AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49939

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49939.t1 MTR_6g086630 79.627 643 38 5 1 600 66 658 0.0 972
MS.gene49939.t1 MTR_8g103750 55.982 652 213 16 1 607 66 688 0.0 611
MS.gene49939.t1 MTR_8g103750 55.982 652 213 16 1 607 1 623 0.0 609
MS.gene49939.t1 MTR_1g010280 30.283 601 295 20 1 529 1 549 1.48e-52 191
MS.gene49939.t1 MTR_6g027300 39.583 192 91 6 1 174 65 249 1.61e-29 124
MS.gene49939.t1 MTR_6g027300 39.583 192 91 6 1 174 1 185 2.02e-29 123
MS.gene49939.t1 MTR_6g027300 39.583 192 91 6 1 174 65 249 2.15e-29 124
MS.gene49939.t1 MTR_6g027300 39.583 192 91 6 1 174 65 249 2.31e-29 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49939.t1 AT4G13350 40.351 627 264 17 1 607 66 602 4.06e-105 330
MS.gene49939.t1 AT4G13350 40.351 627 264 17 1 607 66 602 4.06e-105 330
MS.gene49939.t1 AT4G32630 29.366 647 335 30 1 606 62 627 1.13e-39 154
MS.gene49939.t1 AT4G32630 29.257 646 336 30 1 606 62 626 2.92e-39 153
MS.gene49939.t1 AT4G32630 29.257 646 336 30 1 606 62 626 2.92e-39 153
MS.gene49939.t1 AT4G32630 29.257 646 336 30 1 606 62 626 2.92e-39 153
MS.gene49939.t1 AT4G32630 29.257 646 336 30 1 606 62 626 2.92e-39 153
MS.gene49939.t1 AT4G32630 29.257 646 336 30 1 606 62 626 2.92e-39 153
MS.gene49939.t1 AT1G08680 46.667 105 55 1 1 104 66 170 9.80e-24 106
MS.gene49939.t1 AT1G08680 35.270 241 136 8 1 233 66 294 1.31e-23 105
MS.gene49939.t1 AT1G08680 46.667 105 55 1 1 104 66 170 1.35e-23 105
MS.gene49939.t1 AT1G08680 46.667 105 55 1 1 104 66 170 1.36e-23 105
MS.gene49939.t1 AT1G08680 46.667 105 55 1 1 104 66 170 1.67e-23 105

Find 227 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCTGTTAGAGATATTT+TGG 0.113010 6.4:+59354118 MS.gene49939:CDS
CTCTACTTGGCTTTCGTTAC+TGG 0.146357 6.4:-59354928 None:intergenic
CATACACTTGGGGCTTGATT+TGG 0.188678 6.4:-59356240 None:intergenic
ATACACTTGGGGCTTGATTT+GGG 0.205821 6.4:-59356239 None:intergenic
CAGGAGAGTTGAGGCATATC+AGG 0.233416 6.4:+59353842 MS.gene49939:CDS
GGAGTGGTTCCCGGCCTATC+AGG 0.277885 6.4:-59357320 None:intergenic
CCAGCAGCAGCTCCTAGTTT+TGG 0.290873 6.4:+59355295 MS.gene49939:CDS
TACTTTCCTGCTCCAGTTCA+AGG 0.301141 6.4:+59355869 MS.gene49939:CDS
CCACCCCTGCCATCCTTTCA+AGG 0.302420 6.4:+59356664 MS.gene49939:CDS
CCGAATGGATTCCCTCCTTT+GGG 0.307754 6.4:-59357359 None:intergenic
TTAGAGCTGGGAGTGGTTCC+CGG 0.312806 6.4:-59357329 None:intergenic
CTATCAGGCAGCTGCTGATT+TGG 0.325530 6.4:-59357305 None:intergenic
GACACACAGGAACGTCGTTT+TGG 0.325661 6.4:+59353891 MS.gene49939:CDS
TCTTTACCTTCTCATGTTCC+AGG 0.336334 6.4:+59355185 MS.gene49939:CDS
GAGAAAATGTAATACCTCTT+AGG 0.336552 6.4:+59354141 MS.gene49939:CDS
CCCGAATGGATTCCCTCCTT+TGG 0.337927 6.4:-59357360 None:intergenic
AGGCAAGGAGTTGGGAATTT+CGG 0.339840 6.4:+59357251 MS.gene49939:intron
AGTATCAGATGGAGATTATA+AGG 0.353912 6.4:+59354037 MS.gene49939:CDS
TCTCCCAAAATATCTCTAAC+AGG 0.355400 6.4:-59354122 None:intergenic
TTGGTGCCAGTAATGTTAAC+AGG 0.360040 6.4:+59353549 MS.gene49939:intron
ACTGTTGGAGCAACAGGTTC+AGG 0.363404 6.4:-59354996 None:intergenic
GCCCAGGTCTCTAGCTCGTT+CGG 0.369926 6.4:-59354075 None:intergenic
TTTGGGGAAGGGGTTAGAGC+TGG 0.369937 6.4:-59357342 None:intergenic
TGAGGAACTGTTGGAGCAAC+AGG 0.372048 6.4:-59355002 None:intergenic
CTGCCTAATGTACCACCTTC+AGG 0.373574 6.4:+59356691 MS.gene49939:CDS
GGATTTCCTGACTGCAAAAC+AGG 0.377480 6.4:-59355050 None:intergenic
TGGGATGGATTGCCTAGGTT+TGG 0.378442 6.4:-59356727 None:intergenic
GAAATCCCAGTGATGACAAT+TGG 0.385158 6.4:+59355066 MS.gene49939:CDS
CTAGGAGCTGCTGCTGGAAT+AGG 0.389666 6.4:-59355289 None:intergenic
CAAATCAGCAGCTGCCTGAT+AGG 0.391546 6.4:+59357306 MS.gene49939:CDS
AAGATTCCGACACGGACAAT+TGG 0.392823 6.4:-59355166 None:intergenic
CCCATTTGCCAACCTTGAAC+TGG 0.394548 6.4:-59355881 None:intergenic
GATCAAGAAAGTAGGCAATA+TGG 0.399904 6.4:+59353951 MS.gene49939:CDS
GTTTGTTAAGCATGTTTATG+AGG 0.401277 6.4:+59353580 MS.gene49939:CDS
CATTGTCCTACATTATTATG+AGG 0.408827 6.4:-59355367 None:intergenic
AACCGTGCAGTCTTCAACCC+TGG 0.409273 6.4:+59356618 MS.gene49939:intron
GATCGGCATCAAAATCAATA+AGG 0.413195 6.4:-59354974 None:intergenic
TTGAGGCACACTAGATTGTT+GGG 0.413764 6.4:-59355027 None:intergenic
CCCAGGTCTCTAGCTCGTTC+GGG 0.418011 6.4:-59354074 None:intergenic
CCAAAGGAGGGAATCCATTC+GGG 0.420807 6.4:+59357360 MS.gene49939:CDS
CCAGTTCAAGGTTGGCAAAT+GGG 0.424788 6.4:+59355881 MS.gene49939:CDS
GGATTCCCTCCTTTGGGGAA+GGG 0.425243 6.4:-59357353 None:intergenic
GTCCTCCAGTTGTCAATGAT+TGG 0.426864 6.4:+59353997 MS.gene49939:CDS
GCAAGTACTTACCTGCTGTC+AGG 0.428298 6.4:-59353468 None:intergenic
GTTGAGGCACACTAGATTGT+TGG 0.430065 6.4:-59355028 None:intergenic
ATGCCTGAAGGTGGTACATT+AGG 0.431901 6.4:-59356694 None:intergenic
GATGGATTGCCTAGGTTTGG+AGG 0.431975 6.4:-59356724 None:intergenic
CCCAAAGGAGGGAATCCATT+CGG 0.433525 6.4:+59357359 MS.gene49939:CDS
TTGGCAAATGGGTCCTCCGC+AGG 0.434161 6.4:+59355892 MS.gene49939:CDS
CTGTTAAAAGCCTCATTAGC+AGG 0.435777 6.4:-59355664 None:intergenic
TTGGGGAAGGGGTTAGAGCT+GGG 0.436834 6.4:-59357341 None:intergenic
TGTGTATCACCTTGGACTCC+TGG 0.438032 6.4:-59355203 None:intergenic
CTACTTTCTTGATCATATCC+AGG 0.438353 6.4:-59353942 None:intergenic
GATTCCCTCCTTTGGGGAAG+GGG 0.439278 6.4:-59357352 None:intergenic
GGAACTGAGGGAAACATGTT+CGG 0.441681 6.4:+59357272 MS.gene49939:CDS
AAGACGATTCCTATGAAAAC+AGG 0.449938 6.4:+59353823 MS.gene49939:CDS
AGAAGCCCAATTGTCATCAC+TGG 0.452119 6.4:-59355072 None:intergenic
GCATGTGGCATTGGTGCATT+CGG 0.453125 6.4:-59355622 None:intergenic
GTAATACCTCTTAGGATAAG+TGG 0.454550 6.4:+59354149 MS.gene49939:CDS
GGAAGTTCTGTTCTTCCACT+TGG 0.456507 6.4:-59355721 None:intergenic
TGACGATGGGGTTGGAGTCC+AGG 0.457193 6.4:-59356752 None:intergenic
TATGAGGATAGGAGATTCAC+TGG 0.458069 6.4:+59353596 MS.gene49939:CDS
TCCAGTTCAAGGTTGGCAAA+TGG 0.459544 6.4:+59355880 MS.gene49939:CDS
ATAGGAGATTCACTGGAGAT+AGG 0.463488 6.4:+59353603 MS.gene49939:CDS
TACACTTGGGGCTTGATTTG+GGG 0.463639 6.4:-59356238 None:intergenic
TGCCAACCTTGAACTGGAGC+AGG 0.464842 6.4:-59355875 None:intergenic
GGATTTAAATTTGAGGTGCT+TGG 0.465186 6.4:-59355125 None:intergenic
TGGATTCCCTCCTTTGGGGA+AGG 0.465352 6.4:-59357354 None:intergenic
TCATAATAATGTAGGACAAT+GGG 0.466865 6.4:+59355369 MS.gene49939:CDS
CAATGTGCAGGCAAGGAGTT+GGG 0.467253 6.4:+59357243 MS.gene49939:intron
GTTGGAGTCCAGGCATGGGA+TGG 0.467652 6.4:-59356742 None:intergenic
CGACGCCAATCATTGACAAC+TGG 0.467673 6.4:-59354002 None:intergenic
TAGGCAATCCATCCCATGCC+TGG 0.469752 6.4:+59356734 MS.gene49939:CDS
TCAGCAGCTGCCTGATAGGC+CGG 0.471517 6.4:+59357310 MS.gene49939:CDS
AGATTCCGACACGGACAATT+GGG 0.472985 6.4:-59355165 None:intergenic
ACTTCAAGAAGGAGGAAATC+AGG 0.479603 6.4:+59353293 MS.gene49939:CDS
TTCAAGCGGATTTAAATTTG+AGG 0.480362 6.4:-59355132 None:intergenic
TGATGGTATGCATGTGGCAT+TGG 0.480583 6.4:-59355631 None:intergenic
GCCACATTATTATATTGCAT+TGG 0.481046 6.4:-59355920 None:intergenic
GAAGGGGTTAGAGCTGGGAG+TGG 0.481281 6.4:-59357336 None:intergenic
AATGGATTTGTTGACCTTGA+CGG 0.485427 6.4:-59356195 None:intergenic
ACCTTCTGTACCCACAGGAC+AGG 0.486237 6.4:+59355594 MS.gene49939:CDS
AACTGCATCCTCTGGCAGCT+TGG 0.489875 6.4:+59354902 MS.gene49939:CDS
CTGAAGGTGGTACATTAGGC+AGG 0.490324 6.4:-59356690 None:intergenic
ATTGACAACTGGAGGACGAC+CGG 0.490377 6.4:-59353991 None:intergenic
TACATTATTATGAGGTGATA+CGG 0.491099 6.4:-59355359 None:intergenic
GGGTGGTGCTGTAAATAGTC+AGG 0.491868 6.4:+59355456 MS.gene49939:CDS
TCTCAAGTTTAATCTCTACT+TGG 0.492012 6.4:-59354941 None:intergenic
TGCCTCAAAGCCTGCTAATG+AGG 0.492851 6.4:+59355654 MS.gene49939:CDS
GTCATACGCTGGGCAGCAAA+TGG 0.493340 6.4:+59356890 MS.gene49939:CDS
AAATCCCAGTGATGACAATT+GGG 0.494998 6.4:+59355067 MS.gene49939:CDS
ATGGATTGCCTAGGTTTGGA+GGG 0.495740 6.4:-59356723 None:intergenic
AGAGAAATTTACCTTGGCAT+TGG 0.497729 6.4:-59356924 None:intergenic
CCCTGTCCTGTGGGTACAGA+AGG 0.497919 6.4:-59355595 None:intergenic
AGCCTCATTAGCAGGCTTTG+AGG 0.499841 6.4:-59355656 None:intergenic
TCCTGTGTGTCTTCGTATGG+AGG 0.503139 6.4:-59353879 None:intergenic
TTAAGCATGTTTATGAGGAT+AGG 0.505517 6.4:+59353585 MS.gene49939:CDS
AATTGTTGACTAGCAGAAGC+AGG 0.505821 6.4:-59355421 None:intergenic
TGTTGGGCTTGAGGAACTGT+TGG 0.505985 6.4:-59355011 None:intergenic
CCTTGAAAGGATGGCAGGGG+TGG 0.506197 6.4:-59356664 None:intergenic
CCAAAACTAGGAGCTGCTGC+TGG 0.507856 6.4:-59355295 None:intergenic
TGGTTGCGGATGCTGCAAAC+TGG 0.508220 6.4:-59355392 None:intergenic
AGTCCAGGTGGAAGAAGTCC+TGG 0.510458 6.4:+59353924 MS.gene49939:CDS
CAAGTACTTACCTGCTGTCA+GGG 0.511056 6.4:-59353467 None:intergenic
TACTTTCAGGGTCATACGCT+GGG 0.514743 6.4:+59356880 MS.gene49939:intron
TCAATGTGCAGGCAAGGAGT+TGG 0.515383 6.4:+59357242 MS.gene49939:intron
ATGGGGTTGGAGTCCAGGCA+TGG 0.516624 6.4:-59356747 None:intergenic
CGTTCCTGTGTGTCTTCGTA+TGG 0.519529 6.4:-59353882 None:intergenic
TGGGGTTGGAGTCCAGGCAT+GGG 0.524458 6.4:-59356746 None:intergenic
GGGAACCTTGAAAGGATGGC+AGG 0.524803 6.4:-59356669 None:intergenic
ACACTAGATTGTTGGGCTTG+AGG 0.528428 6.4:-59355020 None:intergenic
TCCTCTCGGTGGTTTGTCAG+AGG 0.529596 6.4:-59353627 None:intergenic
TGTTTACTGCTGACATCGAA+TGG 0.529956 6.4:-59356213 None:intergenic
TTTCAGAGAACTGCATCCTC+TGG 0.530588 6.4:+59354894 MS.gene49939:intron
GGTTTAACTTCTACAGCAGA+AGG 0.534195 6.4:-59355700 None:intergenic
TAGCAGGCTTTGAGGCATGA+TGG 0.534756 6.4:-59355648 None:intergenic
AGGGGTGGAGTCCATGCATG+TGG 0.538337 6.4:-59356649 None:intergenic
CCTTCTGTACCCACAGGACA+GGG 0.538600 6.4:+59355595 MS.gene49939:CDS
TTCCTGCTCCAGTTCAAGGT+TGG 0.540598 6.4:+59355873 MS.gene49939:CDS
GGCGATTATAAGAGAAGTCC+CGG 0.541192 6.4:+59353972 MS.gene49939:CDS
GGATGGCACTGAAGTGCCAC+TGG 0.541437 6.4:-59355338 None:intergenic
ATTAGGCAGGGAACCTTGAA+AGG 0.541766 6.4:-59356677 None:intergenic
CAGCAGCTGCCTGATAGGCC+GGG 0.542449 6.4:+59357311 MS.gene49939:CDS
GAAGCAGGGAACGTTGGTTG+CGG 0.544995 6.4:-59355406 None:intergenic
GTTGGGAATTTCGGAACTGA+GGG 0.545099 6.4:+59357260 MS.gene49939:CDS
CGGGTGGGCTTGAAGAGCCC+AGG 0.546386 6.4:-59354091 None:intergenic
GGCAGGGAACCTTGAAAGGA+TGG 0.546497 6.4:-59356673 None:intergenic
CCTGACTGCAAAACAGGTTG+AGG 0.547283 6.4:-59355044 None:intergenic
AATTCTTTACATTACCCGAA+TGG 0.547762 6.4:-59357374 None:intergenic
CTTGACGGCTGTGAATAACT+TGG 0.548241 6.4:-59356180 None:intergenic
ACCGTGCAGTCTTCAACCCT+GGG 0.549066 6.4:+59356619 MS.gene49939:intron
GCAATTCTTTCCCTGACAGC+AGG 0.550264 6.4:+59353457 MS.gene49939:CDS
CTGGATATGATCAAGAAAGT+AGG 0.553339 6.4:+59353943 MS.gene49939:CDS
CCTGTGTGTCTTCGTATGGA+GGG 0.554844 6.4:-59353878 None:intergenic
TTTGTCCCAATTGTCCGTGT+CGG 0.555220 6.4:+59355160 MS.gene49939:CDS
GTATCACCTCATAATAATGT+AGG 0.555607 6.4:+59355361 MS.gene49939:CDS
ATTCGGATGCCCCTGTCCTG+TGG 0.557545 6.4:-59355605 None:intergenic
TGGGTTATCCACCACATGCA+TGG 0.559865 6.4:+59356638 MS.gene49939:CDS
TTTGGTGACAGGTCTAGTCC+AGG 0.559940 6.4:+59353909 MS.gene49939:CDS
CTCATAATAATGTAGGACAA+TGG 0.560712 6.4:+59355368 MS.gene49939:CDS
TTCGGATGCCCCTGTCCTGT+GGG 0.563942 6.4:-59355604 None:intergenic
TCTCTAACAGGTCGGACCAC+GGG 0.565901 6.4:-59354110 None:intergenic
AGGCATGGGATGGATTGCCT+AGG 0.566462 6.4:-59356732 None:intergenic
ATGCATGTGGTGGATAACCC+AGG 0.569423 6.4:-59356636 None:intergenic
TTGACAACTGGAGGACGACC+GGG 0.570980 6.4:-59353990 None:intergenic
AAACATGCTTAACAAACTCT+CGG 0.571606 6.4:-59353574 None:intergenic
TCTAACCCCTTCCCCAAAGG+AGG 0.572129 6.4:+59357347 MS.gene49939:CDS
ATACTTTCAGGGTCATACGC+TGG 0.572536 6.4:+59356879 MS.gene49939:intron
GCATATGATGACGATGGGGT+TGG 0.573061 6.4:-59356760 None:intergenic
CTGTGTCAGTGATGAAGCAT+CGG 0.574879 6.4:-59354201 None:intergenic
TCTCATGTTCCAGGAGTCCA+AGG 0.576257 6.4:+59355194 MS.gene49939:CDS
TGGCAAATGGGTCCTCCGCA+GGG 0.576406 6.4:+59355893 MS.gene49939:CDS
GGGCTCTTCAAGCCCACCCG+TGG 0.576424 6.4:+59354094 MS.gene49939:CDS
TCAACAATTTCCACCGTCAG+TGG 0.578286 6.4:+59355435 MS.gene49939:CDS
GCTGAGAAATTGCCAAAACT+AGG 0.579045 6.4:-59355307 None:intergenic
GAAGATCGTAGAGTATCAGA+TGG 0.580894 6.4:+59354026 MS.gene49939:CDS
AGGAGAGTTGAGGCATATCA+GGG 0.582512 6.4:+59353843 MS.gene49939:CDS
GAACTGGAGCAGGAAAGTAC+TGG 0.583420 6.4:-59355865 None:intergenic
ATTTCCTCCTTCTTGAAGTG+CGG 0.583644 6.4:-59353289 None:intergenic
CTGATGCATATGATGACGAT+GGG 0.584853 6.4:-59356765 None:intergenic
ATCTCTAACAGGTCGGACCA+CGG 0.585179 6.4:-59354111 None:intergenic
TGGACTCCTGGAACATGAGA+AGG 0.585568 6.4:-59355191 None:intergenic
TTTCCGCTGTTTGGTTTGGG+GGG 0.588613 6.4:-59354173 None:intergenic
CGCCAATCATTGACAACTGG+AGG 0.591446 6.4:-59353999 None:intergenic
GGCTGTGAATAACTTGGCAC+AGG 0.592606 6.4:-59356174 None:intergenic
CGAATGGATTCCCTCCTTTG+GGG 0.593184 6.4:-59357358 None:intergenic
GGAACCTTGAAAGGATGGCA+GGG 0.595041 6.4:-59356668 None:intergenic
GGCACTGAAGTGCCACTGGG+TGG 0.595804 6.4:-59355334 None:intergenic
CCCGAACGAGCTAGAGACCT+GGG 0.598543 6.4:+59354074 MS.gene49939:CDS
AGCTCTAACCCCTTCCCCAA+AGG 0.598694 6.4:+59357344 MS.gene49939:CDS
GCTGTAGAAGTTAAACCAAG+TGG 0.599496 6.4:+59355706 MS.gene49939:CDS
TCCAATGCAATATAATAATG+TGG 0.602071 6.4:+59355919 MS.gene49939:CDS
GGTGGAGTCCATGCATGTGG+TGG 0.602942 6.4:-59356646 None:intergenic
TAACAGGTCGGACCACGGGT+GGG 0.604829 6.4:-59354106 None:intergenic
AATCTTACGACCTTTCCTCT+CGG 0.609041 6.4:-59353641 None:intergenic
TCCCGAACGAGCTAGAGACC+TGG 0.613069 6.4:+59354073 MS.gene49939:CDS
TATCCAGGACTTCTTCCACC+TGG 0.614393 6.4:-59353927 None:intergenic
TGCATTGGAAAGCCCTGCGG+AGG 0.614805 6.4:-59355905 None:intergenic
CTAACAGGTCGGACCACGGG+TGG 0.615242 6.4:-59354107 None:intergenic
GAAGTTACCGCACTTCAAGA+AGG 0.615478 6.4:+59353282 MS.gene49939:CDS
CCAAAATATCTCTAACAGGT+CGG 0.617155 6.4:-59354118 None:intergenic
ATTACGCACCCTCCAAACCT+AGG 0.617252 6.4:+59356715 MS.gene49939:CDS
TTCTCAGCTTTCCCACCCAG+TGG 0.617961 6.4:+59355322 MS.gene49939:CDS
CGATGCTTCATCACTGACAC+AGG 0.618098 6.4:+59354202 MS.gene49939:CDS
CTAGCAGAAGCAGGGAACGT+TGG 0.618799 6.4:-59355412 None:intergenic
AGTTGGGAATTTCGGAACTG+AGG 0.619777 6.4:+59357259 MS.gene49939:CDS
CTTACGACCTTTCCTCTCGG+TGG 0.622626 6.4:-59353638 None:intergenic
TGGAGCAACAGGTTCAGGAT+CGG 0.626425 6.4:-59354991 None:intergenic
TGACAAACCACCGAGAGGAA+AGG 0.627098 6.4:+59353631 MS.gene49939:CDS
GAAGCCCAATTGTCATCACT+GGG 0.627573 6.4:-59355071 None:intergenic
CATGCACCTTCTGTACCCAC+AGG 0.628811 6.4:+59355589 MS.gene49939:CDS
CAAGTTATTCACAGCCGTCA+AGG 0.628835 6.4:+59356181 MS.gene49939:CDS
CAACAATTTCCACCGTCAGT+GGG 0.629584 6.4:+59355436 MS.gene49939:CDS
TCATATGCATCAGTCCCACC+AGG 0.629975 6.4:+59356775 MS.gene49939:CDS
CTAACCCCTTCCCCAAAGGA+GGG 0.631904 6.4:+59357348 MS.gene49939:CDS
CAACTAATATACCAATGCCA+AGG 0.633465 6.4:+59356913 MS.gene49939:CDS
ATCAGATGGAGATTATAAGG+TGG 0.635684 6.4:+59354040 MS.gene49939:CDS
GGAGGGTGCGTAATGCCTGA+AGG 0.636832 6.4:-59356706 None:intergenic
TGAAGGTGGTACATTAGGCA+GGG 0.636868 6.4:-59356689 None:intergenic
CTATGAAAACAGGAGAGTTG+AGG 0.640259 6.4:+59353833 MS.gene49939:CDS
GAACCTTGAAAGGATGGCAG+GGG 0.640950 6.4:-59356667 None:intergenic
TGGGACAAAACAGATTCAAG+CGG 0.641329 6.4:-59355146 None:intergenic
CCCTCCATACGAAGACACAC+AGG 0.642212 6.4:+59353878 MS.gene49939:CDS
TTGAAAGTCACATACACTTG+GGG 0.645670 6.4:-59356250 None:intergenic
CAATTTCCACCGTCAGTGGG+TGG 0.648109 6.4:+59355439 MS.gene49939:CDS
TTATTATGAGGTGATACGGA+TGG 0.654263 6.4:-59355355 None:intergenic
ATTGTTGACTAGCAGAAGCA+GGG 0.663307 6.4:-59355420 None:intergenic
ACAGGATAAACATACCTGGT+GGG 0.664986 6.4:-59356789 None:intergenic
GGTACAGAAGGTGCATGCAA+TGG 0.666830 6.4:-59355583 None:intergenic
ACTGGATACCAAGCTGCCAG+AGG 0.668169 6.4:-59354910 None:intergenic
GTTACCGCACTTCAAGAAGG+AGG 0.668810 6.4:+59353285 MS.gene49939:CDS
TTTACAGCACCACCCACTGA+CGG 0.672082 6.4:-59355448 None:intergenic
GGTGACAGGTCTAGTCCAGG+TGG 0.688275 6.4:+59353912 MS.gene49939:CDS
GATGGCACTGAAGTGCCACT+GGG 0.689606 6.4:-59355337 None:intergenic
ACAGCACCACCCACTGACGG+TGG 0.689920 6.4:-59355445 None:intergenic
AATGCAATATAATAATGTGG+CGG 0.690651 6.4:+59355922 MS.gene49939:CDS
GCACTGAAGTGCCACTGGGT+GGG 0.693382 6.4:-59355333 None:intergenic
GGGTGCGTAATGCCTGAAGG+TGG 0.694127 6.4:-59356703 None:intergenic
ACTGATGCATATGATGACGA+TGG 0.699854 6.4:-59356766 None:intergenic
TATTGCATTGGAAAGCCCTG+CGG 0.701173 6.4:-59355908 None:intergenic
TGCATGTGGTGGATAACCCA+GGG 0.705185 6.4:-59356635 None:intergenic
ACCTCTGACAAACCACCGAG+AGG 0.706606 6.4:+59353626 MS.gene49939:CDS
GAGGCATGATGGTATGCATG+TGG 0.707104 6.4:-59355637 None:intergenic
CTTCTGTACCCACAGGACAG+GGG 0.715786 6.4:+59355596 MS.gene49939:CDS
AGAGTTGAGGCATATCAGGG+AGG 0.741370 6.4:+59353846 MS.gene49939:CDS
AGAAGGTAAAGATTCCGACA+CGG 0.756226 6.4:-59355174 None:intergenic
TGATGCATATGATGACGATG+GGG 0.769784 6.4:-59356764 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACAGTAAATTAAAAA+CGG - chr6.4:59354702-59354721 None:intergenic 10.0%
!!! AACTTTTTATTAAATAGAAT+AGG - chr6.4:59354379-59354398 None:intergenic 10.0%
!!! TTCTTTTTAATTAAAAAGAA+AGG - chr6.4:59356072-59356053 None:intergenic 10.0%
!! TTATGATTAATAATCATAGA+GGG + chr6.4:59356027-59356046 MS.gene49939:intron 15.0%
!!! AAGAGATTTATTTTAAAGAA+TGG + chr6.4:59353424-59353443 MS.gene49939:CDS 15.0%
!!! AGAGATTTATTTTAAAGAAT+GGG + chr6.4:59353425-59353444 MS.gene49939:CDS 15.0%
!!! TAAAATTGATGATAATAGAT+TGG + chr6.4:59357182-59357201 MS.gene49939:intron 15.0%
!! ACAAATTAAAAACATGCATT+TGG - chr6.4:59356100-59356119 None:intergenic 20.0%
!! ATAAAAAGTTGAATTTCAGA+TGG + chr6.4:59354389-59354408 MS.gene49939:intron 20.0%
!! CTCTATGATTATTAATCATA+AGG - chr6.4:59356028-59356047 None:intergenic 20.0%
!! CTTATGATTAATAATCATAG+AGG + chr6.4:59356026-59356045 MS.gene49939:intron 20.0%
!! GTAAAATATTGTTTAGCTAA+TGG + chr6.4:59355500-59355519 MS.gene49939:intron 20.0%
!!! AAATGCATGTTTTTAATTTG+TGG + chr6.4:59356099-59356118 MS.gene49939:intron 20.0%
!!! ATTATTAATCATAAGGTGTT+TGG - chr6.4:59356021-59356040 None:intergenic 20.0%
!!! TACATTTTAAAATGGCAATA+TGG - chr6.4:59354253-59354272 None:intergenic 20.0%
!!! TGGGATATTTTATTTATGAA+TGG + chr6.4:59354511-59354530 MS.gene49939:intron 20.0%
!!! TTTTTTTACATGCTATTCAT+TGG + chr6.4:59356442-59356461 MS.gene49939:intron 20.0%
! AAGCAGAATGAAAAGAAATA+TGG - chr6.4:59353348-59353367 None:intergenic 25.0%
! AATGCAATATAATAATGTGG+CGG + chr6.4:59355922-59355941 MS.gene49939:CDS 25.0%
! ATCATTCTGATTGTCATATT+TGG + chr6.4:59353530-59353549 MS.gene49939:intron 25.0%
! ATGTGACTTTCAATGATTTA+TGG + chr6.4:59356260-59356279 MS.gene49939:intron 25.0%
! ATTAACTGACGAATATTAAC+AGG - chr6.4:59356810-59356829 None:intergenic 25.0%
! TAAATAATGAATCAACCTCA+CGG - chr6.4:59354563-59354582 None:intergenic 25.0%
! TACATTATTATGAGGTGATA+CGG - chr6.4:59355362-59355381 None:intergenic 25.0%
! TCATAATAATGTAGGACAAT+GGG + chr6.4:59355369-59355388 MS.gene49939:CDS 25.0%
! TCCAATGCAATATAATAATG+TGG + chr6.4:59355919-59355938 MS.gene49939:CDS 25.0%
! TTTCTTAAAAAAGTGAATCC+TGG - chr6.4:59353674-59353693 None:intergenic 25.0%
!! ATTTTACATGACAAGTTCAT+TGG - chr6.4:59355487-59355506 None:intergenic 25.0%
!! CATTTGTCATTTACTTTGTT+TGG + chr6.4:59354772-59354791 MS.gene49939:intron 25.0%
!!! ATAATGATAGCATTAGCTTT+TGG + chr6.4:59354491-59354510 MS.gene49939:intron 25.0%
!!! TAATGATAGCATTAGCTTTT+GGG + chr6.4:59354492-59354511 MS.gene49939:intron 25.0%
!!! TTATGTTTTCTTTTAAGACG+TGG + chr6.4:59354744-59354763 MS.gene49939:intron 25.0%
AAACATGCTTAACAAACTCT+CGG - chr6.4:59353577-59353596 None:intergenic 30.0%
AAGATATTAACTCAATGTGC+AGG + chr6.4:59357231-59357250 MS.gene49939:intron 30.0%
AATGCAAGATGCTAACTTTA+TGG - chr6.4:59356316-59356335 None:intergenic 30.0%
AGAACAGACTAAGTAAGAAT+TGG - chr6.4:59353775-59353794 None:intergenic 30.0%
AGGTGATACACATATTGTAA+TGG + chr6.4:59355214-59355233 MS.gene49939:intron 30.0%
AGTATCAGATGGAGATTATA+AGG + chr6.4:59354037-59354056 MS.gene49939:CDS 30.0%
ATCGCAATATTTCAAAAGCT+AGG - chr6.4:59357135-59357154 None:intergenic 30.0%
ATGTATGGGAAATTAGATGA+AGG - chr6.4:59357037-59357056 None:intergenic 30.0%
ATTAACAGGATAAACATACC+TGG - chr6.4:59356796-59356815 None:intergenic 30.0%
ATTGAAAGTCACATACACTT+GGG - chr6.4:59356254-59356273 None:intergenic 30.0%
CATTGTCCTACATTATTATG+AGG - chr6.4:59355370-59355389 None:intergenic 30.0%
CTAATTGTTAGCCAAACAAT+AGG - chr6.4:59355810-59355829 None:intergenic 30.0%
CTCATAATAATGTAGGACAA+TGG + chr6.4:59355368-59355387 MS.gene49939:CDS 30.0%
GAACCATGTTAATACTTTCA+GGG + chr6.4:59356868-59356887 MS.gene49939:intron 30.0%
GAGAAAATGTAATACCTCTT+AGG + chr6.4:59354141-59354160 MS.gene49939:CDS 30.0%
GATTGAAGAGAAATTTACCT+TGG - chr6.4:59356933-59356952 None:intergenic 30.0%
GCCACATTATTATATTGCAT+TGG - chr6.4:59355923-59355942 None:intergenic 30.0%
GTATCACCTCATAATAATGT+AGG + chr6.4:59355361-59355380 MS.gene49939:CDS 30.0%
GTATTAATTTCACTCTGTTC+TGG + chr6.4:59355547-59355566 MS.gene49939:intron 30.0%
TAGCATGAACTTCAATGATA+CGG + chr6.4:59357063-59357082 MS.gene49939:intron 30.0%
TCTCAAGTTTAATCTCTACT+TGG - chr6.4:59354944-59354963 None:intergenic 30.0%
TCTGCAACTATACATGAAAA+CGG - chr6.4:59353498-59353517 None:intergenic 30.0%
TGAACCATGTTAATACTTTC+AGG + chr6.4:59356867-59356886 MS.gene49939:intron 30.0%
TTAAAAAAGTGAATCCTGGA+GGG - chr6.4:59353670-59353689 None:intergenic 30.0%
TTAAGCATGTTTATGAGGAT+AGG + chr6.4:59353585-59353604 MS.gene49939:CDS 30.0%
TTACAATATGTGTATCACCT+TGG - chr6.4:59355214-59355233 None:intergenic 30.0%
! GATGTTTTCAGTTATTCCTT+TGG + chr6.4:59354644-59354663 MS.gene49939:intron 30.0%
! GCTATTCATTGGTTAATTCA+CGG + chr6.4:59356453-59356472 MS.gene49939:intron 30.0%
! GTTTGTTAAGCATGTTTATG+AGG + chr6.4:59353580-59353599 MS.gene49939:CDS 30.0%
! TTCAAGCGGATTTAAATTTG+AGG - chr6.4:59355135-59355154 None:intergenic 30.0%
!! TGAAAGTATTAACATGGTTC+AGG - chr6.4:59356868-59356887 None:intergenic 30.0%
!!! AGCTTTTGAAATATTGCGAT+GGG + chr6.4:59357135-59357154 MS.gene49939:intron 30.0%
!!! TAGCTTTTGAAATATTGCGA+TGG + chr6.4:59357134-59357153 MS.gene49939:intron 30.0%
AAACGCATACTAAGACAATC+TGG - chr6.4:59355977-59355996 None:intergenic 35.0%
AAATCCCAGTGATGACAATT+GGG + chr6.4:59355067-59355086 MS.gene49939:CDS 35.0%
AAGACGATTCCTATGAAAAC+AGG + chr6.4:59353823-59353842 MS.gene49939:CDS 35.0%
ACTTGCATATGCCTATTGTT+TGG + chr6.4:59355796-59355815 MS.gene49939:intron 35.0%
AGAGAAATTTACCTTGGCAT+TGG - chr6.4:59356927-59356946 None:intergenic 35.0%
AGATTGTCTTAGTATGCGTT+TGG + chr6.4:59355976-59355995 MS.gene49939:intron 35.0%
ATAGAATAGGCCATTATGAG+TGG - chr6.4:59354366-59354385 None:intergenic 35.0%
ATCAGATGGAGATTATAAGG+TGG + chr6.4:59354040-59354059 MS.gene49939:CDS 35.0%
ATCTGGTAAGCTAATCATTC+TGG - chr6.4:59355960-59355979 None:intergenic 35.0%
CAACTAATATACCAATGCCA+AGG + chr6.4:59356913-59356932 MS.gene49939:CDS 35.0%
CATTGAAAGTCACATACACT+TGG - chr6.4:59356255-59356274 None:intergenic 35.0%
CCAAAATATCTCTAACAGGT+CGG - chr6.4:59354121-59354140 None:intergenic 35.0%
CTACTTTCTTGATCATATCC+AGG - chr6.4:59353945-59353964 None:intergenic 35.0%
CTGATAAAAAGCAAACGACT+AGG - chr6.4:59356842-59356861 None:intergenic 35.0%
CTGGATATGATCAAGAAAGT+AGG + chr6.4:59353943-59353962 MS.gene49939:CDS 35.0%
CTTAAAAAAGTGAATCCTGG+AGG - chr6.4:59353671-59353690 None:intergenic 35.0%
CTTCTTCGAAACTCGTATTT+GGG + chr6.4:59357005-59357024 MS.gene49939:intron 35.0%
GAAACATCTCTAATGTCCAA+AGG - chr6.4:59354663-59354682 None:intergenic 35.0%
GATCAAGAAAGTAGGCAATA+TGG + chr6.4:59353951-59353970 MS.gene49939:CDS 35.0%
GATCGGCATCAAAATCAATA+AGG - chr6.4:59354977-59354996 None:intergenic 35.0%
GGCTAACAATTAGTTGTGAT+TGG + chr6.4:59355817-59355836 MS.gene49939:intron 35.0%
GTAATACCTCTTAGGATAAG+TGG + chr6.4:59354149-59354168 MS.gene49939:CDS 35.0%
GTTAGCATCTTGCATTTAAC+AGG + chr6.4:59356320-59356339 MS.gene49939:intron 35.0%
TAAGTAGTCACGATTACTTC+AGG - chr6.4:59355745-59355764 None:intergenic 35.0%
TCACGGAAAAGATTAAGACT+CGG - chr6.4:59354546-59354565 None:intergenic 35.0%
TCTCCCAAAATATCTCTAAC+AGG - chr6.4:59354125-59354144 None:intergenic 35.0%
TTATTATGAGGTGATACGGA+TGG - chr6.4:59355358-59355377 None:intergenic 35.0%
TTGAAAGTCACATACACTTG+GGG - chr6.4:59356253-59356272 None:intergenic 35.0%
! CGACCTGTTAGAGATATTTT+GGG + chr6.4:59354119-59354138 MS.gene49939:CDS 35.0%
! GGATTTAAATTTGAGGTGCT+TGG - chr6.4:59355128-59355147 None:intergenic 35.0%
! GTTCCAACCTTTTCAATGAT+GGG - chr6.4:59356403-59356422 None:intergenic 35.0%
! TCACGGTATATTGTTTCTCT+TGG + chr6.4:59356470-59356489 MS.gene49939:intron 35.0%
! TGTTCCAACCTTTTCAATGA+TGG - chr6.4:59356404-59356423 None:intergenic 35.0%
!! AATGGATTTGTTGACCTTGA+CGG - chr6.4:59356198-59356217 None:intergenic 35.0%
!! TGACCCTGAAAGTATTAACA+TGG - chr6.4:59356874-59356893 None:intergenic 35.0%
!! TTCTTTTGATGTTGCTTCTG+AGG + chr6.4:59355091-59355110 MS.gene49939:CDS 35.0%
AACAGGATAAACATACCTGG+TGG - chr6.4:59356793-59356812 None:intergenic 40.0%
AATCTTACGACCTTTCCTCT+CGG - chr6.4:59353644-59353663 None:intergenic 40.0%
ACAGGATAAACATACCTGGT+GGG - chr6.4:59356792-59356811 None:intergenic 40.0%
ACTTCAAGAAGGAGGAAATC+AGG + chr6.4:59353293-59353312 MS.gene49939:CDS 40.0%
AGAAGGTAAAGATTCCGACA+CGG - chr6.4:59355177-59355196 None:intergenic 40.0%
ATACACTTGGGGCTTGATTT+GGG - chr6.4:59356242-59356261 None:intergenic 40.0%
ATAGGAGATTCACTGGAGAT+AGG + chr6.4:59353603-59353622 MS.gene49939:CDS 40.0%
ATGCTCTCCCATCATTGAAA+AGG + chr6.4:59356393-59356412 MS.gene49939:intron 40.0%
ATTAACTCAATGTGCAGGCA+AGG + chr6.4:59357236-59357255 MS.gene49939:intron 40.0%
ATTTCCTCCTTCTTGAAGTG+CGG - chr6.4:59353292-59353311 None:intergenic 40.0%
CAATTAGTTGTGATTGGTGC+AGG + chr6.4:59355823-59355842 MS.gene49939:intron 40.0%
CACGGAAAAGATTAAGACTC+GGG - chr6.4:59354545-59354564 None:intergenic 40.0%
CAGCTTCGATCAAGAATACA+AGG - chr6.4:59354625-59354644 None:intergenic 40.0%
CTATGAAAACAGGAGAGTTG+AGG + chr6.4:59353833-59353852 MS.gene49939:CDS 40.0%
CTGTTAAAAGCCTCATTAGC+AGG - chr6.4:59355667-59355686 None:intergenic 40.0%
GAAATCCCAGTGATGACAAT+TGG + chr6.4:59355066-59355085 MS.gene49939:CDS 40.0%
GCTGAGAAATTGCCAAAACT+AGG - chr6.4:59355310-59355329 None:intergenic 40.0%
GCTGTAGAAGTTAAACCAAG+TGG + chr6.4:59355706-59355725 MS.gene49939:CDS 40.0%
GCTTCTTCGAAACTCGTATT+TGG + chr6.4:59357004-59357023 MS.gene49939:intron 40.0%
GTGCTGTAAATAGTCAGGTT+TGG + chr6.4:59355461-59355480 MS.gene49939:intron 40.0%
GTTCTAATACCGTGTCATGA+AGG - chr6.4:59354309-59354328 None:intergenic 40.0%
TAAGCTTAAACAGCATGCAC+AGG - chr6.4:59356972-59356991 None:intergenic 40.0%
TATGAGGATAGGAGATTCAC+TGG + chr6.4:59353596-59353615 MS.gene49939:CDS 40.0%
TCATGCTATGCAGCATGTAT+GGG - chr6.4:59357051-59357070 None:intergenic 40.0%
TCTCCCATCATTGAAAAGGT+TGG + chr6.4:59356397-59356416 MS.gene49939:intron 40.0%
TCTGTCTTTGCCACTCATAA+TGG + chr6.4:59354353-59354372 MS.gene49939:intron 40.0%
TCTTTACCTTCTCATGTTCC+AGG + chr6.4:59355185-59355204 MS.gene49939:CDS 40.0%
TGGGACAAAACAGATTCAAG+CGG - chr6.4:59355149-59355168 None:intergenic 40.0%
TGTTTACTGCTGACATCGAA+TGG - chr6.4:59356216-59356235 None:intergenic 40.0%
TTCATGCTATGCAGCATGTA+TGG - chr6.4:59357052-59357071 None:intergenic 40.0%
TTGAGGCACACTAGATTGTT+GGG - chr6.4:59355030-59355049 None:intergenic 40.0%
! AATTGTTGACTAGCAGAAGC+AGG - chr6.4:59355424-59355443 None:intergenic 40.0%
! ACTGATGCATATGATGACGA+TGG - chr6.4:59356769-59356788 None:intergenic 40.0%
! ATTGTTGACTAGCAGAAGCA+GGG - chr6.4:59355423-59355442 None:intergenic 40.0%
! CCGACCTGTTAGAGATATTT+TGG + chr6.4:59354118-59354137 MS.gene49939:CDS 40.0%
! CTCAACTCTCCTGTTTTCAT+AGG - chr6.4:59353835-59353854 None:intergenic 40.0%
! CTGATGCATATGATGACGAT+GGG - chr6.4:59356768-59356787 None:intergenic 40.0%
! CTTGTGTTGTGTGTTGTTCA+GGG + chr6.4:59353795-59353814 MS.gene49939:intron 40.0%
! GAAGATCGTAGAGTATCAGA+TGG + chr6.4:59354026-59354045 MS.gene49939:CDS 40.0%
! GACTCATCTGTTTTATCTGC+AGG + chr6.4:59355265-59355284 MS.gene49939:intron 40.0%
! GAGTCTTAATCTTTTCCGTG+AGG + chr6.4:59354545-59354564 MS.gene49939:intron 40.0%
! GGTTTAACTTCTACAGCAGA+AGG - chr6.4:59355703-59355722 None:intergenic 40.0%
! TCTTGTGTTGTGTGTTGTTC+AGG + chr6.4:59353794-59353813 MS.gene49939:intron 40.0%
! TGATGCATATGATGACGATG+GGG - chr6.4:59356767-59356786 None:intergenic 40.0%
!! TTGGTGCCAGTAATGTTAAC+AGG + chr6.4:59353549-59353568 MS.gene49939:intron 40.0%
AAGATTCCGACACGGACAAT+TGG - chr6.4:59355169-59355188 None:intergenic 45.0%
ACACTAGATTGTTGGGCTTG+AGG - chr6.4:59355023-59355042 None:intergenic 45.0%
AGAAGCCCAATTGTCATCAC+TGG - chr6.4:59355075-59355094 None:intergenic 45.0%
AGAGCAGTTCATTGCATGCA+TGG + chr6.4:59356572-59356591 MS.gene49939:intron 45.0%
AGATTCCGACACGGACAATT+GGG - chr6.4:59355168-59355187 None:intergenic 45.0%
AGGAGAGTTGAGGCATATCA+GGG + chr6.4:59353843-59353862 MS.gene49939:CDS 45.0%
ATACTTTCAGGGTCATACGC+TGG + chr6.4:59356879-59356898 MS.gene49939:intron 45.0%
ATGCATGCAATGAACTGCTC+TGG - chr6.4:59356573-59356592 None:intergenic 45.0%
ATGCCTGAAGGTGGTACATT+AGG - chr6.4:59356697-59356716 None:intergenic 45.0%
ATTAGGCAGGGAACCTTGAA+AGG - chr6.4:59356680-59356699 None:intergenic 45.0%
CAACAATTTCCACCGTCAGT+GGG + chr6.4:59355436-59355455 MS.gene49939:CDS 45.0%
CAAGTACTTACCTGCTGTCA+GGG - chr6.4:59353470-59353489 None:intergenic 45.0%
CAAGTTATTCACAGCCGTCA+AGG + chr6.4:59356181-59356200 MS.gene49939:CDS 45.0%
CATACACTTGGGGCTTGATT+TGG - chr6.4:59356243-59356262 None:intergenic 45.0%
CCAGTTCAAGGTTGGCAAAT+GGG + chr6.4:59355881-59355900 MS.gene49939:CDS 45.0%
CTGTGTCAGTGATGAAGCAT+CGG - chr6.4:59354204-59354223 None:intergenic 45.0%
CTTGACGGCTGTGAATAACT+TGG - chr6.4:59356183-59356202 None:intergenic 45.0%
GAAGCCCAATTGTCATCACT+GGG - chr6.4:59355074-59355093 None:intergenic 45.0%
GAAGTTACCGCACTTCAAGA+AGG + chr6.4:59353282-59353301 MS.gene49939:CDS 45.0%
GGAACTGAGGGAAACATGTT+CGG + chr6.4:59357272-59357291 MS.gene49939:CDS 45.0%
GGAAGTTCTGTTCTTCCACT+TGG - chr6.4:59355724-59355743 None:intergenic 45.0%
GGATTTCCTGACTGCAAAAC+AGG - chr6.4:59355053-59355072 None:intergenic 45.0%
GGCGATTATAAGAGAAGTCC+CGG + chr6.4:59353972-59353991 MS.gene49939:CDS 45.0%
GTCCTCCAGTTGTCAATGAT+TGG + chr6.4:59353997-59354016 MS.gene49939:CDS 45.0%
GTTGAGGCACACTAGATTGT+TGG - chr6.4:59355031-59355050 None:intergenic 45.0%
TACTTTCAGGGTCATACGCT+GGG + chr6.4:59356880-59356899 MS.gene49939:intron 45.0%
TACTTTCCTGCTCCAGTTCA+AGG + chr6.4:59355869-59355888 MS.gene49939:CDS 45.0%
TATTGCATTGGAAAGCCCTG+CGG - chr6.4:59355911-59355930 None:intergenic 45.0%
TCAACAATTTCCACCGTCAG+TGG + chr6.4:59355435-59355454 MS.gene49939:CDS 45.0%
TCCAGTTCAAGGTTGGCAAA+TGG + chr6.4:59355880-59355899 MS.gene49939:CDS 45.0%
TCGGAGCCTGTTAACATTAC+TGG - chr6.4:59353558-59353577 None:intergenic 45.0%
TCTCATCTCCCTCTTTAGTG+AGG + chr6.4:59354818-59354837 MS.gene49939:intron 45.0%
TGAAGGTGGTACATTAGGCA+GGG - chr6.4:59356692-59356711 None:intergenic 45.0%
TGATGGTATGCATGTGGCAT+TGG - chr6.4:59355634-59355653 None:intergenic 45.0%
TGTGTTCAGCCTTCATGACA+CGG + chr6.4:59354297-59354316 MS.gene49939:intron 45.0%
TTTCAGAGAACTGCATCCTC+TGG + chr6.4:59354894-59354913 MS.gene49939:intron 45.0%
TTTGTCCCAATTGTCCGTGT+CGG + chr6.4:59355160-59355179 MS.gene49939:CDS 45.0%
! AGCTTTTCCGCTGTTTGGTT+TGG - chr6.4:59354180-59354199 None:intergenic 45.0%
! ATGGATTGCCTAGGTTTGGA+GGG - chr6.4:59356726-59356745 None:intergenic 45.0%
! CTCTACTTGGCTTTCGTTAC+TGG - chr6.4:59354931-59354950 None:intergenic 45.0%
! GTCGTAAGATTTTACCCTCC+AGG + chr6.4:59353653-59353672 MS.gene49939:intron 45.0%
! TACACTTGGGGCTTGATTTG+GGG - chr6.4:59356241-59356260 None:intergenic 45.0%
!! GCTTTTCCGCTGTTTGGTTT+GGG - chr6.4:59354179-59354198 None:intergenic 45.0%
!! GGCACGAGTTTTAGCACAAA+AGG - chr6.4:59353327-59353346 None:intergenic 45.0%
!!! CTTTTCCGCTGTTTGGTTTG+GGG - chr6.4:59354178-59354197 None:intergenic 45.0%
!!! TTTTCCGCTGTTTGGTTTGG+GGG - chr6.4:59354177-59354196 None:intergenic 45.0%
!!! TTTTATATTACATTTTAAAA+TGG - chr6.4:59354261-59354280 None:intergenic 5.0%
ACTCAGCCACCTCACTAAAG+AGG - chr6.4:59354830-59354849 None:intergenic 50.0%
ACTGTTGGAGCAACAGGTTC+AGG - chr6.4:59354999-59355018 None:intergenic 50.0%
AGAGTTGAGGCATATCAGGG+AGG + chr6.4:59353846-59353865 MS.gene49939:CDS 50.0%
AGCCTCATTAGCAGGCTTTG+AGG - chr6.4:59355659-59355678 None:intergenic 50.0%
ATCTCTAACAGGTCGGACCA+CGG - chr6.4:59354114-59354133 None:intergenic 50.0%
ATGCCGACATGCTCTTCTTG+AGG + chr6.4:59354438-59354457 MS.gene49939:intron 50.0%
ATTACGCACCCTCCAAACCT+AGG + chr6.4:59356715-59356734 MS.gene49939:CDS 50.0%
ATTGACAACTGGAGGACGAC+CGG - chr6.4:59353994-59354013 None:intergenic 50.0%
CAAATCAGCAGCTGCCTGAT+AGG + chr6.4:59357306-59357325 MS.gene49939:CDS 50.0%
CAGGAGAGTTGAGGCATATC+AGG + chr6.4:59353842-59353861 MS.gene49939:CDS 50.0%
CATCTCCCTCTTTAGTGAGG+TGG + chr6.4:59354821-59354840 MS.gene49939:intron 50.0%
CCAAAGGAGGGAATCCATTC+GGG + chr6.4:59357360-59357379 MS.gene49939:CDS 50.0%
CCCAAAGGAGGGAATCCATT+CGG + chr6.4:59357359-59357378 MS.gene49939:CDS 50.0%
CCCATTTGCCAACCTTGAAC+TGG - chr6.4:59355884-59355903 None:intergenic 50.0%
CCTGACTGCAAAACAGGTTG+AGG - chr6.4:59355047-59355066 None:intergenic 50.0%
CCTGTGTGTCTTCGTATGGA+GGG - chr6.4:59353881-59353900 None:intergenic 50.0%
CCTTCCATGTCTTCCTTGCA+CGG + chr6.4:59356502-59356521 MS.gene49939:intron 50.0%
CGACGCCAATCATTGACAAC+TGG - chr6.4:59354005-59354024 None:intergenic 50.0%
CGATGCTTCATCACTGACAC+AGG + chr6.4:59354202-59354221 MS.gene49939:CDS 50.0%
CGCCAATCATTGACAACTGG+AGG - chr6.4:59354002-59354021 None:intergenic 50.0%
CGTTCCTGTGTGTCTTCGTA+TGG - chr6.4:59353885-59353904 None:intergenic 50.0%
CTCAGCCACCTCACTAAAGA+GGG - chr6.4:59354829-59354848 None:intergenic 50.0%
CTGAAGGTGGTACATTAGGC+AGG - chr6.4:59356693-59356712 None:intergenic 50.0%
CTGCCTAATGTACCACCTTC+AGG + chr6.4:59356691-59356710 MS.gene49939:CDS 50.0%
GAACCTTGAAAGGATGGCAG+GGG - chr6.4:59356670-59356689 None:intergenic 50.0%
GAGGCATGATGGTATGCATG+TGG - chr6.4:59355640-59355659 None:intergenic 50.0%
GCAAGTACTTACCTGCTGTC+AGG - chr6.4:59353471-59353490 None:intergenic 50.0%
GCAATTCTTTCCCTGACAGC+AGG + chr6.4:59353457-59353476 MS.gene49939:CDS 50.0%
GGAACCTTGAAAGGATGGCA+GGG - chr6.4:59356671-59356690 None:intergenic 50.0%
GGCTGTGAATAACTTGGCAC+AGG - chr6.4:59356177-59356196 None:intergenic 50.0%
GTTACCGCACTTCAAGAAGG+AGG + chr6.4:59353285-59353304 MS.gene49939:CDS 50.0%
TATCCAGGACTTCTTCCACC+TGG - chr6.4:59353930-59353949 None:intergenic 50.0%
TCATATGCATCAGTCCCACC+AGG + chr6.4:59356775-59356794 MS.gene49939:CDS 50.0%
TCCTGTGTGTCTTCGTATGG+AGG - chr6.4:59353882-59353901 None:intergenic 50.0%
TCTCATGTTCCAGGAGTCCA+AGG + chr6.4:59355194-59355213 MS.gene49939:CDS 50.0%
TGAAGACTGCACGGTTCCTA+CGG - chr6.4:59356614-59356633 None:intergenic 50.0%
TGACAAACCACCGAGAGGAA+AGG + chr6.4:59353631-59353650 MS.gene49939:CDS 50.0%
TGAGGAACTGTTGGAGCAAC+AGG - chr6.4:59355005-59355024 None:intergenic 50.0%
TGCAATGAACTGCTCTGGCT+TGG - chr6.4:59356568-59356587 None:intergenic 50.0%
TGCCGACATGCTCTTCTTGA+GGG + chr6.4:59354439-59354458 MS.gene49939:intron 50.0%
TGCCTCAAAGCCTGCTAATG+AGG + chr6.4:59355654-59355673 MS.gene49939:CDS 50.0%
TGGACTCCTGGAACATGAGA+AGG - chr6.4:59355194-59355213 None:intergenic 50.0%
TGGAGCAACAGGTTCAGGAT+CGG - chr6.4:59354994-59355013 None:intergenic 50.0%
TGGGTTATCCACCACATGCA+TGG + chr6.4:59356638-59356657 MS.gene49939:CDS 50.0%
TGTGTATCACCTTGGACTCC+TGG - chr6.4:59355206-59355225 None:intergenic 50.0%
TGTTGGGCTTGAGGAACTGT+TGG - chr6.4:59355014-59355033 None:intergenic 50.0%
TTCCTGCTCCAGTTCAAGGT+TGG + chr6.4:59355873-59355892 MS.gene49939:CDS 50.0%
TTTACAGCACCACCCACTGA+CGG - chr6.4:59355451-59355470 None:intergenic 50.0%
! AGCATGTCGGCATTGAAGCA+TGG - chr6.4:59354431-59354450 None:intergenic 50.0%
! CCGAATGGATTCCCTCCTTT+GGG - chr6.4:59357362-59357381 None:intergenic 50.0%
! CCTCAACCTGTTTTGCAGTC+AGG + chr6.4:59355044-59355063 MS.gene49939:CDS 50.0%
! CGAATGGATTCCCTCCTTTG+GGG - chr6.4:59357361-59357380 None:intergenic 50.0%
! CTATCAGGCAGCTGCTGATT+TGG - chr6.4:59357308-59357327 None:intergenic 50.0%
! CTCCCTCAAGAAGAGCATGT+CGG - chr6.4:59354444-59354463 None:intergenic 50.0%
! GAACTGGAGCAGGAAAGTAC+TGG - chr6.4:59355868-59355887 None:intergenic 50.0%
! GACACACAGGAACGTCGTTT+TGG + chr6.4:59353891-59353910 MS.gene49939:CDS 50.0%
! GCATATGATGACGATGGGGT+TGG - chr6.4:59356763-59356782 None:intergenic 50.0%
! GGTACAGAAGGTGCATGCAA+TGG - chr6.4:59355586-59355605 None:intergenic 50.0%
! TTTGGTGACAGGTCTAGTCC+AGG + chr6.4:59353909-59353928 MS.gene49939:CDS 50.0%
!! AATGAACTGCTCTGGCTTGG+AGG - chr6.4:59356565-59356584 None:intergenic 50.0%
!! AGGAACGTCGTTTTGGTGAC+AGG + chr6.4:59353898-59353917 MS.gene49939:CDS 50.0%
!! ATGAACTGCTCTGGCTTGGA+GGG - chr6.4:59356564-59356583 None:intergenic 50.0%
!! ATGCATGTGGTGGATAACCC+AGG - chr6.4:59356639-59356658 None:intergenic 50.0%
!! GATGGATTGCCTAGGTTTGG+AGG - chr6.4:59356727-59356746 None:intergenic 50.0%
!! GCATGTGGCATTGGTGCATT+CGG - chr6.4:59355625-59355644 None:intergenic 50.0%
!! GGGAGTGATGGTGGTACATT+AGG - chr6.4:59356535-59356554 None:intergenic 50.0%
!! GGGTGGTGCTGTAAATAGTC+AGG + chr6.4:59355456-59355475 MS.gene49939:CDS 50.0%
!! TAGCAGGCTTTGAGGCATGA+TGG - chr6.4:59355651-59355670 None:intergenic 50.0%
!! TGCATGTGGTGGATAACCCA+GGG - chr6.4:59356638-59356657 None:intergenic 50.0%
!! TGGGATGGATTGCCTAGGTT+TGG - chr6.4:59356730-59356749 None:intergenic 50.0%
!! TTTCCGCTGTTTGGTTTGGG+GGG - chr6.4:59354176-59354195 None:intergenic 50.0%
AACCGTGCAGTCTTCAACCC+TGG + chr6.4:59356618-59356637 MS.gene49939:intron 55.0%
AACTGCATCCTCTGGCAGCT+TGG + chr6.4:59354902-59354921 MS.gene49939:CDS 55.0%
AATCCACCACTGCCTACCGT+AGG + chr6.4:59356595-59356614 MS.gene49939:intron 55.0%
ACCCAGGGTTGAAGACTGCA+CGG - chr6.4:59356623-59356642 None:intergenic 55.0%
ACCGTGCAGTCTTCAACCCT+GGG + chr6.4:59356619-59356638 MS.gene49939:intron 55.0%
ACCTCTGACAAACCACCGAG+AGG + chr6.4:59353626-59353645 MS.gene49939:CDS 55.0%
ACCTTCTGTACCCACAGGAC+AGG + chr6.4:59355594-59355613 MS.gene49939:CDS 55.0%
ACTGGATACCAAGCTGCCAG+AGG - chr6.4:59354913-59354932 None:intergenic 55.0%
AGTCCAGGTGGAAGAAGTCC+TGG + chr6.4:59353924-59353943 MS.gene49939:CDS 55.0%
ATTAGGCAACGCACCGTGCA+AGG - chr6.4:59356518-59356537 None:intergenic 55.0%
CAATTTCCACCGTCAGTGGG+TGG + chr6.4:59355439-59355458 MS.gene49939:CDS 55.0%
CATGCACCTTCTGTACCCAC+AGG + chr6.4:59355589-59355608 MS.gene49939:CDS 55.0%
CCAAAACTAGGAGCTGCTGC+TGG - chr6.4:59355298-59355317 None:intergenic 55.0%
CCCTCCATACGAAGACACAC+AGG + chr6.4:59353878-59353897 MS.gene49939:CDS 55.0%
CCGTGCAAGGAAGACATGGA+AGG - chr6.4:59356505-59356524 None:intergenic 55.0%
CCTTCTGTACCCACAGGACA+GGG + chr6.4:59355595-59355614 MS.gene49939:CDS 55.0%
CTAACCCCTTCCCCAAAGGA+GGG + chr6.4:59357348-59357367 MS.gene49939:CDS 55.0%
CTAGCAGAAGCAGGGAACGT+TGG - chr6.4:59355415-59355434 None:intergenic 55.0%
CTAGGAGCTGCTGCTGGAAT+AGG - chr6.4:59355292-59355311 None:intergenic 55.0%
CTTACGACCTTTCCTCTCGG+TGG - chr6.4:59353641-59353660 None:intergenic 55.0%
CTTCTGTACCCACAGGACAG+GGG + chr6.4:59355596-59355615 MS.gene49939:CDS 55.0%
GGCAGGGAACCTTGAAAGGA+TGG - chr6.4:59356676-59356695 None:intergenic 55.0%
GGGAACCTTGAAAGGATGGC+AGG - chr6.4:59356672-59356691 None:intergenic 55.0%
GGGGGTCCACTTATCCTAAG+AGG - chr6.4:59354158-59354177 None:intergenic 55.0%
GTCATACGCTGGGCAGCAAA+TGG + chr6.4:59356890-59356909 MS.gene49939:CDS 55.0%
TAGGCAATCCATCCCATGCC+TGG + chr6.4:59356734-59356753 MS.gene49939:CDS 55.0%
TCTAACCCCTTCCCCAAAGG+AGG + chr6.4:59357347-59357366 MS.gene49939:CDS 55.0%
TCTCTAACAGGTCGGACCAC+GGG - chr6.4:59354113-59354132 None:intergenic 55.0%
TGCCAACCTTGAACTGGAGC+AGG - chr6.4:59355878-59355897 None:intergenic 55.0%
TGGTTGCGGATGCTGCAAAC+TGG - chr6.4:59355395-59355414 None:intergenic 55.0%
TTAGAGCTGGGAGTGGTTCC+CGG - chr6.4:59357332-59357351 None:intergenic 55.0%
TTCTCAGCTTTCCCACCCAG+TGG + chr6.4:59355322-59355341 MS.gene49939:CDS 55.0%
TTGACAACTGGAGGACGACC+GGG - chr6.4:59353993-59354012 None:intergenic 55.0%
TTGGGGAAGGGGTTAGAGCT+GGG - chr6.4:59357344-59357363 None:intergenic 55.0%
TTTGGGGAAGGGGTTAGAGC+TGG - chr6.4:59357345-59357364 None:intergenic 55.0%
! AGCTCTAACCCCTTCCCCAA+AGG + chr6.4:59357344-59357363 MS.gene49939:CDS 55.0%
! CCAGCAGCAGCTCCTAGTTT+TGG + chr6.4:59355295-59355314 MS.gene49939:CDS 55.0%
! CCCGAATGGATTCCCTCCTT+TGG - chr6.4:59357363-59357382 None:intergenic 55.0%
! GAAGCAGGGAACGTTGGTTG+CGG - chr6.4:59355409-59355428 None:intergenic 55.0%
! GATGGCACTGAAGTGCCACT+GGG - chr6.4:59355340-59355359 None:intergenic 55.0%
! GATTCCCTCCTTTGGGGAAG+GGG - chr6.4:59357355-59357374 None:intergenic 55.0%
! GGATTCCCTCCTTTGGGGAA+GGG - chr6.4:59357356-59357375 None:intergenic 55.0%
! TCCTCTCGGTGGTTTGTCAG+AGG - chr6.4:59353630-59353649 None:intergenic 55.0%
! TCGGCAGCTTTTCCGCTGTT+TGG - chr6.4:59354185-59354204 None:intergenic 55.0%
! TGGATTCCCTCCTTTGGGGA+AGG - chr6.4:59357357-59357376 None:intergenic 55.0%
!! AGGCATGGGATGGATTGCCT+AGG - chr6.4:59356735-59356754 None:intergenic 55.0%
!! TCTGGCTTGGAGGGTGCATT+GGG - chr6.4:59356555-59356574 None:intergenic 55.0%
ACGGTTCCTACGGTAGGCAG+TGG - chr6.4:59356604-59356623 None:intergenic 60.0%
AGGGGTGGAGTCCATGCATG+TGG - chr6.4:59356652-59356671 None:intergenic 60.0%
ATGGGGTTGGAGTCCAGGCA+TGG - chr6.4:59356750-59356769 None:intergenic 60.0%
ATTCGGATGCCCCTGTCCTG+TGG - chr6.4:59355608-59355627 None:intergenic 60.0%
CCACCCCTGCCATCCTTTCA+AGG + chr6.4:59356664-59356683 MS.gene49939:CDS 60.0%
CCCGAACGAGCTAGAGACCT+GGG + chr6.4:59354074-59354093 MS.gene49939:CDS 60.0%
CCCTGTCCTGTGGGTACAGA+AGG - chr6.4:59355598-59355617 None:intergenic 60.0%
CCTTGAAAGGATGGCAGGGG+TGG - chr6.4:59356667-59356686 None:intergenic 60.0%
CGCACCGTGCAAGGAAGACA+TGG - chr6.4:59356509-59356528 None:intergenic 60.0%
GAAGGGGTTAGAGCTGGGAG+TGG - chr6.4:59357339-59357358 None:intergenic 60.0%
GACTGCACGGTTCCTACGGT+AGG - chr6.4:59356610-59356629 None:intergenic 60.0%
GGACCCCCCAAACCAAACAG+CGG + chr6.4:59354170-59354189 MS.gene49939:CDS 60.0%
GGGTGCATTGGGAGTGATGG+TGG - chr6.4:59356544-59356563 None:intergenic 60.0%
GGGTGCGTAATGCCTGAAGG+TGG - chr6.4:59356706-59356725 None:intergenic 60.0%
GGTGACAGGTCTAGTCCAGG+TGG + chr6.4:59353912-59353931 MS.gene49939:CDS 60.0%
GGTGGAGTCCATGCATGTGG+TGG - chr6.4:59356649-59356668 None:intergenic 60.0%
GTTCCTACGGTAGGCAGTGG+TGG - chr6.4:59356601-59356620 None:intergenic 60.0%
GTTGGAGTCCAGGCATGGGA+TGG - chr6.4:59356745-59356764 None:intergenic 60.0%
TAACAGGTCGGACCACGGGT+GGG - chr6.4:59354109-59354128 None:intergenic 60.0%
TCAGCAGCTGCCTGATAGGC+CGG + chr6.4:59357310-59357329 MS.gene49939:CDS 60.0%
TCCCGAACGAGCTAGAGACC+TGG + chr6.4:59354073-59354092 MS.gene49939:CDS 60.0%
TGACGATGGGGTTGGAGTCC+AGG - chr6.4:59356755-59356774 None:intergenic 60.0%
TGCATTGGAAAGCCCTGCGG+AGG - chr6.4:59355908-59355927 None:intergenic 60.0%
TGGCAAATGGGTCCTCCGCA+GGG + chr6.4:59355893-59355912 MS.gene49939:CDS 60.0%
TGGGGTTGGAGTCCAGGCAT+GGG - chr6.4:59356749-59356768 None:intergenic 60.0%
TTCGGATGCCCCTGTCCTGT+GGG - chr6.4:59355607-59355626 None:intergenic 60.0%
TTGGCAAATGGGTCCTCCGC+AGG + chr6.4:59355892-59355911 MS.gene49939:CDS 60.0%
! CCCAGGTCTCTAGCTCGTTC+GGG - chr6.4:59354077-59354096 None:intergenic 60.0%
! GCACTGAAGTGCCACTGGGT+GGG - chr6.4:59355336-59355355 None:intergenic 60.0%
! GCCCAGGTCTCTAGCTCGTT+CGG - chr6.4:59354078-59354097 None:intergenic 60.0%
! GGAGGGTGCATTGGGAGTGA+TGG - chr6.4:59356547-59356566 None:intergenic 60.0%
! GGAGGGTGCGTAATGCCTGA+AGG - chr6.4:59356709-59356728 None:intergenic 60.0%
! GGATGGCACTGAAGTGCCAC+TGG - chr6.4:59355341-59355360 None:intergenic 60.0%
!! CTCTGGCTTGGAGGGTGCAT+TGG - chr6.4:59356556-59356575 None:intergenic 60.0%
ACAGCACCACCCACTGACGG+TGG - chr6.4:59355448-59355467 None:intergenic 65.0%
CAGCAGCTGCCTGATAGGCC+GGG + chr6.4:59357311-59357330 MS.gene49939:CDS 65.0%
CTAACAGGTCGGACCACGGG+TGG - chr6.4:59354110-59354129 None:intergenic 65.0%
GGAGTGGTTCCCGGCCTATC+AGG - chr6.4:59357323-59357342 None:intergenic 65.0%
! GGCACTGAAGTGCCACTGGG+TGG - chr6.4:59355337-59355356 None:intergenic 65.0%
GGGCTCTTCAAGCCCACCCG+TGG + chr6.4:59354094-59354113 MS.gene49939:CDS 70.0%
! CGGGTGGGCTTGAAGAGCCC+AGG - chr6.4:59354094-59354113 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 59353261 59357385 59353261 ID=MS.gene49939
chr6.4 mRNA 59353261 59357385 59353261 ID=MS.gene49939.t1;Parent=MS.gene49939
chr6.4 exon 59353261 59353314 59353261 ID=MS.gene49939.t1.exon1;Parent=MS.gene49939.t1
chr6.4 CDS 59353261 59353314 59353261 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59353417 59353478 59353417 ID=MS.gene49939.t1.exon2;Parent=MS.gene49939.t1
chr6.4 CDS 59353417 59353478 59353417 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59353559 59353655 59353559 ID=MS.gene49939.t1.exon3;Parent=MS.gene49939.t1
chr6.4 CDS 59353559 59353655 59353559 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59353816 59354223 59353816 ID=MS.gene49939.t1.exon4;Parent=MS.gene49939.t1
chr6.4 CDS 59353816 59354223 59353816 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59354900 59355215 59354900 ID=MS.gene49939.t1.exon5;Parent=MS.gene49939.t1
chr6.4 CDS 59354900 59355215 59354900 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59355287 59355477 59355287 ID=MS.gene49939.t1.exon6;Parent=MS.gene49939.t1
chr6.4 CDS 59355287 59355477 59355287 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59355583 59355747 59355583 ID=MS.gene49939.t1.exon7;Parent=MS.gene49939.t1
chr6.4 CDS 59355583 59355747 59355583 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59355845 59355943 59355845 ID=MS.gene49939.t1.exon8;Parent=MS.gene49939.t1
chr6.4 CDS 59355845 59355943 59355845 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59356174 59356257 59356174 ID=MS.gene49939.t1.exon9;Parent=MS.gene49939.t1
chr6.4 CDS 59356174 59356257 59356174 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59356628 59356796 59356628 ID=MS.gene49939.t1.exon10;Parent=MS.gene49939.t1
chr6.4 CDS 59356628 59356796 59356628 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59356889 59356934 59356889 ID=MS.gene49939.t1.exon11;Parent=MS.gene49939.t1
chr6.4 CDS 59356889 59356934 59356889 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
chr6.4 exon 59357253 59357385 59357253 ID=MS.gene49939.t1.exon12;Parent=MS.gene49939.t1
chr6.4 CDS 59357253 59357385 59357253 ID=cds.MS.gene49939.t1;Parent=MS.gene49939.t1
Gene Sequence

>MS.gene49939

ATGGCTAAATTTACTTCGCAAGAAGTTACCGCACTTCAAGAAGGAGGAAATCAGGTATTGATGCCTTTTGTGCTAAAACTCGTGCCATATTTCTTTTCATTCTGCTTGATATCATATATCTCTTAAGTTTATTTCAACTTTATCTAATACTTGCAGCGTGCAAAAGAGATTTATTTTAAAGAATGGGATGCACAACGCAATTCTTTCCCTGACAGCAGGTAAGTACTTGCTTGTCCGTTTTCATGTATAGTTGCAGAGTGTGTTATTCAATCATTCTGATTGTCATATTTGGTGCCAGTAATGTTAACAGGCTCCGAGAGTTTGTTAAGCATGTTTATGAGGATAGGAGATTCACTGGAGATAGGACCTCTGACAAACCACCGAGAGGAAAGGTCGTAAGATTTTACCCTCCAGGATTCACTTTTTTAAGAAAATATTTGACATTTCAATACAAGTTCAATTTCAAGTTGTCTGCTATTGCTTTTGCTTTAGAATTGATTAAATTTGTCAGCCAATTCTTACTTAGTCTGTTCTCTTGTGTTGTGTGTTGTTCAGGGTGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATACGAAGACACACAGGAACGTCGTTTTGGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGCGATTATAAGAGAAGTCCCGGTCGTCCTCCAGTTGTCAATGATTGGCGTCGTGAAGATCGTAGAGTATCAGATGGAGATTATAAGGTGGAAAGTCAATCTCCCGAACGAGCTAGAGACCTGGGCTCTTCAAGCCCACCCGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTAGGATAAGTGGACCCCCCAAACCAAACAGCGGAAAAGCTGCCGATGCTTCATCACTGACACAGGTGAAACTAATACTGTTGCTGATGTTCCATATTGCCATTTTAAAATGTAATATAAAAACTAATCAAGCATTCTTGTGTTCAGCCTTCATGACACGGTATTAGAACTTGTATAATCAAGTTGTCTAAAGCTCTGTCTTTGCCACTCATAATGGCCTATTCTATTTAATAAAAAGTTGAATTTCAGATGGCGTGTTTGTGCATTTTCCATGCTTCAATGCCGACATGCTCTTCTTGAGGGAGTGTGTTATTATAGATATAATAATAATAATAATGATAGCATTAGCTTTTGGGATATTTTATTTATGAATGGTTCAATCACCCGAGTCTTAATCTTTTCCGTGAGGTTGATTCATTATTTATCTATGATATGTTTATCACTGTTGCTGCGCTAACATTTACCTTGTATTCTTGATCGAAGCTGATGTTTTCAGTTATTCCTTTGGACATTAGAGATGTTTCTTTTCTCTTTAACTTACCGTTTTTAATTTACTGTTTAATTTATTATTTTCTTTAGATTCTTTTATGTTTTCTTTTAAGACGTGGCTTAGCATTTGTCATTTACTTTGTTTGGCATGAACTGTTTTGAGTAACATCTCTCATCTCCCTCTTTAGTGAGGTGGCTGAGTTGATTTTGTACACAAATTATACAACAATAACTGACTGTTCATAATTTCAGAGAACTGCATCCTCTGGCAGCTTGGTATCCAGTAACGAAAGCCAAGTAGAGATTAAACTTGAGACTACTAAGAGCCTTATTGATTTTGATGCCGATCCTGAACCTGTTGCTCCAACAGTTCCTCAAGCCCAACAATCTAGTGTGCCTCAACCTGTTTTGCAGTCAGGAAATCCCAGTGATGACAATTGGGCTTCTTTTGATGTTGCTTCTGAGGCAAAAGCAAATCCAAGCACCTCAAATTTAAATCCGCTTGAATCTGTTTTGTCCCAATTGTCCGTGTCGGAATCTTTACCTTCTCATGTTCCAGGAGTCCAAGGTGATACACATATTGTAATGGCTGTGTGATAACATTAGCAAGAAGTGATGACTCATCTGTTTTATCTGCAGGACCTATTCCAGCAGCAGCTCCTAGTTTTGGCAATTTCTCAGCTTTCCCACCCAGTGGCACTTCAGTGCCATCCGTATCACCTCATAATAATGTAGGACAATGGGCCAGTTTGCAGCATCCGCAACCAACGTTCCCTGCTTCTGCTAGTCAACAATTTCCACCGTCAGTGGGTGGTGCTGTAAATAGTCAGGTTTGGCCAATGAACTTGTCATGTAAAATATTGTTTAGCTAATGGAGTTGTCTGTGTATTTCTGATGCAGTATTAATTTCACTCTGTTCTGGAAATATCTTGCAGCCATTGCATGCACCTTCTGTACCCACAGGACAGGGGCATCCGAATGCACCAATGCCACATGCATACCATCATGCCTCAAAGCCTGCTAATGAGGCTTTTAACAGTGTTGTTTCTCAACCTTCTGCTGTAGAAGTTAAACCAAGTGGAAGAACAGAACTTCCTGAAGTAATCGTGACTACTTATTTCTCTTCACAATCTCTGTATTTTCTGTACACTTGCATATGCCTATTGTTTGGCTAACAATTAGTTGTGATTGGTGCAGGATCTGTTCACTGTAAAACACCAGTACTTTCCTGCTCCAGTTCAAGGTTGGCAAATGGGTCCTCCGCAGGGCTTTCCAATGCAATATAATAATGTGGCGGTACTGTTACAATCCAGAATGATTAGCTTACCAGATTGTCTTAGTATGCGTTTGGATTATCTTATTTTTGTGTTCCAAACACCTTATGATTAATAATCATAGAGGGCCTTTCTTTTTAATTAAAAAGAACGTTTTTCTTCAGAAATAGTCAAACCAAATGCATGTTTTTAATTTGTGGCTAGTACGAAAATGTGTATTTTTCTCATATAAATGTGTGCACTGTGTTACAGCCTGTGCCAAGTTATTCACAGCCGTCAAGGTCAACAAATCCATTCGATGTCAGCAGTAAACAAACCCCAAATCAAGCCCCAAGTGTATGTGACTTTCAATGATTTATGGTATTAGTATGTTCACTGTGTTGTACTATTGCCATAAAGTTAGCATCTTGCATTTAACAGGAATATCGATTAATAAGAAAAATGCATGTTGAAAATTGCTTTGTTTTGTTAATGCTCTCCCATCATTGAAAAGGTTGGAACATTGAAATGTGACATCTGATTTTTTTACATGCTATTCATTGGTTAATTCACGGTATATTGTTTCTCTTGGATGCAGTTTCCTTCCATGTCTTCCTTGCACGGTGCGTTGCCTAATGTACCACCATCACTCCCAATGCACCCTCCAAGCCAGAGCAGTTCATTGCATGCATGGAATCCACCACTGCCTACCGTAGGAACCGTGCAGTCTTCAACCCTGGGTTATCCACCACATGCATGGACTCCACCCCTGCCATCCTTTCAAGGTTCCCTGCCTAATGTACCACCTTCAGGCATTACGCACCCTCCAAACCTAGGCAATCCATCCCATGCCTGGACTCCAACCCCATCGTCATCATATGCATCAGTCCCACCAGGTATGTTTATCCTGTTAATATTCGTCAGTTAATTCATTTATGCCTAGTCGTTTGCTTTTTATCAGTATCCTGAACCATGTTAATACTTTCAGGGTCATACGCTGGGCAGCAAATGGCAACTAATATACCAATGCCAAGGTAAATTTCTCTTCAATCATGATAATATTTATTGCCTGTGCATGCTGTTTAAGCTTATTAAGATTTTATGCTTCTTCGAAACTCGTATTTGGGTCTAATCCTTCATCTAATTTCCCATACATGCTGCATAGCATGAACTTCAATGATACGGTGAACTCTTTATTCATATAAAACACAATTTTAGCATTTTTAGTTGTCCTAGCTTTTGAAATATTGCGATGGGTGCAATTAATTGCAGTTATATTGATAAAATTGATGATAATAGATTGGTGTTCAGTATTACTTGTCACTAGTAAAAGATATTAACTCAATGTGCAGGCAAGGAGTTGGGAATTTCGGAACTGAGGGAAACATGTTCGGCTTGTCAAATCCAAATCAGCAGCTGCCTGATAGGCCGGGAACCACTCCCAGCTCTAACCCCTTCCCCAAAGGAGGGAATCCATTCGGGTAA
Protein sequence

>MS.gene49939.t1

MAKFTSQEVTALQEGGNQRAKEIYFKEWDAQRNSFPDSSNVNRLREFVKHVYEDRRFTGDRTSDKPPRGKVGDKDDSYENRRVEAYQGGSKSPPYEDTQERRFGDRSSPGGRSPGYDQESRQYGDYKRSPGRPPVVNDWRREDRRVSDGDYKVESQSPERARDLGSSSPPVVRPVRDILGENVIPLRISGPPKPNSGKAADASSLTQRTASSGSLVSSNESQVEIKLETTKSLIDFDADPEPVAPTVPQAQQSSVPQPVLQSGNPSDDNWASFDVASEAKANPSTSNLNPLESVLSQLSVSESLPSHVPGVQGPIPAAAPSFGNFSAFPPSGTSVPSVSPHNNVGQWASLQHPQPTFPASASQQFPPSVGGAVNSQPLHAPSVPTGQGHPNAPMPHAYHHASKPANEAFNSVVSQPSAVEVKPSGRTELPEDLFTVKHQYFPAPVQGWQMGPPQGFPMQYNNVAPVPSYSQPSRSTNPFDVSSKQTPNQAPSSSTLGYPPHAWTPPLPSFQGSLPNVPPSGITHPPNLGNPSHAWTPTPSSSYASVPPGSYAGQQMATNIPMPRQGVGNFGTEGNMFGLSNPNQQLPDRPGTTPSSNPFPKGGNPFG