTCACTTTTTCCTGTTAATT+CGG | + | chr3.2:83543716-83543735 | MS.gene48412:intron | 30.0% |
| !!! | CTTGCTTTTGGTTTTTGAAA+GGG | + | chr3.2:83546066-83546085 | MS.gene48412:intron | 30.0% |
| !!! | GATTTGTGATACTTTTTCAG+AGG | + | chr3.2:83545480-83545499 | MS.gene48412:intron | 30.0% |
| !!! | TCCTGATTTTTTGTATATGC+CGG | + | chr3.2:83548671-83548690 | MS.gene48412:intron | 30.0% |
| !!! | TCTTCTGCAGTTTCTTTTTT+AGG | - | chr3.2:83549782-83549801 | None:intergenic | 30.0% |
| AAAAAACATACCAAAGTGCG+CGG | - | chr3.2:83543374-83543393 | None:intergenic | 35.0% | |
| AAAGAAACTGCAGAAGATGT+AGG | + | chr3.2:83549785-83549804 | MS.gene48412:CDS | 35.0% | |
| AAAGTTCCAAGAAGTCAAGA+TGG | - | chr3.2:83549159-83549178 | None:intergenic | 35.0% | |
| AACCATTGACAAGACTAGAT+TGG | + | chr3.2:83548335-83548354 | MS.gene48412:intron | 35.0% | |
| AAGCAATATACACTGCTGTT+TGG | + | chr3.2:83546812-83546831 | MS.gene48412:CDS | 35.0% | |
| AATGAATCCATCTCCTAACT+CGG | + | chr3.2:83550051-83550070 | MS.gene48412:CDS | 35.0% | |
| ACATACATTTCTTGCATCAC+TGG | - | chr3.2:83546412-83546431 | None:intergenic | 35.0% | |
| ACGATCATCACCTCTAATAA+TGG | - | chr3.2:83547485-83547504 | None:intergenic | 35.0% | |
| ACTATAAGAGACCAAAGACT+AGG | - | chr3.2:83545967-83545986 | None:intergenic | 35.0% | |
| ACTTTGGCAGAGAAACATTA+TGG | - | chr3.2:83546490-83546509 | None:intergenic | 35.0% | |
| AGAATCAGTCATTTACTGAC+TGG | - | chr3.2:83549049-83549068 | None:intergenic | 35.0% | |
| AGAGAAGCGAGCTAATTATT+AGG | + | chr3.2:83544410-83544429 | MS.gene48412:intron | 35.0% | |
| AGCAAAGGCAATAATACCAA+GGG | - | chr3.2:83545316-83545335 | None:intergenic | 35.0% | |
| AGCCATTATTATTGTGGACT+GGG | + | chr3.2:83545558-83545577 | MS.gene48412:CDS | 35.0% | |
| AGGTCAAAAATTCTTTCTGG+AGG | + | chr3.2:83546377-83546396 | MS.gene48412:CDS | 35.0% | |
| AGTCAAATGAGAGAATGCTT+TGG | + | chr3.2:83547962-83547981 | MS.gene48412:intron | 35.0% | |
| ATAAGAAACTGCAATTGCCT+CGG | - | chr3.2:83548599-83548618 | None:intergenic | 35.0% | |
| ATATAAATGGCCGAGTTGTA+TGG | - | chr3.2:83547199-83547218 | None:intergenic | 35.0% | |
| ATCTGACTCAGAAATCTCAT+TGG | + | chr3.2:83547554-83547573 | MS.gene48412:CDS | 35.0% | |
| ATGTGGGATATTGATGTTTG+AGG | + | chr3.2:83544491-83544510 | MS.gene48412:intron | 35.0% | |
| CAAAGAAGGAAATGCATTGA+TGG | - | chr3.2:83547397-83547416 | None:intergenic | 35.0% | |
| CAATATCCCACATTGATATG+TGG | - | chr3.2:83544484-83544503 | None:intergenic | 35.0% | |
| CAGAGAGTAAAGTAACAGTT+AGG | - | chr3.2:83543486-83543505 | None:intergenic | 35.0% | |
| CATCAACATTCATGCAACAT+AGG | - | chr3.2:83548061-83548080 | None:intergenic | 35.0% | |
| CATCTTCACCTAAAACCTTA+AGG | - | chr3.2:83544727-83544746 | None:intergenic | 35.0% | |
| CTATAAGAGACCAAAGACTA+GGG | - | chr3.2:83545966-83545985 | None:intergenic | 35.0% | |
| CTATGTTGCATGAATGTTGA+TGG | + | chr3.2:83548059-83548078 | MS.gene48412:intron | 35.0% | |
| CTGATTATAGCATTGCATTG+AGG | - | chr3.2:83545914-83545933 | None:intergenic | 35.0% | |
| CTTAGCATTTGGAAATGAAG+AGG | - | chr3.2:83550152-83550171 | None:intergenic | 35.0% | |
| GAACCACCGTATAAAGTTAA+TGG | + | chr3.2:83549527-83549546 | MS.gene48412:CDS | 35.0% | |
| GACTCATGGTTAGTAATAAC+AGG | - | chr3.2:83549872-83549891 | None:intergenic | 35.0% | |
| GATATTGATGTTTGAGGGAA+GGG | + | chr3.2:83544497-83544516 | MS.gene48412:intron | 35.0% | |
| GATTATAGCATTGCATTGAG+GGG | - | chr3.2:83545912-83545931 | None:intergenic | 35.0% | |
| GCAAGATGAAGAGAAATCTT+CGG | + | chr3.2:83549934-83549953 | MS.gene48412:CDS | 35.0% | |
| GCTAACAAAGATAAGAAGGA+TGG | + | chr3.2:83550121-83550140 | MS.gene48412:CDS | 35.0% | |
| GCTTAAAAGACCACAGATTA+AGG | + | chr3.2:83546169-83546188 | MS.gene48412:intron | 35.0% | |
| GGAATCAATCGAAGCAAAAT+AGG | - | chr3.2:83545291-83545310 | None:intergenic | 35.0% | |
| GGATTCAAACAAAGATTGAG+GGG | + | chr3.2:83547228-83547247 | MS.gene48412:CDS | 35.0% | |
| GGATTCATTTCTTCCTCAAT+TGG | - | chr3.2:83550040-83550059 | None:intergenic | 35.0% | |
| GGCCATTTATATTGAATGAG+TGG | + | chr3.2:83547207-83547226 | MS.gene48412:CDS | 35.0% | |
| GTCAAATGAGAGAATGCTTT+GGG | + | chr3.2:83547963-83547982 | MS.gene48412:intron | 35.0% | |
| GTCTTCTGAATTCATGTTAG+TGG | + | chr3.2:83543938-83543957 | MS.gene48412:intron | 35.0% | |
| GTCTTCTGAATTCGTGATAA+TGG | + | chr3.2:83544316-83544335 | MS.gene48412:intron | 35.0% | |
| GTGGATTCAAACAAAGATTG+AGG | + | chr3.2:83547226-83547245 | MS.gene48412:CDS | 35.0% | |
| TAGATACCAAAAGTTGGATG+GGG | - | chr3.2:83544950-83544969 | None:intergenic | 35.0% | |
| TAGTGTCAAACCAAGTTGTA+TGG | + | chr3.2:83544909-83544928 | MS.gene48412:intron | 35.0% | |
| TATTCACTCCTCAGAGAAAA+AGG | - | chr3.2:83545027-83545046 | None:intergenic | 35.0% | |
| TCACCATTAACTTTATACGG+TGG | - | chr3.2:83549533-83549552 | None:intergenic | 35.0% | |
| TCATCACCTCTAATAATGGT+TGG | - | chr3.2:83547481-83547500 | None:intergenic | 35.0% | |
| TCATTATTCATGGAGTTGCT+AGG | + | chr3.2:83546847-83546866 | MS.gene48412:CDS | 35.0% | |
| TCATTGAAATACCAAACGTG+GGG | - | chr3.2:83544811-83544830 | None:intergenic | 35.0% | |
| TCCTGCTAACAAAGATAAGA+AGG | + | chr3.2:83550117-83550136 | MS.gene48412:CDS | 35.0% | |
| TCCTTCTTATCTTTGTTAGC+AGG | - | chr3.2:83550121-83550140 | None:intergenic | 35.0% | |
| TCTGAGGAGTGAATATAGAT+TGG | + | chr3.2:83545032-83545051 | MS.gene48412:intron | 35.0% | |
| TCTGCATGAAGAAAATGGAA+TGG | - | chr3.2:83547716-83547735 | None:intergenic | 35.0% | |
| TGAATCATGACTAGCAGAAT+AGG | + | chr3.2:83545801-83545820 | MS.gene48412:intron | 35.0% | |
| TGTCTATTGCACGTAATGAT+AGG | + | chr3.2:83547901-83547920 | MS.gene48412:intron | 35.0% | |
| TGTGGGATATTGATGTTTGA+GGG | + | chr3.2:83544492-83544511 | MS.gene48412:intron | 35.0% | |
| TGTTTGATGTCTTTGATCCA+TGG | + | chr3.2:83548393-83548412 | MS.gene48412:intron | 35.0% | |
| TTATGCCAAAAATCAGATGG+GGG | - | chr3.2:83544141-83544160 | None:intergenic | 35.0% | |
| TTCTCGTTTAATGAAACAGG+AGG | + | chr3.2:83549334-83549353 | MS.gene48412:intron | 35.0% | |
| TTCTTATCTTTGTTAGCAGG+AGG | - | chr3.2:83550118-83550137 | None:intergenic | 35.0% | |
| TTGACAGTGAACTTGTGATT+AGG | - | chr3.2:83547523-83547542 | None:intergenic | 35.0% | |
| TTTCTCATGCTTTAACAACC+TGG | + | chr3.2:83547641-83547660 | MS.gene48412:intron | 35.0% | |
| TTTGGCTAAAAATCCTCAAG+TGG | + | chr3.2:83547761-83547780 | MS.gene48412:CDS | 35.0% | |
| ! | AACAAAGATTGAGGGGTATA+AGG | + | chr3.2:83547235-83547254 | MS.gene48412:CDS | 35.0% |
| ! | ACTAAGTGCCTTAAGGTTTT+AGG | + | chr3.2:83544716-83544735 | MS.gene48412:intron | 35.0% |
| ! | AGAATATTCTCTTCTAAGGG+AGG | - | chr3.2:83549980-83549999 | None:intergenic | 35.0% |
| ! | AGCAATATACACTGCTGTTT+GGG | + | chr3.2:83546813-83546832 | MS.gene48412:CDS | 35.0% |
| ! | AGGAGAGTATAACGAATAGA+GGG | + | chr3.2:83548267-83548286 | MS.gene48412:intron | 35.0% |
| ! | CCCATATTCATTGTGTTTTG+TGG | + | chr3.2:83546994-83547013 | MS.gene48412:intron | 35.0% |
| ! | CTGCTAGTGTTCTTTTAACA+AGG | + | chr3.2:83543686-83543705 | MS.gene48412:CDS | 35.0% |
| ! | CTGTACTTGACTTCTGTTTT+TGG | + | chr3.2:83548765-83548784 | MS.gene48412:intron | 35.0% |
| ! | GACTTGTAAAAAGTGCAATG+AGG | + | chr3.2:83548247-83548266 | MS.gene48412:intron | 35.0% |
| ! | GGAAACTTTTCCGAATTAAC+AGG | - | chr3.2:83543729-83543748 | None:intergenic | 35.0% |
| ! | GGAAATGCATTGATGGTAAT+AGG | - | chr3.2:83547390-83547409 | None:intergenic | 35.0% |
| ! | GGTGGTTCTATTAGTAAGAA+CGG | - | chr3.2:83549515-83549534 | None:intergenic | 35.0% |
| ! | GTGGTTCTATTAGTAAGAAC+GGG | - | chr3.2:83549514-83549533 | None:intergenic | 35.0% |
| !! | AACCAATCTAGTCTTGTCAA+TGG | - | chr3.2:83548340-83548359 | None:intergenic | 35.0% |
| !! | AAGTTTTGGTGGCACTTTTT+TGG | + | chr3.2:83548174-83548193 | MS.gene48412:intron | 35.0% |
| !! | ATCTAGTCTTGTCAATGGTT+TGG | - | chr3.2:83548335-83548354 | None:intergenic | 35.0% |
| !! | GGTTTTTGAAAGGGTACAAA+TGG | + | chr3.2:83546075-83546094 | MS.gene48412:intron | 35.0% |
| !! | TCAGAAAAGGTGCTAATTGT+TGG | - | chr3.2:83545462-83545481 | None:intergenic | 35.0% |
| !! | TTATGTGATTTGGTCAAGTG+TGG | + | chr3.2:83548220-83548239 | MS.gene48412:intron | 35.0% |
| !!! | AGTTTTGGTGGCACTTTTTT+GGG | + | chr3.2:83548175-83548194 | MS.gene48412:intron | 35.0% |
| !!! | GCACTTTTTTGGGAAAAAGA+TGG | + | chr3.2:83548185-83548204 | MS.gene48412:intron | 35.0% |
| !!! | GCTTGCTTTTGGTTTTTGAA+AGG | + | chr3.2:83546065-83546084 | MS.gene48412:intron | 35.0% |
| !!! | TAAGGTTTTAGGTGAAGATG+TGG | + | chr3.2:83544727-83544746 | MS.gene48412:intron | 35.0% |
| !!! | TTTAGGTTGCATTGTTTTGG+AGG | - | chr3.2:83549765-83549784 | None:intergenic | 35.0% |
| AACATTATGGACACGTCAAG+TGG | - | chr3.2:83546477-83546496 | None:intergenic | 40.0% | |
| AACTATCAGAACCCATGTTC+TGG | - | chr3.2:83549730-83549749 | None:intergenic | 40.0% | |
| AATGACTAGTAAGTAGCAGG+TGG | - | chr3.2:83544885-83544904 | None:intergenic | 40.0% | |
| AATTTCTGTTGCTCCACTTG+AGG | - | chr3.2:83547777-83547796 | None:intergenic | 40.0% | |
| ACAAAAACACTGCACCTAGA+TGG | - | chr3.2:83543610-83543629 | None:intergenic | 40.0% | |
| ACAAAGCAGAAAACCGTAAC+TGG | - | chr3.2:83546217-83546236 | None:intergenic | 40.0% | |
| ACGAATGACTAGTAAGTAGC+AGG | - | chr3.2:83544888-83544907 | None:intergenic | 40.0% | |
| ACTATCAGAACCCATGTTCT+GGG | - | chr3.2:83549729-83549748 | None:intergenic | 40.0% | |
| ACTCATCTTTAAACCACCAG+AGG | + | chr3.2:83544065-83544084 | MS.gene48412:intron | 40.0% | |
| ACTGCAGAAGATGTAGGAAA+AGG | + | chr3.2:83549791-83549810 | MS.gene48412:CDS | 40.0% | |
| AGAAACTACACTATGTGCAG+GGG | - | chr3.2:83549840-83549859 | None:intergenic | 40.0% | |
| AGAGAGACCTAGAAAACTAG+AGG | + | chr3.2:83548309-83548328 | MS.gene48412:intron | 40.0% | |
| AGATACCAAAAGTTGGATGG+GGG | - | chr3.2:83544949-83544968 | None:intergenic | 40.0% | |
| AGCAACAGAAATTGCACAGA+AGG | + | chr3.2:83547784-83547803 | MS.gene48412:CDS | 40.0% | |
| AGTGAAAATGGAATCCCCAA+AGG | - | chr3.2:83549468-83549487 | None:intergenic | 40.0% | |
| ATGATAGGTTAGTGCGACTA+AGG | + | chr3.2:83547995-83548014 | MS.gene48412:intron | 40.0% | |
| CAATGAGGAAAAAGATGCCA+AGG | + | chr3.2:83549589-83549608 | MS.gene48412:CDS | 40.0% | |
| CAGAAACTACACTATGTGCA+GGG | - | chr3.2:83549841-83549860 | None:intergenic | 40.0% | |
| CAGCAAAGGCAATAATACCA+AGG | - | chr3.2:83545317-83545336 | None:intergenic | 40.0% | |
| CAGCCATTATTATTGTGGAC+TGG | + | chr3.2:83545557-83545576 | MS.gene48412:CDS | 40.0% | |
| CCTCGGAAAATATACCCTTT+GGG | + | chr3.2:83549450-83549469 | MS.gene48412:CDS | 40.0% | |
| CTATAATCAGCTTGCAGTTG+TGG | + | chr3.2:83544344-83544363 | MS.gene48412:intron | 40.0% | |
| CTCAATCCCATAAACAGCAA+AGG | - | chr3.2:83545331-83545350 | None:intergenic | 40.0% | |
| CTCGGAAAATATACCCTTTG+GGG | + | chr3.2:83549451-83549470 | MS.gene48412:CDS | 40.0% | |
| CTGAGAGTAACCATACAACT+TGG | - | chr3.2:83544922-83544941 | None:intergenic | 40.0% | |
| GAGGCAATTGCAGTTTCTTA+TGG | + | chr3.2:83548598-83548617 | MS.gene48412:intron | 40.0% | |
| GCAACAGAAATTGCACAGAA+GGG | + | chr3.2:83547785-83547804 | MS.gene48412:CDS | 40.0% | |
| GCATCAGAAATTGTTTGACC+AGG | - | chr3.2:83547662-83547681 | None:intergenic | 40.0% | |
| GCATTTGGAAATGAAGAGGT+TGG | - | chr3.2:83550148-83550167 | None:intergenic | 40.0% | |
| GCCGGCATATACAAAAAATC+AGG | - | chr3.2:83548675-83548694 | None:intergenic | 40.0% | |
| GGATATTGATGTTTGAGGGA+AGG | + | chr3.2:83544496-83544515 | MS.gene48412:intron | 40.0% | |
| GTACAGGTCCTAATCTAAGA+AGG | + | chr3.2:83548909-83548928 | MS.gene48412:intron | 40.0% | |
| GTGAAAATGGAATCCCCAAA+GGG | - | chr3.2:83549467-83549486 | None:intergenic | 40.0% | |
| GTTCCACGTCGGATAATAAT+TGG | + | chr3.2:83544548-83544567 | MS.gene48412:intron | 40.0% | |
| TAAGAAACTGCAATTGCCTC+GGG | - | chr3.2:83548598-83548617 | None:intergenic | 40.0% | |
| TACTAACCATGAGTCTAGCA+GGG | + | chr3.2:83549877-83549896 | MS.gene48412:CDS | 40.0% | |
| TACTTCCAGACAATAAGCAC+AGG | - | chr3.2:83543978-83543997 | None:intergenic | 40.0% | |
| TAGAGGGCTGTCTAATAGTT+AGG | + | chr3.2:83548283-83548302 | MS.gene48412:intron | 40.0% | |
| TAGCCAATTATTATCCGACG+TGG | - | chr3.2:83544554-83544573 | None:intergenic | 40.0% | |
| TATGTGCCATCTTGACTTCT+TGG | + | chr3.2:83549150-83549169 | MS.gene48412:intron | 40.0% | |
| TATTAGAGGTGATGATCGTG+AGG | + | chr3.2:83547486-83547505 | MS.gene48412:CDS | 40.0% | |
| TATTGTAGCTGATATGCGCA+AGG | + | chr3.2:83547737-83547756 | MS.gene48412:CDS | 40.0% | |
| TCAGAAACTACACTATGTGC+AGG | - | chr3.2:83549842-83549861 | None:intergenic | 40.0% | |
| TCCATCTAGTGTAAACTCCA+AGG | + | chr3.2:83549673-83549692 | MS.gene48412:CDS | 40.0% | |
| TCCTTGGAGTTTACACTAGA+TGG | - | chr3.2:83549677-83549696 | None:intergenic | 40.0% | |
| TGGTCACCAACCATTATTAG+AGG | + | chr3.2:83547472-83547491 | MS.gene48412:CDS | 40.0% | |
| TTACTAACCATGAGTCTAGC+AGG | + | chr3.2:83549876-83549895 | MS.gene48412:CDS | 40.0% | |
| TTAGTGCGACTAAGGCATAA+GGG | + | chr3.2:83548003-83548022 | MS.gene48412:intron | 40.0% | |
| TTGAGCATCAGACTTTGACT+TGG | - | chr3.2:83549705-83549724 | None:intergenic | 40.0% | |
| TTGCTTTCCCAGCAAAATCA+AGG | - | chr3.2:83546798-83546817 | None:intergenic | 40.0% | |
| ! | AAAGCGTTTAGGTTATTGGC+TGG | + | chr3.2:83543439-83543458 | MS.gene48412:intron | 40.0% |
| ! | ATTGAGGGGTATAAGGTTTC+TGG | + | chr3.2:83547242-83547261 | MS.gene48412:CDS | 40.0% |
| ! | ATTGCACAGAAGGGTCTTTT+TGG | + | chr3.2:83547794-83547813 | MS.gene48412:CDS | 40.0% |
| ! | ATTTTCTGAACTGTCCGGAT+GGG | - | chr3.2:83549416-83549435 | None:intergenic | 40.0% |
| ! | CAACTCTGAGAAGATCCAAA+AGG | - | chr3.2:83549364-83549383 | None:intergenic | 40.0% |
| ! | GAGGAGAGTATAACGAATAG+AGG | + | chr3.2:83548266-83548285 | MS.gene48412:intron | 40.0% |
| ! | GCCATTATTATTGTGGACTG+GGG | + | chr3.2:83545559-83545578 | MS.gene48412:CDS | 40.0% |
| ! | TATTTTCTGAACTGTCCGGA+TGG | - | chr3.2:83549417-83549436 | None:intergenic | 40.0% |
| ! | TCCTGAAAACACAGCTCTAA+AGG | + | chr3.2:83547827-83547846 | MS.gene48412:CDS | 40.0% |
| ! | TGCTGCTGTGTCATTATTCA+TGG | + | chr3.2:83546837-83546856 | MS.gene48412:CDS | 40.0% |
| ! | TGGCAGGTTGACATATATTC+TGG | + | chr3.2:83544975-83544994 | MS.gene48412:intron | 40.0% |
| ! | TTAGGTTATTGGCTGGAGTT+GGG | + | chr3.2:83543446-83543465 | MS.gene48412:intron | 40.0% |
| ! | TTGTCACACCATCTTTTACG+TGG | + | chr3.2:83543559-83543578 | MS.gene48412:CDS | 40.0% |
| ! | TTTAGGTTATTGGCTGGAGT+TGG | + | chr3.2:83543445-83543464 | MS.gene48412:intron | 40.0% |
| !! | CTTTGACTTGGACTTATCCT+TGG | - | chr3.2:83549693-83549712 | None:intergenic | 40.0% |
| !! | TGAGGAGTACCTTTGTGTTA+AGG | + | chr3.2:83548558-83548577 | MS.gene48412:CDS | 40.0% |
| !!! | ACCTTTAGAGCTGTGTTTTC+AGG | - | chr3.2:83547831-83547850 | None:intergenic | 40.0% |
| AAAAATCAGATGGGGGTAGG+AGG | - | chr3.2:83544134-83544153 | None:intergenic | 45.0% | |
| AAAATCAGATGGGGGTAGGA+GGG | - | chr3.2:83544133-83544152 | None:intergenic | 45.0% | |
| AACTTTCATGCTCCCTTGCA+GGG | + | chr3.2:83549173-83549192 | MS.gene48412:intron | 45.0% | |
| AAGGCAAAGATACCAAACCG+TGG | - | chr3.2:83549081-83549100 | None:intergenic | 45.0% | |
| AAGGCAATAATACCAAGGGC+TGG | - | chr3.2:83545312-83545331 | None:intergenic | 45.0% | |
| AATATACAGTGAGCCTGCCT+CGG | + | chr3.2:83549433-83549452 | MS.gene48412:CDS | 45.0% | |
| ACACAGAAGTGGTTAACTGC+TGG | + | chr3.2:83546877-83546896 | MS.gene48412:CDS | 45.0% | |
| ACAGTATTGCTCACTCTTGC+CGG | + | chr3.2:83546910-83546929 | MS.gene48412:CDS | 45.0% | |
| AGACCACAGATTAAGGACGA+TGG | + | chr3.2:83546176-83546195 | MS.gene48412:intron | 45.0% | |
| AGCAGTTAACCACTTCTGTG+TGG | - | chr3.2:83546878-83546897 | None:intergenic | 45.0% | |
| ATCAGCCTGTGCTTATTGTC+TGG | + | chr3.2:83543970-83543989 | MS.gene48412:intron | 45.0% | |
| ATCAGCTTGCAGTTGTGGTT+TGG | + | chr3.2:83544349-83544368 | MS.gene48412:intron | 45.0% | |
| ATTAGGACCCTTAAGAGACC+AGG | + | chr3.2:83544427-83544446 | MS.gene48412:intron | 45.0% | |
| CACACACACTAAGTGCCTTA+AGG | + | chr3.2:83544709-83544728 | MS.gene48412:intron | 45.0% | |
| CGTGTACTCCACGTAAAAGA+TGG | - | chr3.2:83543570-83543589 | None:intergenic | 45.0% | |
| GACCACAGATTAAGGACGAT+GGG | + | chr3.2:83546177-83546196 | MS.gene48412:intron | 45.0% | |
| GAGAGCAACAACGAGCTAAT+GGG | - | chr3.2:83544773-83544792 | None:intergenic | 45.0% | |
| GATGCTCAAACCCAGAACAT+GGG | + | chr3.2:83549716-83549735 | MS.gene48412:CDS | 45.0% | |
| GCCCCAGTCCACAATAATAA+TGG | - | chr3.2:83545563-83545582 | None:intergenic | 45.0% | |
| GCCTCGGAAAATATACCCTT+TGG | + | chr3.2:83549449-83549468 | MS.gene48412:CDS | 45.0% | |
| GGAGGTTTAACTGCTGATGA+TGG | - | chr3.2:83549962-83549981 | None:intergenic | 45.0% | |
| GTGATGTCCTGGTCTCTTAA+GGG | - | chr3.2:83544437-83544456 | None:intergenic | 45.0% | |
| GTTAGTGCGACTAAGGCATA+AGG | + | chr3.2:83548002-83548021 | MS.gene48412:intron | 45.0% | |
| TACGATCAGTCAACACTGTC+AGG | - | chr3.2:83545636-83545655 | None:intergenic | 45.0% | |
| TAGGTTTCTCCACACAGAAG+TGG | + | chr3.2:83546866-83546885 | MS.gene48412:CDS | 45.0% | |
| TAGTGCGACTAAGGCATAAG+GGG | + | chr3.2:83548004-83548023 | MS.gene48412:intron | 45.0% | |
| TCAACACTGTCAGGCACTTA+CGG | - | chr3.2:83545627-83545646 | None:intergenic | 45.0% | |
| TCGACGCCACATATCAATGT+GGG | + | chr3.2:83544475-83544494 | MS.gene48412:intron | 45.0% | |
| TCTACTTAGCTCAGCCTAGT+AGG | + | chr3.2:83548418-83548437 | MS.gene48412:intron | 45.0% | |
| TGATGCTCAAACCCAGAACA+TGG | + | chr3.2:83549715-83549734 | MS.gene48412:CDS | 45.0% | |
| TGGTTAACTGCTGGTGGTTT+GGG | + | chr3.2:83546886-83546905 | MS.gene48412:CDS | 45.0% | |
| TGTGATGTCCTGGTCTCTTA+AGG | - | chr3.2:83544438-83544457 | None:intergenic | 45.0% | |
| TTCCCATCGTCCTTAATCTG+TGG | - | chr3.2:83546182-83546201 | None:intergenic | 45.0% | |
| ! | ACACTATGTGCAGGGGTTTT+AGG | - | chr3.2:83549833-83549852 | None:intergenic | 45.0% |
| ! | AGATGGGCCTTGATTTTGCT+GGG | + | chr3.2:83546788-83546807 | MS.gene48412:intron | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3.2:83547743-83547762 | MS.gene48412:CDS | 45.0% |
| ! | CATGGGTTCTGATAGTTCAG+TGG | + | chr3.2:83549733-83549752 | MS.gene48412:CDS | 45.0% |
| ! | GAAACAGGAGGCAATCCTTT+TGG | + | chr3.2:83549346-83549365 | MS.gene48412:intron | 45.0% |
| ! | GAATCTTTTACCGCGCACTT+TGG | + | chr3.2:83543361-83543380 | MS.gene48412:CDS | 45.0% |
| ! | GGTAAAGTACTACATACCCG+AGG | + | chr3.2:83548579-83548598 | MS.gene48412:intron | 45.0% |
| ! | GTCTGAGATGGCAGGATTAT+TGG | - | chr3.2:83545685-83545704 | None:intergenic | 45.0% |
| ! | TCCTACCCCCATCTGATTTT+TGG | + | chr3.2:83544133-83544152 | MS.gene48412:intron | 45.0% |
| ! | TGCTCTGGATCGAGTGAAAA+TGG | - | chr3.2:83549480-83549499 | None:intergenic | 45.0% |
| !! | AAGGGTATATTTTCCGAGGC+AGG | - | chr3.2:83549449-83549468 | None:intergenic | 45.0% |
| !! | AGTTTGCTGTCCAACGGAAT+GGG | + | chr3.2:83550086-83550105 | MS.gene48412:CDS | 45.0% |
| !! | CACAAGAGTTTGCTGTCCAA+CGG | + | chr3.2:83550080-83550099 | MS.gene48412:CDS | 45.0% |
| !! | CCCAAAGGGTATATTTTCCG+AGG | - | chr3.2:83549453-83549472 | None:intergenic | 45.0% |
| !! | TAAGGTTTCTGGCACTGTTG+AGG | + | chr3.2:83547253-83547272 | MS.gene48412:CDS | 45.0% |
| !! | TCTTTTTCTAGCATGTGGGC+TGG | + | chr3.2:83547449-83547468 | MS.gene48412:intron | 45.0% |
| !!! | ACTCTTTTTTCACCCCTGCA+AGG | - | chr3.2:83549189-83549208 | None:intergenic | 45.0% |
| !!! | CTCTTTTTTCACCCCTGCAA+GGG | - | chr3.2:83549188-83549207 | None:intergenic | 45.0% |
| !!! | GGTTTGGCCTCTAGTTTTCT+AGG | - | chr3.2:83548319-83548338 | None:intergenic | 45.0% |
| !!! | AGTTATTTTTATTTATTAAA+TGG | + | chr3.2:83547332-83547351 | MS.gene48412:intron | 5.0% |
| !!! | ATTAAACTTATTTTTTTAAA+AGG | - | chr3.2:83548092-83548111 | None:intergenic | 5.0% |
| !!! | GTTATTTTTATTTATTAAAT+GGG | + | chr3.2:83547333-83547352 | MS.gene48412:intron | 5.0% |
| AAATCAGATGGGGGTAGGAG+GGG | - | chr3.2:83544132-83544151 | None:intergenic | 50.0% | |
| AAGATACCAAACCGTGGTCG+TGG | - | chr3.2:83549075-83549094 | None:intergenic | 50.0% | |
| ACTTTCATGCTCCCTTGCAG+GGG | + | chr3.2:83549174-83549193 | MS.gene48412:intron | 50.0% | |
| AGTGCGCGGTAAAAGATTCG+TGG | - | chr3.2:83543360-83543379 | None:intergenic | 50.0% | |
| ATACCAAACGTGGGGAGTCT+TGG | - | chr3.2:83544803-83544822 | None:intergenic | 50.0% | |
| ATCCTGCTGAGACGAAGTAG+TGG | - | chr3.2:83545354-83545373 | None:intergenic | 50.0% | |
| CAACACTGTCAGGCACTTAC+GGG | - | chr3.2:83545626-83545645 | None:intergenic | 50.0% | |
| CACATTGATATGTGGCGTCG+AGG | - | chr3.2:83544476-83544495 | None:intergenic | 50.0% | |
| CAGAAGTGGTTAACTGCTGG+TGG | + | chr3.2:83546880-83546899 | MS.gene48412:CDS | 50.0% | |
| CGAGAGCAACAACGAGCTAA+TGG | - | chr3.2:83544774-83544793 | None:intergenic | 50.0% | |
| CTCGACGCCACATATCAATG+TGG | + | chr3.2:83544474-83544493 | MS.gene48412:intron | 50.0% | |
| CTTCTTGGGGTTGCACTTGA+AGG | + | chr3.2:83549998-83550017 | MS.gene48412:CDS | 50.0% | |
| GAACTTTCATGCTCCCTTGC+AGG | + | chr3.2:83549172-83549191 | MS.gene48412:intron | 50.0% | |
| GACCAAAGACTAGGGACAGA+AGG | - | chr3.2:83545958-83545977 | None:intergenic | 50.0% | |
| GCCAAAAATCAGATGGGGGT+AGG | - | chr3.2:83544137-83544156 | None:intergenic | 50.0% | |
| GCGGCTGCACAACATTAGAT+AGG | + | chr3.2:83548122-83548141 | MS.gene48412:intron | 50.0% | |
| GCTGAGCTAAGTAGACTCCA+TGG | - | chr3.2:83548413-83548432 | None:intergenic | 50.0% | |
| GTGGTTAACTGCTGGTGGTT+TGG | + | chr3.2:83546885-83546904 | MS.gene48412:CDS | 50.0% | |
| GTTTGACACTAGACGACCTC+TGG | - | chr3.2:83544084-83544103 | None:intergenic | 50.0% | |
| TACCAAACGTGGGGAGTCTT+GGG | - | chr3.2:83544802-83544821 | None:intergenic | 50.0% | |
| TCGTTCAACTCGTGGCAATG+AGG | + | chr3.2:83549574-83549593 | MS.gene48412:CDS | 50.0% | |
| TCTTGTGACTCAGCCGAGTT+AGG | - | chr3.2:83550067-83550086 | None:intergenic | 50.0% | |
| TGCCACAGGTTCATCAACCT+TGG | - | chr3.2:83549609-83549628 | None:intergenic | 50.0% | |
| TTCAGAGGACTGACAGCAGT+TGG | + | chr3.2:83545495-83545514 | MS.gene48412:intron | 50.0% | |
| TTGTCAGTCATCATCGAGCC+CGG | + | chr3.2:83549381-83549400 | MS.gene48412:CDS | 50.0% | |
| ! | CAGATGGGCCTTGATTTTGC+TGG | + | chr3.2:83546787-83546806 | MS.gene48412:intron | 50.0% |
| ! | CCACGAGTTGAACGAGTTGA+CGG | - | chr3.2:83549569-83549588 | None:intergenic | 50.0% |
| ! | CTCCTTCTGTCCCTAGTCTT+TGG | + | chr3.2:83545953-83545972 | MS.gene48412:intron | 50.0% |
| ! | CTTCGATTGATTCCAGCCCT+TGG | + | chr3.2:83545297-83545316 | MS.gene48412:CDS | 50.0% |
| ! | TAGATGGCGCATGCCTTGTT+GGG | - | chr3.2:83543594-83543613 | None:intergenic | 50.0% |
| !! | ACGACCTGACTAGTCTGAGA+TGG | - | chr3.2:83545697-83545716 | None:intergenic | 50.0% |
| !! | GAGTTTGCTGTCCAACGGAA+TGG | + | chr3.2:83550085-83550104 | MS.gene48412:CDS | 50.0% |
| !! | GTGAGTTGTTGGTTCCACGT+CGG | + | chr3.2:83544537-83544556 | MS.gene48412:intron | 50.0% |
| !! | TGCCAAGGTTGATGAACCTG+TGG | + | chr3.2:83549604-83549623 | MS.gene48412:CDS | 50.0% |
| !!! | CTTTTGGAGTCTGATGCCAC+AGG | - | chr3.2:83549623-83549642 | None:intergenic | 50.0% |
| !!! | TGTGCAGGGGTTTTAGGTAC+AGG | - | chr3.2:83549827-83549846 | None:intergenic | 50.0% |
| !!! | TTTTCTAGCATGTGGGCTGG+TGG | + | chr3.2:83547452-83547471 | MS.gene48412:intron | 50.0% |
| AATCAGATGGGGGTAGGAGG+GGG | - | chr3.2:83544131-83544150 | None:intergenic | 55.0% | |
| ACAGTGGTGTACCTCTCGAC+CGG | - | chr3.2:83546932-83546951 | None:intergenic | 55.0% | |
| ACCAAACGTGGGGAGTCTTG+GGG | - | chr3.2:83544801-83544820 | None:intergenic | 55.0% | |
| AGCCACTACTTCGTCTCAGC+AGG | + | chr3.2:83545349-83545368 | MS.gene48412:CDS | 55.0% | |
| ATGTCGCTCTGCCATCCTAC+CGG | + | chr3.2:83543630-83543649 | MS.gene48412:CDS | 55.0% | |
| CAACAAGGCATGCGCCATCT+AGG | + | chr3.2:83543593-83543612 | MS.gene48412:CDS | 55.0% | |
| CCGTCAACTCGTTCAACTCG+TGG | + | chr3.2:83549566-83549585 | MS.gene48412:CDS | 55.0% | |
| CTAGATGGCGCATGCCTTGT+TGG | - | chr3.2:83543595-83543614 | None:intergenic | 55.0% | |
| CTGATTCTCAGCCACGACCA+CGG | + | chr3.2:83549061-83549080 | MS.gene48412:intron | 55.0% | |
| CTGGGGCAATGCTCATATGC+AGG | + | chr3.2:83545576-83545595 | MS.gene48412:CDS | 55.0% | |
| GACTCAGCCGAGTTAGGAGA+TGG | - | chr3.2:83550061-83550080 | None:intergenic | 55.0% | |
| GAGGTCCATTCCCATTCCGT+TGG | - | chr3.2:83550099-83550118 | None:intergenic | 55.0% | |
| GCTGTCCAACGGAATGGGAA+TGG | + | chr3.2:83550091-83550110 | MS.gene48412:CDS | 55.0% | |
| TGACACTAGACGACCTCTGG+TGG | - | chr3.2:83544081-83544100 | None:intergenic | 55.0% | |
| TGGGTGGAGATGTGATGTCC+TGG | - | chr3.2:83544448-83544467 | None:intergenic | 55.0% | |
| TGTCTGCCCTGCTAGACTCA+TGG | - | chr3.2:83549886-83549905 | None:intergenic | 55.0% | |
| ! | AGATGGCGCATGCCTTGTTG+GGG | - | chr3.2:83543593-83543612 | None:intergenic | 55.0% |
| ! | ATGTGGCGTCGAGGTCTCTT+GGG | - | chr3.2:83544467-83544486 | None:intergenic | 55.0% |
| ! | CCTGCCATCTCAGACTAGTC+AGG | + | chr3.2:83545690-83545709 | MS.gene48412:CDS | 55.0% |
| ! | GCGTACCCCCATCCAACTTT+TGG | + | chr3.2:83544941-83544960 | MS.gene48412:intron | 55.0% |
| ! | TATGTGGCGTCGAGGTCTCT+TGG | - | chr3.2:83544468-83544487 | None:intergenic | 55.0% |
| !! | CCTGACTAGTCTGAGATGGC+AGG | - | chr3.2:83545693-83545712 | None:intergenic | 55.0% |
| ACCCCAAGACTCCCCACGTT+TGG | + | chr3.2:83544797-83544816 | MS.gene48412:intron | 60.0% | |
| ATCAGATGGGGGTAGGAGGG+GGG | - | chr3.2:83544130-83544149 | None:intergenic | 60.0% | |
| CTGAACTGTCCGGATGGGAG+TGG | - | chr3.2:83549411-83549430 | None:intergenic | 60.0% | |
| GTGGAGTACACGCCCCAACA+AGG | + | chr3.2:83543578-83543597 | MS.gene48412:CDS | 60.0% | |
| TCCGGATGGGAGTGGCTAAC+CGG | - | chr3.2:83549403-83549422 | None:intergenic | 60.0% | |
| TCTCAGCCACGACCACGGTT+TGG | + | chr3.2:83549066-83549085 | MS.gene48412:intron | 60.0% | |
| TGTAATCGTCCAACCCGCGC+CGG | - | chr3.2:83543329-83543348 | None:intergenic | 60.0% | |
| TGTCGCTCTGCCATCCTACC+GGG | + | chr3.2:83543631-83543650 | MS.gene48412:CDS | 60.0% | |
| CCGGATGGGAGTGGCTAACC+GGG | - | chr3.2:83549402-83549421 | None:intergenic | 65.0% | |
| CGGGCGATTCACTGCTGCTC+TGG | - | chr3.2:83549495-83549514 | None:intergenic | 65.0% | |
| GCTCACTCTTGCCGGTCGAG+AGG | + | chr3.2:83546918-83546937 | MS.gene48412:CDS | 65.0% | |
| TCTGCCATCCTACCGGGTGG+TGG | + | chr3.2:83543637-83543656 | MS.gene48412:CDS | 65.0% | |
| ! | CCCGGTTAGCCACTCCCATC+CGG | + | chr3.2:83549399-83549418 | MS.gene48412:CDS | 65.0% |
| ! | TGGCGTCGAGGTCTCTTGGG+TGG | - | chr3.2:83544464-83544483 | None:intergenic | 65.0% |
| !! | CCATCCTACCGGGTGGTGGA+GGG | + | chr3.2:83543641-83543660 | MS.gene48412:CDS | 65.0% |
| !! | TACCGGGTGGTGGAGGGAGT+GGG | + | chr3.2:83543647-83543666 | MS.gene48412:CDS | 65.0% |
| CACTCCCTCCACCACCCGGT+AGG | - | chr3.2:83543648-83543667 | None:intergenic | 70.0% | |
| CCCTCCACCACCCGGTAGGA+TGG | - | chr3.2:83543644-83543663 | None:intergenic | 70.0% | |
| CGCTCTGCCATCCTACCGGG+TGG | + | chr3.2:83543634-83543653 | MS.gene48412:CDS | 70.0% | |
| GTCCCACTCCCTCCACCACC+CGG | - | chr3.2:83543652-83543671 | None:intergenic | 70.0% | |
| ! | GCCATCCTACCGGGTGGTGG+AGG | + | chr3.2:83543640-83543659 | MS.gene48412:CDS | 70.0% |
| !! | CTACCGGGTGGTGGAGGGAG+TGG | + | chr3.2:83543646-83543665 | MS.gene48412:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83543323 | 83550183 | 83543323 | ID=MS.gene48412 |
| chr3.2 | mRNA | 83543323 | 83550183 | 83543323 | ID=MS.gene48412.t1;Parent=MS.gene48412 |
| chr3.2 | exon | 83543323 | 83543382 | 83543323 | ID=MS.gene48412.t1.exon1;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83543323 | 83543382 | 83543323 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83543547 | 83543707 | 83543547 | ID=MS.gene48412.t1.exon2;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83543547 | 83543707 | 83543547 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83545263 | 83545386 | 83545263 | ID=MS.gene48412.t1.exon3;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83545263 | 83545386 | 83545263 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83545500 | 83545597 | 83545500 | ID=MS.gene48412.t1.exon4;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83545500 | 83545597 | 83545500 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83545672 | 83545785 | 83545672 | ID=MS.gene48412.t1.exon5;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83545672 | 83545785 | 83545672 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83546365 | 83546425 | 83546365 | ID=MS.gene48412.t1.exon6;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83546365 | 83546425 | 83546365 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83546790 | 83546939 | 83546790 | ID=MS.gene48412.t1.exon7;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83546790 | 83546939 | 83546790 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83547164 | 83547274 | 83547164 | ID=MS.gene48412.t1.exon8;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83547164 | 83547274 | 83547164 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83547460 | 83547627 | 83547460 | ID=MS.gene48412.t1.exon9;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83547460 | 83547627 | 83547460 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83547735 | 83547848 | 83547735 | ID=MS.gene48412.t1.exon10;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83547735 | 83547848 | 83547735 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83548523 | 83548579 | 83548523 | ID=MS.gene48412.t1.exon11;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83548523 | 83548579 | 83548523 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| chr3.2 | exon | 83549353 | 83550183 | 83549353 | ID=MS.gene48412.t1.exon12;Parent=MS.gene48412.t1 |
| chr3.2 | CDS | 83549353 | 83550183 | 83549353 | ID=cds.MS.gene48412.t1;Parent=MS.gene48412.t1 |
| Gene Sequence |
| Protein sequence |
