AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48476

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48476.t1 MTR_3g101290 89.756 205 3 4 23 227 29 215 1.13e-128 363
MS.gene48476.t1 MTR_4g094982 46.559 247 81 6 27 227 1 242 9.55e-59 187
MS.gene48476.t1 MTR_5g016510 76.190 105 25 0 27 131 1 105 5.24e-57 184
MS.gene48476.t1 MTR_4g019370 58.904 146 52 1 29 174 36 173 4.32e-54 177
MS.gene48476.t1 MTR_6g015455 72.381 105 29 0 27 131 1 105 5.25e-50 175
MS.gene48476.t1 MTR_5g082910 66.957 115 37 1 14 128 3 116 1.60e-49 164
MS.gene48476.t1 MTR_7g037260 50.442 113 56 0 27 139 141 253 6.79e-36 130
MS.gene48476.t1 MTR_3g089045 57.426 101 43 0 31 131 16 116 1.02e-35 128
MS.gene48476.t1 MTR_3g110028 40.845 142 84 0 30 171 84 225 6.75e-35 131
MS.gene48476.t1 MTR_4g082040 55.446 101 45 0 31 131 105 205 6.79e-35 129
MS.gene48476.t1 MTR_3g077650 48.696 115 59 0 24 138 174 288 8.42e-35 129
MS.gene48476.t1 MTR_7g451170 39.333 150 83 1 28 177 188 329 1.01e-34 128
MS.gene48476.t1 MTR_5g041570 54.455 101 46 0 31 131 134 234 1.16e-34 128
MS.gene48476.t1 MTR_7g086960 55.446 101 45 0 31 131 89 189 1.37e-34 127
MS.gene48476.t1 MTR_6g074860 54.000 100 46 0 31 130 4 103 2.95e-34 123
MS.gene48476.t1 MTR_5g042030 56.863 102 43 1 31 131 9 110 6.22e-34 123
MS.gene48476.t1 MTR_5g070020 50.980 102 50 0 30 131 121 222 1.16e-33 124
MS.gene48476.t1 MTR_4g105660 50.980 102 50 0 30 131 179 280 1.31e-33 125
MS.gene48476.t1 MTR_5g049190 40.580 138 79 1 22 159 10 144 2.30e-33 120
MS.gene48476.t1 MTR_1g026870 48.039 102 53 0 30 131 84 185 6.30e-33 126
MS.gene48476.t1 MTR_3g463400 47.748 111 58 0 21 131 123 233 2.70e-32 122
MS.gene48476.t1 MTR_6g027370 49.020 102 52 0 30 131 98 199 4.02e-32 120
MS.gene48476.t1 MTR_3g461490 52.941 102 47 1 31 131 14 115 1.49e-31 118
MS.gene48476.t1 MTR_7g037130 50.495 101 50 0 27 127 141 241 1.51e-31 119
MS.gene48476.t1 MTR_7g061330 49.020 102 52 0 30 131 112 213 1.61e-31 121
MS.gene48476.t1 MTR_7g461410 49.020 102 52 0 30 131 112 213 1.61e-31 121
MS.gene48476.t1 MTR_7g061330 49.020 102 52 0 30 131 76 177 2.07e-31 120
MS.gene48476.t1 MTR_3g052450 50.943 106 51 1 31 135 42 147 2.15e-31 120
MS.gene48476.t1 MTR_4g088015 49.505 101 51 0 30 130 220 320 2.20e-31 119
MS.gene48476.t1 MTR_0008s0390 52.427 103 48 1 31 132 15 117 3.83e-31 115
MS.gene48476.t1 MTR_1g043080 50.980 102 49 1 31 131 14 115 7.42e-31 114
MS.gene48476.t1 MTR_1g045610 50.485 103 50 1 31 132 23 125 1.21e-30 114
MS.gene48476.t1 MTR_8g031360 45.763 118 62 2 21 136 5 122 1.91e-30 114
MS.gene48476.t1 MTR_3g052430 50.000 106 52 1 31 135 43 148 2.01e-30 118
MS.gene48476.t1 MTR_0008s0470 51.456 103 49 1 31 132 15 117 4.22e-30 113
MS.gene48476.t1 MTR_7g011170 52.941 102 47 1 31 131 14 115 4.85e-30 114
MS.gene48476.t1 MTR_1g073170 49.515 103 49 2 31 131 22 123 5.16e-30 112
MS.gene48476.t1 MTR_6g027340 44.554 101 56 0 31 131 16 116 6.74e-30 110
MS.gene48476.t1 MTR_0251s0050 50.485 103 50 1 31 132 15 117 1.84e-29 111
MS.gene48476.t1 MTR_7g450950 45.918 98 53 0 30 127 156 253 3.76e-29 112
MS.gene48476.t1 MTR_1g076150 47.664 107 55 1 26 131 9 115 5.01e-29 110
MS.gene48476.t1 MTR_6g027360 44.554 101 56 0 31 131 78 178 8.82e-29 110
MS.gene48476.t1 MTR_7g076740 49.541 109 51 3 31 136 14 121 1.09e-28 110
MS.gene48476.t1 MTR_4g091490 48.039 102 52 1 31 131 15 116 1.19e-28 111
MS.gene48476.t1 MTR_4g478180 49.020 102 51 1 31 131 15 116 1.26e-28 110
MS.gene48476.t1 MTR_2g089420 50.980 102 49 1 31 131 13 114 3.01e-28 111
MS.gene48476.t1 MTR_4g121460 50.000 110 54 1 26 134 9 118 3.11e-28 109
MS.gene48476.t1 MTR_2g011660 48.039 102 52 1 31 131 15 116 3.41e-28 109
MS.gene48476.t1 MTR_7g035350 48.077 104 54 0 24 127 218 321 3.72e-28 110
MS.gene48476.t1 MTR_1g062940 45.872 109 56 2 31 137 8 115 3.91e-28 106
MS.gene48476.t1 MTR_1g100667 47.414 116 56 2 21 133 5 118 4.02e-28 107
MS.gene48476.t1 MTR_7g115650 47.573 103 53 1 31 132 14 116 4.04e-28 106
MS.gene48476.t1 MTR_4g082290 51.961 102 48 1 31 131 14 115 4.19e-28 110
MS.gene48476.t1 MTR_8g006470 50.000 104 50 2 31 132 12 115 4.38e-28 108
MS.gene48476.t1 MTR_5g007370 49.020 102 51 1 31 131 14 115 4.75e-28 108
MS.gene48476.t1 MTR_3g011610 41.727 139 67 3 31 157 39 175 4.82e-28 111
MS.gene48476.t1 MTR_4g029540 51.961 102 47 2 31 130 12 113 5.42e-28 108
MS.gene48476.t1 MTR_7g096930 47.664 107 55 1 26 131 9 115 6.21e-28 107
MS.gene48476.t1 MTR_1g043050 49.020 102 51 1 31 131 14 115 7.05e-28 107
MS.gene48476.t1 MTR_5g088610 41.096 146 74 5 27 170 7 142 7.69e-28 108
MS.gene48476.t1 MTR_3g028740 52.174 115 52 2 18 131 13 125 8.57e-28 108
MS.gene48476.t1 MTR_0063s0090 48.515 101 49 2 31 129 14 113 1.05e-27 105
MS.gene48476.t1 MTR_2g034790 48.571 105 53 1 31 134 14 118 1.29e-27 107
MS.gene48476.t1 MTR_6g012690 48.148 108 55 1 25 131 8 115 1.35e-27 108
MS.gene48476.t1 MTR_3g074520 47.059 102 53 1 31 131 14 115 1.38e-27 108
MS.gene48476.t1 MTR_1g100653 47.573 103 53 1 31 132 14 116 1.79e-27 106
MS.gene48476.t1 MTR_5g014990 47.706 109 55 2 25 131 8 116 2.03e-27 107
MS.gene48476.t1 MTR_1g017140 48.624 109 54 2 25 131 8 116 2.15e-27 107
MS.gene48476.t1 MTR_1g057980 46.875 96 51 0 31 126 80 175 2.41e-27 106
MS.gene48476.t1 MTR_8g042410 46.226 106 56 1 31 135 39 144 2.66e-27 109
MS.gene48476.t1 MTR_2g089450 47.525 101 52 1 31 130 14 114 2.71e-27 105
MS.gene48476.t1 MTR_7g102110 49.515 103 50 2 31 131 14 116 3.02e-27 105
MS.gene48476.t1 MTR_5g078140 32.843 204 126 4 31 223 14 217 3.48e-27 106
MS.gene48476.t1 MTR_2g089620 48.039 102 52 1 31 131 14 115 3.72e-27 106
MS.gene48476.t1 MTR_2g097910 51.961 102 48 1 31 131 22 123 4.63e-27 106
MS.gene48476.t1 MTR_4g057635 49.515 103 50 2 31 131 14 116 4.72e-27 106
MS.gene48476.t1 MTR_5g029840 46.078 102 54 1 31 131 14 115 5.53e-27 106
MS.gene48476.t1 MTR_8g027345 47.573 103 53 1 31 132 14 116 6.10e-27 105
MS.gene48476.t1 MTR_1g017000 46.729 107 55 2 31 135 14 120 6.30e-27 104
MS.gene48476.t1 MTR_2g064160 46.729 107 56 1 31 136 13 119 6.47e-27 105
MS.gene48476.t1 MTR_8g095390 50.000 102 50 1 31 131 14 115 6.83e-27 105
MS.gene48476.t1 MTR_0140s0030 48.598 107 54 1 26 131 10 116 6.87e-27 105
MS.gene48476.t1 MTR_0489s0020 48.598 107 54 1 26 131 10 116 6.87e-27 105
MS.gene48476.t1 MTR_5g088080 45.455 110 58 2 28 135 11 120 8.94e-27 104
MS.gene48476.t1 MTR_5g088150 45.455 110 58 2 28 135 11 120 8.94e-27 104
MS.gene48476.t1 MTR_5g488210 45.455 110 58 2 28 135 11 120 8.94e-27 104
MS.gene48476.t1 MTR_5g088640 45.455 110 58 2 28 135 11 120 9.71e-27 104
MS.gene48476.t1 MTR_5g062790 47.273 110 53 3 27 131 7 116 9.72e-27 105
MS.gene48476.t1 MTR_1g085040 50.467 107 52 1 31 136 14 120 1.01e-26 106
MS.gene48476.t1 MTR_4g082230 50.000 102 50 1 31 131 14 115 1.11e-26 106
MS.gene48476.t1 MTR_1g110460 41.228 114 64 2 20 132 19 130 1.19e-26 104
MS.gene48476.t1 MTR_7g035075 43.590 117 59 2 15 130 6 116 1.22e-26 102
MS.gene48476.t1 MTR_4g063100 44.660 103 54 2 31 131 9 110 1.26e-26 103
MS.gene48476.t1 MTR_5g488170 45.455 110 58 2 28 135 11 120 1.40e-26 103
MS.gene48476.t1 MTR_2g088170 50.000 106 52 1 31 135 31 136 1.56e-26 106
MS.gene48476.t1 MTR_0008s0280 42.202 109 62 1 31 138 14 122 1.59e-26 102
MS.gene48476.t1 MTR_7g010210 47.059 102 53 1 31 131 14 115 1.81e-26 103
MS.gene48476.t1 MTR_4g065017 51.961 102 48 1 31 131 19 120 1.87e-26 104
MS.gene48476.t1 MTR_7g010210 47.059 102 53 1 31 131 14 115 1.88e-26 104
MS.gene48476.t1 MTR_4g485530 45.536 112 60 1 21 131 4 115 1.88e-26 101
MS.gene48476.t1 MTR_7g117730 47.059 102 53 1 31 131 14 115 2.02e-26 103
MS.gene48476.t1 MTR_3g103570 45.872 109 57 2 25 131 8 116 2.15e-26 104
MS.gene48476.t1 MTR_6g090405 48.598 107 53 2 31 135 14 120 2.18e-26 102
MS.gene48476.t1 MTR_1g086530 42.742 124 70 1 10 132 14 137 2.50e-26 103
MS.gene48476.t1 MTR_1g112760 48.598 107 54 1 31 136 15 121 2.50e-26 102
MS.gene48476.t1 MTR_5g010650 47.475 99 50 2 28 125 107 204 2.56e-26 106
MS.gene48476.t1 MTR_5g079670 49.020 102 51 1 31 131 13 114 2.95e-26 101
MS.gene48476.t1 MTR_3g065440 45.794 107 57 1 31 136 14 120 3.03e-26 103
MS.gene48476.t1 MTR_4g100720 45.631 103 55 1 31 132 15 117 3.66e-26 100
MS.gene48476.t1 MTR_2g095520 50.000 104 50 2 25 126 8 111 5.30e-26 103
MS.gene48476.t1 MTR_8g017540 47.788 113 56 2 23 134 54 164 6.98e-26 104
MS.gene48476.t1 MTR_3g077110 48.598 107 54 1 31 136 14 120 7.00e-26 103
MS.gene48476.t1 MTR_4g097570 48.077 104 51 2 25 125 8 111 7.24e-26 102
MS.gene48476.t1 MTR_8g017440 46.903 113 59 1 25 136 8 120 8.59e-26 103
MS.gene48476.t1 MTR_4g102380 44.444 108 59 1 25 131 8 115 9.53e-26 101
MS.gene48476.t1 MTR_1g021230 47.059 102 53 1 31 131 59 160 1.14e-25 103
MS.gene48476.t1 MTR_1g085640 43.382 136 74 2 31 165 14 147 1.42e-25 103
MS.gene48476.t1 MTR_6g009430 43.519 108 60 1 25 131 8 115 1.56e-25 102
MS.gene48476.t1 MTR_3g039990 47.059 102 53 1 31 131 15 116 1.97e-25 101
MS.gene48476.t1 MTR_4g105130 50.000 102 50 1 31 131 14 115 3.10e-25 102
MS.gene48476.t1 MTR_4g097570 47.573 103 52 2 25 125 8 110 3.95e-25 100
MS.gene48476.t1 MTR_4g125520 46.602 103 54 1 31 132 14 116 4.06e-25 100
MS.gene48476.t1 MTR_6g012180 48.454 97 49 1 31 126 14 110 5.75e-25 100
MS.gene48476.t1 MTR_6g055910 46.154 104 51 2 31 131 16 117 6.51e-25 99.8
MS.gene48476.t1 MTR_2g096380 42.308 104 57 2 31 132 8 110 6.91e-25 98.6
MS.gene48476.t1 MTR_3g097450 48.039 102 52 1 31 131 14 115 7.25e-25 99.8
MS.gene48476.t1 MTR_7g087130 46.078 102 54 1 31 131 14 115 9.76e-25 100
MS.gene48476.t1 MTR_8g020490 46.078 102 54 1 31 131 10 111 1.06e-24 98.6
MS.gene48476.t1 MTR_3g045430 42.636 129 71 3 34 160 18 145 1.44e-24 99.0
MS.gene48476.t1 MTR_8g098860 47.273 110 55 2 23 131 8 115 1.47e-24 99.4
MS.gene48476.t1 MTR_6g006030 44.554 101 55 1 31 130 16 116 1.47e-24 97.1
MS.gene48476.t1 MTR_2g099740 48.148 108 55 1 25 131 8 115 1.97e-24 100
MS.gene48476.t1 MTR_1g086510 46.602 103 54 1 31 132 23 125 2.19e-24 97.8
MS.gene48476.t1 MTR_7g111290 51.042 96 46 1 31 125 14 109 3.23e-24 99.4
MS.gene48476.t1 MTR_5g010020 49.524 105 50 2 23 126 8 110 3.78e-24 98.6
MS.gene48476.t1 MTR_7g110830 48.039 102 52 1 31 131 14 115 4.83e-24 99.0
MS.gene48476.t1 MTR_4g073420 47.059 102 53 1 31 131 14 115 4.90e-24 97.4
MS.gene48476.t1 MTR_8g017500 47.222 108 56 1 25 131 8 115 8.94e-24 97.8
MS.gene48476.t1 MTR_2g067420 46.392 97 51 1 31 126 16 112 1.07e-23 97.4
MS.gene48476.t1 MTR_4g128670 47.959 98 49 2 31 126 14 111 1.17e-23 97.4
MS.gene48476.t1 MTR_5g079220 43.689 103 57 1 31 132 23 125 1.21e-23 96.3
MS.gene48476.t1 MTR_3g083540 43.137 102 57 1 31 131 43 144 1.41e-23 96.7
MS.gene48476.t1 MTR_8g017340 47.573 103 52 2 31 131 14 116 3.43e-23 97.4
MS.gene48476.t1 MTR_5g078910 42.718 103 58 1 31 132 9 111 4.18e-23 95.1
MS.gene48476.t1 MTR_0001s0360 42.718 103 58 1 31 132 9 111 4.19e-23 94.4
MS.gene48476.t1 MTR_8g017390 46.847 111 55 3 23 131 8 116 5.04e-23 97.1
MS.gene48476.t1 MTR_0247s0040 47.000 100 52 1 31 129 9 108 5.26e-23 92.0
MS.gene48476.t1 MTR_5g078800 42.718 103 58 1 31 132 9 111 5.27e-23 94.4
MS.gene48476.t1 MTR_7g017260 42.857 105 57 1 31 132 27 131 5.72e-23 94.4
MS.gene48476.t1 MTR_2g033170 40.650 123 69 2 14 132 6 128 8.59e-23 94.7
MS.gene48476.t1 MTR_5g079290 40.777 103 60 1 31 132 19 121 9.46e-23 93.6
MS.gene48476.t1 MTR_0193s0090 42.991 107 60 1 31 136 9 115 3.67e-22 90.5
MS.gene48476.t1 MTR_8g017350 46.602 103 53 2 31 131 14 116 4.36e-22 94.7
MS.gene48476.t1 MTR_1g083630 38.136 118 72 1 19 135 2 119 5.24e-22 94.4
MS.gene48476.t1 MTR_5g078930 45.098 102 55 1 31 131 11 112 5.60e-22 90.5
MS.gene48476.t1 MTR_5g079120 41.818 110 63 1 24 132 56 165 9.11e-22 91.7
MS.gene48476.t1 MTR_5g078860 40.777 103 60 1 31 132 9 111 1.11e-21 91.3
MS.gene48476.t1 MTR_0197s0010 42.424 99 56 1 34 131 6 104 1.35e-21 89.7
MS.gene48476.t1 MTR_7g109320 51.456 103 49 1 31 132 14 116 2.60e-21 91.3
MS.gene48476.t1 MTR_8g060940 44.444 99 54 1 31 128 9 107 3.57e-21 89.0
MS.gene48476.t1 MTR_5g078950 41.000 100 58 1 31 129 9 108 8.89e-21 88.2
MS.gene48476.t1 MTR_4g123040 37.500 112 69 1 22 132 17 128 4.83e-20 87.0
MS.gene48476.t1 MTR_4g063100 45.455 77 40 1 57 131 5 81 1.32e-19 84.3
MS.gene48476.t1 MTR_6g055910 49.351 77 37 1 57 131 12 88 1.56e-19 84.7
MS.gene48476.t1 MTR_5g038910 39.394 99 60 0 34 132 29 127 9.09e-19 84.7
MS.gene48476.t1 MTR_5g038910 39.394 99 60 0 34 132 29 127 1.00e-18 84.3
MS.gene48476.t1 MTR_7g111290 59.677 62 25 0 64 125 6 67 3.19e-18 82.4
MS.gene48476.t1 MTR_2g096380 44.928 69 38 0 64 132 23 91 6.71e-18 79.7
MS.gene48476.t1 MTR_4g128190 43.299 97 42 3 31 126 13 97 9.42e-18 79.7
MS.gene48476.t1 MTR_8g468380 37.755 98 61 0 34 131 25 122 2.74e-17 80.5
MS.gene48476.t1 MTR_1g085880 43.158 95 52 2 34 126 17 111 3.70e-16 74.3
MS.gene48476.t1 MTR_5g007300 48.000 75 38 1 31 104 66 140 6.89e-16 72.4
MS.gene48476.t1 MTR_1g085770 43.158 95 52 2 34 126 17 111 1.26e-15 74.7
MS.gene48476.t1 MTR_7g061550 37.234 94 56 1 34 124 10 103 1.24e-14 72.4
MS.gene48476.t1 MTR_1g008970 34.615 104 49 1 28 131 107 191 2.35e-14 70.5
MS.gene48476.t1 MTR_6g080360 31.313 99 67 1 30 128 478 575 2.86e-11 63.2
MS.gene48476.t1 MTR_6g080360 34.043 94 61 1 31 124 530 622 9.37e-11 61.6
MS.gene48476.t1 MTR_6g080360 31.313 99 67 1 30 128 258 355 4.98e-11 62.4
MS.gene48476.t1 MTR_0023s0210 38.667 75 45 1 31 104 9 83 5.58e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48476.t1 AT4G37260 66.906 139 37 2 19 157 2 131 1.37e-58 188
MS.gene48476.t1 AT3G50060 75.221 113 26 1 28 140 3 113 1.55e-57 185
MS.gene48476.t1 AT5G67300 74.783 115 29 0 28 142 3 117 3.97e-57 184
MS.gene48476.t1 AT2G23290 65.441 136 45 1 22 157 4 137 7.02e-56 181
MS.gene48476.t1 AT3G55730 67.961 103 33 0 29 131 54 156 4.47e-48 163
MS.gene48476.t1 AT3G09230 68.269 104 33 0 28 131 52 155 9.60e-48 162
MS.gene48476.t1 AT2G39880 63.107 103 38 0 29 131 48 150 4.24e-44 152
MS.gene48476.t1 AT4G33450 52.212 113 54 0 19 131 7 119 1.53e-36 129
MS.gene48476.t1 AT5G17800 56.436 101 44 0 31 131 93 193 1.21e-35 129
MS.gene48476.t1 AT1G17950 54.455 101 46 0 31 131 5 105 1.67e-35 126
MS.gene48476.t1 AT5G58850 51.961 102 49 0 30 131 104 205 8.32e-35 129
MS.gene48476.t1 AT1G69560 53.465 101 47 0 31 131 107 207 1.53e-34 126
MS.gene48476.t1 AT1G69560 53.465 101 47 0 31 131 123 223 1.82e-34 126
MS.gene48476.t1 AT1G26780 53.465 101 47 0 31 131 98 198 3.11e-34 124
MS.gene48476.t1 AT1G73410 56.436 101 44 0 31 131 6 106 3.58e-34 123
MS.gene48476.t1 AT1G73410 56.436 101 44 0 31 131 6 106 4.21e-34 121
MS.gene48476.t1 AT1G26780 53.465 101 47 0 31 131 98 198 5.00e-34 125
MS.gene48476.t1 AT3G09370 49.524 105 53 0 28 132 127 231 1.32e-33 126
MS.gene48476.t1 AT3G09370 49.524 105 53 0 28 132 132 236 1.37e-33 126
MS.gene48476.t1 AT3G09370 49.524 105 53 0 28 132 140 244 1.73e-33 126
MS.gene48476.t1 AT4G18770 42.636 129 74 0 30 158 216 344 2.25e-33 125
MS.gene48476.t1 AT5G11050 50.000 102 51 0 30 131 104 205 3.12e-33 124
MS.gene48476.t1 AT3G27785 50.980 102 50 0 30 131 188 289 3.97e-33 124
MS.gene48476.t1 AT5G11510 43.243 111 63 0 30 140 80 190 7.23e-33 125
MS.gene48476.t1 AT5G11510 43.243 111 63 0 30 140 80 190 7.23e-33 125
MS.gene48476.t1 AT5G11510 43.243 111 63 0 30 140 80 190 7.23e-33 125
MS.gene48476.t1 AT4G32730 44.262 122 65 1 30 148 86 207 8.25e-33 125
MS.gene48476.t1 AT4G32730 44.262 122 65 1 30 148 86 207 8.25e-33 125
MS.gene48476.t1 AT4G32730 44.262 122 65 1 30 148 86 207 8.25e-33 125
MS.gene48476.t1 AT4G32730 44.262 122 65 1 30 148 86 207 8.25e-33 125
MS.gene48476.t1 AT4G32730 44.262 122 65 1 30 148 86 207 8.49e-33 125
MS.gene48476.t1 AT3G29020 50.495 101 50 0 31 131 65 165 1.02e-32 119
MS.gene48476.t1 AT5G11510 43.243 111 63 0 30 140 80 190 1.07e-32 125
MS.gene48476.t1 AT5G11510 43.243 111 63 0 30 140 80 190 1.11e-32 125
MS.gene48476.t1 AT3G29020 50.495 101 50 0 31 131 67 167 3.04e-32 119
MS.gene48476.t1 AT5G02320 36.813 182 104 4 30 207 66 240 3.74e-32 122
MS.gene48476.t1 AT5G02320 36.813 182 104 4 30 207 126 300 6.82e-32 122
MS.gene48476.t1 AT5G02320 36.813 182 104 4 30 207 126 300 6.82e-32 122
MS.gene48476.t1 AT1G74430 53.271 107 49 1 31 136 14 120 3.18e-31 116
MS.gene48476.t1 AT5G40330 47.009 117 57 2 31 142 14 130 1.71e-30 112
MS.gene48476.t1 AT5G06100 50.000 106 52 1 31 135 34 139 1.83e-30 117
MS.gene48476.t1 AT3G11440 48.113 106 54 1 31 135 43 148 2.11e-30 117
MS.gene48476.t1 AT5G14750 49.524 105 52 1 31 134 18 122 2.41e-30 112
MS.gene48476.t1 AT5G06100 50.000 106 52 1 31 135 34 139 3.43e-30 117
MS.gene48476.t1 AT5G06100 50.000 106 52 1 31 135 34 139 3.43e-30 117
MS.gene48476.t1 AT5G06100 50.000 106 52 1 31 135 34 139 3.43e-30 117
MS.gene48476.t1 AT5G06100 50.000 106 52 1 31 135 34 139 3.43e-30 117
MS.gene48476.t1 AT3G11440 48.113 106 54 1 31 135 43 148 4.06e-30 117
MS.gene48476.t1 AT3G11440 48.113 106 54 1 31 135 43 148 4.06e-30 117
MS.gene48476.t1 AT3G11440 48.113 106 54 1 31 135 43 148 4.06e-30 117
MS.gene48476.t1 AT4G13480 49.515 103 51 1 31 132 8 110 8.02e-30 112
MS.gene48476.t1 AT1G06180 50.467 107 52 1 26 131 9 115 1.04e-29 111
MS.gene48476.t1 AT5G15310 50.926 108 52 1 25 131 8 115 1.18e-29 113
MS.gene48476.t1 AT5G15310 50.926 108 52 1 25 131 8 115 1.22e-29 112
MS.gene48476.t1 AT5G40360 42.857 119 67 1 22 139 148 266 2.21e-29 113
MS.gene48476.t1 AT5G15310 50.926 108 52 1 25 131 8 115 2.27e-29 110
MS.gene48476.t1 AT3G24310 49.020 102 51 1 31 131 20 121 2.88e-29 110
MS.gene48476.t1 AT4G28110 50.000 102 50 1 31 131 14 115 2.89e-29 111
MS.gene48476.t1 AT3G28470 55.670 97 42 1 31 126 14 110 3.34e-29 111
MS.gene48476.t1 AT2G32460 49.057 106 53 1 31 135 20 125 5.20e-29 114
MS.gene48476.t1 AT3G60460 51.923 104 48 2 31 132 13 116 6.07e-29 110
MS.gene48476.t1 AT2G32460 49.057 106 53 1 31 135 8 113 6.20e-29 113
MS.gene48476.t1 AT4G37780 45.763 118 62 2 25 140 8 125 6.32e-29 110
MS.gene48476.t1 AT3G01140 51.961 102 48 1 31 131 14 115 7.73e-29 111
MS.gene48476.t1 AT5G56110 50.980 102 49 1 31 131 14 115 8.46e-29 110
MS.gene48476.t1 AT5G65230 49.020 102 51 1 31 131 14 115 1.27e-28 110
MS.gene48476.t1 AT3G01140 51.961 102 48 1 31 131 57 158 1.52e-28 111
MS.gene48476.t1 AT1G79180 44.094 127 70 1 31 156 16 142 1.63e-28 109
MS.gene48476.t1 AT2G31180 43.846 130 66 3 31 159 14 137 2.76e-28 107
MS.gene48476.t1 AT1G18710 51.961 102 48 1 31 131 14 115 2.86e-28 108
MS.gene48476.t1 AT1G56160 47.748 111 53 3 23 131 10 117 3.20e-28 108
MS.gene48476.t1 AT3G61250 46.296 108 57 1 25 131 8 115 3.28e-28 108
MS.gene48476.t1 AT3G27920 50.980 102 49 1 31 131 16 117 3.65e-28 107
MS.gene48476.t1 AT5G62470 46.226 106 57 0 26 131 9 114 4.63e-28 109
MS.gene48476.t1 AT5G59780 44.231 104 55 2 31 132 10 112 5.35e-28 106
MS.gene48476.t1 AT3G23250 45.794 107 57 1 26 131 9 115 8.82e-28 107
MS.gene48476.t1 AT3G46130 45.192 104 54 2 31 132 11 113 9.03e-28 106
MS.gene48476.t1 AT3G30210 47.525 101 52 1 31 130 29 129 9.71e-28 107
MS.gene48476.t1 AT5G55020 50.495 101 49 1 31 130 28 128 1.07e-27 110
MS.gene48476.t1 AT5G10280 47.059 102 53 1 31 131 14 115 1.11e-27 108
MS.gene48476.t1 AT4G21440 47.059 102 53 1 31 131 14 115 1.56e-27 108
MS.gene48476.t1 AT2G47190 45.133 113 61 1 21 132 12 124 1.79e-27 106
MS.gene48476.t1 AT4G05100 48.039 102 52 1 31 131 15 116 2.37e-27 107
MS.gene48476.t1 AT5G60890 50.000 102 50 1 31 131 14 115 2.64e-27 106
MS.gene48476.t1 AT5G61420 49.020 102 51 1 31 131 14 115 2.89e-27 107
MS.gene48476.t1 AT5G54230 48.039 102 52 1 31 131 14 115 3.20e-27 106
MS.gene48476.t1 AT5G07690 48.515 101 51 1 31 130 14 114 3.35e-27 107
MS.gene48476.t1 AT1G16490 49.020 102 51 1 31 131 16 117 3.61e-27 105
MS.gene48476.t1 AT5G52600 52.427 103 46 2 31 131 14 115 3.95e-27 103
MS.gene48476.t1 AT3G08500 45.455 132 71 1 1 131 2 133 7.84e-27 105
MS.gene48476.t1 AT4G26930 47.525 101 52 1 31 130 21 121 8.51e-27 106
MS.gene48476.t1 AT5G07700 49.020 102 51 1 31 131 14 115 8.76e-27 105
MS.gene48476.t1 AT5G07700 49.020 102 51 1 31 131 14 115 8.76e-27 105
MS.gene48476.t1 AT5G39700 45.455 99 54 0 32 130 57 155 1.07e-26 102
MS.gene48476.t1 AT1G18570 44.643 112 61 1 21 131 5 116 1.08e-26 105
MS.gene48476.t1 AT3G53200 45.631 103 53 2 31 131 11 112 1.20e-26 103
MS.gene48476.t1 AT1G25340 43.137 102 54 1 31 132 20 117 1.26e-26 104
MS.gene48476.t1 AT1G22640 47.059 102 53 1 31 131 14 115 1.50e-26 103
MS.gene48476.t1 AT5G62470 45.794 107 57 1 26 131 9 115 2.05e-26 105
MS.gene48476.t1 AT1G74650 47.664 107 55 1 26 131 9 115 2.09e-26 104
MS.gene48476.t1 AT1G25340 43.269 104 56 2 31 132 20 122 2.10e-26 103
MS.gene48476.t1 AT1G57560 35.829 187 105 4 31 211 14 191 2.18e-26 104
MS.gene48476.t1 AT2G26960 44.167 120 66 1 17 135 8 127 2.41e-26 105
MS.gene48476.t1 AT1G25340 43.137 102 54 1 31 132 20 117 2.50e-26 103
MS.gene48476.t1 AT4G00540 46.154 104 53 1 31 131 103 206 2.57e-26 105
MS.gene48476.t1 AT1G66230 47.115 104 52 2 31 132 14 116 2.77e-26 103
MS.gene48476.t1 AT1G74080 45.045 111 57 2 31 140 14 121 2.95e-26 104
MS.gene48476.t1 AT3G12720 46.729 107 56 1 31 136 24 130 3.32e-26 103
MS.gene48476.t1 AT3G13540 44.860 107 58 1 26 131 20 126 3.70e-26 102
MS.gene48476.t1 AT5G40350 42.478 113 64 1 31 142 19 131 3.86e-26 101
MS.gene48476.t1 AT5G57620 47.573 103 52 2 31 131 14 116 4.45e-26 103
MS.gene48476.t1 AT4G00540 46.154 104 53 1 31 131 101 204 4.71e-26 105
MS.gene48476.t1 AT5G16770 45.098 102 55 1 31 131 14 115 5.36e-26 103
MS.gene48476.t1 AT5G16770 45.098 102 55 1 31 131 14 115 5.36e-26 103
MS.gene48476.t1 AT3G02940 44.118 102 56 1 31 131 14 115 6.18e-26 103
MS.gene48476.t1 AT3G47600 44.444 108 59 1 25 131 8 115 7.37e-26 103
MS.gene48476.t1 AT5G16770 45.098 102 55 1 31 131 14 115 7.63e-26 103
MS.gene48476.t1 AT5G16770 45.098 102 55 1 31 131 14 115 7.63e-26 103
MS.gene48476.t1 AT1G34670 45.098 102 55 1 31 131 14 115 7.86e-26 103
MS.gene48476.t1 AT4G12350 45.370 108 58 1 25 131 8 115 8.80e-26 102
MS.gene48476.t1 AT3G02940 44.118 102 56 1 31 131 14 115 9.66e-26 102
MS.gene48476.t1 AT3G02940 44.118 102 56 1 31 131 14 115 9.66e-26 102
MS.gene48476.t1 AT1G57560 49.020 102 51 1 31 131 14 115 9.72e-26 101
MS.gene48476.t1 AT5G12870 50.000 102 50 1 31 131 20 121 1.25e-25 101
MS.gene48476.t1 AT5G23000 48.571 105 48 3 31 131 14 116 1.37e-25 102
MS.gene48476.t1 AT4G01680 50.000 102 50 1 31 131 14 115 1.38e-25 100
MS.gene48476.t1 AT5G35550 50.000 102 50 1 31 131 16 117 1.44e-25 100
MS.gene48476.t1 AT1G63910 49.091 110 53 2 23 131 8 115 1.47e-25 103
MS.gene48476.t1 AT3G01530 39.552 134 73 3 31 157 27 159 1.47e-25 99.8
MS.gene48476.t1 AT3G13890 48.148 108 55 1 25 131 8 115 1.73e-25 102
MS.gene48476.t1 AT4G25560 46.154 104 51 2 31 131 12 113 1.96e-25 101
MS.gene48476.t1 AT5G16600 46.602 103 52 2 31 131 14 115 2.11e-25 102
MS.gene48476.t1 AT4G01680 50.000 102 50 1 31 131 14 115 2.76e-25 101
MS.gene48476.t1 AT5G26660 50.000 102 50 1 31 131 14 115 2.92e-25 102
MS.gene48476.t1 AT2G16720 45.794 107 57 1 31 136 14 120 3.23e-25 100
MS.gene48476.t1 AT4G17785 46.078 102 54 1 31 131 15 116 3.27e-25 101
MS.gene48476.t1 AT3G48920 43.103 116 65 1 16 130 5 120 3.83e-25 99.8
MS.gene48476.t1 AT1G35515 43.137 102 57 1 31 131 14 115 4.19e-25 98.6
MS.gene48476.t1 AT5G49330 46.729 107 56 1 26 131 9 115 4.30e-25 101
MS.gene48476.t1 AT4G17785 46.078 102 54 1 31 131 15 116 4.53e-25 101
MS.gene48476.t1 AT1G08810 45.370 108 58 1 25 131 8 115 4.99e-25 100
MS.gene48476.t1 AT4G22680 43.519 108 60 1 25 131 8 115 5.20e-25 99.8
MS.gene48476.t1 AT3G28910 46.078 102 54 1 31 131 14 115 5.29e-25 100
MS.gene48476.t1 AT1G48000 44.660 103 56 1 31 132 34 136 5.86e-25 99.0
MS.gene48476.t1 AT1G68320 41.748 103 59 1 31 132 21 123 5.91e-25 99.8
MS.gene48476.t1 AT3G12820 46.078 102 54 1 31 131 16 117 6.12e-25 99.0
MS.gene48476.t1 AT4G09460 47.059 102 53 1 31 131 14 115 8.30e-25 98.6
MS.gene48476.t1 AT3G27810 44.554 101 55 1 31 130 22 122 8.45e-25 98.2
MS.gene48476.t1 AT4G38620 47.059 102 53 1 31 131 14 115 9.15e-25 99.4
MS.gene48476.t1 AT3G13890 46.154 117 53 2 25 131 8 124 9.29e-25 100
MS.gene48476.t1 AT5G65790 46.789 109 56 2 25 131 8 116 9.39e-25 100
MS.gene48476.t1 AT3G49690 47.573 103 52 2 31 131 14 116 1.29e-24 99.4
MS.gene48476.t1 AT1G09540 48.039 102 52 1 31 131 14 115 1.44e-24 100
MS.gene48476.t1 AT4G34990 46.078 102 54 1 31 131 14 115 1.62e-24 98.6
MS.gene48476.t1 AT2G26950 41.818 110 55 2 31 135 18 123 3.00e-24 99.8
MS.gene48476.t1 AT1G79180 35.000 160 70 2 31 156 16 175 3.19e-24 98.6
MS.gene48476.t1 AT4G01680 45.614 114 49 2 31 131 14 127 4.15e-24 98.6
MS.gene48476.t1 AT5G14340 40.367 109 64 1 25 132 20 128 4.26e-24 97.4
MS.gene48476.t1 AT3G62610 46.078 102 54 1 31 131 14 115 1.42e-23 97.1
MS.gene48476.t1 AT5G52260 47.573 103 51 2 31 131 14 115 1.84e-23 95.5
MS.gene48476.t1 AT2G36890 46.602 103 53 2 31 131 14 116 2.93e-23 95.5
MS.gene48476.t1 AT2G25230 38.393 112 69 0 26 137 21 132 4.79e-23 93.6
MS.gene48476.t1 AT2G36890 46.602 103 53 2 31 131 55 157 5.02e-23 95.5
MS.gene48476.t1 AT2G47460 45.098 102 55 1 31 131 14 115 6.81e-23 95.9
MS.gene48476.t1 AT3G06490 41.026 117 68 1 17 132 7 123 1.60e-22 94.0
MS.gene48476.t1 AT5G49620 40.909 110 64 1 24 132 21 130 2.15e-22 93.6
MS.gene48476.t1 AT5G14750 54.930 71 32 0 64 134 18 88 2.71e-22 90.1
MS.gene48476.t1 AT5G62320 42.202 109 55 2 31 131 15 123 1.75e-21 89.7
MS.gene48476.t1 AT3G53200 52.941 68 32 0 64 131 12 79 3.73e-21 88.2
MS.gene48476.t1 AT5G40430 39.130 115 68 2 26 140 49 161 7.37e-21 88.2
MS.gene48476.t1 AT5G35550 55.128 78 33 1 56 131 43 120 8.19e-21 88.2
MS.gene48476.t1 AT1G66380 44.118 102 56 1 31 131 10 111 1.63e-20 84.7
MS.gene48476.t1 AT1G66370 41.176 102 59 1 31 131 10 111 1.89e-20 87.0
MS.gene48476.t1 AT5G59780 49.275 69 35 0 64 132 23 91 3.74e-20 85.5
MS.gene48476.t1 AT3G12820 54.412 68 31 0 64 131 2 69 6.36e-20 84.3
MS.gene48476.t1 AT1G14350 41.414 99 58 0 34 132 28 126 6.51e-20 87.8
MS.gene48476.t1 AT1G14350 41.414 99 58 0 34 132 28 126 6.51e-20 87.8
MS.gene48476.t1 AT3G46130 49.275 69 35 0 64 132 23 91 8.42e-20 85.1
MS.gene48476.t1 AT3G46130 49.275 69 35 0 64 132 13 81 9.36e-20 84.7
MS.gene48476.t1 AT5G26660 57.353 68 29 0 64 131 17 84 1.18e-19 86.3
MS.gene48476.t1 AT1G66390 42.157 102 58 1 31 131 10 111 7.46e-19 82.8
MS.gene48476.t1 AT5G49620 36.290 124 64 2 24 132 21 144 8.05e-19 84.0
MS.gene48476.t1 AT5G40350 45.570 79 43 0 64 142 8 86 8.71e-19 80.9
MS.gene48476.t1 AT1G56650 42.157 102 58 1 31 131 10 111 8.82e-19 82.8
MS.gene48476.t1 AT2G02820 39.394 99 60 0 34 132 33 131 1.18e-18 83.6
MS.gene48476.t1 AT2G02820 39.394 99 60 0 34 132 33 131 1.38e-18 84.3
MS.gene48476.t1 AT2G02820 39.394 99 60 0 34 132 33 131 1.41e-18 84.3
MS.gene48476.t1 AT3G27810 49.254 67 34 0 64 130 7 73 1.27e-17 77.8
MS.gene48476.t1 AT3G47600 50.000 68 34 0 64 131 42 109 5.45e-17 79.0
MS.gene48476.t1 AT1G71030 53.846 65 30 0 67 131 5 69 1.83e-16 75.1
MS.gene48476.t1 AT1G71030 53.846 65 30 0 67 131 19 83 2.51e-16 74.7
MS.gene48476.t1 AT3G18100 39.362 94 57 0 31 124 546 639 1.74e-15 75.5
MS.gene48476.t1 AT3G18100 32.710 107 70 2 30 135 494 599 1.11e-11 64.3
MS.gene48476.t1 AT3G18100 39.362 94 57 0 31 124 498 591 1.92e-15 75.5
MS.gene48476.t1 AT3G18100 32.710 107 70 2 30 135 446 551 1.26e-11 64.3
MS.gene48476.t1 AT3G18100 39.362 94 57 0 31 124 385 478 2.35e-15 75.1
MS.gene48476.t1 AT3G18100 34.000 100 64 2 30 128 333 431 1.58e-11 63.9
MS.gene48476.t1 AT3G18100 39.362 94 57 0 31 124 333 426 2.62e-15 75.1
MS.gene48476.t1 AT3G18100 34.000 100 64 2 30 128 281 379 1.69e-11 63.9
MS.gene48476.t1 AT5G14750 46.154 65 35 0 74 138 1 65 4.76e-15 70.1
MS.gene48476.t1 AT5G14750 46.154 65 35 0 74 138 1 65 4.76e-15 70.1
MS.gene48476.t1 AT1G66380 50.000 68 34 0 64 131 11 78 7.42e-15 68.6
MS.gene48476.t1 AT1G18960 36.134 119 61 4 14 131 4 108 3.33e-14 70.9
MS.gene48476.t1 AT1G22640 49.123 57 29 0 75 131 2 58 2.10e-13 67.0
MS.gene48476.t1 AT2G37630 36.170 94 57 1 34 124 7 100 6.56e-13 67.4
MS.gene48476.t1 AT4G25560 53.333 45 21 0 87 131 3 47 2.31e-12 64.7
MS.gene48476.t1 AT3G23250 46.552 58 31 0 74 131 1 58 2.47e-12 64.7
MS.gene48476.t1 AT5G59780 46.809 47 25 0 86 132 1 47 2.65e-11 60.8
MS.gene48476.t1 AT3G46130 50.000 44 22 0 89 132 4 47 4.73e-11 60.5

Find 67 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTCTTCTTGTGAAGAAAA+TGG 0.249084 3.1:+80405297 None:intergenic
TGATTCTGTCTAGTTTGTTT+TGG 0.268136 3.1:+80405481 None:intergenic
AAAATGTTCCGACTGAGTTT+TGG 0.275443 3.1:-80404936 MS.gene48476:CDS
GGTGGTTCTGTTACGGTTGC+TGG 0.281643 3.1:-80405126 MS.gene48476:CDS
TGCGTTGACTCTTGCTCCTC+CGG 0.302915 3.1:-80405028 MS.gene48476:CDS
GTGTTATTGCAAGAGAAGTT+AGG 0.310866 3.1:-80404900 MS.gene48476:CDS
CGGGGAATGGTGTGGAAGAT+AGG 0.313721 3.1:-80405008 MS.gene48476:CDS
CTCATCAGCCGCTACATAAA+AGG 0.317657 3.1:-80405384 MS.gene48476:CDS
ACGGTTGCTGGAGGTGTTAA+TGG 0.340790 3.1:-80405114 MS.gene48476:CDS
AACGAGGGTGGAAATTGTTC+TGG 0.404860 3.1:-80405087 MS.gene48476:CDS
ATAGCGGCACATGCTCAATA+TGG 0.421208 3.1:-80405267 MS.gene48476:CDS
GCGTTGACTCTTGCTCCTCC+GGG 0.426703 3.1:-80405027 MS.gene48476:CDS
CGCTACATAAAAGGAAGGTC+AGG 0.427278 3.1:-80405375 MS.gene48476:CDS
AACAACATGGAGCTAGAAAC+TGG 0.427459 3.1:-80405410 MS.gene48476:CDS
TGTTATTGCAAGAGAAGTTA+GGG 0.434501 3.1:-80404899 MS.gene48476:CDS
CGTAGAGCGGGTTGTGGCGG+TGG 0.434818 3.1:-80405162 MS.gene48476:CDS
TCCTTCACCGTCGGTGTCGC+CGG 0.437603 3.1:-80404959 MS.gene48476:CDS
TCCATGTTGTTCAACCAGTC+TGG 0.437865 3.1:+80405422 None:intergenic
GGCGGTGGTCGTGGTGTTTG+TGG 0.441386 3.1:-80405147 MS.gene48476:CDS
ACTCTTGCTCCTCCGGGGAA+TGG 0.442746 3.1:-80405021 MS.gene48476:CDS
ATAATGCTGTCAAGAATCAT+TGG 0.445366 3.1:-80405200 MS.gene48476:CDS
CTGTCTTCTTCTGCACTCCA+TGG 0.453840 3.1:+80405453 None:intergenic
TGTGGAAGATAGGGAGGAAA+TGG 0.456175 3.1:-80404998 MS.gene48476:CDS
GCGGGTTGTGGCGGTGGTCG+TGG 0.476766 3.1:-80405156 MS.gene48476:CDS
TGTTTGTGGTGGTTCTGTTA+CGG 0.498438 3.1:-80405133 MS.gene48476:CDS
GGGGAATGGTGTGGAAGATA+GGG 0.506422 3.1:-80405007 MS.gene48476:CDS
GTTTGTTGGGTTTGATTCTG+AGG 0.507000 3.1:+80405503 None:intergenic
TGCTCCTCCGGGGAATGGTG+TGG 0.525929 3.1:-80405016 MS.gene48476:CDS
AGGAAATGGTTGGTGATCAT+CGG 0.529521 3.1:-80404984 MS.gene48476:CDS
GTTAATGGTGGTAACGAGGG+TGG 0.535237 3.1:-80405099 MS.gene48476:CDS
CTATCTTCCACACCATTCCC+CGG 0.547645 3.1:+80405009 None:intergenic
GGTGTTAATGGTGGTAACGA+GGG 0.549090 3.1:-80405102 MS.gene48476:CDS
TCTACGCTTAAGCGTAGAGC+GGG 0.550016 3.1:-80405174 MS.gene48476:CDS
ATGCTCAATATGGTAACCGA+TGG 0.553468 3.1:-80405257 MS.gene48476:CDS
AAGCGTAGAGCGGGTTGTGG+CGG 0.558560 3.1:-80405165 MS.gene48476:CDS
CTTAAGCGTAGAGCGGGTTG+TGG 0.561195 3.1:-80405168 MS.gene48476:CDS
GACTCAGCTGATTACACCAC+CGG 0.566690 3.1:+80405337 None:intergenic
TAGACAGAATCAAAGGTCCA+TGG 0.567377 3.1:-80405470 MS.gene48476:CDS
ACCAGACTGGTTGAACAACA+TGG 0.574628 3.1:-80405423 MS.gene48476:CDS
AACAAACTAGACAGAATCAA+AGG 0.575442 3.1:-80405477 MS.gene48476:CDS
TCATCGGTTTCCTTCACCGT+CGG 0.580511 3.1:-80404968 MS.gene48476:CDS
GCAAGAGTCAACGCAGTCAA+CGG 0.583462 3.1:+80405036 None:intergenic
CAGGAAAATCTTGCAGACTC+CGG 0.584579 3.1:-80405356 MS.gene48476:CDS
TCCGGCGACACCGACGGTGA+AGG 0.588009 3.1:+80404958 None:intergenic
GAATGGTGTGGAAGATAGGG+AGG 0.593567 3.1:-80405004 MS.gene48476:CDS
GGTGGTCGTGGTGTTTGTGG+TGG 0.595288 3.1:-80405144 MS.gene48476:CDS
ACCGATGGGCTACCATTGCA+AGG 0.605118 3.1:-80405242 MS.gene48476:CDS
ACCAGGTAAAAGCCTTGCAA+TGG 0.616319 3.1:+80405230 None:intergenic
TGCTCAATATGGTAACCGAT+GGG 0.623211 3.1:-80405256 MS.gene48476:CDS
AATGGACGGTGCTCCACGGT+GGG 0.624999 3.1:+80405315 None:intergenic
ACAGCATTATCTGTTCTACC+AGG 0.625109 3.1:+80405213 None:intergenic
AGGTGTTAATGGTGGTAACG+AGG 0.628177 3.1:-80405103 MS.gene48476:CDS
GAAGATAGGGAGGAAATGGT+TGG 0.630323 3.1:-80404994 MS.gene48476:CDS
ATCACATCCCAAAACTCAGT+CGG 0.631724 3.1:+80404928 None:intergenic
AGAAAATGGACGGTGCTCCA+CGG 0.633813 3.1:+80405311 None:intergenic
GAAAATCTTGCAGACTCCGG+TGG 0.636840 3.1:-80405353 MS.gene48476:CDS
GCCTTGCAATGGTAGCCCAT+CGG 0.640144 3.1:+80405241 None:intergenic
CTTCTTGTGAAGAAAATGGA+CGG 0.646016 3.1:+80405301 None:intergenic
CGTTGACTCTTGCTCCTCCG+GGG 0.647010 3.1:-80405026 MS.gene48476:CDS
GGTTCTGTTACGGTTGCTGG+AGG 0.649526 3.1:-80405123 MS.gene48476:CDS
TCAGCCGCTACATAAAAGGA+AGG 0.658689 3.1:-80405380 MS.gene48476:CDS
CTCTACGCTTAAGCGTAGAG+CGG 0.680224 3.1:-80405175 MS.gene48476:CDS
AAATGGACGGTGCTCCACGG+TGG 0.699602 3.1:+80405314 None:intergenic
GTTGCTGGAGGTGTTAATGG+TGG 0.730010 3.1:-80405111 MS.gene48476:CDS
AGAAGACGAAACAATCATAG+CGG 0.749421 3.1:-80405283 MS.gene48476:CDS
TAATCAGCTGAGTCCCACCG+TGG 0.751068 3.1:-80405328 MS.gene48476:CDS
TCTTCCACACCATTCCCCGG+AGG 0.762613 3.1:+80405012 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACAAACTAGACAGAATCAA+AGG - chr3.1:80404942-80404961 MS.gene48476:CDS 30.0%
ATAATGCTGTCAAGAATCAT+TGG - chr3.1:80405219-80405238 MS.gene48476:CDS 30.0%
TGTTATTGCAAGAGAAGTTA+GGG - chr3.1:80405520-80405539 MS.gene48476:CDS 30.0%
!!! CTAGTTTGTTTTGGTTTGTT+GGG + chr3.1:80404932-80404951 None:intergenic 30.0%
!!! TCTAGTTTGTTTTGGTTTGT+TGG + chr3.1:80404933-80404952 None:intergenic 30.0%
!!! TGATTCTGTCTAGTTTGTTT+TGG + chr3.1:80404941-80404960 None:intergenic 30.0%
AGAAGACGAAACAATCATAG+CGG - chr3.1:80405136-80405155 MS.gene48476:CDS 35.0%
CTTCTTGTGAAGAAAATGGA+CGG + chr3.1:80405121-80405140 None:intergenic 35.0%
TCGTCTTCTTGTGAAGAAAA+TGG + chr3.1:80405125-80405144 None:intergenic 35.0%
! AAAATGTTCCGACTGAGTTT+TGG - chr3.1:80405483-80405502 MS.gene48476:CDS 35.0%
! AAATGTTCCGACTGAGTTTT+GGG - chr3.1:80405484-80405503 MS.gene48476:CDS 35.0%
! GTGTTATTGCAAGAGAAGTT+AGG - chr3.1:80405519-80405538 MS.gene48476:CDS 35.0%
!! AGACAGAATTTTAACCAGAC+TGG - chr3.1:80404983-80405002 MS.gene48476:CDS 35.0%
AACAACATGGAGCTAGAAAC+TGG - chr3.1:80405009-80405028 MS.gene48476:CDS 40.0%
ACAGCATTATCTGTTCTACC+AGG + chr3.1:80405209-80405228 None:intergenic 40.0%
ATCACATCCCAAAACTCAGT+CGG + chr3.1:80405494-80405513 None:intergenic 40.0%
ATGCTCAATATGGTAACCGA+TGG - chr3.1:80405162-80405181 MS.gene48476:CDS 40.0%
TAGACAGAATCAAAGGTCCA+TGG - chr3.1:80404949-80404968 MS.gene48476:CDS 40.0%
TGCTCAATATGGTAACCGAT+GGG - chr3.1:80405163-80405182 MS.gene48476:CDS 40.0%
! AACTCAGTCGGAACATTTTC+CGG + chr3.1:80405482-80405501 None:intergenic 40.0%
! CTGACCTTCCTTTTATGTAG+CGG + chr3.1:80405046-80405065 None:intergenic 40.0%
! GTTTGTTGGGTTTGATTCTG+AGG + chr3.1:80404919-80404938 None:intergenic 40.0%
! TGTTTGTGGTGGTTCTGTTA+CGG - chr3.1:80405286-80405305 MS.gene48476:CDS 40.0%
!! AGGAAATGGTTGGTGATCAT+CGG - chr3.1:80405435-80405454 MS.gene48476:CDS 40.0%
!! TTCTGGTCAGTTTGCTTTTC+AGG - chr3.1:80405349-80405368 MS.gene48476:CDS 40.0%
AACGAGGGTGGAAATTGTTC+TGG - chr3.1:80405332-80405351 MS.gene48476:CDS 45.0%
ACCAGGTAAAAGCCTTGCAA+TGG + chr3.1:80405192-80405211 None:intergenic 45.0%
ATAGCGGCACATGCTCAATA+TGG - chr3.1:80405152-80405171 MS.gene48476:CDS 45.0%
CAGGAAAATCTTGCAGACTC+CGG - chr3.1:80405063-80405082 MS.gene48476:CDS 45.0%
CGCTACATAAAAGGAAGGTC+AGG - chr3.1:80405044-80405063 MS.gene48476:CDS 45.0%
CTCATCAGCCGCTACATAAA+AGG - chr3.1:80405035-80405054 MS.gene48476:CDS 45.0%
GAAGATAGGGAGGAAATGGT+TGG - chr3.1:80405425-80405444 MS.gene48476:CDS 45.0%
TCAGCCGCTACATAAAAGGA+AGG - chr3.1:80405039-80405058 MS.gene48476:CDS 45.0%
TCCATGTTGTTCAACCAGTC+TGG + chr3.1:80405000-80405019 None:intergenic 45.0%
TGTGGAAGATAGGGAGGAAA+TGG - chr3.1:80405421-80405440 MS.gene48476:CDS 45.0%
! ACCAGACTGGTTGAACAACA+TGG - chr3.1:80404996-80405015 MS.gene48476:CDS 45.0%
! ACCATTGCAAGGCTTTTACC+TGG - chr3.1:80405188-80405207 MS.gene48476:CDS 45.0%
! AGGTGTTAATGGTGGTAACG+AGG - chr3.1:80405316-80405335 MS.gene48476:CDS 45.0%
! GGTGTTAATGGTGGTAACGA+GGG - chr3.1:80405317-80405336 MS.gene48476:CDS 45.0%
!! TGGTCAGTTTGCTTTTCAGG+TGG - chr3.1:80405352-80405371 MS.gene48476:CDS 45.0%
!!! GAGTTTTGGGATGTGATGAG+AGG - chr3.1:80405497-80405516 MS.gene48476:CDS 45.0%
AGAAAATGGACGGTGCTCCA+CGG + chr3.1:80405111-80405130 None:intergenic 50.0%
CTATCTTCCACACCATTCCC+CGG + chr3.1:80405413-80405432 None:intergenic 50.0%
CTCTACGCTTAAGCGTAGAG+CGG - chr3.1:80405244-80405263 MS.gene48476:CDS 50.0%
CTGTCTTCTTCTGCACTCCA+TGG + chr3.1:80404969-80404988 None:intergenic 50.0%
GAAAATCTTGCAGACTCCGG+TGG - chr3.1:80405066-80405085 MS.gene48476:CDS 50.0%
GAATGGTGTGGAAGATAGGG+AGG - chr3.1:80405415-80405434 MS.gene48476:CDS 50.0%
GACTCAGCTGATTACACCAC+CGG + chr3.1:80405085-80405104 None:intergenic 50.0%
GCAAGAGTCAACGCAGTCAA+CGG + chr3.1:80405386-80405405 None:intergenic 50.0%
GGGGAATGGTGTGGAAGATA+GGG - chr3.1:80405412-80405431 MS.gene48476:CDS 50.0%
TCTACGCTTAAGCGTAGAGC+GGG - chr3.1:80405245-80405264 MS.gene48476:CDS 50.0%
! GTTAATGGTGGTAACGAGGG+TGG - chr3.1:80405320-80405339 MS.gene48476:CDS 50.0%
!! ACGGTTGCTGGAGGTGTTAA+TGG - chr3.1:80405305-80405324 MS.gene48476:CDS 50.0%
!! GTTGCTGGAGGTGTTAATGG+TGG - chr3.1:80405308-80405327 MS.gene48476:CDS 50.0%
!! TCATCGGTTTCCTTCACCGT+CGG - chr3.1:80405451-80405470 MS.gene48476:CDS 50.0%
CGGGGAATGGTGTGGAAGAT+AGG - chr3.1:80405411-80405430 MS.gene48476:CDS 55.0%
GCCTTGCAATGGTAGCCCAT+CGG + chr3.1:80405181-80405200 None:intergenic 55.0%
GGTTCTGTTACGGTTGCTGG+AGG - chr3.1:80405296-80405315 MS.gene48476:CDS 55.0%
TAATCAGCTGAGTCCCACCG+TGG - chr3.1:80405091-80405110 MS.gene48476:CDS 55.0%
! ACATTTTCCGGCGACACCGA+CGG + chr3.1:80405470-80405489 None:intergenic 55.0%
! GGTGGTTCTGTTACGGTTGC+TGG - chr3.1:80405293-80405312 MS.gene48476:CDS 55.0%
!! ACCGATGGGCTACCATTGCA+AGG - chr3.1:80405177-80405196 MS.gene48476:CDS 55.0%
!! CTTAAGCGTAGAGCGGGTTG+TGG - chr3.1:80405251-80405270 MS.gene48476:CDS 55.0%
!! TGCGTTGACTCTTGCTCCTC+CGG - chr3.1:80405391-80405410 MS.gene48476:CDS 55.0%
AAATGGACGGTGCTCCACGG+TGG + chr3.1:80405108-80405127 None:intergenic 60.0%
AATGGACGGTGCTCCACGGT+GGG + chr3.1:80405107-80405126 None:intergenic 60.0%
ACTCTTGCTCCTCCGGGGAA+TGG - chr3.1:80405398-80405417 MS.gene48476:CDS 60.0%
GGTGGTCGTGGTGTTTGTGG+TGG - chr3.1:80405275-80405294 MS.gene48476:CDS 60.0%
TCTTCCACACCATTCCCCGG+AGG + chr3.1:80405410-80405429 None:intergenic 60.0%
!! AAGCGTAGAGCGGGTTGTGG+CGG - chr3.1:80405254-80405273 MS.gene48476:CDS 60.0%
!! CGTTGACTCTTGCTCCTCCG+GGG - chr3.1:80405393-80405412 MS.gene48476:CDS 60.0%
!! GCGTTGACTCTTGCTCCTCC+GGG - chr3.1:80405392-80405411 MS.gene48476:CDS 60.0%
GGCGGTGGTCGTGGTGTTTG+TGG - chr3.1:80405272-80405291 MS.gene48476:CDS 65.0%
TGCTCCTCCGGGGAATGGTG+TGG - chr3.1:80405403-80405422 MS.gene48476:CDS 65.0%
!! TCCTTCACCGTCGGTGTCGC+CGG - chr3.1:80405460-80405479 MS.gene48476:CDS 65.0%
TCCGGCGACACCGACGGTGA+AGG + chr3.1:80405464-80405483 None:intergenic 70.0%
!! CGTAGAGCGGGTTGTGGCGG+TGG - chr3.1:80405257-80405276 MS.gene48476:CDS 70.0%
! GCGGGTTGTGGCGGTGGTCG+TGG - chr3.1:80405263-80405282 MS.gene48476:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 80404870 80405571 80404870 ID=MS.gene48476
chr3.1 mRNA 80404870 80405571 80404870 ID=MS.gene48476.t1;Parent=MS.gene48476
chr3.1 exon 80404870 80405571 80404870 ID=MS.gene48476.t1.exon1;Parent=MS.gene48476.t1
chr3.1 CDS 80404870 80405571 80404870 ID=cds.MS.gene48476.t1;Parent=MS.gene48476.t1
Gene Sequence

>MS.gene48476

ATGAATAGAAGCTCTTCAACAACAACATCATCATCAGACTCATGTTCCTCAGAATCAAACCCAACAAACCAAAACAAACTAGACAGAATCAAAGGTCCATGGAGTGCAGAAGAAGACAGAATTTTAACCAGACTGGTTGAACAACATGGAGCTAGAAACTGGTCACTCATCAGCCGCTACATAAAAGGAAGGTCAGGAAAATCTTGCAGACTCCGGTGGTGTAATCAGCTGAGTCCCACCGTGGAGCACCGTCCATTTTCTTCACAAGAAGACGAAACAATCATAGCGGCACATGCTCAATATGGTAACCGATGGGCTACCATTGCAAGGCTTTTACCTGGTAGAACAGATAATGCTGTCAAGAATCATTGGAACTCTACGCTTAAGCGTAGAGCGGGTTGTGGCGGTGGTCGTGGTGTTTGTGGTGGTTCTGTTACGGTTGCTGGAGGTGTTAATGGTGGTAACGAGGGTGGAAATTGTTCTGGTCAGTTTGCTTTTCAGGTGGAAGATGATCCGTTGACTGCGTTGACTCTTGCTCCTCCGGGGAATGGTGTGGAAGATAGGGAGGAAATGGTTGGTGATCATCGGTTTCCTTCACCGTCGGTGTCGCCGGAAAATGTTCCGACTGAGTTTTGGGATGTGATGAGAGGTGTTATTGCAAGAGAAGTTAGGGAATATGTTTCTTCTAATTTTTCTCATTAA
Protein sequence

>MS.gene48476.t1

MNRSSSTTTSSSDSCSSESNPTNQNKLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAGCGGGRGVCGGSVTVAGGVNGGNEGGNCSGQFAFQVEDDPLTALTLAPPGNGVEDREEMVGDHRFPSPSVSPENVPTEFWDVMRGVIAREVREYVSSNFSH