Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49698.t1 | XP_003630311.1 | 96 | 701 | 28 | 0 | 1 | 701 | 1 | 701 | 0.00E+00 | 1335.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49698.t1 | Q9US48 | 23.1 | 601 | 333 | 20 | 18 | 608 | 9 | 490 | 9.2e-21 | 103.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49698.t1 | G7LEX7 | 96.0 | 701 | 28 | 0 | 1 | 701 | 1 | 701 | 0.0e+00 | 1335.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49698 | MS.gene83241 | PPI |
| MS.gene49698 | MS.gene81030 | PPI |
| MS.gene49698 | MS.gene72394 | PPI |
| MS.gene49698 | MS.gene72395 | PPI |
| MS.gene49698 | MS.gene045787 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49698.t1 | MTR_8g094170 | 96.006 | 701 | 28 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1387 |
| MS.gene49698.t1 | MTR_8g094170 | 95.488 | 687 | 31 | 0 | 1 | 687 | 1 | 687 | 0.0 | 1345 |
| MS.gene49698.t1 | MTR_8g094170 | 96.100 | 641 | 25 | 0 | 61 | 701 | 1 | 641 | 0.0 | 1274 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49698.t1 | AT5G19130 | 56.250 | 704 | 278 | 7 | 4 | 700 | 15 | 695 | 0.0 | 759 |
| MS.gene49698.t1 | AT5G19130 | 56.153 | 707 | 277 | 7 | 4 | 700 | 15 | 698 | 0.0 | 758 |
Find 172 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATATTGTAAATTATT+TGG | 0.021800 | 4.4:-8126108 | MS.gene49698:CDS |
| ATGAATGACCAAAACCTTTC+TGG | 0.188726 | 4.4:+8124837 | None:intergenic |
| AGTATTGCTATTAATGAAAT+TGG | 0.189677 | 4.4:-8126293 | MS.gene49698:CDS |
| TTAAATCCTCAGTGGAAATT+TGG | 0.192617 | 4.4:-8125969 | MS.gene49698:CDS |
| GGTATTTGATATAGGAAATA+TGG | 0.198745 | 4.4:+8124787 | None:intergenic |
| GATGGAGCAGCTTCGAAAAT+TGG | 0.207135 | 4.4:+8124679 | None:intergenic |
| TCTCCTGGACCTACTTTCTT+TGG | 0.208451 | 4.4:+8126509 | None:intergenic |
| AGCTTGCTTTGTTTCGTATC+TGG | 0.220560 | 4.4:-8128272 | MS.gene49698:CDS |
| CACTTCTTTCACGGGTTACT+TGG | 0.248796 | 4.4:-8126451 | MS.gene49698:CDS |
| GGGTGGTATATTTGAATCTC+TGG | 0.260256 | 4.4:-8126009 | MS.gene49698:CDS |
| TCCAGGAGAGGCTTTATCTT+TGG | 0.263277 | 4.4:-8126495 | MS.gene49698:CDS |
| CATGATTCCATTCGCGTTAC+TGG | 0.267377 | 4.4:-8124980 | MS.gene49698:CDS |
| GTACTAATGTTGGTGATTAT+TGG | 0.269970 | 4.4:-8124378 | MS.gene49698:CDS |
| ATCAATATTGTAAATTATTT+GGG | 0.276089 | 4.4:-8126107 | MS.gene49698:CDS |
| CCTACTTTCTTTGGATTGTA+TGG | 0.283312 | 4.4:+8126518 | None:intergenic |
| TTCGTTGTTGGGGTGGAATT+AGG | 0.292753 | 4.4:+8124766 | None:intergenic |
| GCCACTTGTAATCTTGCTTT+AGG | 0.295266 | 4.4:-8124463 | MS.gene49698:CDS |
| AACTTTGCTACAGCTGAAAT+CGG | 0.303038 | 4.4:-8124571 | MS.gene49698:CDS |
| TCCAGGTGGCTTAATACTTT+GGG | 0.309916 | 4.4:-8126029 | MS.gene49698:CDS |
| CTCCAGGTGGCTTAATACTT+TGG | 0.317854 | 4.4:-8126030 | MS.gene49698:CDS |
| CCAGGAGAGGCTTTATCTTT+GGG | 0.324320 | 4.4:-8126494 | MS.gene49698:CDS |
| TATCATTCCTCCCAGGGTTT+GGG | 0.325743 | 4.4:-8125795 | MS.gene49698:intron |
| GAACTCAGCCAGAAAGGTTT+TGG | 0.326223 | 4.4:-8124845 | MS.gene49698:CDS |
| TATTCTGATAGAAATTTATA+CGG | 0.328318 | 4.4:-8126260 | MS.gene49698:CDS |
| TGGAATTAGGTATTTGATAT+AGG | 0.328975 | 4.4:+8124779 | None:intergenic |
| CAAATCATTGACGAATTTGT+TGG | 0.332404 | 4.4:+8127846 | None:intergenic |
| CGTACGATTGGGCGAATTCT+CGG | 0.337039 | 4.4:+8128436 | None:intergenic |
| CGGTGTTCTCACTTCTTTCA+CGG | 0.338719 | 4.4:-8126460 | MS.gene49698:CDS |
| ATCTTTGGGCATTGCTTACT+CGG | 0.353212 | 4.4:-8126480 | MS.gene49698:CDS |
| CGCTTGGCTAAGAGAATATC+AGG | 0.358140 | 4.4:-8126366 | MS.gene49698:CDS |
| ACACCGTGAAGTTCGTTGTT+GGG | 0.362873 | 4.4:+8124755 | None:intergenic |
| CAGGGTTTGGGTGTTCCCAC+TGG | 0.367001 | 4.4:-8125783 | MS.gene49698:CDS |
| TTGAAGTCAGCCACAAATCT+TGG | 0.373675 | 4.4:-8124876 | MS.gene49698:CDS |
| TATTAACTATGTCAGCTTCA+TGG | 0.374925 | 4.4:+8126333 | None:intergenic |
| TCACTTGGAATCAACATTGC+TGG | 0.382539 | 4.4:-8126593 | MS.gene49698:CDS |
| TTTGAGACTATACCCGAATC+AGG | 0.382697 | 4.4:+8126632 | None:intergenic |
| CTAGCCCATTCTCCTTTCTC+AGG | 0.384071 | 4.4:+8124652 | None:intergenic |
| ACGCTCAATAAACAACCTTC+TGG | 0.385074 | 4.4:-8125073 | MS.gene49698:CDS |
| TTCGCCCAATCGTACGGTTA+GGG | 0.397770 | 4.4:-8128429 | MS.gene49698:CDS |
| ACTTTGCTACAGCTGAAATC+GGG | 0.398136 | 4.4:-8124570 | MS.gene49698:CDS |
| ATTCGCCCAATCGTACGGTT+AGG | 0.400527 | 4.4:-8128430 | MS.gene49698:CDS |
| ATCTGCCCATTTGACGCCTC+AGG | 0.403801 | 4.4:+8126146 | None:intergenic |
| ACAATATCAACCGCTTTCAT+TGG | 0.407962 | 4.4:-8124616 | MS.gene49698:CDS |
| ATCTACCCTGAGGCGTCAAA+TGG | 0.408841 | 4.4:-8126152 | MS.gene49698:CDS |
| ATGTTGGTGATTATTGGAAC+TGG | 0.413859 | 4.4:-8124372 | MS.gene49698:CDS |
| GGTCGAGCCATCAGACAAAT+CGG | 0.416688 | 4.4:+8124532 | None:intergenic |
| TCTTTCACGGGTTACTTGGC+TGG | 0.419390 | 4.4:-8126447 | MS.gene49698:CDS |
| TGTTGAGGGAGCTGCTACAC+TGG | 0.425827 | 4.4:-8125928 | MS.gene49698:CDS |
| TCTCCTTTCTCAGGTTGAGA+TGG | 0.435588 | 4.4:+8124661 | None:intergenic |
| ATGTCAGCTTCATGGAATAC+AGG | 0.437070 | 4.4:+8126341 | None:intergenic |
| TCCGAAAATGCCCTTATGCC+TGG | 0.442146 | 4.4:-8128200 | MS.gene49698:intron |
| TATTTGGGAGTGCATAAAAC+AGG | 0.443229 | 4.4:-8126092 | MS.gene49698:CDS |
| GTATTTGATATAGGAAATAT+GGG | 0.444101 | 4.4:+8124788 | None:intergenic |
| CACACCGTGAAGTTCGTTGT+TGG | 0.447364 | 4.4:+8124754 | None:intergenic |
| CATTGTCCCGATTTGTCTGA+TGG | 0.447556 | 4.4:-8124539 | MS.gene49698:CDS |
| GGAACTGGGTGGAATCCCTT+TGG | 0.449066 | 4.4:-8124357 | MS.gene49698:CDS |
| CTTGTGGCTGATTCACAATA+TGG | 0.451732 | 4.4:-8126407 | MS.gene49698:CDS |
| CCCAAAGATAAAGCCTCTCC+TGG | 0.451811 | 4.4:+8126494 | None:intergenic |
| CATTGACGAATTTGTTGGCA+TGG | 0.453853 | 4.4:+8127851 | None:intergenic |
| AATATTGATGAGGTCGAGGT+TGG | 0.461354 | 4.4:+8126121 | None:intergenic |
| TCAGCCACAAATCTTGGAAA+TGG | 0.464454 | 4.4:-8124870 | MS.gene49698:CDS |
| TCAGCCATTTCCAAGATTTG+TGG | 0.465970 | 4.4:+8124866 | None:intergenic |
| TGCACAATATATGTCAGCCT+TGG | 0.467030 | 4.4:-8126726 | MS.gene49698:CDS |
| TCTGCTACTCAGTATGTTGA+GGG | 0.467592 | 4.4:-8125942 | MS.gene49698:CDS |
| TGCGTAACTAACCAGGCATA+AGG | 0.472079 | 4.4:+8128189 | None:intergenic |
| GGTGTTCCCACTGGTTCTCA+TGG | 0.474162 | 4.4:-8125774 | MS.gene49698:CDS |
| CTTCTCCTGCTAAAATGATC+AGG | 0.478884 | 4.4:-8125698 | MS.gene49698:CDS |
| TAAGTATTGTTAGCAAGTAT+AGG | 0.487108 | 4.4:+8128227 | None:intergenic |
| GCTTCCTTGCCATCACCCCT+TGG | 0.488707 | 4.4:+8126557 | None:intergenic |
| CACCCCAACAACGAACTTCA+CGG | 0.489977 | 4.4:-8124758 | MS.gene49698:CDS |
| AACATAAGCTGTTCATCACT+TGG | 0.491790 | 4.4:-8126608 | MS.gene49698:CDS |
| GATGAAACTGATTCAGTTGA+GGG | 0.494035 | 4.4:+8126675 | None:intergenic |
| ATATAGGAAATATGGGAGTA+AGG | 0.495013 | 4.4:+8124795 | None:intergenic |
| CTCAACCTGAGAAAGGAGAA+TGG | 0.500794 | 4.4:-8124657 | MS.gene49698:CDS |
| ATTACAAGTGGCCCTCAGTA+AGG | 0.503694 | 4.4:+8124474 | None:intergenic |
| CACCGTGAAGTTCGTTGTTG+GGG | 0.504468 | 4.4:+8124756 | None:intergenic |
| TTCTGCTACTCAGTATGTTG+AGG | 0.505290 | 4.4:-8125943 | MS.gene49698:CDS |
| ACGGGTTACTTGGCTGGCAA+AGG | 0.506068 | 4.4:-8126441 | MS.gene49698:CDS |
| GGCTGGCAAAGGATGTCATA+TGG | 0.506751 | 4.4:-8126430 | MS.gene49698:CDS |
| GGTGGTATATTTGAATCTCT+GGG | 0.507254 | 4.4:-8126008 | MS.gene49698:CDS |
| TCTCTCACAGTAACTATGTC+AGG | 0.508091 | 4.4:-8128396 | MS.gene49698:intron |
| AATATTCTGCCGTGTCCGCT+TGG | 0.509047 | 4.4:-8126382 | MS.gene49698:CDS |
| GCTCCATCTCAACCTGAGAA+AGG | 0.509066 | 4.4:-8124664 | MS.gene49698:CDS |
| ACTTGTTGCAGGTTGATTGA+AGG | 0.509976 | 4.4:-8125102 | MS.gene49698:intron |
| GGAAGATGTGGATTGAAGAG+TGG | 0.511976 | 4.4:+8124906 | None:intergenic |
| CATATTTACTAGAAGATGTC+AGG | 0.512707 | 4.4:+8125019 | None:intergenic |
| CGAGAATTCGCCCAATCGTA+CGG | 0.512761 | 4.4:-8128435 | MS.gene49698:CDS |
| GGTGTTCTCACTTCTTTCAC+GGG | 0.514038 | 4.4:-8126459 | MS.gene49698:CDS |
| TTCTCTTAGCCAAGCGGACA+CGG | 0.514715 | 4.4:+8126373 | None:intergenic |
| TCAACCTGAGAAAGGAGAAT+GGG | 0.515126 | 4.4:-8124656 | MS.gene49698:CDS |
| GCGTAACTAACCAGGCATAA+GGG | 0.526659 | 4.4:+8128190 | None:intergenic |
| CGTGAAGTTCGTTGTTGGGG+TGG | 0.528830 | 4.4:+8124759 | None:intergenic |
| AAAACCCTAACCGTACGATT+GGG | 0.528834 | 4.4:+8128425 | None:intergenic |
| TTACAATATTGATGAGGTCG+AGG | 0.533665 | 4.4:+8126117 | None:intergenic |
| TATTAAGACTGTCTTCATGA+TGG | 0.534636 | 4.4:+8126174 | None:intergenic |
| TGGAGAGATGCCGCAACTAT+CGG | 0.535045 | 4.4:+8124946 | None:intergenic |
| AACAACGAACTTCACGGTGT+GGG | 0.535800 | 4.4:-8124752 | MS.gene49698:CDS |
| GGTGGAAAACGACAGCGTAC+CGG | 0.537232 | 4.4:-8128467 | MS.gene49698:CDS |
| TTCTAGTAAATATGTGTCTG+TGG | 0.537634 | 4.4:-8125010 | MS.gene49698:CDS |
| ATTGACGAATTTGTTGGCAT+GGG | 0.539156 | 4.4:+8127852 | None:intergenic |
| GTATTGTTCACCTACCATGC+TGG | 0.539558 | 4.4:-8124303 | MS.gene49698:CDS |
| TGGAATTATTAGAGCACCAA+GGG | 0.540171 | 4.4:-8126573 | MS.gene49698:CDS |
| ATAAGTAACCTCGGCATCCA+AGG | 0.541033 | 4.4:+8126709 | None:intergenic |
| ATATTGATGAGGTCGAGGTT+GGG | 0.541092 | 4.4:+8126122 | None:intergenic |
| ATGGCTGAACTCAGCCAGAA+AGG | 0.542585 | 4.4:-8124851 | MS.gene49698:CDS |
| ATTAGAGCACCAAGGGGTGA+TGG | 0.544542 | 4.4:-8126566 | MS.gene49698:CDS |
| AGCACCAAGGGGTGATGGCA+AGG | 0.549825 | 4.4:-8126561 | MS.gene49698:CDS |
| TGAAGCTTGATGCTCAAGCT+AGG | 0.552441 | 4.4:-8124507 | MS.gene49698:CDS |
| GGGTGGAATCCCTTTGGACA+TGG | 0.552715 | 4.4:-8124351 | MS.gene49698:CDS |
| GGCAAGTTCAATGTATTCCC+AGG | 0.557053 | 4.4:-8125907 | MS.gene49698:intron |
| AGCACTGTTCCATGTCCAAA+GGG | 0.557411 | 4.4:+8124342 | None:intergenic |
| TCTACCCTGAGGCGTCAAAT+GGG | 0.558662 | 4.4:-8126151 | MS.gene49698:CDS |
| TGGATTTGCTTGCATCAGCA+TGG | 0.562315 | 4.4:+8124926 | None:intergenic |
| TTCAACTTCAGAGGAAGATG+TGG | 0.564793 | 4.4:+8124894 | None:intergenic |
| GACTATACCCGAATCAGGAC+TGG | 0.565528 | 4.4:+8126637 | None:intergenic |
| TCAAGTTGATGCAATCACTC+TGG | 0.567606 | 4.4:-8125736 | MS.gene49698:CDS |
| ACAACGAACTTCACGGTGTG+GGG | 0.567913 | 4.4:-8124751 | MS.gene49698:CDS |
| GTGGCTGACTTCAACTTCAG+AGG | 0.568642 | 4.4:+8124885 | None:intergenic |
| ACCTAAAGCAAGATTACAAG+TGG | 0.568743 | 4.4:+8124462 | None:intergenic |
| GTCGAGCCATCAGACAAATC+GGG | 0.569667 | 4.4:+8124533 | None:intergenic |
| AGGTGGCTTAATACTTTGGG+TGG | 0.570268 | 4.4:-8126026 | MS.gene49698:CDS |
| AATCCAAAGAAAGTAGGTCC+AGG | 0.573224 | 4.4:-8126512 | MS.gene49698:CDS |
| TGTCAGCTTCATGGAATACA+GGG | 0.573365 | 4.4:+8126342 | None:intergenic |
| CCATACAATCCAAAGAAAGT+AGG | 0.575872 | 4.4:-8126518 | MS.gene49698:CDS |
| TGCACCACTTCCGATAGTTG+CGG | 0.576728 | 4.4:-8124956 | MS.gene49698:CDS |
| AGTGCTACTTACCTCTATGT+AGG | 0.578669 | 4.4:-8124325 | MS.gene49698:CDS |
| GAGTGCATAAAACAGGTTTG+CGG | 0.582326 | 4.4:-8126085 | MS.gene49698:CDS |
| TATTGTTCACCTACCATGCT+GGG | 0.586204 | 4.4:-8124302 | MS.gene49698:CDS |
| GATGCCGCAACTATCGGAAG+TGG | 0.586445 | 4.4:+8124952 | None:intergenic |
| ACCCAAAGTATTAAGCCACC+TGG | 0.587826 | 4.4:+8126028 | None:intergenic |
| GTAATAAAAGTTGACGAGCA+AGG | 0.588032 | 4.4:-8126200 | MS.gene49698:CDS |
| CTTTGCTACAGCTGAAATCG+GGG | 0.589133 | 4.4:-8124569 | MS.gene49698:CDS |
| AATGAATTCATTCTCAGTGG+TGG | 0.592664 | 4.4:-8125672 | MS.gene49698:CDS |
| TGGCAAGGAAGCTATTGTCT+TGG | 0.595093 | 4.4:-8126546 | MS.gene49698:CDS |
| TCTAGTAAATATGTGTCTGT+GGG | 0.595313 | 4.4:-8125009 | MS.gene49698:CDS |
| GGTGCAACCAGTAACGCGAA+TGG | 0.600582 | 4.4:+8124973 | None:intergenic |
| GCTTGAGCATCAAGCTTCAA+CGG | 0.600718 | 4.4:+8124511 | None:intergenic |
| TCTGATAGAAATTTATACGG+TGG | 0.601188 | 4.4:-8126257 | MS.gene49698:CDS |
| TAGCACTGTTCCATGTCCAA+AGG | 0.602776 | 4.4:+8124341 | None:intergenic |
| GGATGAAACTGATTCAGTTG+AGG | 0.607772 | 4.4:+8126674 | None:intergenic |
| TCTGCCCATTTGACGCCTCA+GGG | 0.609315 | 4.4:+8126147 | None:intergenic |
| AATTCATTCTCAGTGGTGGA+AGG | 0.611705 | 4.4:-8125668 | MS.gene49698:intron |
| CAACAACGAACTTCACGGTG+TGG | 0.612898 | 4.4:-8124753 | MS.gene49698:CDS |
| TTTCTCTACTTGGCTCCAGG+TGG | 0.615526 | 4.4:-8126043 | MS.gene49698:CDS |
| GAGAGATAAACCAATGAAAG+CGG | 0.621088 | 4.4:+8124606 | None:intergenic |
| ACTGATGGAACTTCTCCAGA+AGG | 0.622506 | 4.4:+8125058 | None:intergenic |
| AATAATTTACAATATTGATG+AGG | 0.622757 | 4.4:+8126111 | None:intergenic |
| TGTTGGTGATTATTGGAACT+GGG | 0.626280 | 4.4:-8124371 | MS.gene49698:CDS |
| AAAGGATGTCATATGGCTTG+TGG | 0.628507 | 4.4:-8126423 | MS.gene49698:CDS |
| CTGGAATTATTAGAGCACCA+AGG | 0.633520 | 4.4:-8126574 | MS.gene49698:CDS |
| GGTGAACAATACCTACATAG+AGG | 0.637166 | 4.4:+8124314 | None:intergenic |
| TTGCATCAACTTGATAATCA+CGG | 0.639994 | 4.4:+8125745 | None:intergenic |
| CTCGAAGCTTAAATCCTCAG+TGG | 0.643448 | 4.4:-8125977 | MS.gene49698:CDS |
| GGAGATTGAGAGCCTTACTG+AGG | 0.646348 | 4.4:-8124486 | MS.gene49698:CDS |
| TGCAAAGTGCCCAGCATGGT+AGG | 0.649906 | 4.4:+8124293 | None:intergenic |
| GAAGGCACCATGAGAACCAG+TGG | 0.651699 | 4.4:+8125767 | None:intergenic |
| ACTAAAATTACATGTCAACA+AGG | 0.655980 | 4.4:+8124253 | None:intergenic |
| AAAGAAAGTAGGTCCAGGAG+AGG | 0.656800 | 4.4:-8126507 | MS.gene49698:CDS |
| TATGTCAGCCTTGGATGCCG+AGG | 0.657130 | 4.4:-8126717 | MS.gene49698:CDS |
| CTGATATTCTCTTAGCCAAG+CGG | 0.664447 | 4.4:+8126367 | None:intergenic |
| GAGATTGAGAGCCTTACTGA+GGG | 0.667701 | 4.4:-8124485 | MS.gene49698:CDS |
| TGAATGCAAAGTGCCCAGCA+TGG | 0.671414 | 4.4:+8124289 | None:intergenic |
| CGTAATGAATTCATTCTCAG+TGG | 0.671667 | 4.4:-8125675 | MS.gene49698:CDS |
| ATCAACTTGATAATCACGGA+AGG | 0.674498 | 4.4:+8125749 | None:intergenic |
| GAACTTGTGATAAGTAACCT+CGG | 0.676628 | 4.4:+8126700 | None:intergenic |
| GAAATACCAAATTTCCACTG+AGG | 0.684867 | 4.4:+8125963 | None:intergenic |
| TGGTGATTATTGGAACTGGG+TGG | 0.696113 | 4.4:-8124368 | MS.gene49698:CDS |
| ATTTACTAGAAGATGTCAGG+AGG | 0.703197 | 4.4:+8125022 | None:intergenic |
| GTCAGCTTCATGGAATACAG+GGG | 0.707052 | 4.4:+8126343 | None:intergenic |
| AAGGCACCATGAGAACCAGT+GGG | 0.709237 | 4.4:+8125768 | None:intergenic |
| CAGTCTTAATATCTACCCTG+AGG | 0.742097 | 4.4:-8126162 | MS.gene49698:CDS |
| GGAATTATTAGAGCACCAAG+GGG | 0.759596 | 4.4:-8126572 | MS.gene49698:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAATGTTTATTAAAA+TGG | + | chr4.4:8126916-8126935 | None:intergenic | 10.0% |
| !! | ATCAATATTGTAAATTATTT+GGG | - | chr4.4:8126629-8126648 | MS.gene49698:CDS | 10.0% |
| !! | TAATATCATTAAATTCAATA+TGG | + | chr4.4:8125246-8125265 | None:intergenic | 10.0% |
| !! | AAATCACAAAAAGATTAAAA+AGG | + | chr4.4:8125736-8125755 | None:intergenic | 15.0% |
| !! | AATAATTTACAATATTGATG+AGG | + | chr4.4:8126628-8126647 | None:intergenic | 15.0% |
| !! | AATGTTTATTAAAATGGTAA+CGG | + | chr4.4:8126910-8126929 | None:intergenic | 15.0% |
| !! | CATCAATATTGTAAATTATT+TGG | - | chr4.4:8126628-8126647 | MS.gene49698:CDS | 15.0% |
| !! | TATTCTGATAGAAATTTATA+CGG | - | chr4.4:8126476-8126495 | MS.gene49698:CDS | 15.0% |
| !!! | ATAATTTTGTACTTCATTTT+GGG | - | chr4.4:8128030-8128049 | MS.gene49698:intron | 15.0% |
| !!! | ATATATTAATGTCTTTGTTT+TGG | - | chr4.4:8125810-8125829 | MS.gene49698:intron | 15.0% |
| !! | AAATTATATTTACTTCCACT+AGG | - | chr4.4:8127336-8127355 | MS.gene49698:intron | 20.0% |
| !! | AATACAAAATTAAGAAGCTT+TGG | + | chr4.4:8125889-8125908 | None:intergenic | 20.0% |
| !! | AATTATATTTACTTCCACTA+GGG | - | chr4.4:8127337-8127356 | MS.gene49698:intron | 20.0% |
| !! | ATGTTTATTAAAATGGTAAC+GGG | + | chr4.4:8126909-8126928 | None:intergenic | 20.0% |
| !! | GTATTTGATATAGGAAATAT+GGG | + | chr4.4:8127951-8127970 | None:intergenic | 20.0% |
| !! | TCTGAATTTGAATTTGAATT+TGG | - | chr4.4:8124396-8124415 | MS.gene49698:CDS | 20.0% |
| !! | TTAATGATATTATGATGAAG+TGG | - | chr4.4:8125254-8125273 | MS.gene49698:intron | 20.0% |
| !!! | AATAAGTTGAAAGTAGTTTA+TGG | - | chr4.4:8124722-8124741 | MS.gene49698:CDS | 20.0% |
| !!! | ACTTTCAACTTATTTTCATA+AGG | + | chr4.4:8124716-8124735 | None:intergenic | 20.0% |
| !!! | AGTATTGCTATTAATGAAAT+TGG | - | chr4.4:8126443-8126462 | MS.gene49698:CDS | 20.0% |
| !!! | ATTTTTAACTCCTAAATATG+TGG | - | chr4.4:8127174-8127193 | MS.gene49698:intron | 20.0% |
| !!! | CATAATTTTGTACTTCATTT+TGG | - | chr4.4:8128029-8128048 | MS.gene49698:intron | 20.0% |
| !!! | GAAAGTATTATTTATAGTCA+GGG | - | chr4.4:8125595-8125614 | MS.gene49698:intron | 20.0% |
| !!! | TATTATTTCTTTTTCCAAGA+GGG | - | chr4.4:8127468-8127487 | MS.gene49698:intron | 20.0% |
| !!! | TCAAGTTATTTCCATAAATT+AGG | + | chr4.4:8124591-8124610 | None:intergenic | 20.0% |
| !!! | TGAAAGTATTATTTATAGTC+AGG | - | chr4.4:8125594-8125613 | MS.gene49698:intron | 20.0% |
| !!! | TTTTTAACTCCTAAATATGT+GGG | - | chr4.4:8127175-8127194 | MS.gene49698:intron | 20.0% |
| ! | AAATGAGAAAGAGATGAAAA+TGG | + | chr4.4:8124936-8124955 | None:intergenic | 25.0% |
| ! | AACTTTATAGTTCTTCAGTT+GGG | - | chr4.4:8125475-8125494 | MS.gene49698:intron | 25.0% |
| ! | AAGATGTTACAAATAACACT+TGG | + | chr4.4:8127108-8127127 | None:intergenic | 25.0% |
| ! | ACAAAAAGATTAAAAAGGTG+TGG | + | chr4.4:8125731-8125750 | None:intergenic | 25.0% |
| ! | AGTAAATGGAAAACATAAAC+AGG | + | chr4.4:8127208-8127227 | None:intergenic | 25.0% |
| ! | ATGACAAATGACAGTTTATT+GGG | - | chr4.4:8127429-8127448 | MS.gene49698:intron | 25.0% |
| ! | GGTATTTGATATAGGAAATA+TGG | + | chr4.4:8127952-8127971 | None:intergenic | 25.0% |
| ! | GTAAATGGAAAACATAAACA+GGG | + | chr4.4:8127207-8127226 | None:intergenic | 25.0% |
| ! | GTGTATGTTTACTTAAGAAA+AGG | - | chr4.4:8127259-8127278 | MS.gene49698:intron | 25.0% |
| ! | TAACTTTATAGTTCTTCAGT+TGG | - | chr4.4:8125474-8125493 | MS.gene49698:intron | 25.0% |
| ! | TGGAATTAGGTATTTGATAT+AGG | + | chr4.4:8127960-8127979 | None:intergenic | 25.0% |
| ! | TTCACTAAAAAATATGCTAC+CGG | + | chr4.4:8128315-8128334 | None:intergenic | 25.0% |
| !! | AAGCTAAAGAAACTTTAGAA+GGG | - | chr4.4:8127360-8127379 | MS.gene49698:intron | 25.0% |
| !! | TAAGTATTGTTAGCAAGTAT+AGG | + | chr4.4:8124512-8124531 | None:intergenic | 25.0% |
| !! | TGTTTATTAAAATGGTAACG+GGG | + | chr4.4:8126908-8126927 | None:intergenic | 25.0% |
| !!! | AAGTGTTATTTGTAACATCT+TGG | - | chr4.4:8127107-8127126 | MS.gene49698:intron | 25.0% |
| !!! | AATTTGCTATTAGTGTAAAC+CGG | - | chr4.4:8125153-8125172 | MS.gene49698:intron | 25.0% |
| !!! | CTTTTTCCCTAAGTTTTTTT+TGG | - | chr4.4:8124687-8124706 | MS.gene49698:CDS | 25.0% |
| !!! | GATTTTAATGGTACTAATGT+TGG | - | chr4.4:8128348-8128367 | MS.gene49698:intron | 25.0% |
| !!! | GTAGCATATTTTTTAGTGAA+AGG | - | chr4.4:8128315-8128334 | MS.gene49698:intron | 25.0% |
| !!! | GTATTATTTCTTTTTCCAAG+AGG | - | chr4.4:8127467-8127486 | MS.gene49698:intron | 25.0% |
| !!! | TTTTAACTCCTAAATATGTG+GGG | - | chr4.4:8127176-8127195 | MS.gene49698:intron | 25.0% |
| AACATCTTGGAATAAATGTC+TGG | - | chr4.4:8127120-8127139 | MS.gene49698:intron | 30.0% | |
| AAGGTCTCCAAAAAAAACTT+AGG | + | chr4.4:8124697-8124716 | None:intergenic | 30.0% | |
| AATAAATGTCTGGTCATCAA+TGG | - | chr4.4:8127130-8127149 | MS.gene49698:intron | 30.0% | |
| AGAGTAAAAGTTAACTACCT+GGG | + | chr4.4:8126849-8126868 | None:intergenic | 30.0% | |
| AGGTCTCCAAAAAAAACTTA+GGG | + | chr4.4:8124696-8124715 | None:intergenic | 30.0% | |
| ATATAGGAAATATGGGAGTA+AGG | + | chr4.4:8127944-8127963 | None:intergenic | 30.0% | |
| ATGAGTAAGAATAACTGTGT+TGG | - | chr4.4:8124430-8124449 | MS.gene49698:CDS | 30.0% | |
| CAAATCATTGACGAATTTGT+TGG | + | chr4.4:8124893-8124912 | None:intergenic | 30.0% | |
| CAGTATGGCTAATTATTTGA+AGG | - | chr4.4:8127286-8127305 | MS.gene49698:intron | 30.0% | |
| CATATTTACTAGAAGATGTC+AGG | + | chr4.4:8127720-8127739 | None:intergenic | 30.0% | |
| CATGACAAATGACAGTTTAT+TGG | - | chr4.4:8127428-8127447 | MS.gene49698:intron | 30.0% | |
| CCTCAATAAACAGTTATGAA+AGG | + | chr4.4:8125672-8125691 | None:intergenic | 30.0% | |
| CCTTTCATAACTGTTTATTG+AGG | - | chr4.4:8125669-8125688 | MS.gene49698:CDS | 30.0% | |
| CTTCTGTTCATGTTCTTATA+TGG | - | chr4.4:8125408-8125427 | MS.gene49698:intron | 30.0% | |
| CTTTCTCAACACCTAATTTA+TGG | - | chr4.4:8124577-8124596 | MS.gene49698:CDS | 30.0% | |
| GAAGCTAAAGAAACTTTAGA+AGG | - | chr4.4:8127359-8127378 | MS.gene49698:intron | 30.0% | |
| GACTTTCATTGGATGTTATT+TGG | - | chr4.4:8125287-8125306 | MS.gene49698:intron | 30.0% | |
| GGTATAAAAAGAATGACTGA+TGG | + | chr4.4:8127696-8127715 | None:intergenic | 30.0% | |
| TAGAGTAAAAGTTAACTACC+TGG | + | chr4.4:8126850-8126869 | None:intergenic | 30.0% | |
| TATTAACTATGTCAGCTTCA+TGG | + | chr4.4:8126406-8126425 | None:intergenic | 30.0% | |
| TATTAAGACTGTCTTCATGA+TGG | + | chr4.4:8126565-8126584 | None:intergenic | 30.0% | |
| TATTTATAGTCAGGGATTAG+AGG | - | chr4.4:8125603-8125622 | MS.gene49698:intron | 30.0% | |
| TCTAGTAAATATGTGTCTGT+GGG | - | chr4.4:8127727-8127746 | MS.gene49698:intron | 30.0% | |
| TCTGATAGAAATTTATACGG+TGG | - | chr4.4:8126479-8126498 | MS.gene49698:CDS | 30.0% | |
| TGCAGTTACATGATAGTAAA+TGG | + | chr4.4:8127222-8127241 | None:intergenic | 30.0% | |
| TTAAATCCTCAGTGGAAATT+TGG | - | chr4.4:8126767-8126786 | MS.gene49698:intron | 30.0% | |
| TTAAGAAAAGGAGAACAGTA+TGG | - | chr4.4:8127271-8127290 | MS.gene49698:intron | 30.0% | |
| TTCTAGTAAATATGTGTCTG+TGG | - | chr4.4:8127726-8127745 | MS.gene49698:intron | 30.0% | |
| TTTACAAGCAGAGAGAAAAT+AGG | + | chr4.4:8125925-8125944 | None:intergenic | 30.0% | |
| TTTGAAAATCCCATCCAAAT+AGG | - | chr4.4:8125835-8125854 | MS.gene49698:intron | 30.0% | |
| ! | AAGAAGATGTTTTCTCTACT+TGG | - | chr4.4:8126683-8126702 | MS.gene49698:CDS | 30.0% |
| ! | ACTGTCATTTGTCATGTTAA+AGG | + | chr4.4:8127424-8127443 | None:intergenic | 30.0% |
| ! | AGTTTGACTTCACTTATTTG+AGG | + | chr4.4:8124647-8124666 | None:intergenic | 30.0% |
| ! | CACAAACATTTAAGTTCACA+GGG | + | chr4.4:8125508-8125527 | None:intergenic | 30.0% |
| ! | GGTGCATTTGAAGATTTTAA+TGG | - | chr4.4:8128336-8128355 | MS.gene49698:intron | 30.0% |
| ! | TATTTGGATGGGATTTTCAA+AGG | + | chr4.4:8125836-8125855 | None:intergenic | 30.0% |
| ! | TTGCATCAACTTGATAATCA+CGG | + | chr4.4:8126994-8127013 | None:intergenic | 30.0% |
| !! | AGGTTTTGGTCATTCATTTA+TGG | - | chr4.4:8127905-8127924 | MS.gene49698:intron | 30.0% |
| !! | ATTCAATAATCTGTTTCTGC+AGG | - | chr4.4:8124826-8124845 | MS.gene49698:CDS | 30.0% |
| !! | ATTTGCTATTAGTGTAAACC+GGG | - | chr4.4:8125154-8125173 | MS.gene49698:intron | 30.0% |
| !! | GGTTTTGGTCATTCATTTAT+GGG | - | chr4.4:8127906-8127925 | MS.gene49698:intron | 30.0% |
| !! | GTACTAATGTTGGTGATTAT+TGG | - | chr4.4:8128358-8128377 | MS.gene49698:intron | 30.0% |
| !! | GTGATTTTGATCATACTAGT+TGG | - | chr4.4:8125749-8125768 | MS.gene49698:CDS | 30.0% |
| !! | GTTTTGGTCATTCATTTATG+GGG | - | chr4.4:8127907-8127926 | MS.gene49698:intron | 30.0% |
| AACATAAGCTGTTCATCACT+TGG | - | chr4.4:8126128-8126147 | MS.gene49698:CDS | 35.0% | |
| AACTTTGCTACAGCTGAAAT+CGG | - | chr4.4:8128165-8128184 | MS.gene49698:intron | 35.0% | |
| AATGAATTCATTCTCAGTGG+TGG | - | chr4.4:8127064-8127083 | MS.gene49698:intron | 35.0% | |
| ACAATATCAACCGCTTTCAT+TGG | - | chr4.4:8128120-8128139 | MS.gene49698:intron | 35.0% | |
| ACCTAAAGCAAGATTACAAG+TGG | + | chr4.4:8128277-8128296 | None:intergenic | 35.0% | |
| ACTAAAAAATATGCTACCGG+AGG | + | chr4.4:8128312-8128331 | None:intergenic | 35.0% | |
| ATGAATGACCAAAACCTTTC+TGG | + | chr4.4:8127902-8127921 | None:intergenic | 35.0% | |
| ATGATGAAGTGGCAAAATAG+TGG | - | chr4.4:8125265-8125284 | MS.gene49698:intron | 35.0% | |
| ATGTTATGCACACTATCTAC+TGG | - | chr4.4:8125383-8125402 | MS.gene49698:intron | 35.0% | |
| ATTTACTAGAAGATGTCAGG+AGG | + | chr4.4:8127717-8127736 | None:intergenic | 35.0% | |
| ATTTGTATATCATTCCTCCC+AGG | - | chr4.4:8126934-8126953 | MS.gene49698:intron | 35.0% | |
| CCATACAATCCAAAGAAAGT+AGG | - | chr4.4:8126218-8126237 | MS.gene49698:CDS | 35.0% | |
| CCTACTTTCTTTGGATTGTA+TGG | + | chr4.4:8126221-8126240 | None:intergenic | 35.0% | |
| CCTGTGAACTTAAATGTTTG+TGG | - | chr4.4:8125506-8125525 | MS.gene49698:intron | 35.0% | |
| CGTAATGAATTCATTCTCAG+TGG | - | chr4.4:8127061-8127080 | MS.gene49698:intron | 35.0% | |
| GAAATACCAAATTTCCACTG+AGG | + | chr4.4:8126776-8126795 | None:intergenic | 35.0% | |
| GAACTTGTGATAAGTAACCT+CGG | + | chr4.4:8126039-8126058 | None:intergenic | 35.0% | |
| GAGAGATAAACCAATGAAAG+CGG | + | chr4.4:8128133-8128152 | None:intergenic | 35.0% | |
| GGTGGTATATTTGAATCTCT+GGG | - | chr4.4:8126728-8126747 | MS.gene49698:CDS | 35.0% | |
| GTAATAAAAGTTGACGAGCA+AGG | - | chr4.4:8126536-8126555 | MS.gene49698:CDS | 35.0% | |
| TATAGACTATAGAGCCAGTT+TGG | + | chr4.4:8125707-8125726 | None:intergenic | 35.0% | |
| TCATCATGTAAGTGTAAACC+CGG | + | chr4.4:8125175-8125194 | None:intergenic | 35.0% | |
| TGGACGAGTTTGAATTTACA+TGG | - | chr4.4:8125428-8125447 | MS.gene49698:intron | 35.0% | |
| TGTTATGCACACTATCTACT+GGG | - | chr4.4:8125384-8125403 | MS.gene49698:intron | 35.0% | |
| TTACAATATTGATGAGGTCG+AGG | + | chr4.4:8126622-8126641 | None:intergenic | 35.0% | |
| TTTGTATATCATTCCTCCCA+GGG | - | chr4.4:8126935-8126954 | MS.gene49698:intron | 35.0% | |
| ! | ATCAACTTGATAATCACGGA+AGG | + | chr4.4:8126990-8127009 | None:intergenic | 35.0% |
| ! | ATTGGATGTTATTTGGACCT+TGG | - | chr4.4:8125294-8125313 | MS.gene49698:intron | 35.0% |
| ! | CCACAAACATTTAAGTTCAC+AGG | + | chr4.4:8125509-8125528 | None:intergenic | 35.0% |
| ! | GATGAAACTGATTCAGTTGA+GGG | + | chr4.4:8126064-8126083 | None:intergenic | 35.0% |
| ! | GTAAGAATAACTGTGTTGGT+TGG | - | chr4.4:8124434-8124453 | MS.gene49698:CDS | 35.0% |
| ! | TAGCTTTTGCCTATTTGGAT+GGG | + | chr4.4:8125847-8125866 | None:intergenic | 35.0% |
| ! | TATTTCTTTTTCCAAGAGGG+AGG | - | chr4.4:8127471-8127490 | MS.gene49698:intron | 35.0% |
| ! | TATTTGGGAGTGCATAAAAC+AGG | - | chr4.4:8126644-8126663 | MS.gene49698:CDS | 35.0% |
| ! | TGGAATTATTAGAGCACCAA+GGG | - | chr4.4:8126163-8126182 | MS.gene49698:CDS | 35.0% |
| !! | ATGTTGGTGATTATTGGAAC+TGG | - | chr4.4:8128364-8128383 | MS.gene49698:intron | 35.0% |
| !! | ATTGACGAATTTGTTGGCAT+GGG | + | chr4.4:8124887-8124906 | None:intergenic | 35.0% |
| !! | ATTTTAGCAGGAGAAGCTTT+TGG | + | chr4.4:8127034-8127053 | None:intergenic | 35.0% |
| !! | GCAAAATAGTGGACTTTCAT+TGG | - | chr4.4:8125276-8125295 | MS.gene49698:intron | 35.0% |
| !! | TGTTGGTGATTATTGGAACT+GGG | - | chr4.4:8128365-8128384 | MS.gene49698:intron | 35.0% |
| AAAAACCCTAACCGTACGAT+TGG | + | chr4.4:8124315-8124334 | None:intergenic | 40.0% | |
| AAAACCCTAACCGTACGATT+GGG | + | chr4.4:8124314-8124333 | None:intergenic | 40.0% | |
| AAAGGATGTCATATGGCTTG+TGG | - | chr4.4:8126313-8126332 | MS.gene49698:CDS | 40.0% | |
| AATATTGATGAGGTCGAGGT+TGG | + | chr4.4:8126618-8126637 | None:intergenic | 40.0% | |
| AATCCAAAGAAAGTAGGTCC+AGG | - | chr4.4:8126224-8126243 | MS.gene49698:CDS | 40.0% | |
| ACGCTCAATAAACAACCTTC+TGG | - | chr4.4:8127663-8127682 | MS.gene49698:intron | 40.0% | |
| ACTTTGCTACAGCTGAAATC+GGG | - | chr4.4:8128166-8128185 | MS.gene49698:intron | 40.0% | |
| ATATTGATGAGGTCGAGGTT+GGG | + | chr4.4:8126617-8126636 | None:intergenic | 40.0% | |
| ATGTCAGCTTCATGGAATAC+AGG | + | chr4.4:8126398-8126417 | None:intergenic | 40.0% | |
| CAGTCTTAATATCTACCCTG+AGG | - | chr4.4:8126574-8126593 | MS.gene49698:CDS | 40.0% | |
| CATTAATGCGACTTCGATTG+AGG | - | chr4.4:8125061-8125080 | MS.gene49698:CDS | 40.0% | |
| CTGATATTCTCTTAGCCAAG+CGG | + | chr4.4:8126372-8126391 | None:intergenic | 40.0% | |
| CTTCTCCTGCTAAAATGATC+AGG | - | chr4.4:8127038-8127057 | MS.gene49698:intron | 40.0% | |
| GAGTGCATAAAACAGGTTTG+CGG | - | chr4.4:8126651-8126670 | MS.gene49698:CDS | 40.0% | |
| GCCACTTGTAATCTTGCTTT+AGG | - | chr4.4:8128273-8128292 | MS.gene49698:CDS | 40.0% | |
| GGACAACTCATTATCCAAAC+TGG | - | chr4.4:8125690-8125709 | MS.gene49698:CDS | 40.0% | |
| GGGTGGTATATTTGAATCTC+TGG | - | chr4.4:8126727-8126746 | MS.gene49698:CDS | 40.0% | |
| GGTGAACAATACCTACATAG+AGG | + | chr4.4:8128425-8128444 | None:intergenic | 40.0% | |
| TATTGTTCACCTACCATGCT+GGG | - | chr4.4:8128434-8128453 | MS.gene49698:CDS | 40.0% | |
| TCAACCTGAGAAAGGAGAAT+GGG | - | chr4.4:8128080-8128099 | MS.gene49698:intron | 40.0% | |
| TCACTTGGAATCAACATTGC+TGG | - | chr4.4:8126143-8126162 | MS.gene49698:CDS | 40.0% | |
| TCAGCCACAAATCTTGGAAA+TGG | - | chr4.4:8127866-8127885 | MS.gene49698:CDS | 40.0% | |
| TCAGCCATTTCCAAGATTTG+TGG | + | chr4.4:8127873-8127892 | None:intergenic | 40.0% | |
| TCCAGGTGGCTTAATACTTT+GGG | - | chr4.4:8126707-8126726 | MS.gene49698:CDS | 40.0% | |
| TCTCTCACAGTAACTATGTC+AGG | - | chr4.4:8124340-8124359 | MS.gene49698:CDS | 40.0% | |
| TCTGCTACTCAGTATGTTGA+GGG | - | chr4.4:8126794-8126813 | MS.gene49698:intron | 40.0% | |
| TGCACAATATATGTCAGCCT+TGG | - | chr4.4:8126010-8126029 | MS.gene49698:CDS | 40.0% | |
| TGTCAGCTTCATGGAATACA+GGG | + | chr4.4:8126397-8126416 | None:intergenic | 40.0% | |
| TTCAACTTCAGAGGAAGATG+TGG | + | chr4.4:8127845-8127864 | None:intergenic | 40.0% | |
| TTCTGCTACTCAGTATGTTG+AGG | - | chr4.4:8126793-8126812 | MS.gene49698:intron | 40.0% | |
| TTGAAGTCAGCCACAAATCT+TGG | - | chr4.4:8127860-8127879 | MS.gene49698:CDS | 40.0% | |
| ! | AATTCATTCTCAGTGGTGGA+AGG | - | chr4.4:8127068-8127087 | MS.gene49698:intron | 40.0% |
| ! | AGTTTCTTTAGCTTCCCTAG+TGG | + | chr4.4:8127354-8127373 | None:intergenic | 40.0% |
| ! | ATCTTTGGGCATTGCTTACT+CGG | - | chr4.4:8126256-8126275 | MS.gene49698:CDS | 40.0% |
| ! | ATGCAGCGGCTCAATTTTAA+AGG | + | chr4.4:8125044-8125063 | None:intergenic | 40.0% |
| ! | CGAATTCTCGGTTTCTTTTC+CGG | + | chr4.4:8124291-8124310 | None:intergenic | 40.0% |
| ! | CTGGAATTATTAGAGCACCA+AGG | - | chr4.4:8126162-8126181 | MS.gene49698:CDS | 40.0% |
| ! | CTTGTGGCTGATTCACAATA+TGG | - | chr4.4:8126329-8126348 | MS.gene49698:CDS | 40.0% |
| ! | GGAATTATTAGAGCACCAAG+GGG | - | chr4.4:8126164-8126183 | MS.gene49698:CDS | 40.0% |
| ! | GGATGAAACTGATTCAGTTG+AGG | + | chr4.4:8126065-8126084 | None:intergenic | 40.0% |
| ! | GTAGCTTTTGCCTATTTGGA+TGG | + | chr4.4:8125848-8125867 | None:intergenic | 40.0% |
| ! | TCTCGTAGCTTTTGCCTATT+TGG | + | chr4.4:8125852-8125871 | None:intergenic | 40.0% |
| ! | TTTGAGACTATACCCGAATC+AGG | + | chr4.4:8126107-8126126 | None:intergenic | 40.0% |
| ! | TTTTAGACGTGCTGGAACTA+TGG | - | chr4.4:8126502-8126521 | MS.gene49698:CDS | 40.0% |
| ! | TTTTTCACCAGTCCTGATTC+GGG | - | chr4.4:8126092-8126111 | MS.gene49698:CDS | 40.0% |
| !! | ACTTGTTGCAGGTTGATTGA+AGG | - | chr4.4:8127634-8127653 | MS.gene49698:intron | 40.0% |
| !! | AGCTTGCTTTGTTTCGTATC+TGG | - | chr4.4:8124464-8124483 | MS.gene49698:CDS | 40.0% |
| !! | AGTGCTACTTACCTCTATGT+AGG | - | chr4.4:8128411-8128430 | MS.gene49698:CDS | 40.0% |
| !! | CATTGACGAATTTGTTGGCA+TGG | + | chr4.4:8124888-8124907 | None:intergenic | 40.0% |
| !! | CTTTTTCACCAGTCCTGATT+CGG | - | chr4.4:8126091-8126110 | MS.gene49698:CDS | 40.0% |
| !! | TCAAGTTGATGCAATCACTC+TGG | - | chr4.4:8127000-8127019 | MS.gene49698:intron | 40.0% |
| !! | TTACGCCTGATCATTTTAGC+AGG | + | chr4.4:8127046-8127065 | None:intergenic | 40.0% |
| !! | TTAGGTGTTGAGAAAGAGAG+AGG | + | chr4.4:8124573-8124592 | None:intergenic | 40.0% |
| !!! | AGGTTTTATTGCGTTTCCTC+CGG | - | chr4.4:8128293-8128312 | MS.gene49698:intron | 40.0% |
| AAAGAAAGTAGGTCCAGGAG+AGG | - | chr4.4:8126229-8126248 | MS.gene49698:CDS | 45.0% | |
| AACAACGAACTTCACGGTGT+GGG | - | chr4.4:8127984-8128003 | MS.gene49698:intron | 45.0% | |
| ACACCGTGAAGTTCGTTGTT+GGG | + | chr4.4:8127984-8128003 | None:intergenic | 45.0% | |
| ACTGATGGAACTTCTCCAGA+AGG | + | chr4.4:8127681-8127700 | None:intergenic | 45.0% | |
| AGCACTGTTCCATGTCCAAA+GGG | + | chr4.4:8128397-8128416 | None:intergenic | 45.0% | |
| AGGTGGCTTAATACTTTGGG+TGG | - | chr4.4:8126710-8126729 | MS.gene49698:CDS | 45.0% | |
| AGTTCAGTCTCAGTCGTTAG+AGG | - | chr4.4:8127312-8127331 | MS.gene49698:intron | 45.0% | |
| ATAAGTAACCTCGGCATCCA+AGG | + | chr4.4:8126030-8126049 | None:intergenic | 45.0% | |
| ATATCATTCCTCCCAGGGTT+TGG | - | chr4.4:8126940-8126959 | MS.gene49698:intron | 45.0% | |
| CATGATTCCATTCGCGTTAC+TGG | - | chr4.4:8127756-8127775 | MS.gene49698:intron | 45.0% | |
| CGCTTGGCTAAGAGAATATC+AGG | - | chr4.4:8126370-8126389 | MS.gene49698:CDS | 45.0% | |
| CGGTGTTCTCACTTCTTTCA+CGG | - | chr4.4:8126276-8126295 | MS.gene49698:CDS | 45.0% | |
| CTCAACCTGAGAAAGGAGAA+TGG | - | chr4.4:8128079-8128098 | MS.gene49698:intron | 45.0% | |
| CTCCAGGTGGCTTAATACTT+TGG | - | chr4.4:8126706-8126725 | MS.gene49698:CDS | 45.0% | |
| CTCGAAGCTTAAATCCTCAG+TGG | - | chr4.4:8126759-8126778 | MS.gene49698:intron | 45.0% | |
| CTTTGCTACAGCTGAAATCG+GGG | - | chr4.4:8128167-8128186 | MS.gene49698:intron | 45.0% | |
| GATGGAGCAGCTTCGAAAAT+TGG | + | chr4.4:8128060-8128079 | None:intergenic | 45.0% | |
| GCGTAACTAACCAGGCATAA+GGG | + | chr4.4:8124549-8124568 | None:intergenic | 45.0% | |
| GCTTGAGCATCAAGCTTCAA+CGG | + | chr4.4:8128228-8128247 | None:intergenic | 45.0% | |
| GGCAAGTTCAATGTATTCCC+AGG | - | chr4.4:8126829-8126848 | MS.gene49698:intron | 45.0% | |
| GGTGTTCTCACTTCTTTCAC+GGG | - | chr4.4:8126277-8126296 | MS.gene49698:CDS | 45.0% | |
| GTATTGTTCACCTACCATGC+TGG | - | chr4.4:8128433-8128452 | MS.gene49698:CDS | 45.0% | |
| GTCAGCTTCATGGAATACAG+GGG | + | chr4.4:8126396-8126415 | None:intergenic | 45.0% | |
| TAGCACTGTTCCATGTCCAA+AGG | + | chr4.4:8128398-8128417 | None:intergenic | 45.0% | |
| TATCATTCCTCCCAGGGTTT+GGG | - | chr4.4:8126941-8126960 | MS.gene49698:intron | 45.0% | |
| TCGAAGTCGCATTAATGCAG+CGG | + | chr4.4:8125058-8125077 | None:intergenic | 45.0% | |
| TCTCCTGGACCTACTTTCTT+TGG | + | chr4.4:8126230-8126249 | None:intergenic | 45.0% | |
| TGAAGCTTGATGCTCAAGCT+AGG | - | chr4.4:8128229-8128248 | MS.gene49698:CDS | 45.0% | |
| TGCGTAACTAACCAGGCATA+AGG | + | chr4.4:8124550-8124569 | None:intergenic | 45.0% | |
| TGGCAAGGAAGCTATTGTCT+TGG | - | chr4.4:8126190-8126209 | MS.gene49698:CDS | 45.0% | |
| TGGTGATTATTGGAACTGGG+TGG | - | chr4.4:8128368-8128387 | MS.gene49698:intron | 45.0% | |
| TTCGTTGTTGGGGTGGAATT+AGG | + | chr4.4:8127973-8127992 | None:intergenic | 45.0% | |
| TTTAGTGTGAACCAGCTCCA+AGG | + | chr4.4:8125314-8125333 | None:intergenic | 45.0% | |
| ! | ACCCAAAGTATTAAGCCACC+TGG | + | chr4.4:8126711-8126730 | None:intergenic | 45.0% |
| ! | CACTTCTTTCACGGGTTACT+TGG | - | chr4.4:8126285-8126304 | MS.gene49698:CDS | 45.0% |
| ! | CATTGTCCCGATTTGTCTGA+TGG | - | chr4.4:8128197-8128216 | MS.gene49698:intron | 45.0% |
| ! | CCAGGAGAGGCTTTATCTTT+GGG | - | chr4.4:8126242-8126261 | MS.gene49698:CDS | 45.0% |
| ! | GAACTCAGCCAGAAAGGTTT+TGG | - | chr4.4:8127891-8127910 | MS.gene49698:CDS | 45.0% |
| ! | GGAAGATGTGGATTGAAGAG+TGG | + | chr4.4:8127833-8127852 | None:intergenic | 45.0% |
| ! | GGACTGGTGAAAAAGTGCAA+CGG | + | chr4.4:8126086-8126105 | None:intergenic | 45.0% |
| ! | TCCAGGAGAGGCTTTATCTT+TGG | - | chr4.4:8126241-8126260 | MS.gene49698:CDS | 45.0% |
| ! | TGGATTTGCTTGCATCAGCA+TGG | + | chr4.4:8127813-8127832 | None:intergenic | 45.0% |
| ! | TGTTATTTGGACCTTGGAGC+TGG | - | chr4.4:8125300-8125319 | MS.gene49698:intron | 45.0% |
| ! | TGTTTTCTCTACTTGGCTCC+AGG | - | chr4.4:8126690-8126709 | MS.gene49698:CDS | 45.0% |
| !! | AAGAGTGTGCTACTTGTTGC+AGG | - | chr4.4:8127623-8127642 | MS.gene49698:intron | 45.0% |
| !! | TCTCCTTTCTCAGGTTGAGA+TGG | + | chr4.4:8128078-8128097 | None:intergenic | 45.0% |
| !!! | ACCAGGCATAAGGGCATTTT+CGG | + | chr4.4:8124540-8124559 | None:intergenic | 45.0% |
| AATATTCTGCCGTGTCCGCT+TGG | - | chr4.4:8126354-8126373 | MS.gene49698:CDS | 50.0% | |
| ACAACGAACTTCACGGTGTG+GGG | - | chr4.4:8127985-8128004 | MS.gene49698:intron | 50.0% | |
| ATGGCTGAACTCAGCCAGAA+AGG | - | chr4.4:8127885-8127904 | MS.gene49698:CDS | 50.0% | |
| ATTCGCCCAATCGTACGGTT+AGG | - | chr4.4:8124306-8124325 | MS.gene49698:CDS | 50.0% | |
| CAACAACGAACTTCACGGTG+TGG | - | chr4.4:8127983-8128002 | MS.gene49698:intron | 50.0% | |
| CACACCGTGAAGTTCGTTGT+TGG | + | chr4.4:8127985-8128004 | None:intergenic | 50.0% | |
| CACCCCAACAACGAACTTCA+CGG | - | chr4.4:8127978-8127997 | MS.gene49698:intron | 50.0% | |
| CACCGTGAAGTTCGTTGTTG+GGG | + | chr4.4:8127983-8128002 | None:intergenic | 50.0% | |
| CCCAAAGATAAAGCCTCTCC+TGG | + | chr4.4:8126245-8126264 | None:intergenic | 50.0% | |
| CGAGAATTCGCCCAATCGTA+CGG | - | chr4.4:8124301-8124320 | MS.gene49698:CDS | 50.0% | |
| CGTACGATTGGGCGAATTCT+CGG | + | chr4.4:8124303-8124322 | None:intergenic | 50.0% | |
| CTAGCCCATTCTCCTTTCTC+AGG | + | chr4.4:8128087-8128106 | None:intergenic | 50.0% | |
| GACTATACCCGAATCAGGAC+TGG | + | chr4.4:8126102-8126121 | None:intergenic | 50.0% | |
| GCTCCATCTCAACCTGAGAA+AGG | - | chr4.4:8128072-8128091 | MS.gene49698:intron | 50.0% | |
| GGCTGGCAAAGGATGTCATA+TGG | - | chr4.4:8126306-8126325 | MS.gene49698:CDS | 50.0% | |
| GGGCATCACCCCACATATTT+AGG | + | chr4.4:8127187-8127206 | None:intergenic | 50.0% | |
| GGTCGAGCCATCAGACAAAT+CGG | + | chr4.4:8128207-8128226 | None:intergenic | 50.0% | |
| GTCAGGGATTAGAGGTAGAG+TGG | - | chr4.4:8125611-8125630 | MS.gene49698:intron | 50.0% | |
| GTCGAGCCATCAGACAAATC+GGG | + | chr4.4:8128206-8128225 | None:intergenic | 50.0% | |
| TCACAATCACACCTCCCTCT+TGG | + | chr4.4:8127485-8127504 | None:intergenic | 50.0% | |
| TCCGAAAATGCCCTTATGCC+TGG | - | chr4.4:8124536-8124555 | MS.gene49698:CDS | 50.0% | |
| TGCACCACTTCCGATAGTTG+CGG | - | chr4.4:8127780-8127799 | MS.gene49698:intron | 50.0% | |
| TGGAGAGATGCCGCAACTAT+CGG | + | chr4.4:8127793-8127812 | None:intergenic | 50.0% | |
| TTCGCCCAATCGTACGGTTA+GGG | - | chr4.4:8124307-8124326 | MS.gene49698:CDS | 50.0% | |
| TTCTCTTAGCCAAGCGGACA+CGG | + | chr4.4:8126366-8126385 | None:intergenic | 50.0% | |
| TTTCTCTACTTGGCTCCAGG+TGG | - | chr4.4:8126693-8126712 | MS.gene49698:CDS | 50.0% | |
| ! | AAGGCACCATGAGAACCAGT+GGG | + | chr4.4:8126971-8126990 | None:intergenic | 50.0% |
| ! | AGAGAGGTGCGTAACTAACC+AGG | + | chr4.4:8124557-8124576 | None:intergenic | 50.0% |
| ! | AGAGGGAGGTGTGATTGTGA+TGG | - | chr4.4:8127485-8127504 | MS.gene49698:intron | 50.0% |
| ! | ATCTACCCTGAGGCGTCAAA+TGG | - | chr4.4:8126584-8126603 | MS.gene49698:CDS | 50.0% |
| ! | ATTAGAGCACCAAGGGGTGA+TGG | - | chr4.4:8126170-8126189 | MS.gene49698:CDS | 50.0% |
| ! | GTGGCTGACTTCAACTTCAG+AGG | + | chr4.4:8127854-8127873 | None:intergenic | 50.0% |
| ! | TCTACCCTGAGGCGTCAAAT+GGG | - | chr4.4:8126585-8126604 | MS.gene49698:CDS | 50.0% |
| ! | TCTTTCACGGGTTACTTGGC+TGG | - | chr4.4:8126289-8126308 | MS.gene49698:CDS | 50.0% |
| ! | TGAATGCAAAGTGCCCAGCA+TGG | + | chr4.4:8128450-8128469 | None:intergenic | 50.0% |
| !!! | TACGGTGGTTTTAGACGTGC+TGG | - | chr4.4:8126494-8126513 | MS.gene49698:CDS | 50.0% |
| AGTGGGAACACCCAAACCCT+GGG | + | chr4.4:8126954-8126973 | None:intergenic | 55.0% | |
| ATCTGCCCATTTGACGCCTC+AGG | + | chr4.4:8126593-8126612 | None:intergenic | 55.0% | |
| CGTGAAGTTCGTTGTTGGGG+TGG | + | chr4.4:8127980-8127999 | None:intergenic | 55.0% | |
| GATGCCGCAACTATCGGAAG+TGG | + | chr4.4:8127787-8127806 | None:intergenic | 55.0% | |
| GGAACTGGGTGGAATCCCTT+TGG | - | chr4.4:8128379-8128398 | MS.gene49698:intron | 55.0% | |
| GGGTGGAATCCCTTTGGACA+TGG | - | chr4.4:8128385-8128404 | MS.gene49698:intron | 55.0% | |
| GGTGCAACCAGTAACGCGAA+TGG | + | chr4.4:8127766-8127785 | None:intergenic | 55.0% | |
| GGTGGAAAACGACAGCGTAC+CGG | - | chr4.4:8124269-8124288 | MS.gene49698:CDS | 55.0% | |
| TATGTCAGCCTTGGATGCCG+AGG | - | chr4.4:8126019-8126038 | MS.gene49698:CDS | 55.0% | |
| TCTGCCCATTTGACGCCTCA+GGG | + | chr4.4:8126592-8126611 | None:intergenic | 55.0% | |
| TGTTGAGGGAGCTGCTACAC+TGG | - | chr4.4:8126808-8126827 | MS.gene49698:intron | 55.0% | |
| ! | ACGGGTTACTTGGCTGGCAA+AGG | - | chr4.4:8126295-8126314 | MS.gene49698:CDS | 55.0% |
| ! | TGCAAAGTGCCCAGCATGGT+AGG | + | chr4.4:8128446-8128465 | None:intergenic | 55.0% |
| !! | GAAGGCACCATGAGAACCAG+TGG | + | chr4.4:8126972-8126991 | None:intergenic | 55.0% |
| !! | GGTGTTCCCACTGGTTCTCA+TGG | - | chr4.4:8126962-8126981 | MS.gene49698:intron | 55.0% |
| CAGGGTTTGGGTGTTCCCAC+TGG | - | chr4.4:8126953-8126972 | MS.gene49698:intron | 60.0% | |
| CAGTGGGAACACCCAAACCC+TGG | + | chr4.4:8126955-8126974 | None:intergenic | 60.0% | |
| GCTTCCTTGCCATCACCCCT+TGG | + | chr4.4:8126182-8126201 | None:intergenic | 60.0% | |
| ! | AGCACCAAGGGGTGATGGCA+AGG | - | chr4.4:8126175-8126194 | MS.gene49698:CDS | 60.0% |
| GGGAACACCCAAACCCTGGG+AGG | + | chr4.4:8126951-8126970 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8124267 | 8128491 | 8124267 | ID=MS.gene49698 |
| chr4.4 | mRNA | 8124267 | 8128491 | 8124267 | ID=MS.gene49698.t1;Parent=MS.gene49698 |
| chr4.4 | exon | 8128397 | 8128491 | 8128397 | ID=MS.gene49698.t1.exon1;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8128397 | 8128491 | 8128397 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| chr4.4 | exon | 8128201 | 8128292 | 8128201 | ID=MS.gene49698.t1.exon2;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8128201 | 8128292 | 8128201 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| chr4.4 | exon | 8127832 | 8127910 | 8127832 | ID=MS.gene49698.t1.exon3;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8127832 | 8127910 | 8127832 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| chr4.4 | exon | 8125908 | 8126766 | 8125908 | ID=MS.gene49698.t1.exon4;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8125908 | 8126766 | 8125908 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| chr4.4 | exon | 8125669 | 8125802 | 8125669 | ID=MS.gene49698.t1.exon5;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8125669 | 8125802 | 8125669 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| chr4.4 | exon | 8124267 | 8125113 | 8124267 | ID=MS.gene49698.t1.exon6;Parent=MS.gene49698.t1 |
| chr4.4 | CDS | 8124267 | 8125113 | 8124267 | ID=cds.MS.gene49698.t1;Parent=MS.gene49698.t1 |
| Gene Sequence |
| Protein sequence |
