Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057132.t1 | XP_003602283.2 | 72.9 | 306 | 13 | 3 | 1 | 236 | 1 | 306 | 6.60E-100 | 373.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057132.t1 | Q8LAP8 | 66.3 | 101 | 20 | 3 | 1 | 89 | 1 | 99 | 2.1e-30 | 134.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057132.t1 | G7J7H3 | 72.9 | 306 | 13 | 3 | 1 | 236 | 1 | 306 | 4.8e-100 | 373.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene057132.t1 | TF | C2C2-Dof |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene057132 | 0.857408 | 1.67E-62 | -1.69E-46 |
| MS.gene049350 | MS.gene057132 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene057132 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene057132 | 0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene057132 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene057132 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene057132 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene057132 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene057132 | 0.810853 | 9.37E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene057132 | -0.804605 | 1.99E-49 | -1.69E-46 |
| MS.gene053541 | MS.gene057132 | 0.810037 | 1.41E-50 | -1.69E-46 |
| MS.gene053542 | MS.gene057132 | 0.815059 | 1.12E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene057132 | 0.831952 | 1.25E-55 | -1.69E-46 |
| MS.gene05458 | MS.gene057132 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene057132 | 0.808233 | 3.42E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene057132 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene056519 | MS.gene057132 | 0.803617 | 3.20E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene057132 | 0.821655 | 3.60E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene058010 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene058339 | 0.821923 | 3.12E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene058781 | 0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene058783 | 0.802134 | 6.48E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene05894 | 0.85019 | 1.99E-60 | -1.69E-46 |
| MS.gene057132 | MS.gene059778 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene060935 | 0.807514 | 4.87E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene060937 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene060962 | 0.849305 | 3.52E-60 | -1.69E-46 |
| MS.gene057132 | MS.gene061100 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene061188 | 0.828034 | 1.12E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene061335 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene06133 | 0.847656 | 1.01E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene061707 | 0.814462 | 1.52E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene061872 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene062156 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene062183 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene062184 | 0.813404 | 2.60E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene063149 | 0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene063478 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene06469 | 0.814953 | 1.18E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene065979 | 0.81628 | 6.00E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene066196 | 0.819753 | 9.84E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene06672 | 0.863351 | 2.65E-64 | -1.69E-46 |
| MS.gene057132 | MS.gene06723 | 0.812364 | 4.40E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene06890 | 0.922552 | 8.48E-89 | -1.69E-46 |
| MS.gene057132 | MS.gene068992 | 0.820012 | 8.59E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene06940 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene069852 | 0.815164 | 1.06E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene070301 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene072116 | 0.84766 | 1.00E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene07294 | 0.814381 | 1.59E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene073083 | 0.815458 | 9.15E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene073132 | 0.804377 | 2.22E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene074604 | 0.812445 | 4.22E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene07486 | 0.813499 | 2.48E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene07510 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene07723 | 0.824489 | 7.85E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene07876 | 0.828032 | 1.13E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene08532 | 0.828175 | 1.04E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene08963 | 0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene09021 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene09224 | 0.821298 | 4.35E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene09600 | 0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene20298 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene20809 | 0.82306 | 1.70E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene20859 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene21536 | 0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene21613 | 0.820265 | 7.52E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene22023 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene23902 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene23932 | 0.80168 | 8.03E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene24633 | 0.831205 | 1.91E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene25269 | 0.80054 | 1.37E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene25435 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene26380 | 0.813268 | 2.79E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene26659 | 0.810469 | 1.13E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene27206 | 0.806002 | 1.02E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene27646 | -0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene27860 | 0.801564 | 8.49E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene29600 | 0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene29631 | 0.810603 | 1.06E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene29807 | 0.806674 | 7.34E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene30350 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene31028 | 0.801185 | 1.01E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene31111 | 0.81557 | 8.64E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene34164 | 0.804966 | 1.68E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene34266 | 0.812026 | 5.22E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene34937 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene35071 | 0.819866 | 9.27E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene35218 | 0.802695 | 4.97E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene35375 | 0.815955 | 7.09E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene35528 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene35529 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene35575 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene35703 | 0.824571 | 7.51E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene35858 | 0.844412 | 7.68E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene36334 | 0.821126 | 4.76E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene37007 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene39046 | 0.801122 | 1.04E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene39882 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene40068 | 0.80723 | 5.59E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene40079 | 0.814356 | 1.61E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene40157 | 0.855873 | 4.71E-62 | -1.69E-46 |
| MS.gene057132 | MS.gene42310 | 0.804475 | 2.12E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene42653 | 0.803948 | 2.73E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene44179 | 0.815806 | 7.66E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene44304 | 0.816324 | 5.86E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene44434 | 0.818233 | 2.18E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene44437 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene44510 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene45425 | 0.805059 | 1.60E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene45488 | 0.830097 | 3.56E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene45613 | 0.825642 | 4.19E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene46189 | 0.801125 | 1.04E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene47276 | 0.801275 | 9.72E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene47390 | 0.807514 | 4.87E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene47601 | 0.834556 | 2.80E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene47768 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene48412 | -0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene48519 | 0.952422 | 2.51E-110 | -1.69E-46 |
| MS.gene057132 | MS.gene49320 | 0.821379 | 4.17E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene49883 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene51788 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene51789 | 0.81808 | 2.36E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene51818 | 0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene51877 | 0.819862 | 9.29E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene53321 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene53376 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene54158 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene54197 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene54967 | 0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene55101 | 0.834193 | 3.45E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene56169 | 0.833992 | 3.88E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene57130 | 0.821495 | 3.92E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene60171 | 0.806872 | 6.66E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene60174 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene60566 | 0.802432 | 5.63E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene60687 | -0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene60935 | 0.837224 | 5.90E-57 | -1.69E-46 |
| MS.gene057132 | MS.gene61948 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene62387 | 0.800153 | 1.65E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene62491 | 0.839904 | 1.20E-57 | -1.69E-46 |
| MS.gene057132 | MS.gene64361 | 0.810489 | 1.12E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene65274 | 0.825517 | 4.49E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene65300 | 0.810582 | 1.07E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene66700 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene67631 | 0.80147 | 8.87E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene68204 | 0.845329 | 4.35E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene68442 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene68543 | 0.809921 | 1.49E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene69459 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene70283 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene71236 | 0.823884 | 1.09E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene71718 | 0.827693 | 1.36E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene71891 | -0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene74138 | 0.829409 | 5.23E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene74537 | 0.83158 | 1.54E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene74904 | 0.820176 | 7.88E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene75437 | 0.812746 | 3.63E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene75990 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene76314 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene76518 | 0.832208 | 1.08E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene80201 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene80631 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene80687 | 0.803452 | 3.46E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene80729 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene80732 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene81751 | 0.823197 | 1.58E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene82568 | 0.802229 | 6.20E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene82600 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene83055 | 0.823019 | 1.73E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene83864 | 0.845966 | 2.92E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene84426 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene84454 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene85133 | 0.83257 | 8.77E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene86799 | 0.809365 | 1.96E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene86826 | 0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene88170 | 0.813006 | 3.18E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene88171 | 0.83364 | 4.75E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene90386 | 0.814981 | 1.17E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene90880 | 0.825245 | 5.21E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene92981 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene93025 | 0.859337 | 4.44E-63 | -1.69E-46 |
| MS.gene057132 | MS.gene94056 | 0.813316 | 2.72E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene95562 | 0.806343 | 8.62E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene95712 | 0.841708 | 4.03E-58 | -1.69E-46 |
| MS.gene057132 | MS.gene95728 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene96190 | 0.816337 | 5.83E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene96191 | 0.831184 | 1.93E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene96315 | 0.807061 | 6.07E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene97017 | 0.856399 | 3.30E-62 | -1.69E-46 |
| MS.gene057132 | MS.gene98611 | 0.816236 | 6.14E-52 | -1.69E-46 |
| MS.gene057132 | MS.gene99140 | 0.803659 | 3.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057132.t1 | MTR_3g091820 | 98.969 | 194 | 1 | 1 | 1 | 193 | 1 | 194 | 5.89e-139 | 392 |
| MS.gene057132.t1 | MTR_3g091820 | 85.714 | 42 | 6 | 0 | 195 | 236 | 265 | 306 | 9.11e-16 | 75.1 |
| MS.gene057132.t1 | MTR_8g027295 | 50.769 | 195 | 78 | 6 | 17 | 209 | 1 | 179 | 2.09e-53 | 173 |
| MS.gene057132.t1 | MTR_1g077600 | 48.095 | 210 | 73 | 9 | 1 | 204 | 1 | 180 | 2.32e-44 | 150 |
| MS.gene057132.t1 | MTR_1g077600 | 48.095 | 210 | 73 | 9 | 1 | 204 | 1 | 180 | 2.76e-44 | 150 |
| MS.gene057132.t1 | MTR_2g093220 | 86.364 | 66 | 9 | 0 | 32 | 97 | 29 | 94 | 1.97e-37 | 132 |
| MS.gene057132.t1 | MTR_3g077750 | 62.500 | 96 | 28 | 2 | 5 | 93 | 17 | 111 | 8.22e-36 | 129 |
| MS.gene057132.t1 | MTR_4g022370 | 48.322 | 149 | 63 | 3 | 19 | 163 | 54 | 192 | 2.45e-34 | 126 |
| MS.gene057132.t1 | MTR_4g461080 | 56.897 | 116 | 49 | 1 | 32 | 147 | 18 | 132 | 1.47e-33 | 122 |
| MS.gene057132.t1 | MTR_3g090430 | 61.798 | 89 | 30 | 1 | 13 | 97 | 17 | 105 | 1.24e-32 | 121 |
| MS.gene057132.t1 | MTR_4g063780 | 50.769 | 130 | 54 | 3 | 28 | 149 | 56 | 183 | 6.89e-32 | 119 |
| MS.gene057132.t1 | MTR_2g096740 | 68.354 | 79 | 22 | 1 | 32 | 107 | 66 | 144 | 2.13e-31 | 117 |
| MS.gene057132.t1 | MTR_2g096740 | 68.354 | 79 | 22 | 1 | 32 | 107 | 51 | 129 | 2.31e-31 | 117 |
| MS.gene057132.t1 | MTR_8g068210 | 67.568 | 74 | 24 | 0 | 32 | 105 | 21 | 94 | 3.07e-31 | 117 |
| MS.gene057132.t1 | MTR_7g024670 | 53.774 | 106 | 44 | 1 | 11 | 111 | 40 | 145 | 2.72e-30 | 115 |
| MS.gene057132.t1 | MTR_1g056810 | 87.037 | 54 | 7 | 0 | 44 | 97 | 13 | 66 | 5.17e-30 | 113 |
| MS.gene057132.t1 | MTR_8g479350 | 49.580 | 119 | 44 | 3 | 38 | 156 | 63 | 165 | 1.19e-29 | 113 |
| MS.gene057132.t1 | MTR_7g059400 | 64.865 | 74 | 22 | 1 | 28 | 97 | 57 | 130 | 3.21e-29 | 112 |
| MS.gene057132.t1 | MTR_4g088580 | 50.000 | 122 | 44 | 3 | 45 | 164 | 57 | 163 | 5.82e-29 | 112 |
| MS.gene057132.t1 | MTR_2g014060 | 70.769 | 65 | 14 | 1 | 30 | 94 | 17 | 76 | 1.51e-28 | 110 |
| MS.gene057132.t1 | MTR_8g079060 | 56.627 | 83 | 35 | 1 | 33 | 114 | 18 | 100 | 2.40e-28 | 107 |
| MS.gene057132.t1 | MTR_3g435480 | 53.763 | 93 | 40 | 1 | 32 | 124 | 125 | 214 | 2.85e-28 | 111 |
| MS.gene057132.t1 | MTR_8g015840 | 71.212 | 66 | 17 | 2 | 37 | 101 | 15 | 79 | 6.41e-28 | 106 |
| MS.gene057132.t1 | MTR_4g089095 | 65.789 | 76 | 21 | 2 | 26 | 97 | 29 | 103 | 1.20e-27 | 107 |
| MS.gene057132.t1 | MTR_2g059540 | 86.000 | 50 | 7 | 0 | 42 | 91 | 30 | 79 | 1.89e-27 | 104 |
| MS.gene057132.t1 | MTR_5g031440 | 77.778 | 54 | 12 | 0 | 40 | 93 | 40 | 93 | 1.99e-27 | 107 |
| MS.gene057132.t1 | MTR_2g014170 | 58.427 | 89 | 27 | 1 | 3 | 91 | 15 | 93 | 4.10e-27 | 106 |
| MS.gene057132.t1 | MTR_4g089095 | 77.193 | 57 | 12 | 1 | 41 | 97 | 14 | 69 | 5.28e-27 | 104 |
| MS.gene057132.t1 | MTR_2g013370 | 64.706 | 68 | 23 | 1 | 30 | 97 | 33 | 99 | 9.79e-27 | 104 |
| MS.gene057132.t1 | MTR_4g082060 | 58.904 | 73 | 30 | 0 | 29 | 101 | 108 | 180 | 1.22e-26 | 107 |
| MS.gene057132.t1 | MTR_7g010950 | 68.852 | 61 | 19 | 0 | 40 | 100 | 132 | 192 | 1.23e-26 | 107 |
| MS.gene057132.t1 | MTR_4g109980 | 77.358 | 53 | 12 | 0 | 41 | 93 | 38 | 90 | 1.59e-26 | 104 |
| MS.gene057132.t1 | MTR_6g012450 | 52.688 | 93 | 37 | 1 | 8 | 100 | 108 | 193 | 3.62e-26 | 105 |
| MS.gene057132.t1 | MTR_8g044220 | 59.701 | 67 | 27 | 0 | 32 | 98 | 107 | 173 | 5.60e-26 | 105 |
| MS.gene057132.t1 | MTR_7g086780 | 56.098 | 82 | 32 | 1 | 23 | 100 | 75 | 156 | 8.36e-26 | 104 |
| MS.gene057132.t1 | MTR_5g041420 | 58.108 | 74 | 31 | 0 | 30 | 103 | 125 | 198 | 1.45e-25 | 102 |
| MS.gene057132.t1 | MTR_6g027450 | 55.405 | 74 | 33 | 0 | 27 | 100 | 73 | 146 | 6.96e-25 | 100 |
| MS.gene057132.t1 | MTR_2g016030 | 64.912 | 57 | 20 | 0 | 40 | 96 | 44 | 100 | 2.40e-24 | 95.1 |
| MS.gene057132.t1 | MTR_6g027460 | 47.872 | 94 | 47 | 1 | 27 | 118 | 80 | 173 | 3.82e-24 | 99.4 |
| MS.gene057132.t1 | MTR_5g041530 | 58.209 | 67 | 28 | 0 | 30 | 96 | 127 | 193 | 5.40e-23 | 96.3 |
| MS.gene057132.t1 | MTR_5g041380 | 60.606 | 66 | 26 | 0 | 40 | 105 | 124 | 189 | 4.54e-22 | 93.6 |
| MS.gene057132.t1 | MTR_5g041400 | 60.606 | 66 | 26 | 0 | 40 | 105 | 116 | 181 | 4.59e-22 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057132.t1 | AT4G24060 | 52.601 | 173 | 59 | 5 | 1 | 155 | 1 | 168 | 1.20e-43 | 150 |
| MS.gene057132.t1 | AT3G61850 | 39.316 | 234 | 73 | 7 | 1 | 188 | 1 | 211 | 6.15e-42 | 145 |
| MS.gene057132.t1 | AT3G61850 | 35.099 | 302 | 124 | 11 | 1 | 236 | 1 | 296 | 4.03e-41 | 142 |
| MS.gene057132.t1 | AT3G61850 | 49.112 | 169 | 58 | 6 | 29 | 188 | 50 | 199 | 1.49e-40 | 141 |
| MS.gene057132.t1 | AT3G61850 | 38.589 | 241 | 109 | 9 | 29 | 236 | 50 | 284 | 7.51e-40 | 139 |
| MS.gene057132.t1 | AT3G61850 | 38.589 | 241 | 109 | 9 | 29 | 236 | 50 | 284 | 7.51e-40 | 139 |
| MS.gene057132.t1 | AT1G64620 | 66.667 | 99 | 23 | 3 | 1 | 91 | 1 | 97 | 9.90e-40 | 140 |
| MS.gene057132.t1 | AT5G60200 | 54.545 | 121 | 46 | 2 | 9 | 120 | 12 | 132 | 9.58e-38 | 132 |
| MS.gene057132.t1 | AT2G46590 | 54.321 | 162 | 50 | 6 | 17 | 171 | 44 | 188 | 5.58e-36 | 130 |
| MS.gene057132.t1 | AT2G46590 | 53.503 | 157 | 59 | 5 | 17 | 171 | 56 | 200 | 6.68e-36 | 130 |
| MS.gene057132.t1 | AT3G55370 | 71.951 | 82 | 18 | 2 | 29 | 106 | 59 | 139 | 1.68e-34 | 125 |
| MS.gene057132.t1 | AT3G55370 | 71.951 | 82 | 18 | 2 | 29 | 106 | 104 | 184 | 2.35e-34 | 126 |
| MS.gene057132.t1 | AT3G55370 | 71.951 | 82 | 18 | 2 | 29 | 106 | 59 | 139 | 2.35e-34 | 126 |
| MS.gene057132.t1 | AT2G28510 | 51.538 | 130 | 42 | 3 | 41 | 150 | 46 | 174 | 2.57e-34 | 124 |
| MS.gene057132.t1 | AT5G60850 | 70.270 | 74 | 22 | 0 | 41 | 114 | 49 | 122 | 1.83e-32 | 120 |
| MS.gene057132.t1 | AT4G00940 | 60.185 | 108 | 35 | 2 | 30 | 131 | 57 | 162 | 2.59e-32 | 119 |
| MS.gene057132.t1 | AT4G00940 | 60.185 | 108 | 35 | 2 | 30 | 131 | 57 | 162 | 2.59e-32 | 119 |
| MS.gene057132.t1 | AT4G00940 | 60.185 | 108 | 35 | 2 | 30 | 131 | 57 | 162 | 2.59e-32 | 119 |
| MS.gene057132.t1 | AT3G45610 | 76.190 | 63 | 15 | 0 | 40 | 102 | 37 | 99 | 3.36e-32 | 118 |
| MS.gene057132.t1 | AT1G51700 | 71.831 | 71 | 18 | 2 | 37 | 106 | 28 | 97 | 6.36e-31 | 113 |
| MS.gene057132.t1 | AT5G65590 | 60.227 | 88 | 30 | 1 | 16 | 103 | 19 | 101 | 2.17e-30 | 115 |
| MS.gene057132.t1 | AT2G37590 | 67.123 | 73 | 21 | 1 | 29 | 98 | 72 | 144 | 2.63e-30 | 115 |
| MS.gene057132.t1 | AT3G52440 | 82.759 | 58 | 10 | 0 | 45 | 102 | 27 | 84 | 3.84e-30 | 112 |
| MS.gene057132.t1 | AT3G52440 | 82.759 | 58 | 10 | 0 | 45 | 102 | 46 | 103 | 4.17e-30 | 113 |
| MS.gene057132.t1 | AT5G62940 | 77.049 | 61 | 14 | 0 | 33 | 93 | 63 | 123 | 5.27e-30 | 115 |
| MS.gene057132.t1 | AT5G02460 | 66.216 | 74 | 21 | 1 | 28 | 97 | 76 | 149 | 7.80e-30 | 115 |
| MS.gene057132.t1 | AT1G21340 | 81.034 | 58 | 11 | 0 | 45 | 102 | 40 | 97 | 2.53e-29 | 110 |
| MS.gene057132.t1 | AT3G21270 | 84.906 | 53 | 8 | 0 | 43 | 95 | 29 | 81 | 5.72e-29 | 108 |
| MS.gene057132.t1 | AT1G28310 | 81.818 | 55 | 10 | 0 | 43 | 97 | 27 | 81 | 1.77e-28 | 109 |
| MS.gene057132.t1 | AT1G07640 | 65.278 | 72 | 22 | 1 | 29 | 97 | 60 | 131 | 2.32e-28 | 110 |
| MS.gene057132.t1 | AT1G28310 | 81.818 | 55 | 10 | 0 | 43 | 97 | 51 | 105 | 2.43e-28 | 110 |
| MS.gene057132.t1 | AT1G07640 | 65.278 | 72 | 22 | 1 | 29 | 97 | 4 | 75 | 2.78e-28 | 108 |
| MS.gene057132.t1 | AT1G07640 | 65.278 | 72 | 22 | 1 | 29 | 97 | 68 | 139 | 3.19e-28 | 109 |
| MS.gene057132.t1 | AT5G66940 | 69.565 | 69 | 19 | 2 | 38 | 105 | 28 | 95 | 1.02e-27 | 105 |
| MS.gene057132.t1 | AT2G28810 | 67.188 | 64 | 20 | 1 | 31 | 94 | 66 | 128 | 1.37e-27 | 107 |
| MS.gene057132.t1 | AT4G38000 | 62.162 | 74 | 27 | 1 | 24 | 96 | 22 | 95 | 1.87e-27 | 105 |
| MS.gene057132.t1 | AT2G28810 | 67.188 | 64 | 20 | 1 | 31 | 94 | 83 | 145 | 2.28e-27 | 107 |
| MS.gene057132.t1 | AT3G50410 | 69.841 | 63 | 17 | 1 | 37 | 97 | 22 | 84 | 4.84e-27 | 104 |
| MS.gene057132.t1 | AT4G21050 | 71.875 | 64 | 17 | 1 | 45 | 108 | 26 | 88 | 1.16e-26 | 102 |
| MS.gene057132.t1 | AT1G47655 | 73.214 | 56 | 15 | 0 | 37 | 92 | 23 | 78 | 2.38e-26 | 102 |
| MS.gene057132.t1 | AT1G69570 | 67.742 | 62 | 20 | 0 | 35 | 96 | 124 | 185 | 8.70e-26 | 103 |
| MS.gene057132.t1 | AT5G39660 | 68.852 | 61 | 19 | 0 | 40 | 100 | 135 | 195 | 1.41e-25 | 103 |
| MS.gene057132.t1 | AT5G39660 | 68.852 | 61 | 19 | 0 | 40 | 100 | 135 | 195 | 1.41e-25 | 103 |
| MS.gene057132.t1 | AT5G39660 | 68.852 | 61 | 19 | 0 | 40 | 100 | 135 | 195 | 1.41e-25 | 103 |
| MS.gene057132.t1 | AT3G47500 | 68.333 | 60 | 19 | 0 | 41 | 100 | 108 | 167 | 1.87e-25 | 103 |
| MS.gene057132.t1 | AT4G21040 | 67.188 | 64 | 19 | 1 | 45 | 108 | 27 | 88 | 2.14e-25 | 100 |
| MS.gene057132.t1 | AT2G34140 | 62.903 | 62 | 23 | 0 | 35 | 96 | 50 | 111 | 2.15e-25 | 98.2 |
| MS.gene057132.t1 | AT1G26790 | 67.742 | 62 | 20 | 0 | 40 | 101 | 108 | 169 | 2.82e-25 | 102 |
| MS.gene057132.t1 | AT1G29160 | 55.844 | 77 | 32 | 1 | 20 | 96 | 41 | 115 | 3.70e-25 | 97.8 |
| MS.gene057132.t1 | AT5G62430 | 62.903 | 62 | 23 | 0 | 41 | 102 | 52 | 113 | 8.51e-25 | 99.8 |
| MS.gene057132.t1 | AT4G21080 | 49.425 | 87 | 32 | 2 | 45 | 121 | 27 | 111 | 6.49e-24 | 96.3 |
| MS.gene057132.t1 | AT4G21030 | 49.333 | 75 | 32 | 1 | 45 | 119 | 23 | 91 | 9.64e-15 | 70.5 |
Find 45 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGTCCTTGATGGATCTT+AGG | 0.169048 | 3.1:-73791680 | None:intergenic |
| TGTTCAAACTCACCACTATT+TGG | 0.210892 | 3.1:-73792097 | None:intergenic |
| AAGGTGATTCTACTGGTTAT+TGG | 0.303787 | 3.1:+73792137 | MS.gene057132:CDS |
| GGTTAAGATCTTGTCCTTGA+TGG | 0.347085 | 3.1:-73791688 | None:intergenic |
| GCAAAACTTGTAGAAGGTAT+TGG | 0.349440 | 3.1:+73791471 | MS.gene057132:CDS |
| TATTGGATTGGTTAAACAAA+TGG | 0.368626 | 3.1:+73791292 | MS.gene057132:CDS |
| CTTGTCCTTGATGGATCTTA+GGG | 0.390118 | 3.1:-73791679 | None:intergenic |
| TGAAAACTGCTTCTTCATCA+AGG | 0.432756 | 3.1:+73791819 | MS.gene057132:CDS |
| AAGCTCAATGAATTTAGATA+TGG | 0.438747 | 3.1:-73791750 | None:intergenic |
| TTGTCTTGATCAGTTGTGTA+AGG | 0.463233 | 3.1:-73791773 | None:intergenic |
| CTCTCTAACATAGAAGGTGT+TGG | 0.476502 | 3.1:-73791338 | None:intergenic |
| AATTTAGGGGAATATTGGAT+TGG | 0.478716 | 3.1:+73791280 | MS.gene057132:intron |
| GATTCTACTGGTTATTGGAA+TGG | 0.482077 | 3.1:+73792142 | MS.gene057132:CDS |
| GAAAACTGCTTCTTCATCAA+GGG | 0.488666 | 3.1:+73791820 | MS.gene057132:CDS |
| CAGCAACAAATTCCAAATAG+TGG | 0.488831 | 3.1:+73792085 | MS.gene057132:CDS |
| TAATTATCCTCAGTTGTTTG+TGG | 0.490761 | 3.1:-73791722 | None:intergenic |
| TTGTTTGTGGTGGATAAGCT+AGG | 0.500159 | 3.1:-73791709 | None:intergenic |
| TTTCTTGAACCACCACCTAC+AGG | 0.506879 | 3.1:-73791521 | None:intergenic |
| AGAAATGTTCCTGTAGGTGG+TGG | 0.516507 | 3.1:+73791512 | MS.gene057132:CDS |
| TCTTTAAGAAATGTTCCTGT+AGG | 0.524165 | 3.1:+73791506 | MS.gene057132:CDS |
| GAATGTTCGGTGGAGGATCA+TGG | 0.528349 | 3.1:+73792164 | MS.gene057132:CDS |
| TTATCCTCAGTTGTTTGTGG+TGG | 0.529976 | 3.1:-73791719 | None:intergenic |
| TTAAGAAATGTTCCTGTAGG+TGG | 0.533560 | 3.1:+73791509 | MS.gene057132:CDS |
| AGACAAAACTACAAGTGCTA+TGG | 0.533697 | 3.1:+73791790 | MS.gene057132:CDS |
| AGAACTCAAGGTGATTCTAC+TGG | 0.537114 | 3.1:+73792130 | MS.gene057132:CDS |
| CATCAGCAAAATAGAACTCA+AGG | 0.544205 | 3.1:+73792118 | MS.gene057132:CDS |
| ATCTATGGACACAGCTCAGT+GGG | 0.545119 | 3.1:+73790842 | None:intergenic |
| GGTTATTGGAATGGAATGTT+CGG | 0.551153 | 3.1:+73792151 | MS.gene057132:CDS |
| GGATTGGTTAAACAAATGGA+TGG | 0.552908 | 3.1:+73791296 | MS.gene057132:CDS |
| TGGAATGGAATGTTCGGTGG+AGG | 0.558324 | 3.1:+73792157 | MS.gene057132:CDS |
| ATCAAGCTTTAAACTGTCCA+AGG | 0.561852 | 3.1:+73791381 | MS.gene057132:CDS |
| AAAACTGCTTCTTCATCAAG+GGG | 0.565168 | 3.1:+73791821 | MS.gene057132:CDS |
| CAAAACCCTAAGATCCATCA+AGG | 0.571674 | 3.1:+73791674 | MS.gene057132:CDS |
| TATTGGAATGGAATGTTCGG+TGG | 0.576421 | 3.1:+73792154 | MS.gene057132:CDS |
| TGTAGAAGGTATTGGACTGA+AGG | 0.583395 | 3.1:+73791479 | MS.gene057132:CDS |
| AAAAGTACCTTGGTTGTGAG+AGG | 0.583488 | 3.1:-73791448 | None:intergenic |
| GGTTGTGATTGTGAGATTGA+AGG | 0.587222 | 3.1:-73791572 | None:intergenic |
| AGAAGGTATTGGACTGAAGG+TGG | 0.592159 | 3.1:+73791482 | MS.gene057132:CDS |
| GGACACAGCTCAGTGGGCAC+AGG | 0.600044 | 3.1:+73790848 | MS.gene057132:CDS |
| GATTGAAGGTGATGATGATG+AGG | 0.631503 | 3.1:-73791558 | None:intergenic |
| ACTATAGCCTCTCACAACCA+AGG | 0.671979 | 3.1:+73791441 | MS.gene057132:CDS |
| GTGTTAGTTGAATTGCACCT+TGG | 0.675503 | 3.1:-73791398 | None:intergenic |
| AATCTATGGACACAGCTCAG+TGG | 0.676107 | 3.1:+73790841 | None:intergenic |
| TTATCCACCACAAACAACTG+AGG | 0.701982 | 3.1:+73791715 | MS.gene057132:CDS |
| CTATGTTAGAGAGAAAAGCA+AGG | 0.712069 | 3.1:+73791348 | MS.gene057132:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATATAAGAAATAATAA+AGG | - | chr3.1:73791239-73791258 | None:intergenic | 10.0% |
| !!! | ATTATTTTTGAAAAATTTAG+GGG | + | chr3.1:73791267-73791286 | MS.gene057132:intron | 10.0% |
| !! | GAAGAAAAAAATAAATGAAA+AGG | - | chr3.1:73791098-73791117 | None:intergenic | 15.0% |
| !! | TGATACATAAAACTTTATTA+TGG | - | chr3.1:73790958-73790977 | None:intergenic | 15.0% |
| !!! | ATATTTTTTGTTATTGATGA+TGG | - | chr3.1:73791599-73791618 | None:intergenic | 15.0% |
| !!! | AAAACTGAAATTTTTAGTTG+AGG | - | chr3.1:73791049-73791068 | None:intergenic | 20.0% |
| !!! | AAATTCATCAACTTTTTCTT+GGG | - | chr3.1:73791154-73791173 | None:intergenic | 20.0% |
| !!! | TTTTCTTCATGATTATAAGA+AGG | - | chr3.1:73790903-73790922 | None:intergenic | 20.0% |
| ! | AAGCTCAATGAATTTAGATA+TGG | - | chr3.1:73791753-73791772 | None:intergenic | 25.0% |
| ! | AATAAAGGAAACAAACAAGA+AGG | - | chr3.1:73791224-73791243 | None:intergenic | 25.0% |
| ! | TGAAAAATTTAGGGGAATAT+TGG | + | chr3.1:73791275-73791294 | MS.gene057132:intron | 25.0% |
| !!! | CAAATTCATCAACTTTTTCT+TGG | - | chr3.1:73791155-73791174 | None:intergenic | 25.0% |
| !!! | GTTGATTATTGTTAGTTCTA+AGG | + | chr3.1:73790986-73791005 | MS.gene057132:intron | 25.0% |
| !!! | TATTGGATTGGTTAAACAAA+TGG | + | chr3.1:73791292-73791311 | MS.gene057132:CDS | 25.0% |
| !!! | TTTAAAGCTTGATCTTTTTG+TGG | - | chr3.1:73791374-73791393 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTATTGATGATGG+AGG | - | chr3.1:73791596-73791615 | None:intergenic | 25.0% |
| AATTTAGGGGAATATTGGAT+TGG | + | chr3.1:73791280-73791299 | MS.gene057132:intron | 30.0% | |
| AGTGCAATGTATAATTCAAG+TGG | + | chr3.1:73791881-73791900 | MS.gene057132:intron | 30.0% | |
| ATTAATAATCAAGAGGGTTC+TGG | + | chr3.1:73791983-73792002 | MS.gene057132:intron | 30.0% | |
| CAAGGGATTAATAATCAAGA+GGG | + | chr3.1:73791977-73791996 | MS.gene057132:intron | 30.0% | |
| GAAGGAAAGAAAACAGAAAA+AGG | - | chr3.1:73790885-73790904 | None:intergenic | 30.0% | |
| TAATTATCCTCAGTTGTTTG+TGG | - | chr3.1:73791725-73791744 | None:intergenic | 30.0% | |
| ! | ACTTTTGCAAAACTTGTAGA+AGG | + | chr3.1:73791465-73791484 | MS.gene057132:CDS | 30.0% |
| ! | CTTTGCAAGATTTTAAGCTT+GGG | + | chr3.1:73791909-73791928 | MS.gene057132:intron | 30.0% |
| ! | CTTTTTCTTGGGAAAAAGAA+AGG | - | chr3.1:73791143-73791162 | None:intergenic | 30.0% |
| ! | TCTTTAAGAAATGTTCCTGT+AGG | + | chr3.1:73791506-73791525 | MS.gene057132:CDS | 30.0% |
| ! | TTTAAGCTTGGGGTTAATTT+TGG | + | chr3.1:73791920-73791939 | MS.gene057132:intron | 30.0% |
| ! | TTTGCAAGATTTTAAGCTTG+GGG | + | chr3.1:73791910-73791929 | MS.gene057132:intron | 30.0% |
| !!! | GAAATTTTTAGTTGAGGATC+AGG | - | chr3.1:73791043-73791062 | None:intergenic | 30.0% |
| !!! | GGGTTAATTTTGGTTTAGAA+GGG | + | chr3.1:73791930-73791949 | MS.gene057132:intron | 30.0% |
| AAAACTGCTTCTTCATCAAG+GGG | + | chr3.1:73791821-73791840 | MS.gene057132:CDS | 35.0% | |
| AACTGATGATCATCTACAAC+AGG | - | chr3.1:73792052-73792071 | None:intergenic | 35.0% | |
| AGACAAAACTACAAGTGCTA+TGG | + | chr3.1:73791790-73791809 | MS.gene057132:CDS | 35.0% | |
| AGGATCAGGAAAAGTAGTAA+AGG | - | chr3.1:73791029-73791048 | None:intergenic | 35.0% | |
| CAGCAACAAATTCCAAATAG+TGG | + | chr3.1:73792085-73792104 | MS.gene057132:CDS | 35.0% | |
| CATCAGCAAAATAGAACTCA+AGG | + | chr3.1:73792118-73792137 | MS.gene057132:CDS | 35.0% | |
| CTATGTTAGAGAGAAAAGCA+AGG | + | chr3.1:73791348-73791367 | MS.gene057132:CDS | 35.0% | |
| GAAAACTGCTTCTTCATCAA+GGG | + | chr3.1:73791820-73791839 | MS.gene057132:CDS | 35.0% | |
| GCAAGGGATTAATAATCAAG+AGG | + | chr3.1:73791976-73791995 | MS.gene057132:intron | 35.0% | |
| GGTTATTGGAATGGAATGTT+CGG | + | chr3.1:73792151-73792170 | MS.gene057132:CDS | 35.0% | |
| TGAAAACTGCTTCTTCATCA+AGG | + | chr3.1:73791819-73791838 | MS.gene057132:CDS | 35.0% | |
| TGTTCAAACTCACCACTATT+TGG | - | chr3.1:73792100-73792119 | None:intergenic | 35.0% | |
| TTAAGAAATGTTCCTGTAGG+TGG | + | chr3.1:73791509-73791528 | MS.gene057132:CDS | 35.0% | |
| TTGTCTTGATCAGTTGTGTA+AGG | - | chr3.1:73791776-73791795 | None:intergenic | 35.0% | |
| ! | AAGGTGATTCTACTGGTTAT+TGG | + | chr3.1:73792137-73792156 | MS.gene057132:CDS | 35.0% |
| ! | GATTCTACTGGTTATTGGAA+TGG | + | chr3.1:73792142-73792161 | MS.gene057132:CDS | 35.0% |
| ! | GCAAAACTTGTAGAAGGTAT+TGG | + | chr3.1:73791471-73791490 | MS.gene057132:CDS | 35.0% |
| ! | GCTTTGCAAGATTTTAAGCT+TGG | + | chr3.1:73791908-73791927 | MS.gene057132:intron | 35.0% |
| ! | GCTTTTCTCTCTAACATAGA+AGG | - | chr3.1:73791347-73791366 | None:intergenic | 35.0% |
| !! | ATCAAGCTTTAAACTGTCCA+AGG | + | chr3.1:73791381-73791400 | MS.gene057132:CDS | 35.0% |
| !! | GGATTGGTTAAACAAATGGA+TGG | + | chr3.1:73791296-73791315 | MS.gene057132:CDS | 35.0% |
| !!! | CAAGTTTTGCAAAAGTACCT+TGG | - | chr3.1:73791461-73791480 | None:intergenic | 35.0% |
| !!! | GGGGTTAATTTTGGTTTAGA+AGG | + | chr3.1:73791929-73791948 | MS.gene057132:intron | 35.0% |
| AGAACTCAAGGTGATTCTAC+TGG | + | chr3.1:73792130-73792149 | MS.gene057132:CDS | 40.0% | |
| CAAAACCCTAAGATCCATCA+AGG | + | chr3.1:73791674-73791693 | MS.gene057132:CDS | 40.0% | |
| CTAGACTCAGACAAAGTCAT+AGG | - | chr3.1:73791863-73791882 | None:intergenic | 40.0% | |
| GAAGGGTTTGAGAATGGTTA+TGG | + | chr3.1:73791947-73791966 | MS.gene057132:intron | 40.0% | |
| GGTTAAGATCTTGTCCTTGA+TGG | - | chr3.1:73791691-73791710 | None:intergenic | 40.0% | |
| GGTTGTGATTGTGAGATTGA+AGG | - | chr3.1:73791575-73791594 | None:intergenic | 40.0% | |
| GGTTTAGAAGGGTTTGAGAA+TGG | + | chr3.1:73791941-73791960 | MS.gene057132:intron | 40.0% | |
| GTGTTAGTTGAATTGCACCT+TGG | - | chr3.1:73791401-73791420 | None:intergenic | 40.0% | |
| TATTGGAATGGAATGTTCGG+TGG | + | chr3.1:73792154-73792173 | MS.gene057132:CDS | 40.0% | |
| TCTTGGGAAAAAGAAAGGTG+TGG | - | chr3.1:73791138-73791157 | None:intergenic | 40.0% | |
| TTATCCACCACAAACAACTG+AGG | + | chr3.1:73791715-73791734 | MS.gene057132:CDS | 40.0% | |
| TTATCCTCAGTTGTTTGTGG+TGG | - | chr3.1:73791722-73791741 | None:intergenic | 40.0% | |
| ! | AATAATCAAGAGGGTTCTGG+TGG | + | chr3.1:73791986-73792005 | MS.gene057132:intron | 40.0% |
| ! | CTCTCTAACATAGAAGGTGT+TGG | - | chr3.1:73791341-73791360 | None:intergenic | 40.0% |
| ! | CTTGTCCTTGATGGATCTTA+GGG | - | chr3.1:73791682-73791701 | None:intergenic | 40.0% |
| ! | GATTGAAGGTGATGATGATG+AGG | - | chr3.1:73791561-73791580 | None:intergenic | 40.0% |
| ! | TCTTGTCCTTGATGGATCTT+AGG | - | chr3.1:73791683-73791702 | None:intergenic | 40.0% |
| ! | TTTTGTGCTGTAGCAAGATC+AGG | - | chr3.1:73791632-73791651 | None:intergenic | 40.0% |
| !! | AAAAGTACCTTGGTTGTGAG+AGG | - | chr3.1:73791451-73791470 | None:intergenic | 40.0% |
| !! | TGTAGAAGGTATTGGACTGA+AGG | + | chr3.1:73791479-73791498 | MS.gene057132:CDS | 40.0% |
| !! | TTGTTTGTGGTGGATAAGCT+AGG | - | chr3.1:73791712-73791731 | None:intergenic | 40.0% |
| !!! | GGTTTTGAGAAGCAGATTGA+GGG | - | chr3.1:73791661-73791680 | None:intergenic | 40.0% |
| ACTATAGCCTCTCACAACCA+AGG | + | chr3.1:73791441-73791460 | MS.gene057132:CDS | 45.0% | |
| AGAAATGTTCCTGTAGGTGG+TGG | + | chr3.1:73791512-73791531 | MS.gene057132:CDS | 45.0% | |
| GGGTTTGAGAATGGTTATGG+TGG | + | chr3.1:73791950-73791969 | MS.gene057132:intron | 45.0% | |
| TTTCTTGAACCACCACCTAC+AGG | - | chr3.1:73791524-73791543 | None:intergenic | 45.0% | |
| ! | AATGGTTATGGTGGCTTGCA+AGG | + | chr3.1:73791959-73791978 | MS.gene057132:intron | 45.0% |
| ! | ATGGTTATGGTGGCTTGCAA+GGG | + | chr3.1:73791960-73791979 | MS.gene057132:intron | 45.0% |
| !! | AGAAGGTATTGGACTGAAGG+TGG | + | chr3.1:73791482-73791501 | MS.gene057132:CDS | 45.0% |
| !!! | GGGTTTTGAGAAGCAGATTG+AGG | - | chr3.1:73791662-73791681 | None:intergenic | 45.0% |
| !!! | TATTATTTTTGAAAAATTTA+GGG | + | chr3.1:73791266-73791285 | MS.gene057132:intron | 5.0% |
| !!! | TTATTATTTTTGAAAAATTT+AGG | + | chr3.1:73791265-73791284 | MS.gene057132:intron | 5.0% |
| ! | AATCAAGAGGGTTCTGGTGG+TGG | + | chr3.1:73791989-73792008 | MS.gene057132:intron | 50.0% |
| ! | GAATGTTCGGTGGAGGATCA+TGG | + | chr3.1:73792164-73792183 | MS.gene057132:CDS | 50.0% |
| ! | TGGAATGGAATGTTCGGTGG+AGG | + | chr3.1:73792157-73792176 | MS.gene057132:CDS | 50.0% |
| !! | CAAGAGGGTTCTGGTGGTGG+TGG | + | chr3.1:73791992-73792011 | MS.gene057132:intron | 60.0% |
| GGACACAGCTCAGTGGGCAC+AGG | + | chr3.1:73790848-73790867 | MS.gene057132:CDS | 65.0% | |
| !! | GAGGGTTCTGGTGGTGGTGG+TGG | + | chr3.1:73791995-73792014 | MS.gene057132:intron | 65.0% |
| !! | GGTTCTGGTGGTGGTGGTGG+TGG | + | chr3.1:73791998-73792017 | MS.gene057132:intron | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGCA+AGG | + | chr3.1:73792017-73792036 | MS.gene057132:intron | 65.0% |
| !! | TCTGGTGGTGGTGGTGGTGG+TGG | + | chr3.1:73792001-73792020 | MS.gene057132:intron | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr3.1:73792004-73792023 | MS.gene057132:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73790846 | 73792189 | 73790846 | ID=MS.gene057132 |
| chr3.1 | mRNA | 73790846 | 73792189 | 73790846 | ID=MS.gene057132.t1;Parent=MS.gene057132 |
| chr3.1 | exon | 73790846 | 73790869 | 73790846 | ID=MS.gene057132.t1.exon1;Parent=MS.gene057132.t1 |
| chr3.1 | CDS | 73790846 | 73790869 | 73790846 | ID=cds.MS.gene057132.t1;Parent=MS.gene057132.t1 |
| chr3.1 | exon | 73791287 | 73791842 | 73791287 | ID=MS.gene057132.t1.exon2;Parent=MS.gene057132.t1 |
| chr3.1 | CDS | 73791287 | 73791842 | 73791287 | ID=cds.MS.gene057132.t1;Parent=MS.gene057132.t1 |
| chr3.1 | exon | 73792059 | 73792189 | 73792059 | ID=MS.gene057132.t1.exon3;Parent=MS.gene057132.t1 |
| chr3.1 | CDS | 73792059 | 73792189 | 73792059 | ID=cds.MS.gene057132.t1;Parent=MS.gene057132.t1 |
| Gene Sequence |
| Protein sequence |
