Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49173.t1 | XP_003592164.1 | 96.5 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 4.50E-182 | 647.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49173.t1 | G7IDW3 | 96.5 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 3.3e-182 | 647.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055748 | MS.gene49173 | 0.812127 | 4.96E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene49173 | 0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene49173 | 0.800553 | 1.37E-48 | -1.69E-46 |
| MS.gene056266 | MS.gene49173 | 0.816209 | 6.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49173.t1 | MTR_1g099420 | 96.501 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 0.0 | 667 |
| MS.gene49173.t1 | MTR_8g099085 | 62.025 | 316 | 116 | 3 | 31 | 343 | 29 | 343 | 6.15e-140 | 400 |
| MS.gene49173.t1 | MTR_8g467540 | 28.033 | 239 | 160 | 4 | 110 | 339 | 85 | 320 | 4.45e-19 | 87.0 |
| MS.gene49173.t1 | MTR_8g467540 | 28.033 | 239 | 160 | 4 | 110 | 339 | 85 | 320 | 4.45e-19 | 87.0 |
| MS.gene49173.t1 | MTR_8g467540 | 26.923 | 208 | 144 | 3 | 110 | 310 | 85 | 291 | 1.16e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49173.t1 | AT5G60750 | 58.876 | 338 | 124 | 7 | 15 | 343 | 16 | 347 | 1.17e-133 | 385 |
| MS.gene49173.t1 | AT1G14270 | 25.595 | 336 | 203 | 8 | 16 | 341 | 38 | 336 | 5.29e-21 | 92.8 |
| MS.gene49173.t1 | AT1G14270 | 28.194 | 227 | 149 | 5 | 123 | 339 | 6 | 228 | 1.26e-17 | 81.6 |
| MS.gene49173.t1 | AT1G14270 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.75e-17 | 80.9 |
| MS.gene49173.t1 | AT1G14270 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.75e-17 | 80.9 |
| MS.gene49173.t1 | AT2G20725 | 38.462 | 143 | 71 | 5 | 203 | 339 | 168 | 299 | 9.01e-15 | 74.3 |
Find 92 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTCTTCCTCTTCTTCT+AGG | 0.182767 | 1.3:+68501693 | MS.gene49173:CDS |
| GAAGAACAGGCCACAAATTT+AGG | 0.188245 | 1.3:-68505287 | None:intergenic |
| CAAGATTCAGTCAAGTTTAA+AGG | 0.193284 | 1.3:+68502160 | MS.gene49173:CDS |
| TCCTCTGGATTTGCTCGTTT+TGG | 0.260324 | 1.3:+68504998 | MS.gene49173:CDS |
| ATGCTGCCACTTGTATTTCT+TGG | 0.277723 | 1.3:+68505534 | MS.gene49173:CDS |
| TGCCGTCCAAGGAACTTTCC+AGG | 0.319791 | 1.3:-68504331 | None:intergenic |
| AACACAATCTCCTCCCATAT+CGG | 0.322150 | 1.3:-68505408 | None:intergenic |
| TTTCAGTTTGTGCCCCGATA+TGG | 0.340536 | 1.3:+68505394 | MS.gene49173:CDS |
| TGGCAGTTTGATGTCGGTTT+GGG | 0.387411 | 1.3:+68505222 | MS.gene49173:CDS |
| GTGGCAGTTTGATGTCGGTT+TGG | 0.390131 | 1.3:+68505221 | MS.gene49173:CDS |
| GAGGAAGAATTGTGACGGAT+TGG | 0.393113 | 1.3:-68501683 | None:intergenic |
| GACGGCAAAGACCATTGTTC+AGG | 0.397126 | 1.3:+68504347 | MS.gene49173:CDS |
| AAACTATGCAACAACATTGA+TGG | 0.398683 | 1.3:-68505600 | None:intergenic |
| TTCAGTTTGTGCCCCGATAT+GGG | 0.398725 | 1.3:+68505395 | MS.gene49173:CDS |
| TCTACACTCGAGACCGTAAC+TGG | 0.401617 | 1.3:-68505318 | None:intergenic |
| CAATTCTTCCTCTTCTTCTA+GGG | 0.404564 | 1.3:+68501694 | MS.gene49173:CDS |
| GCATAGAGGGCCATTGCCAC+AGG | 0.414426 | 1.3:-68505363 | None:intergenic |
| TGACGGATTGGGAGAGAGAA+GGG | 0.417755 | 1.3:-68501671 | None:intergenic |
| ACACAATCTCCTCCCATATC+GGG | 0.418223 | 1.3:-68505407 | None:intergenic |
| AGGAAGAATTGTGACGGATT+GGG | 0.420903 | 1.3:-68501682 | None:intergenic |
| TTCTGCAGGTTATGCTCCTC+TGG | 0.428634 | 1.3:+68504983 | MS.gene49173:intron |
| GGAAAGCGAGAAGAGGTAGT+TGG | 0.435020 | 1.3:-68501731 | None:intergenic |
| TGTATTTCTTGGCATGGTGA+TGG | 0.438892 | 1.3:+68505545 | MS.gene49173:CDS |
| CAATGTTGTTGCATAGTTTG+TGG | 0.440983 | 1.3:+68505604 | MS.gene49173:CDS |
| TGGGAGGAGATTGTGTTTCG+TGG | 0.447082 | 1.3:+68505414 | MS.gene49173:CDS |
| CACAAATGAACCTAAATTTG+TGG | 0.454909 | 1.3:+68505277 | MS.gene49173:CDS |
| GCCACTTGTATTTCTTGGCA+TGG | 0.459834 | 1.3:+68505539 | MS.gene49173:CDS |
| ACTGGAGCATATTGAAGAAC+AGG | 0.460801 | 1.3:-68505300 | None:intergenic |
| TTGAACCCTGGAAAGTTCCT+TGG | 0.472723 | 1.3:+68504325 | MS.gene49173:CDS |
| CTGAAACTACCACCGCATAG+AGG | 0.472948 | 1.3:-68505377 | None:intergenic |
| TGCTATCCCAACCATACCTT+CGG | 0.475440 | 1.3:-68505127 | None:intergenic |
| GGTTCAAATTTGAACTCAAA+GGG | 0.479194 | 1.3:+68505196 | MS.gene49173:CDS |
| TCTTCAATATGCTCCAGTTA+CGG | 0.480251 | 1.3:+68505305 | MS.gene49173:CDS |
| GTATTTCTTGGCATGGTGAT+GGG | 0.481543 | 1.3:+68505546 | MS.gene49173:CDS |
| GCAACAACATTGATGGTAAG+AGG | 0.485919 | 1.3:-68505593 | None:intergenic |
| AAGTGAAACCCTAGAAGAAG+AGG | 0.492947 | 1.3:-68501702 | None:intergenic |
| GGCATGTACCTGGTTAAAGA+TGG | 0.496242 | 1.3:-68505447 | None:intergenic |
| TCAGAGTCATTACTTTCTGA+TGG | 0.496461 | 1.3:-68502115 | None:intergenic |
| TCCTTCTCCCATCTTTAACC+AGG | 0.506033 | 1.3:+68505439 | MS.gene49173:CDS |
| GCCGTCCAAGGAACTTTCCA+GGG | 0.511591 | 1.3:-68504330 | None:intergenic |
| TAGTAGATAAGGTGAATGAT+TGG | 0.516213 | 1.3:-68501757 | None:intergenic |
| TGGTTCAAATTTGAACTCAA+AGG | 0.516255 | 1.3:+68505195 | MS.gene49173:CDS |
| TACTTCATCGCTGTCTTGCA+AGG | 0.516888 | 1.3:+68505151 | MS.gene49173:CDS |
| TTAAACCACTCTCGTCTGAC+TGG | 0.517108 | 1.3:+68505175 | MS.gene49173:CDS |
| AGCACGAGACCCTGTGGCAA+TGG | 0.519544 | 1.3:+68505353 | MS.gene49173:CDS |
| TCAAGAGACTGTACAATGCT+TGG | 0.524335 | 1.3:-68505095 | None:intergenic |
| GTTACGTACGTTAGTAGATA+AGG | 0.529226 | 1.3:-68501768 | None:intergenic |
| GTGACGGATTGGGAGAGAGA+AGG | 0.533622 | 1.3:-68501672 | None:intergenic |
| TGAAGAAGAAATTGTGGTGG+TGG | 0.537612 | 1.3:-68501645 | None:intergenic |
| GACAGATGTTGCCGAAGGTA+TGG | 0.538716 | 1.3:+68505116 | MS.gene49173:CDS |
| GTGCTGTATTTGTACGGTCT+AGG | 0.541725 | 1.3:+68505568 | MS.gene49173:CDS |
| ATGTTGCCGAAGGTATGGTT+GGG | 0.545851 | 1.3:+68505121 | MS.gene49173:CDS |
| AATTTGAACTCAAAGGGAAG+TGG | 0.548895 | 1.3:+68505202 | MS.gene49173:CDS |
| GATGTTGCCGAAGGTATGGT+TGG | 0.549484 | 1.3:+68505120 | MS.gene49173:CDS |
| ACAATGGTCTTTGCCGTCCA+AGG | 0.552030 | 1.3:-68504342 | None:intergenic |
| CACAGGGTCTCGTGCTACAA+TGG | 0.554021 | 1.3:-68505346 | None:intergenic |
| TTGGAGTGGAAAGCGAGAAG+AGG | 0.569871 | 1.3:-68501738 | None:intergenic |
| GGGAAGTGGCAGTTTGATGT+CGG | 0.575002 | 1.3:+68505216 | MS.gene49173:CDS |
| GACGGATTGGGAGAGAGAAG+GGG | 0.578846 | 1.3:-68501670 | None:intergenic |
| TGAAACTACCACCGCATAGA+GGG | 0.578885 | 1.3:-68505376 | None:intergenic |
| AGAAATTGTGGTGGTGGACA+TGG | 0.580662 | 1.3:-68501639 | None:intergenic |
| ACTCCACACAGGCATGTACC+TGG | 0.581740 | 1.3:-68505457 | None:intergenic |
| CCAGGGTTCAACACTAAGAA+CGG | 0.585045 | 1.3:-68504313 | None:intergenic |
| GCATGTACCTGGTTAAAGAT+GGG | 0.588115 | 1.3:-68505446 | None:intergenic |
| ACCTGGTTAAAGATGGGAGA+AGG | 0.590179 | 1.3:-68505440 | None:intergenic |
| GGGGAGTGAAGAAGAAATTG+TGG | 0.598782 | 1.3:-68501651 | None:intergenic |
| CCGTTCTTAGTGTTGAACCC+TGG | 0.599304 | 1.3:+68504313 | MS.gene49173:CDS |
| TTGTGACAGATGATTGATGA+GGG | 0.604076 | 1.3:-68505259 | None:intergenic |
| CTGAATGTTAAAATGTGCGA+AGG | 0.606735 | 1.3:-68505508 | None:intergenic |
| TTGAACCAGTCAGACGAGAG+TGG | 0.614440 | 1.3:-68505180 | None:intergenic |
| TGATGGGTGCTGTATTTGTA+CGG | 0.616024 | 1.3:+68505562 | MS.gene49173:CDS |
| ACCCTGGAAAGTTCCTTGGA+CGG | 0.618545 | 1.3:+68504329 | MS.gene49173:CDS |
| TTGGCTTACTGCTCTTTACA+CGG | 0.621284 | 1.3:+68502213 | MS.gene49173:CDS |
| CATAGAGGGCCATTGCCACA+GGG | 0.622003 | 1.3:-68505362 | None:intergenic |
| CTCTTGACAGATGTTGCCGA+AGG | 0.624925 | 1.3:+68505111 | MS.gene49173:CDS |
| AAGAAGAGGAAGAATTGTGA+CGG | 0.629874 | 1.3:-68501688 | None:intergenic |
| GATAAGGTGAATGATTGGAG+TGG | 0.635242 | 1.3:-68501752 | None:intergenic |
| CACAATCTCCTCCCATATCG+GGG | 0.637448 | 1.3:-68505406 | None:intergenic |
| AAAGAAACACTTTCATACAG+AGG | 0.645850 | 1.3:+68505072 | MS.gene49173:CDS |
| GTGACAGATGATTGATGAGG+GGG | 0.646113 | 1.3:-68505257 | None:intergenic |
| GATACACTTTACCTGAACAA+TGG | 0.646902 | 1.3:-68504358 | None:intergenic |
| ACTAATACTGCACTCCACAC+AGG | 0.658063 | 1.3:-68505468 | None:intergenic |
| AGTTTGTGCCCCGATATGGG+AGG | 0.660955 | 1.3:+68505398 | MS.gene49173:CDS |
| ACCATGCCAAGAAATACAAG+TGG | 0.664668 | 1.3:-68505540 | None:intergenic |
| TTTGTGACAGATGATTGATG+AGG | 0.665764 | 1.3:-68505260 | None:intergenic |
| GGCAATGGCCCTCTATGCGG+TGG | 0.674602 | 1.3:+68505368 | MS.gene49173:CDS |
| TGTGGCAATGGCCCTCTATG+CGG | 0.679210 | 1.3:+68505365 | MS.gene49173:CDS |
| TAACCAGGTACATGCCTGTG+TGG | 0.679736 | 1.3:+68505454 | MS.gene49173:CDS |
| ACCAAAACGAGCAAATCCAG+AGG | 0.683578 | 1.3:-68504999 | None:intergenic |
| CATTGTAGCACGAGACCCTG+TGG | 0.699488 | 1.3:+68505347 | MS.gene49173:CDS |
| GAGTGAAGAAGAAATTGTGG+TGG | 0.705156 | 1.3:-68501648 | None:intergenic |
| TGTGACAGATGATTGATGAG+GGG | 0.717590 | 1.3:-68505258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTTTTTTTTTGCT+GGG | - | chr1.3:68501870-68501889 | None:intergenic | 10.0% |
| !!! | TTTTATTTATTATTTGGTTT+TGG | + | chr1.3:68501893-68501912 | MS.gene49173:intron | 10.0% |
| !! | TAGAAGAGTTAAATAAAAAT+GGG | + | chr1.3:68503984-68504003 | MS.gene49173:intron | 15.0% |
| !! | TAGAATAATGAAAATGAATT+TGG | - | chr1.3:68503828-68503847 | None:intergenic | 15.0% |
| !!! | CAATATTTTTTTTTTTTTGC+TGG | - | chr1.3:68501871-68501890 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTAAATTCAAG+TGG | + | chr1.3:68504805-68504824 | MS.gene49173:intron | 15.0% |
| !! | AAAAAATATATGTTTGTGCA+TGG | - | chr1.3:68504923-68504942 | None:intergenic | 20.0% |
| !! | AATCTGAAAATTGAAAATAC+AGG | - | chr1.3:68503512-68503531 | None:intergenic | 20.0% |
| !! | ACATTACAAGATGTATAAAA+TGG | - | chr1.3:68503082-68503101 | None:intergenic | 20.0% |
| !! | AGAAGAGTTAAATAAAAATG+GGG | + | chr1.3:68503985-68504004 | MS.gene49173:intron | 20.0% |
| !! | CAATTCTTAAGATTGTATTA+TGG | - | chr1.3:68502790-68502809 | None:intergenic | 20.0% |
| !! | CTAGAAGAGTTAAATAAAAA+TGG | + | chr1.3:68503983-68504002 | MS.gene49173:intron | 20.0% |
| !! | TATAATAAAACCAAATCTCA+AGG | + | chr1.3:68504086-68504105 | MS.gene49173:intron | 20.0% |
| !! | TGTTTAGAGATTTAATTGAA+TGG | + | chr1.3:68501929-68501948 | MS.gene49173:intron | 20.0% |
| !! | TTCATGGATATTATAATAGT+TGG | + | chr1.3:68502265-68502284 | MS.gene49173:intron | 20.0% |
| !!! | AATAGTTGGTATAATAAACT+AGG | + | chr1.3:68502279-68502298 | MS.gene49173:intron | 20.0% |
| !!! | AATCTTCCAAATATTTTCAT+CGG | - | chr1.3:68502853-68502872 | None:intergenic | 20.0% |
| !!! | AGTTAAACTAAGTTTTTGTT+AGG | + | chr1.3:68503238-68503257 | MS.gene49173:intron | 20.0% |
| !!! | ATATTTTCTTTGACATATTG+TGG | + | chr1.3:68502896-68502915 | MS.gene49173:intron | 20.0% |
| !!! | GATAAACTCTAGAATTTATA+TGG | + | chr1.3:68504045-68504064 | MS.gene49173:intron | 20.0% |
| !!! | GCAATTTTTATTATTGAAAC+TGG | - | chr1.3:68504680-68504699 | None:intergenic | 20.0% |
| !!! | TAAGTTTTTGTTAGGATATA+GGG | + | chr1.3:68503246-68503265 | MS.gene49173:intron | 20.0% |
| !!! | TTTTCAACTGTATAGATAAT+TGG | + | chr1.3:68503778-68503797 | MS.gene49173:intron | 20.0% |
| !!! | TTTTTGATTTGAACTAATCT+TGG | + | chr1.3:68502034-68502053 | MS.gene49173:intron | 20.0% |
| ! | AAAAAGCAAACTTGAAGAAA+TGG | - | chr1.3:68501836-68501855 | None:intergenic | 25.0% |
| ! | AAAAGCAAACTTGAAGAAAT+GGG | - | chr1.3:68501835-68501854 | None:intergenic | 25.0% |
| ! | AACATGATTTCATAGAAAGA+GGG | - | chr1.3:68503705-68503724 | None:intergenic | 25.0% |
| ! | AACTGTATAGATAATTGGTA+TGG | + | chr1.3:68503783-68503802 | MS.gene49173:intron | 25.0% |
| ! | AAGACTTGAAGAAAAAAGAT+TGG | + | chr1.3:68502194-68502213 | MS.gene49173:CDS | 25.0% |
| ! | ATTGAAACCTTCAGTATAAT+AGG | + | chr1.3:68503529-68503548 | MS.gene49173:intron | 25.0% |
| ! | ATTTATATGAAACATAGGAG+TGG | - | chr1.3:68504487-68504506 | None:intergenic | 25.0% |
| ! | CAAAGTTTGTAGTTTAACAA+TGG | + | chr1.3:68504225-68504244 | MS.gene49173:intron | 25.0% |
| ! | CTTAGACAAATAATGATTTG+TGG | + | chr1.3:68504633-68504652 | MS.gene49173:intron | 25.0% |
| ! | GAAAAGTTGTATAATCATCT+CGG | - | chr1.3:68504564-68504583 | None:intergenic | 25.0% |
| ! | GATATACAAAGTGATAAGAA+AGG | - | chr1.3:68504383-68504402 | None:intergenic | 25.0% |
| ! | GATTTACCAGAAAGAAAATA+GGG | - | chr1.3:68504586-68504605 | None:intergenic | 25.0% |
| ! | TAACATGATTTCATAGAAAG+AGG | - | chr1.3:68503706-68503725 | None:intergenic | 25.0% |
| ! | TAAGAACGGTATTTATAATC+TGG | - | chr1.3:68504302-68504321 | None:intergenic | 25.0% |
| ! | TAGAGATTTAATTGAATGGT+GGG | + | chr1.3:68501933-68501952 | MS.gene49173:intron | 25.0% |
| ! | TGGACATTTATATGAAACAT+AGG | - | chr1.3:68504492-68504511 | None:intergenic | 25.0% |
| ! | TTAGAGATTTAATTGAATGG+TGG | + | chr1.3:68501932-68501951 | MS.gene49173:intron | 25.0% |
| ! | TTGAAACCTTCAGTATAATA+GGG | + | chr1.3:68503530-68503549 | MS.gene49173:intron | 25.0% |
| ! | TTTAATGAAATCACGATGTT+AGG | + | chr1.3:68504943-68504962 | MS.gene49173:intron | 25.0% |
| !! | CTAAGTTTTTGTTAGGATAT+AGG | + | chr1.3:68503245-68503264 | MS.gene49173:intron | 25.0% |
| !!! | GTAATTACTTTTGTGATCAT+TGG | + | chr1.3:68502407-68502426 | MS.gene49173:intron | 25.0% |
| !!! | TATATGGCTTTTGCTTTAAA+GGG | + | chr1.3:68502329-68502348 | MS.gene49173:intron | 25.0% |
| !!! | TCTTTTTTCTTCAAGTCTTT+CGG | - | chr1.3:68502193-68502212 | None:intergenic | 25.0% |
| !!! | TTCATTATTCTAGTTTCAAC+TGG | + | chr1.3:68503836-68503855 | MS.gene49173:intron | 25.0% |
| !!! | TTTAGTAGTTGATTTGACAA+GGG | + | chr1.3:68504863-68504882 | MS.gene49173:intron | 25.0% |
| !!! | TTTTAGTAGTTGATTTGACA+AGG | + | chr1.3:68504862-68504881 | MS.gene49173:intron | 25.0% |
| AAACTATGCAACAACATTGA+TGG | - | chr1.3:68505603-68505622 | None:intergenic | 30.0% | |
| AAAGAAACACTTTCATACAG+AGG | + | chr1.3:68505072-68505091 | MS.gene49173:CDS | 30.0% | |
| AATCAAATTTGTCAGTCTAG+AGG | + | chr1.3:68503411-68503430 | MS.gene49173:intron | 30.0% | |
| AATCCATTGCTAATATGGAA+AGG | - | chr1.3:68503186-68503205 | None:intergenic | 30.0% | |
| AATCTCAAGGACCTAAATAT+TGG | + | chr1.3:68504099-68504118 | MS.gene49173:intron | 30.0% | |
| AATGAGTGATGTGTAAATGT+AGG | + | chr1.3:68502477-68502496 | MS.gene49173:intron | 30.0% | |
| AGATGTATAAAATGGTGATC+CGG | - | chr1.3:68503074-68503093 | None:intergenic | 30.0% | |
| AGGGAATGCTTTGTATAAAT+AGG | + | chr1.3:68503569-68503588 | MS.gene49173:intron | 30.0% | |
| AGTTAAGTAGTTAAACTCAG+AGG | + | chr1.3:68503271-68503290 | MS.gene49173:intron | 30.0% | |
| ATATTTAGGTCCTTGAGATT+TGG | - | chr1.3:68504099-68504118 | None:intergenic | 30.0% | |
| ATCCATTGCTAATATGGAAA+GGG | - | chr1.3:68503185-68503204 | None:intergenic | 30.0% | |
| ATCTATGCTTCAAGTATGTT+CGG | + | chr1.3:68504415-68504434 | MS.gene49173:intron | 30.0% | |
| ATGTATACTCTCATGTTTCA+TGG | + | chr1.3:68502249-68502268 | MS.gene49173:intron | 30.0% | |
| ATGTGTAAGAAAAGGAGAAA+GGG | - | chr1.3:68501803-68501822 | None:intergenic | 30.0% | |
| ATGTGTCCGATGAAAATATT+TGG | + | chr1.3:68502844-68502863 | MS.gene49173:intron | 30.0% | |
| ATTGGGTGCTTATTCAATAT+CGG | + | chr1.3:68502438-68502457 | MS.gene49173:intron | 30.0% | |
| CAAGATTCAGTCAAGTTTAA+AGG | + | chr1.3:68502160-68502179 | MS.gene49173:CDS | 30.0% | |
| CAATTTCCAATTCTTTGTCT+GGG | + | chr1.3:68503745-68503764 | MS.gene49173:intron | 30.0% | |
| CACAAATGAACCTAAATTTG+TGG | + | chr1.3:68505277-68505296 | MS.gene49173:CDS | 30.0% | |
| CGATTTACCAGAAAGAAAAT+AGG | - | chr1.3:68504587-68504606 | None:intergenic | 30.0% | |
| GGTTCAAATTTGAACTCAAA+GGG | + | chr1.3:68505196-68505215 | MS.gene49173:CDS | 30.0% | |
| GTCATTGCTTATACAAACTT+TGG | - | chr1.3:68502730-68502749 | None:intergenic | 30.0% | |
| GTTAAGTAGTTAAACTCAGA+GGG | + | chr1.3:68503272-68503291 | MS.gene49173:intron | 30.0% | |
| TAGTAGATAAGGTGAATGAT+TGG | - | chr1.3:68501760-68501779 | None:intergenic | 30.0% | |
| TATGTGTAAGAAAAGGAGAA+AGG | - | chr1.3:68501804-68501823 | None:intergenic | 30.0% | |
| TCAATTTCCAATTCTTTGTC+TGG | + | chr1.3:68503744-68503763 | MS.gene49173:intron | 30.0% | |
| TGAAACCTTCAGTATAATAG+GGG | + | chr1.3:68503531-68503550 | MS.gene49173:intron | 30.0% | |
| TGGCAAATATGTGTAAGAAA+AGG | - | chr1.3:68501811-68501830 | None:intergenic | 30.0% | |
| TGGTTCAAATTTGAACTCAA+AGG | + | chr1.3:68505195-68505214 | MS.gene49173:CDS | 30.0% | |
| TTACTATGACATGACTTAGT+GGG | + | chr1.3:68502375-68502394 | MS.gene49173:intron | 30.0% | |
| TTATTGCAATATGTGTAGCA+AGG | + | chr1.3:68502970-68502989 | MS.gene49173:intron | 30.0% | |
| TTGCTATGTCTCTTAGTATA+TGG | + | chr1.3:68502313-68502332 | MS.gene49173:intron | 30.0% | |
| TTTCCATATTAGCAATGGAT+TGG | + | chr1.3:68503185-68503204 | MS.gene49173:intron | 30.0% | |
| ! | AAACATATTTAGAGTGTGTC+GGG | + | chr1.3:68504248-68504267 | MS.gene49173:intron | 30.0% |
| ! | ACTTAGTTTAACTTTAACCG+TGG | - | chr1.3:68503231-68503250 | None:intergenic | 30.0% |
| ! | ACTTTTCCCTATTTTCTTTC+TGG | + | chr1.3:68504577-68504596 | MS.gene49173:intron | 30.0% |
| ! | GAAACATATTTAGAGTGTGT+CGG | + | chr1.3:68504247-68504266 | MS.gene49173:intron | 30.0% |
| ! | GTATATGGCTTTTGCTTTAA+AGG | + | chr1.3:68502328-68502347 | MS.gene49173:intron | 30.0% |
| !! | TTAACCGTGGCTTTAAAATT+AGG | - | chr1.3:68503218-68503237 | None:intergenic | 30.0% |
| !! | TTACTTTTGTGATCATTGGT+TGG | + | chr1.3:68502411-68502430 | MS.gene49173:intron | 30.0% |
| !!! | AAGCATTTTTTCCATCAGAA+TGG | - | chr1.3:68502944-68502963 | None:intergenic | 30.0% |
| !!! | ATATGGCTTTTGCTTTAAAG+GGG | + | chr1.3:68502330-68502349 | MS.gene49173:intron | 30.0% |
| !!! | CTTTCCTAATTTTAAAGCCA+CGG | + | chr1.3:68503211-68503230 | MS.gene49173:intron | 30.0% |
| !!! | TCGTTTTTTCATTCCAGAAA+TGG | + | chr1.3:68502062-68502081 | MS.gene49173:intron | 30.0% |
| AACACAAAACTCTCCATTTC+TGG | - | chr1.3:68502078-68502097 | None:intergenic | 35.0% | |
| AAGAAGAGGAAGAATTGTGA+CGG | - | chr1.3:68501691-68501710 | None:intergenic | 35.0% | |
| AATGGCATGTCAAATTTGTC+TGG | - | chr1.3:68503106-68503125 | None:intergenic | 35.0% | |
| AATTTGAACTCAAAGGGAAG+TGG | + | chr1.3:68505202-68505221 | MS.gene49173:CDS | 35.0% | |
| ACAATTCTTCCTCTTCTTCT+AGG | + | chr1.3:68501693-68501712 | MS.gene49173:CDS | 35.0% | |
| ACATTGAGTAAATTGAGCAG+GGG | + | chr1.3:68503351-68503370 | MS.gene49173:intron | 35.0% | |
| ACATTTATCCCAACAGAAAC+AGG | - | chr1.3:68504527-68504546 | None:intergenic | 35.0% | |
| ACCTTTACTACTTTCAGACA+CGG | + | chr1.3:68503475-68503494 | MS.gene49173:intron | 35.0% | |
| AGACATTGAGTAAATTGAGC+AGG | + | chr1.3:68503349-68503368 | MS.gene49173:intron | 35.0% | |
| AGTGACTCTATTGTAGAAGA+GGG | + | chr1.3:68503648-68503667 | MS.gene49173:intron | 35.0% | |
| ATACAAACTTTGGCACAACA+GGG | - | chr1.3:68502720-68502739 | None:intergenic | 35.0% | |
| CAATGTTGTTGCATAGTTTG+TGG | + | chr1.3:68505604-68505623 | MS.gene49173:CDS | 35.0% | |
| CAATTCTTCCTCTTCTTCTA+GGG | + | chr1.3:68501694-68501713 | MS.gene49173:CDS | 35.0% | |
| CATAGGAGTGGACATTTATA+CGG | - | chr1.3:68504475-68504494 | None:intergenic | 35.0% | |
| CTGAATGTTAAAATGTGCGA+AGG | - | chr1.3:68505511-68505530 | None:intergenic | 35.0% | |
| GAACCAATCCATTGCTAATA+TGG | - | chr1.3:68503191-68503210 | None:intergenic | 35.0% | |
| GACATTGAGTAAATTGAGCA+GGG | + | chr1.3:68503350-68503369 | MS.gene49173:intron | 35.0% | |
| GATACACTTTACCTGAACAA+TGG | - | chr1.3:68504361-68504380 | None:intergenic | 35.0% | |
| GGGCATATTATTGCAAATCA+AGG | + | chr1.3:68503387-68503406 | MS.gene49173:intron | 35.0% | |
| GTTACGTACGTTAGTAGATA+AGG | - | chr1.3:68501771-68501790 | None:intergenic | 35.0% | |
| GTTACTATGACATGACTTAG+TGG | + | chr1.3:68502374-68502393 | MS.gene49173:intron | 35.0% | |
| GTTATCTTAGTCCATTCTGA+TGG | + | chr1.3:68502930-68502949 | MS.gene49173:intron | 35.0% | |
| TAACTCTAACCACTATGACA+AGG | - | chr1.3:68502358-68502377 | None:intergenic | 35.0% | |
| TAGATACCCAGACAAAGAAT+TGG | - | chr1.3:68503754-68503773 | None:intergenic | 35.0% | |
| TAGGAGAAATTTGAGTAGAG+AGG | + | chr1.3:68503588-68503607 | MS.gene49173:intron | 35.0% | |
| TATAATCATCTCGGTTGTCA+AGG | - | chr1.3:68504555-68504574 | None:intergenic | 35.0% | |
| TATACAAACTTTGGCACAAC+AGG | - | chr1.3:68502721-68502740 | None:intergenic | 35.0% | |
| TATATGTTTGTGCATGGAAC+AGG | - | chr1.3:68504917-68504936 | None:intergenic | 35.0% | |
| TCAGAATGTCAAATAGCTCA+TGG | - | chr1.3:68502876-68502895 | None:intergenic | 35.0% | |
| TCAGAGTCATTACTTTCTGA+TGG | - | chr1.3:68502118-68502137 | None:intergenic | 35.0% | |
| TCCATTGCTAATATGGAAAG+GGG | - | chr1.3:68503184-68503203 | None:intergenic | 35.0% | |
| TCCCTGGAATAAAATCAGAA+TGG | - | chr1.3:68503124-68503143 | None:intergenic | 35.0% | |
| TCTTCAATATGCTCCAGTTA+CGG | + | chr1.3:68505305-68505324 | MS.gene49173:CDS | 35.0% | |
| TCTTCTTTGTTCATTCTCAC+AGG | - | chr1.3:68503899-68503918 | None:intergenic | 35.0% | |
| TGTATAAGCAATGACTGAGT+GGG | + | chr1.3:68502735-68502754 | MS.gene49173:intron | 35.0% | |
| TGTTAGGAAGCAAACTAAGT+CGG | + | chr1.3:68504959-68504978 | MS.gene49173:intron | 35.0% | |
| TTCATAGAAAGAGGGAGAAT+AGG | - | chr1.3:68503697-68503716 | None:intergenic | 35.0% | |
| TTGTATAAGCAATGACTGAG+TGG | + | chr1.3:68502734-68502753 | MS.gene49173:intron | 35.0% | |
| TTGTGACAGATGATTGATGA+GGG | - | chr1.3:68505262-68505281 | None:intergenic | 35.0% | |
| TTTGTGACAGATGATTGATG+AGG | - | chr1.3:68505263-68505282 | None:intergenic | 35.0% | |
| ! | AAAATGGAGCTCCCTTATTT+GGG | - | chr1.3:68502516-68502535 | None:intergenic | 35.0% |
| ! | GCCATTCTGATTTTATTCCA+GGG | + | chr1.3:68503120-68503139 | MS.gene49173:intron | 35.0% |
| ! | TGCCATTCTGATTTTATTCC+AGG | + | chr1.3:68503119-68503138 | MS.gene49173:intron | 35.0% |
| ! | TGTTTCTGTTGGGATAAATG+TGG | + | chr1.3:68504526-68504545 | MS.gene49173:intron | 35.0% |
| !! | ATCTCTAAGAGCATCCAAAA+TGG | - | chr1.3:68502532-68502551 | None:intergenic | 35.0% |
| !! | CGTGGCTTTAAAATTAGGAA+AGG | - | chr1.3:68503213-68503232 | None:intergenic | 35.0% |
| !! | TCGCACATTTTAACATTCAG+AGG | + | chr1.3:68505511-68505530 | MS.gene49173:CDS | 35.0% |
| AAATTTGTCAGTCTAGAGGC+TGG | + | chr1.3:68503415-68503434 | MS.gene49173:intron | 40.0% | |
| AACACAATCTCCTCCCATAT+CGG | - | chr1.3:68505411-68505430 | None:intergenic | 40.0% | |
| AAGTGAAACCCTAGAAGAAG+AGG | - | chr1.3:68501705-68501724 | None:intergenic | 40.0% | |
| ACCATGCCAAGAAATACAAG+TGG | - | chr1.3:68505543-68505562 | None:intergenic | 40.0% | |
| ACTGGAGCATATTGAAGAAC+AGG | - | chr1.3:68505303-68505322 | None:intergenic | 40.0% | |
| AGGAAAGGAACAGACTCAAA+GGG | - | chr1.3:68502618-68502637 | None:intergenic | 40.0% | |
| AGTGGACATTTATACGGTGA+AGG | - | chr1.3:68504469-68504488 | None:intergenic | 40.0% | |
| ATGTGAGGTCAGTTGTTAGT+TGG | + | chr1.3:68501962-68501981 | MS.gene49173:intron | 40.0% | |
| ATTGTAGAAGAGGGAACTCT+TGG | + | chr1.3:68503657-68503676 | MS.gene49173:intron | 40.0% | |
| CAAAATGGAGCTCCCTTATT+TGG | - | chr1.3:68502517-68502536 | None:intergenic | 40.0% | |
| CAGTGACTCTATTGTAGAAG+AGG | + | chr1.3:68503647-68503666 | MS.gene49173:intron | 40.0% | |
| CCACTTATGCACCCAAATAA+GGG | + | chr1.3:68502502-68502521 | MS.gene49173:intron | 40.0% | |
| CCTGCTGTGTAAGCTAAAAA+CGG | - | chr1.3:68505045-68505064 | None:intergenic | 40.0% | |
| CTCTTCTACAATAGAGTCAC+TGG | - | chr1.3:68503649-68503668 | None:intergenic | 40.0% | |
| GAAGAACAGGCCACAAATTT+AGG | - | chr1.3:68505290-68505309 | None:intergenic | 40.0% | |
| GAGTGAAGAAGAAATTGTGG+TGG | - | chr1.3:68501651-68501670 | None:intergenic | 40.0% | |
| GATAAGGTGAATGATTGGAG+TGG | - | chr1.3:68501755-68501774 | None:intergenic | 40.0% | |
| GCATGTACCTGGTTAAAGAT+GGG | - | chr1.3:68505449-68505468 | None:intergenic | 40.0% | |
| GTATAAGCAATGACTGAGTG+GGG | + | chr1.3:68502736-68502755 | MS.gene49173:intron | 40.0% | |
| GTATTTCTTGGCATGGTGAT+GGG | + | chr1.3:68505546-68505565 | MS.gene49173:CDS | 40.0% | |
| GTGGACATTTATACGGTGAA+GGG | - | chr1.3:68504468-68504487 | None:intergenic | 40.0% | |
| GTGTGGACACACCAATATTT+AGG | - | chr1.3:68504113-68504132 | None:intergenic | 40.0% | |
| GTTAGGAAGCAAACTAAGTC+GGG | + | chr1.3:68504960-68504979 | MS.gene49173:intron | 40.0% | |
| TAGGAAAGGAACAGACTCAA+AGG | - | chr1.3:68502619-68502638 | None:intergenic | 40.0% | |
| TCAAGAGACTGTACAATGCT+TGG | - | chr1.3:68505098-68505117 | None:intergenic | 40.0% | |
| TCCCCTTTCCATATTAGCAA+TGG | + | chr1.3:68503180-68503199 | MS.gene49173:intron | 40.0% | |
| TCCGTGTCTGAAAGTAGTAA+AGG | - | chr1.3:68503479-68503498 | None:intergenic | 40.0% | |
| TGAAGAAGAAATTGTGGTGG+TGG | - | chr1.3:68501648-68501667 | None:intergenic | 40.0% | |
| TGGACATTTATACGGTGAAG+GGG | - | chr1.3:68504467-68504486 | None:intergenic | 40.0% | |
| TGTATTTCTTGGCATGGTGA+TGG | + | chr1.3:68505545-68505564 | MS.gene49173:CDS | 40.0% | |
| TGTGACAGATGATTGATGAG+GGG | - | chr1.3:68505261-68505280 | None:intergenic | 40.0% | |
| TTGGCTTACTGCTCTTTACA+CGG | + | chr1.3:68502213-68502232 | MS.gene49173:CDS | 40.0% | |
| ! | AATGGTGGGATTGATATGTG+AGG | + | chr1.3:68501947-68501966 | MS.gene49173:intron | 40.0% |
| ! | ATGCTGCCACTTGTATTTCT+TGG | + | chr1.3:68505534-68505553 | MS.gene49173:CDS | 40.0% |
| ! | CAAATAAGGGAGCTCCATTT+TGG | + | chr1.3:68502515-68502534 | MS.gene49173:intron | 40.0% |
| ! | CCTTATTTGGGTGCATAAGT+GGG | - | chr1.3:68502504-68502523 | None:intergenic | 40.0% |
| ! | GATCATTGGTTGGAGGAATT+GGG | + | chr1.3:68502421-68502440 | MS.gene49173:intron | 40.0% |
| ! | GCAACAACATTGATGGTAAG+AGG | - | chr1.3:68505596-68505615 | None:intergenic | 40.0% |
| ! | TGATCATTGGTTGGAGGAAT+TGG | + | chr1.3:68502420-68502439 | MS.gene49173:intron | 40.0% |
| ! | TGATGGGTGCTGTATTTGTA+CGG | + | chr1.3:68505562-68505581 | MS.gene49173:CDS | 40.0% |
| !! | AGGAAGAATTGTGACGGATT+GGG | - | chr1.3:68501685-68501704 | None:intergenic | 40.0% |
| !! | CTTTTGTGATCATTGGTTGG+AGG | + | chr1.3:68502414-68502433 | MS.gene49173:intron | 40.0% |
| !! | GCAGATTGCTGTTTGATAGT+TGG | - | chr1.3:68504182-68504201 | None:intergenic | 40.0% |
| !!! | ATTTGCTCGTTTTGGTTGGT+AGG | + | chr1.3:68505006-68505025 | MS.gene49173:CDS | 40.0% |
| !!! | CGTTTTTAGCTTACACAGCA+GGG | + | chr1.3:68505043-68505062 | MS.gene49173:CDS | 40.0% |
| AAAAGGAGAAAGGGAGAGAG+TGG | - | chr1.3:68501794-68501813 | None:intergenic | 45.0% | |
| AAAGGAGAAAGGGAGAGAGT+GGG | - | chr1.3:68501793-68501812 | None:intergenic | 45.0% | |
| AAGAACCTGTAGTTGCGTTC+GGG | + | chr1.3:68503152-68503171 | MS.gene49173:intron | 45.0% | |
| ACACAATCTCCTCCCATATC+GGG | - | chr1.3:68505410-68505429 | None:intergenic | 45.0% | |
| ACCAAAACGAGCAAATCCAG+AGG | - | chr1.3:68505002-68505021 | None:intergenic | 45.0% | |
| ACCTGGTTAAAGATGGGAGA+AGG | - | chr1.3:68505443-68505462 | None:intergenic | 45.0% | |
| ACTAATACTGCACTCCACAC+AGG | - | chr1.3:68505471-68505490 | None:intergenic | 45.0% | |
| ATCCCAACAGAAACAGGAAG+AGG | - | chr1.3:68504521-68504540 | None:intergenic | 45.0% | |
| ATGTTCGGTACTTCCGATTG+TGG | + | chr1.3:68504430-68504449 | MS.gene49173:intron | 45.0% | |
| CACTGCCCCTATTATACTGA+AGG | - | chr1.3:68503539-68503558 | None:intergenic | 45.0% | |
| CAGTATAATAGGGGCAGTGA+AGG | + | chr1.3:68503540-68503559 | MS.gene49173:intron | 45.0% | |
| CATTTATACGGTGAAGGGGT+AGG | - | chr1.3:68504463-68504482 | None:intergenic | 45.0% | |
| CCAGGGTTCAACACTAAGAA+CGG | - | chr1.3:68504316-68504335 | None:intergenic | 45.0% | |
| CCCACTTATGCACCCAAATA+AGG | + | chr1.3:68502501-68502520 | MS.gene49173:intron | 45.0% | |
| GAAACAGGAAGAGGCAAGAA+TGG | - | chr1.3:68504512-68504531 | None:intergenic | 45.0% | |
| GAAGAACCTGTAGTTGCGTT+CGG | + | chr1.3:68503151-68503170 | MS.gene49173:intron | 45.0% | |
| GCAAACTTGAAGAAATGGGC+TGG | - | chr1.3:68501831-68501850 | None:intergenic | 45.0% | |
| GCAATGGAAGAGTCTAGGAA+AGG | - | chr1.3:68502633-68502652 | None:intergenic | 45.0% | |
| GCCACTTGTATTTCTTGGCA+TGG | + | chr1.3:68505539-68505558 | MS.gene49173:CDS | 45.0% | |
| GGCATGTACCTGGTTAAAGA+TGG | - | chr1.3:68505450-68505469 | None:intergenic | 45.0% | |
| GGGGAGTGAAGAAGAAATTG+TGG | - | chr1.3:68501654-68501673 | None:intergenic | 45.0% | |
| GGTAGGAAGGAATCCACAAT+CGG | - | chr1.3:68504446-68504465 | None:intergenic | 45.0% | |
| GTGACAGATGATTGATGAGG+GGG | - | chr1.3:68505260-68505279 | None:intergenic | 45.0% | |
| GTGCTGTATTTGTACGGTCT+AGG | + | chr1.3:68505568-68505587 | MS.gene49173:CDS | 45.0% | |
| GTGTAGCAAGGATGTAATCG+TGG | + | chr1.3:68502982-68503001 | MS.gene49173:intron | 45.0% | |
| TACTTCATCGCTGTCTTGCA+AGG | + | chr1.3:68505151-68505170 | MS.gene49173:CDS | 45.0% | |
| TAGAAGAGGGAACTCTTGGA+GGG | + | chr1.3:68503661-68503680 | MS.gene49173:intron | 45.0% | |
| TCCTTCTCCCATCTTTAACC+AGG | + | chr1.3:68505439-68505458 | MS.gene49173:CDS | 45.0% | |
| TGAAACTACCACCGCATAGA+GGG | - | chr1.3:68505379-68505398 | None:intergenic | 45.0% | |
| TGCTATCCCAACCATACCTT+CGG | - | chr1.3:68505130-68505149 | None:intergenic | 45.0% | |
| TTAAACCACTCTCGTCTGAC+TGG | + | chr1.3:68505175-68505194 | MS.gene49173:CDS | 45.0% | |
| TTCAGTTTGTGCCCCGATAT+GGG | + | chr1.3:68505395-68505414 | MS.gene49173:CDS | 45.0% | |
| TTCCTAGACTCTTCCATTGC+AGG | + | chr1.3:68502633-68502652 | MS.gene49173:intron | 45.0% | |
| TTGAACCCTGGAAAGTTCCT+TGG | + | chr1.3:68504325-68504344 | MS.gene49173:CDS | 45.0% | |
| TTTCAGTTTGTGCCCCGATA+TGG | + | chr1.3:68505394-68505413 | MS.gene49173:CDS | 45.0% | |
| ! | ATGTTGCCGAAGGTATGGTT+GGG | + | chr1.3:68505121-68505140 | MS.gene49173:CDS | 45.0% |
| ! | CCCTTATTTGGGTGCATAAG+TGG | - | chr1.3:68502505-68502524 | None:intergenic | 45.0% |
| ! | CTGATCTAGAACTCCTGCAA+TGG | - | chr1.3:68502649-68502668 | None:intergenic | 45.0% |
| !! | CTGGATTTGCTCGTTTTGGT+TGG | + | chr1.3:68505002-68505021 | MS.gene49173:CDS | 45.0% |
| !! | GAGGAAGAATTGTGACGGAT+TGG | - | chr1.3:68501686-68501705 | None:intergenic | 45.0% |
| !! | TCCTCTGGATTTGCTCGTTT+TGG | + | chr1.3:68504998-68505017 | MS.gene49173:CDS | 45.0% |
| !! | TGCCTCTTCCTGTTTCTGTT+GGG | + | chr1.3:68504516-68504535 | MS.gene49173:intron | 45.0% |
| !! | TGGCAGTTTGATGTCGGTTT+GGG | + | chr1.3:68505222-68505241 | MS.gene49173:CDS | 45.0% |
| !! | TTGCCTCTTCCTGTTTCTGT+TGG | + | chr1.3:68504515-68504534 | MS.gene49173:intron | 45.0% |
| !!! | CCGTTTTTAGCTTACACAGC+AGG | + | chr1.3:68505042-68505061 | MS.gene49173:CDS | 45.0% |
| !!! | CGTTTTGGTTGGTAGGTTCT+TGG | + | chr1.3:68505013-68505032 | MS.gene49173:CDS | 45.0% |
| !!! | ATTGTTTTTTATTTATTATT+TGG | + | chr1.3:68501887-68501906 | MS.gene49173:intron | 5.0% |
| ACAATGGTCTTTGCCGTCCA+AGG | - | chr1.3:68504345-68504364 | None:intergenic | 50.0% | |
| ACCCTGGAAAGTTCCTTGGA+CGG | + | chr1.3:68504329-68504348 | MS.gene49173:CDS | 50.0% | |
| AGAAGAGGGAACTCTTGGAG+GGG | + | chr1.3:68503662-68503681 | MS.gene49173:intron | 50.0% | |
| AGCAGGGGTTCTGTTGTAGA+AGG | + | chr1.3:68503366-68503385 | MS.gene49173:intron | 50.0% | |
| AGGGGCAGTGAAGGAGTTAA+AGG | + | chr1.3:68503549-68503568 | MS.gene49173:intron | 50.0% | |
| AGGTTCTTCAGATGCTTCCC+TGG | - | chr1.3:68503140-68503159 | None:intergenic | 50.0% | |
| ATCCGGTAGACACAGCAGAT+GGG | - | chr1.3:68503057-68503076 | None:intergenic | 50.0% | |
| ATGAACCCGAACGCAACTAC+AGG | - | chr1.3:68503160-68503179 | None:intergenic | 50.0% | |
| CAAACTAAGTCGGGTTCTGC+AGG | + | chr1.3:68504969-68504988 | MS.gene49173:intron | 50.0% | |
| CACAATCTCCTCCCATATCG+GGG | - | chr1.3:68505409-68505428 | None:intergenic | 50.0% | |
| CTCCTGCAATGGAAGAGTCT+AGG | - | chr1.3:68502638-68502657 | None:intergenic | 50.0% | |
| CTCTTGACAGATGTTGCCGA+AGG | + | chr1.3:68505111-68505130 | MS.gene49173:CDS | 50.0% | |
| CTGAAACTACCACCGCATAG+AGG | - | chr1.3:68505380-68505399 | None:intergenic | 50.0% | |
| GACAGATGTTGCCGAAGGTA+TGG | + | chr1.3:68505116-68505135 | MS.gene49173:CDS | 50.0% | |
| GACGGCAAAGACCATTGTTC+AGG | + | chr1.3:68504347-68504366 | MS.gene49173:CDS | 50.0% | |
| GATTGATGAGGGGGAACATG+AGG | - | chr1.3:68505251-68505270 | None:intergenic | 50.0% | |
| GCAGGGGTTCTGTTGTAGAA+GGG | + | chr1.3:68503367-68503386 | MS.gene49173:intron | 50.0% | |
| GGAAAGCGAGAAGAGGTAGT+TGG | - | chr1.3:68501734-68501753 | None:intergenic | 50.0% | |
| GGGAAGTGGCAGTTTGATGT+CGG | + | chr1.3:68505216-68505235 | MS.gene49173:CDS | 50.0% | |
| GGGGCAGTGAAGGAGTTAAA+GGG | + | chr1.3:68503550-68503569 | MS.gene49173:intron | 50.0% | |
| GTAGAAGAGGGAACTCTTGG+AGG | + | chr1.3:68503660-68503679 | MS.gene49173:intron | 50.0% | |
| GTAGACACAGCAGATGGGTA+AGG | - | chr1.3:68503052-68503071 | None:intergenic | 50.0% | |
| TAACCAGGTACATGCCTGTG+TGG | + | chr1.3:68505454-68505473 | MS.gene49173:CDS | 50.0% | |
| TACCCATCTGCTGTGTCTAC+CGG | + | chr1.3:68503052-68503071 | MS.gene49173:intron | 50.0% | |
| TATACGGTGAAGGGGTAGGA+AGG | - | chr1.3:68504459-68504478 | None:intergenic | 50.0% | |
| TCAACTGGCAGTCTGATGAG+AGG | + | chr1.3:68503851-68503870 | MS.gene49173:intron | 50.0% | |
| TCTACACTCGAGACCGTAAC+TGG | - | chr1.3:68505321-68505340 | None:intergenic | 50.0% | |
| TGGCACAACAGGGCAATGTT+TGG | - | chr1.3:68502710-68502729 | None:intergenic | 50.0% | |
| TGGGAGGAGATTGTGTTTCG+TGG | + | chr1.3:68505414-68505433 | MS.gene49173:CDS | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr1.3:68504128-68504147 | None:intergenic | 50.0% | |
| TTCTGCAGGTTATGCTCCTC+TGG | + | chr1.3:68504983-68505002 | MS.gene49173:intron | 50.0% | |
| TTGAACCAGTCAGACGAGAG+TGG | - | chr1.3:68505183-68505202 | None:intergenic | 50.0% | |
| TTGGAGTGGAAAGCGAGAAG+AGG | - | chr1.3:68501741-68501760 | None:intergenic | 50.0% | |
| ! | AAAGGGGAGCCTTGTCATAG+TGG | + | chr1.3:68502346-68502365 | MS.gene49173:intron | 50.0% |
| ! | CCGTTCTTAGTGTTGAACCC+TGG | + | chr1.3:68504313-68504332 | MS.gene49173:CDS | 50.0% |
| ! | GATGTTGCCGAAGGTATGGT+TGG | + | chr1.3:68505120-68505139 | MS.gene49173:CDS | 50.0% |
| ! | GTGGCAGTTTGATGTCGGTT+TGG | + | chr1.3:68505221-68505240 | MS.gene49173:CDS | 50.0% |
| !! | TGACGGATTGGGAGAGAGAA+GGG | - | chr1.3:68501674-68501693 | None:intergenic | 50.0% |
| AAGAGGGAACTCTTGGAGGG+GGG | + | chr1.3:68503664-68503683 | MS.gene49173:intron | 55.0% | |
| ACTCCACACAGGCATGTACC+TGG | - | chr1.3:68505460-68505479 | None:intergenic | 55.0% | |
| AGTTTGTGCCCCGATATGGG+AGG | + | chr1.3:68505398-68505417 | MS.gene49173:CDS | 55.0% | |
| CACAGGGTCTCGTGCTACAA+TGG | - | chr1.3:68505349-68505368 | None:intergenic | 55.0% | |
| CATAGAGGGCCATTGCCACA+GGG | - | chr1.3:68505365-68505384 | None:intergenic | 55.0% | |
| CATTGTAGCACGAGACCCTG+TGG | + | chr1.3:68505347-68505366 | MS.gene49173:CDS | 55.0% | |
| GAAGAGGGAACTCTTGGAGG+GGG | + | chr1.3:68503663-68503682 | MS.gene49173:intron | 55.0% | |
| GATCCGGTAGACACAGCAGA+TGG | - | chr1.3:68503058-68503077 | None:intergenic | 55.0% | |
| GCCGTCCAAGGAACTTTCCA+GGG | - | chr1.3:68504333-68504352 | None:intergenic | 55.0% | |
| TGCCGTCCAAGGAACTTTCC+AGG | - | chr1.3:68504334-68504353 | None:intergenic | 55.0% | |
| TGTGGCAATGGCCCTCTATG+CGG | + | chr1.3:68505365-68505384 | MS.gene49173:CDS | 55.0% | |
| !! | GACGGATTGGGAGAGAGAAG+GGG | - | chr1.3:68501673-68501692 | None:intergenic | 55.0% |
| !! | GTGACGGATTGGGAGAGAGA+AGG | - | chr1.3:68501675-68501694 | None:intergenic | 55.0% |
| AGCACGAGACCCTGTGGCAA+TGG | + | chr1.3:68505353-68505372 | MS.gene49173:CDS | 60.0% | |
| GCATAGAGGGCCATTGCCAC+AGG | - | chr1.3:68505366-68505385 | None:intergenic | 60.0% | |
| GGCAATGGCCCTCTATGCGG+TGG | + | chr1.3:68505368-68505387 | MS.gene49173:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68501641 | 68505659 | 68501641 | ID=MS.gene49173 |
| chr1.3 | mRNA | 68501641 | 68505659 | 68501641 | ID=MS.gene49173.t1;Parent=MS.gene49173 |
| chr1.3 | exon | 68501641 | 68501781 | 68501641 | ID=MS.gene49173.t1.exon1;Parent=MS.gene49173.t1 |
| chr1.3 | CDS | 68501641 | 68501781 | 68501641 | ID=cds.MS.gene49173.t1;Parent=MS.gene49173.t1 |
| chr1.3 | exon | 68502079 | 68502234 | 68502079 | ID=MS.gene49173.t1.exon2;Parent=MS.gene49173.t1 |
| chr1.3 | CDS | 68502079 | 68502234 | 68502079 | ID=cds.MS.gene49173.t1;Parent=MS.gene49173.t1 |
| chr1.3 | exon | 68504303 | 68504368 | 68504303 | ID=MS.gene49173.t1.exon3;Parent=MS.gene49173.t1 |
| chr1.3 | CDS | 68504303 | 68504368 | 68504303 | ID=cds.MS.gene49173.t1;Parent=MS.gene49173.t1 |
| chr1.3 | exon | 68504991 | 68505659 | 68504991 | ID=MS.gene49173.t1.exon4;Parent=MS.gene49173.t1 |
| chr1.3 | CDS | 68504991 | 68505659 | 68504991 | ID=cds.MS.gene49173.t1;Parent=MS.gene49173.t1 |
| Gene Sequence |
| Protein sequence |
