Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50074.t1 | XP_003606885.1 | 97.1 | 1041 | 30 | 0 | 1 | 1041 | 1 | 1041 | 0.00E+00 | 1576.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50074.t1 | Q8VY05 | 46.8 | 930 | 422 | 15 | 116 | 1038 | 122 | 985 | 1.0e-169 | 599.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50074.t1 | G7JG42 | 97.1 | 1041 | 30 | 0 | 1 | 1041 | 1 | 1041 | 0.0e+00 | 1576.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056698 | MS.gene50074 | 0.937486 | 3.21E-98 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50074.t1 | MTR_4g069830 | 98.271 | 1041 | 18 | 0 | 1 | 1041 | 1 | 1041 | 0.0 | 2110 |
MS.gene50074.t1 | MTR_4g069830 | 98.079 | 1041 | 18 | 1 | 1 | 1041 | 1 | 1039 | 0.0 | 2099 |
MS.gene50074.t1 | MTR_3g088480 | 39.789 | 284 | 146 | 8 | 140 | 410 | 172 | 443 | 1.44e-53 | 201 |
MS.gene50074.t1 | MTR_3g088480 | 42.056 | 107 | 58 | 1 | 876 | 978 | 588 | 694 | 1.11e-11 | 69.7 |
MS.gene50074.t1 | MTR_3g099000 | 29.352 | 293 | 165 | 6 | 139 | 407 | 16 | 290 | 8.76e-35 | 141 |
MS.gene50074.t1 | MTR_3g116120 | 29.085 | 306 | 157 | 8 | 133 | 430 | 51 | 304 | 7.07e-32 | 131 |
MS.gene50074.t1 | MTR_5g085170 | 27.957 | 279 | 147 | 8 | 131 | 409 | 23 | 247 | 1.09e-27 | 117 |
MS.gene50074.t1 | MTR_2g026310 | 35.878 | 131 | 74 | 5 | 305 | 429 | 48 | 174 | 2.69e-16 | 84.0 |
MS.gene50074.t1 | MTR_6g053260 | 39.175 | 97 | 53 | 1 | 133 | 229 | 25 | 115 | 4.25e-15 | 80.5 |
MS.gene50074.t1 | MTR_2g026380 | 37.615 | 109 | 58 | 5 | 305 | 407 | 48 | 152 | 1.09e-14 | 78.6 |
MS.gene50074.t1 | MTR_3g081380 | 38.532 | 109 | 57 | 5 | 300 | 402 | 42 | 146 | 4.74e-12 | 66.2 |
MS.gene50074.t1 | MTR_3g081360 | 38.462 | 104 | 54 | 5 | 305 | 402 | 34 | 133 | 1.18e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50074.t1 | AT4G34430 | 45.240 | 1061 | 482 | 23 | 1 | 1038 | 1 | 985 | 0.0 | 727 |
MS.gene50074.t1 | AT4G34430 | 45.240 | 1061 | 482 | 23 | 1 | 1038 | 1 | 985 | 0.0 | 727 |
MS.gene50074.t1 | AT4G34430 | 45.113 | 1064 | 477 | 27 | 1 | 1038 | 1 | 983 | 0.0 | 722 |
MS.gene50074.t1 | AT4G34430 | 45.104 | 1062 | 483 | 24 | 1 | 1038 | 1 | 986 | 0.0 | 721 |
MS.gene50074.t1 | AT1G21700 | 38.112 | 286 | 159 | 6 | 138 | 413 | 175 | 452 | 1.19e-54 | 205 |
MS.gene50074.t1 | AT1G21700 | 37.363 | 91 | 57 | 0 | 878 | 968 | 577 | 667 | 1.71e-11 | 68.9 |
MS.gene50074.t1 | AT2G33610 | 29.348 | 276 | 149 | 7 | 137 | 412 | 47 | 276 | 1.03e-31 | 130 |
MS.gene50074.t1 | AT2G47620 | 29.066 | 289 | 167 | 8 | 133 | 407 | 7 | 271 | 3.60e-24 | 107 |
MS.gene50074.t1 | AT2G47620 | 28.421 | 285 | 174 | 7 | 133 | 407 | 7 | 271 | 3.94e-24 | 108 |
MS.gene50074.t1 | AT4G16420 | 34.959 | 123 | 54 | 5 | 304 | 412 | 44 | 154 | 7.58e-13 | 72.8 |
MS.gene50074.t1 | AT4G16420 | 34.959 | 123 | 54 | 5 | 304 | 412 | 44 | 154 | 7.61e-13 | 72.8 |
MS.gene50074.t1 | AT4G16420 | 34.959 | 123 | 54 | 5 | 304 | 412 | 44 | 154 | 7.86e-13 | 72.8 |
MS.gene50074.t1 | AT3G07740 | 36.697 | 109 | 56 | 5 | 305 | 402 | 51 | 157 | 2.32e-11 | 68.2 |
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGATGCCTTCTTTCTTTAA+TGG | 0.126261 | 4.2:-37049878 | MS.gene50074:CDS |
TGCTTCAATAATAGAAAATT+TGG | 0.186301 | 4.2:-37046656 | MS.gene50074:CDS |
TTATTATCATCTTCTAATTT+AGG | 0.189653 | 4.2:+37046173 | None:intergenic |
ATTGGCTTTCTTCAATGATA+TGG | 0.195048 | 4.2:-37044356 | MS.gene50074:CDS |
GCACCCACACTCGATTTAAT+TGG | 0.208994 | 4.2:+37044880 | None:intergenic |
AGATGATAATAAAGTAAAAT+TGG | 0.214161 | 4.2:-37046162 | MS.gene50074:CDS |
GGAGAGTGAGTGGGAGAGTA+TGG | 0.219490 | 4.2:-37050913 | MS.gene50074:CDS |
GCATAAGTTGGAAACAAAAT+TGG | 0.234663 | 4.2:-37044374 | MS.gene50074:CDS |
TTCAACTCAATTTGTATGTT+TGG | 0.247926 | 4.2:+37049782 | None:intergenic |
TGGTAGCTCCACTGGTAAAT+TGG | 0.277137 | 4.2:+37045143 | None:intergenic |
GATTTATCAGAGCTTGATAT+TGG | 0.277974 | 4.2:-37049758 | MS.gene50074:CDS |
CGTATCTCCATGTATTTATC+AGG | 0.280042 | 4.2:+37049836 | None:intergenic |
AGCTGGATCTGCAGTTTCTT+TGG | 0.281481 | 4.2:+37046388 | None:intergenic |
GATGCAGTTGCAGACATTAA+TGG | 0.285763 | 4.2:+37044082 | None:intergenic |
AATGGAGTTTCTTGACTATT+GGG | 0.288904 | 4.2:-37049711 | MS.gene50074:CDS |
TCATGTTGAATTGCGGTCTT+TGG | 0.290106 | 4.2:+37044164 | None:intergenic |
TAGAACTCTATAAAGAAAAT+TGG | 0.294096 | 4.2:-37046526 | MS.gene50074:CDS |
TAATGGAGTTTCTTGACTAT+TGG | 0.300244 | 4.2:-37049712 | MS.gene50074:CDS |
CTTCAATGATATGGAACATT+TGG | 0.301360 | 4.2:-37044347 | MS.gene50074:CDS |
AGGTCATTGCAGGAGTTATT+AGG | 0.306627 | 4.2:+37049540 | None:intergenic |
CGGCGAGATGGTGTTGGTTC+TGG | 0.310237 | 4.2:+37051209 | None:intergenic |
GGAAGAGGTTGAAGAGGAAT+TGG | 0.321025 | 4.2:+37051142 | None:intergenic |
GCGGCGGCGGAGGAATTGTT+AGG | 0.327762 | 4.2:+37051038 | None:intergenic |
TTCAGATAACAACCTGCTTC+TGG | 0.331919 | 4.2:+37049393 | None:intergenic |
ATGCAGTTGCAGACATTAAT+GGG | 0.343261 | 4.2:+37044083 | None:intergenic |
GAAGATGGGCCTTCAGGTTC+AGG | 0.344428 | 4.2:+37046071 | None:intergenic |
AGTGAGTTTGCAAAATTCAT+AGG | 0.357156 | 4.2:+37044187 | None:intergenic |
ATTTATCAGAGCTTGATATT+GGG | 0.357344 | 4.2:-37049757 | MS.gene50074:CDS |
GCAAATGAAGATGGGCCTTC+AGG | 0.358176 | 4.2:+37046065 | None:intergenic |
AAAATTCATAGGAATTCTAT+TGG | 0.365182 | 4.2:+37044198 | None:intergenic |
TCAGACTTTGGTGTCTCTGC+TGG | 0.367416 | 4.2:+37045117 | None:intergenic |
TACCATTGCAACTCTTGTTC+TGG | 0.370424 | 4.2:-37049443 | MS.gene50074:CDS |
GTTGCAGACATTAATGGGTT+TGG | 0.371866 | 4.2:+37044088 | None:intergenic |
GCAGTTTCCTTCTTATCATC+TGG | 0.373242 | 4.2:+37045722 | None:intergenic |
GGATGCTAGGCAAGAGATAA+TGG | 0.376094 | 4.2:-37049729 | MS.gene50074:CDS |
TATAGAGTTCTAATGCTTCA+AGG | 0.376703 | 4.2:+37046537 | None:intergenic |
TTAATGGAATATCTGAAAAT+CGG | 0.377607 | 4.2:-37049862 | MS.gene50074:CDS |
CAGGGTACTCTGCATAATTC+AGG | 0.379348 | 4.2:-37045324 | MS.gene50074:CDS |
TCGAGTGTGGGTGCTGAAAA+TGG | 0.388201 | 4.2:-37044871 | MS.gene50074:CDS |
TTTGGTGTCTCTGCTGGCTT+TGG | 0.392389 | 4.2:+37045123 | None:intergenic |
TTCATAGGAATTCTATTGGT+TGG | 0.397364 | 4.2:+37044202 | None:intergenic |
AAATTATCATAGCACGTTCA+TGG | 0.398724 | 4.2:+37044278 | None:intergenic |
AACAAACAACAATTTGTCTA+TGG | 0.399824 | 4.2:-37046363 | MS.gene50074:CDS |
ACTAGGTGGAATTTCAGCTT+TGG | 0.405992 | 4.2:+37045290 | None:intergenic |
AGAACCTGGCCATCCTATAA+AGG | 0.406722 | 4.2:-37045235 | MS.gene50074:CDS |
GCTGAAAATGGTGCAATTGC+AGG | 0.406777 | 4.2:-37044859 | MS.gene50074:intron |
GTACCCTGAGCTTGATCATT+GGG | 0.412728 | 4.2:+37045339 | None:intergenic |
CAGGAAAACCTTTCTTCTGT+TGG | 0.415131 | 4.2:-37044034 | MS.gene50074:CDS |
CGCATAACGGTCCCTTAACT+AGG | 0.415201 | 4.2:-37051073 | MS.gene50074:CDS |
AGAGCTTGATATTGGGGATT+CGG | 0.416559 | 4.2:-37049750 | MS.gene50074:CDS |
AGGAAAACCTTTCTTCTGTT+GGG | 0.416937 | 4.2:-37044033 | MS.gene50074:CDS |
TTAATGTCTGCAACTGCATC+AGG | 0.422139 | 4.2:-37044079 | MS.gene50074:CDS |
GATGATAATAAAGTAAAATT+GGG | 0.422701 | 4.2:-37046161 | MS.gene50074:CDS |
CAACTTGCAGTTGCATAAGT+TGG | 0.423894 | 4.2:-37044386 | MS.gene50074:intron |
GCTGGCTTTGGTAGCTCCAC+TGG | 0.424907 | 4.2:+37045135 | None:intergenic |
AACAAGCCCGAGGTCATTGC+AGG | 0.427377 | 4.2:+37049530 | None:intergenic |
TCTTCAGCAATCGCTGGCTC+TGG | 0.427982 | 4.2:+37049506 | None:intergenic |
GACTCAGAGACTGCATTTGT+AGG | 0.430217 | 4.2:+37045039 | None:intergenic |
AGGAATTCTATTGGTTGGTA+TGG | 0.430599 | 4.2:+37044207 | None:intergenic |
TCACTACCATCTTGTAACTT+TGG | 0.434801 | 4.2:+37046218 | None:intergenic |
TTCTGCTTCCCCATCGTCGC+CGG | 0.436481 | 4.2:+37049637 | None:intergenic |
ATTTGACGAGCCCTAGTTAA+GGG | 0.437764 | 4.2:+37051062 | None:intergenic |
AACTACATAAAATCCTTGTC+TGG | 0.440509 | 4.2:-37045800 | MS.gene50074:CDS |
ATTCTATTGGTTGGTATGGA+TGG | 0.442859 | 4.2:+37044211 | None:intergenic |
ATTGGAGGCGTTGAGGGAAC+CGG | 0.443005 | 4.2:+37051160 | None:intergenic |
ATTGGGTGCCTTTGAAATGC+TGG | 0.444828 | 4.2:+37045356 | None:intergenic |
AGGCCAGTCTTCTGAACAAC+AGG | 0.445310 | 4.2:+37049560 | None:intergenic |
GATATTCCATTAAAGAAAGA+AGG | 0.446006 | 4.2:+37049872 | None:intergenic |
ATGGAACCAGCTGAAGCTGC+AGG | 0.449022 | 4.2:-37046602 | MS.gene50074:CDS |
CTAGCACTGAGATTGCTTCA+AGG | 0.449838 | 4.2:-37045769 | MS.gene50074:CDS |
TTATCTTGGGAAGATGTTAG+TGG | 0.450098 | 4.2:+37044943 | None:intergenic |
AGAGGAATTGGAGGCGTTGA+GGG | 0.452695 | 4.2:+37051154 | None:intergenic |
GATTTAATTGGATGTGAAGA+TGG | 0.453049 | 4.2:+37044892 | None:intergenic |
GCCGCGAATTCTTCGACCGC+TGG | 0.455079 | 4.2:-37051020 | MS.gene50074:CDS |
AAATTGTTGTTTGTTGCAGC+TGG | 0.456293 | 4.2:+37046371 | None:intergenic |
GCAGGCGTTGGTTGTGGCGG+CGG | 0.456480 | 4.2:-37050952 | MS.gene50074:CDS |
GCGAGTAATGCGTTTGGAAG+AGG | 0.456686 | 4.2:+37051127 | None:intergenic |
AATACATGGAGATACGGAAT+TGG | 0.459257 | 4.2:-37049829 | MS.gene50074:CDS |
CAGAATCCGTTGAAGGGAAC+GGG | 0.459349 | 4.2:+37049672 | None:intergenic |
TGACGGTTCAAAGACTAAAC+AGG | 0.461587 | 4.2:-37044619 | MS.gene50074:CDS |
TGTTCCTTTATAGGATGGCC+AGG | 0.463175 | 4.2:+37045231 | None:intergenic |
GGCTGGGAGTCAATCTTTGA+TGG | 0.463966 | 4.2:+37044964 | None:intergenic |
TGGCAAGCACCGGCGACGAT+GGG | 0.464399 | 4.2:-37049646 | MS.gene50074:CDS |
TCAACAAAGGCATCCTCAAT+TGG | 0.465053 | 4.2:+37046437 | None:intergenic |
GATTTGACGAGCCCTAGTTA+AGG | 0.465132 | 4.2:+37051061 | None:intergenic |
TAGTGGAAAGTGGACTGATC+AGG | 0.466531 | 4.2:-37046573 | MS.gene50074:CDS |
TGGCACCGGCATGTCTCCAT+TGG | 0.466900 | 4.2:-37046636 | MS.gene50074:CDS |
AAGGAAGCATTTGCAGCTGT+TGG | 0.468533 | 4.2:-37046101 | MS.gene50074:CDS |
GTTGAAGATTGTGCAGGAAA+TGG | 0.469786 | 4.2:-37044657 | MS.gene50074:CDS |
GGCACCCAATGATCAAGCTC+AGG | 0.472306 | 4.2:-37045343 | MS.gene50074:CDS |
GTTTCCTTCTTATCATCTGG+TGG | 0.473026 | 4.2:+37045725 | None:intergenic |
CCCATCTTCATTTGCTGAAG+TGG | 0.473473 | 4.2:-37046057 | MS.gene50074:CDS |
ACAGACGCAGGCGTTGGTTG+TGG | 0.476583 | 4.2:-37050958 | MS.gene50074:CDS |
TCAACGCTGAAGTAAGTTCT+CGG | 0.477306 | 4.2:+37044499 | None:intergenic |
TACTCAAGCATCTCAACTGC+CGG | 0.477760 | 4.2:+37049464 | None:intergenic |
CCTCCGGCACGGCGGCGAGA+TGG | 0.479105 | 4.2:+37051197 | None:intergenic |
CTTGGGAAGATGTTAGTGGC+TGG | 0.479515 | 4.2:+37044947 | None:intergenic |
CCCACTTCAGCAAATGAAGA+TGG | 0.481557 | 4.2:+37046056 | None:intergenic |
TTCAGCGTTGATAGAAAAGC+AGG | 0.481709 | 4.2:-37044487 | MS.gene50074:intron |
ATTCTGTCCCAACAGAAGAA+AGG | 0.482798 | 4.2:+37044026 | None:intergenic |
CCGCCTGTTGTTCAGAAGAC+TGG | 0.486808 | 4.2:-37049563 | MS.gene50074:CDS |
AGTACCCTGAGCTTGATCAT+TGG | 0.487210 | 4.2:+37045338 | None:intergenic |
AGAGGTTGAAGAGGAATTGG+AGG | 0.488389 | 4.2:+37051145 | None:intergenic |
TCTTGAACCTCCTCAGAACT+AGG | 0.489347 | 4.2:+37045273 | None:intergenic |
TTCAGTTCGGCCATCCAGCC+AGG | 0.489559 | 4.2:-37044053 | MS.gene50074:CDS |
CGGCGGCGGAGGAATTGTTA+GGG | 0.494307 | 4.2:+37051039 | None:intergenic |
CCAAGATAATGAGACACAAA+AGG | 0.495790 | 4.2:-37044929 | MS.gene50074:CDS |
TTGAGGCTTGCTCGTATCTG+AGG | 0.496079 | 4.2:+37045071 | None:intergenic |
AGATCCACCAGATGATAAGA+AGG | 0.497489 | 4.2:-37045729 | MS.gene50074:CDS |
GCTTTCCTTGCACAGTTGGT+AGG | 0.497530 | 4.2:-37045851 | MS.gene50074:CDS |
ACAGTTGGTAGGTTCTGATC+TGG | 0.499554 | 4.2:-37045840 | MS.gene50074:CDS |
TAACTTACCAATGCCATGAC+AGG | 0.501317 | 4.2:+37046029 | None:intergenic |
GTGGCAAGCACCGGCGACGA+TGG | 0.501643 | 4.2:-37049647 | MS.gene50074:CDS |
TATGGATGGTGGTACACCTC+TGG | 0.502803 | 4.2:+37044225 | None:intergenic |
GGAGCATGTTTCACCGCGGC+GGG | 0.503047 | 4.2:+37050981 | None:intergenic |
TAACAACCTGCTTCTGGCAG+TGG | 0.504426 | 4.2:+37049399 | None:intergenic |
CAGACATTAATGGGTTTGGA+AGG | 0.504616 | 4.2:+37044092 | None:intergenic |
ACCAACTCTTCAGCAATCGC+TGG | 0.505906 | 4.2:+37049500 | None:intergenic |
GACATTAGTGATAGCATCAA+AGG | 0.506854 | 4.2:-37046299 | MS.gene50074:CDS |
GTAAAATTGGGCGAGGAAGT+AGG | 0.510748 | 4.2:-37046149 | MS.gene50074:CDS |
GGCAGCTTTCCTTGCACAGT+TGG | 0.511189 | 4.2:-37045855 | MS.gene50074:CDS |
GATGGTGTTGGTTCTGGCGC+CGG | 0.514022 | 4.2:+37051215 | None:intergenic |
CTTCCACCCGTTCCCTTCAA+CGG | 0.514244 | 4.2:-37049678 | MS.gene50074:CDS |
CCCTTCAACGGATTCTGCTG+TGG | 0.517903 | 4.2:-37049666 | MS.gene50074:CDS |
ATAACTCCTGCAATGACCTC+GGG | 0.520886 | 4.2:-37049536 | MS.gene50074:CDS |
CGAAGAATTCGCGGCGGCGG+AGG | 0.521082 | 4.2:+37051028 | None:intergenic |
AAGAGGAATTGGAGGCGTTG+AGG | 0.521189 | 4.2:+37051153 | None:intergenic |
AATAATAGAAAATTTGGCAC+CGG | 0.522774 | 4.2:-37046650 | MS.gene50074:CDS |
ATGATAATTTCATCCCGCCT+TGG | 0.523264 | 4.2:-37044265 | MS.gene50074:CDS |
GGAGGAAACAAACGAAAATC+CGG | 0.523751 | 4.2:-37051179 | MS.gene50074:CDS |
ACACCATCTCGCCGCCGTGC+CGG | 0.525220 | 4.2:-37051200 | MS.gene50074:CDS |
GATTCTGCTGTGGCAAGCAC+CGG | 0.526172 | 4.2:-37049656 | MS.gene50074:CDS |
TTTCTCGCGAGTAATGCGTT+TGG | 0.526800 | 4.2:+37051121 | None:intergenic |
TTTATCAGAGCTTGATATTG+GGG | 0.528699 | 4.2:-37049756 | MS.gene50074:CDS |
GCCGGTGTGTCGACCGTGGA+TGG | 0.529897 | 4.2:+37051233 | None:intergenic |
GGTCGAAGAATTCGCGGCGG+CGG | 0.531653 | 4.2:+37051025 | None:intergenic |
CTGATAAATACATGGAGATA+CGG | 0.531711 | 4.2:-37049835 | MS.gene50074:CDS |
ACAACCAACGCCTGCGTCTG+TGG | 0.531806 | 4.2:+37050960 | None:intergenic |
GCAGAATCCGTTGAAGGGAA+CGG | 0.532333 | 4.2:+37049671 | None:intergenic |
CTAACCCCTGCAGCTTCAGC+TGG | 0.532639 | 4.2:+37046596 | None:intergenic |
GTAGTAGCTGCAGTGCTCCC+AGG | 0.534438 | 4.2:+37044115 | None:intergenic |
GGTTATTCTCCTGAACCTGA+AGG | 0.535276 | 4.2:-37046080 | MS.gene50074:CDS |
GTTGGTGAAACAAGAGGGCC+CGG | 0.535404 | 4.2:-37049483 | MS.gene50074:CDS |
TTGGGAAGATGTTAGTGGCT+GGG | 0.537365 | 4.2:+37044948 | None:intergenic |
GGGCCACTTATTTCTAGACC+TGG | 0.538392 | 4.2:-37044133 | MS.gene50074:CDS |
ATTAGCAGCAGCAGCAGTGA+AGG | 0.538514 | 4.2:-37044556 | MS.gene50074:CDS |
GCCACAGCAGAATCCGTTGA+AGG | 0.538619 | 4.2:+37049665 | None:intergenic |
TTCGTTTGTTTCCTCCGGCA+CGG | 0.538698 | 4.2:+37051186 | None:intergenic |
TGAGGCTTGCTCGTATCTGA+GGG | 0.540386 | 4.2:+37045072 | None:intergenic |
GACACCATGTCATCAGACTT+TGG | 0.541625 | 4.2:+37045105 | None:intergenic |
ATATTGGGGATTCGGATGCT+AGG | 0.542507 | 4.2:-37049742 | MS.gene50074:CDS |
GGAAGCTGGTACACCAAGGC+GGG | 0.544865 | 4.2:+37044252 | None:intergenic |
GACGCAGGCGTTGGTTGTGG+CGG | 0.546067 | 4.2:-37050955 | MS.gene50074:CDS |
AATAACTCCTGCAATGACCT+CGG | 0.546306 | 4.2:-37049537 | MS.gene50074:CDS |
TTCAGAAGGCAAGATACATC+AGG | 0.547660 | 4.2:-37045472 | MS.gene50074:CDS |
AAGGGACCGTTATGCGGAGG+AGG | 0.547927 | 4.2:+37051080 | None:intergenic |
ACACCTCTGGATGAGGAAGC+TGG | 0.550305 | 4.2:+37044238 | None:intergenic |
GCGTTTGGAAGAGGTTGAAG+AGG | 0.551396 | 4.2:+37051136 | None:intergenic |
TGCTCCACAGACGCAGGCGT+TGG | 0.551805 | 4.2:-37050964 | MS.gene50074:CDS |
TAAGAAGAAGGAGAGTGAGT+GGG | 0.552069 | 4.2:-37050922 | MS.gene50074:CDS |
ATGGAGTTTCTTGACTATTG+GGG | 0.552996 | 4.2:-37049710 | MS.gene50074:CDS |
CTGCATCAGGAAGTTCAGTT+CGG | 0.554344 | 4.2:-37044066 | MS.gene50074:CDS |
CAATCTGAGAAGTTTCATCA+TGG | 0.554740 | 4.2:+37046276 | None:intergenic |
GGCGGAGCAGCTTAAGAAGA+AGG | 0.554947 | 4.2:-37050934 | MS.gene50074:CDS |
TTGGGTGCCTTTGAAATGCT+GGG | 0.555304 | 4.2:+37045357 | None:intergenic |
TGTGATGATGATGTTGATGC+TGG | 0.555471 | 4.2:-37046413 | MS.gene50074:CDS |
CCATCTTCATTTGCTGAAGT+GGG | 0.555518 | 4.2:-37046056 | MS.gene50074:CDS |
GGAGTCAATCTTTGATGGCA+AGG | 0.556417 | 4.2:+37044969 | None:intergenic |
GCACGGCGGCGAGATGGTGT+TGG | 0.560757 | 4.2:+37051203 | None:intergenic |
CTTGAAGCAATCTCAGTGCT+AGG | 0.561644 | 4.2:+37045770 | None:intergenic |
ATACATCAGGCTTCTACAGA+TGG | 0.562958 | 4.2:-37045459 | MS.gene50074:CDS |
GCGAATTCTTCGACCGCTGG+TGG | 0.563805 | 4.2:-37051017 | MS.gene50074:CDS |
ACGTTACCACTGCCAGAAGC+AGG | 0.564485 | 4.2:-37049405 | MS.gene50074:intron |
TGCGGAGGAGGATGATGAAG+AGG | 0.564645 | 4.2:+37051092 | None:intergenic |
CAATTCAACATGAATCCTCA+AGG | 0.565359 | 4.2:-37044154 | MS.gene50074:CDS |
CAGGGGTTAGTAGTGGAAAG+TGG | 0.569697 | 4.2:-37046583 | MS.gene50074:CDS |
GCCAGCGATTGCTGAAGAGT+TGG | 0.570327 | 4.2:-37049501 | MS.gene50074:CDS |
TTAAGAAGAAGGAGAGTGAG+TGG | 0.570493 | 4.2:-37050923 | MS.gene50074:CDS |
ACCAGCGGTCGAAGAATTCG+CGG | 0.570873 | 4.2:+37051019 | None:intergenic |
CATGTTGTTCCTACTCATTG+TGG | 0.572040 | 4.2:-37050837 | MS.gene50074:intron |
TGATGATCCCAGCATTTCAA+AGG | 0.573292 | 4.2:-37045364 | MS.gene50074:CDS |
GGCCACTTATTTCTAGACCT+GGG | 0.575378 | 4.2:-37044132 | MS.gene50074:CDS |
TGAGGATTCATGTTGAATTG+CGG | 0.578237 | 4.2:+37044157 | None:intergenic |
TCCATGAGTATAAAATCCAA+TGG | 0.579202 | 4.2:+37046620 | None:intergenic |
CCATCTCGCCGCCGTGCCGG+AGG | 0.580539 | 4.2:-37051197 | MS.gene50074:CDS |
ACTCAAGCATCTCAACTGCC+GGG | 0.580618 | 4.2:+37049465 | None:intergenic |
CATCATCCTCCTCCGCATAA+CGG | 0.581397 | 4.2:-37051086 | MS.gene50074:CDS |
GGGTAATCCTGTCATGGCAT+TGG | 0.581809 | 4.2:-37046036 | MS.gene50074:intron |
GGAACTTCAAATGAAGAACC+TGG | 0.582066 | 4.2:-37045249 | MS.gene50074:CDS |
AAAATCCAATGGAGACATGC+CGG | 0.582330 | 4.2:+37046631 | None:intergenic |
TGGAACCAGCTGAAGCTGCA+GGG | 0.584183 | 4.2:-37046601 | MS.gene50074:CDS |
CACCAGAACAAGAGTTGCAA+TGG | 0.585837 | 4.2:+37049441 | None:intergenic |
GGGGCAGTTGAAGATTGTGC+AGG | 0.586468 | 4.2:-37044663 | MS.gene50074:CDS |
TCGGACTCCTGATAAATACA+TGG | 0.588411 | 4.2:-37049843 | MS.gene50074:CDS |
CCACTTCAGCAAATGAAGAT+GGG | 0.589694 | 4.2:+37046057 | None:intergenic |
ACATCCAATTAAATCGAGTG+TGG | 0.591281 | 4.2:-37044884 | MS.gene50074:CDS |
CATCAGGCTTCTACAGATGG+TGG | 0.592471 | 4.2:-37045456 | MS.gene50074:CDS |
GAAGAGTTGGTGAAACAAGA+GGG | 0.592673 | 4.2:-37049488 | MS.gene50074:CDS |
CCACAGCAGAATCCGTTGAA+GGG | 0.594465 | 4.2:+37049666 | None:intergenic |
TAATAAAGTAAAATTGGGCG+AGG | 0.595162 | 4.2:-37046156 | MS.gene50074:CDS |
AGATTGTGCAGGAAATGGTA+TGG | 0.596451 | 4.2:-37044652 | MS.gene50074:CDS |
TAGTTCTGAGGAGGTTCAAG+AGG | 0.596578 | 4.2:-37045271 | MS.gene50074:CDS |
GAGACTCCAAAGTTACAAGA+TGG | 0.599251 | 4.2:-37046224 | MS.gene50074:CDS |
CAGAACCTACCAACTGTGCA+AGG | 0.601627 | 4.2:+37045846 | None:intergenic |
ACTGAAATTGCAGAACATGT+TGG | 0.602329 | 4.2:-37046503 | MS.gene50074:CDS |
TGGTGGTACACCTCTGGATG+AGG | 0.602421 | 4.2:+37044231 | None:intergenic |
TAGTGATGAGAAAACTAGTG+AGG | 0.602881 | 4.2:-37046201 | MS.gene50074:CDS |
TCGTAGGGATTCTAAAAGTG+AGG | 0.603731 | 4.2:-37045592 | MS.gene50074:intron |
AAAACCAATTTCTTCAAAGG+GGG | 0.605112 | 4.2:-37045424 | MS.gene50074:CDS |
GAAGCTGCAGGGGTTAGTAG+TGG | 0.607038 | 4.2:-37046590 | MS.gene50074:CDS |
CTAGAAATAAGTGGCCCTTG+AGG | 0.607651 | 4.2:+37044139 | None:intergenic |
GACACCAAAGTCTGATGACA+TGG | 0.609808 | 4.2:-37045109 | MS.gene50074:CDS |
ACATTTGGTGATGAGAGTAA+AGG | 0.610113 | 4.2:-37044332 | MS.gene50074:CDS |
GGCAAGCACCGGCGACGATG+GGG | 0.610413 | 4.2:-37049645 | MS.gene50074:CDS |
TGGAGCATGTTTCACCGCGG+CGG | 0.612940 | 4.2:+37050980 | None:intergenic |
CCTAACTAACCACAATGAGT+AGG | 0.613784 | 4.2:+37050828 | None:intergenic |
CCAGTCTTCTGAACAACAGG+CGG | 0.613795 | 4.2:+37049563 | None:intergenic |
CTCCCAGGTCTAGAAATAAG+TGG | 0.614411 | 4.2:+37044130 | None:intergenic |
GGAACCAGCTGAAGCTGCAG+GGG | 0.615792 | 4.2:-37046600 | MS.gene50074:CDS |
CAGTCTTCTGAACAACAGGC+GGG | 0.616456 | 4.2:+37049564 | None:intergenic |
AGTGATGAGAAAACTAGTGA+GGG | 0.616658 | 4.2:-37046200 | MS.gene50074:CDS |
ATTGCAAGTGATGCTTCAGA+AGG | 0.617751 | 4.2:-37045486 | MS.gene50074:CDS |
GCATAACGGTCCCTTAACTA+GGG | 0.618791 | 4.2:-37051072 | MS.gene50074:CDS |
GTACCAGCTTCCTCATCCAG+AGG | 0.618834 | 4.2:-37044241 | MS.gene50074:CDS |
TTCTGCTTCTGCTCCCGCCG+CGG | 0.619009 | 4.2:-37050994 | MS.gene50074:CDS |
AGACATTAATGGGTTTGGAA+GGG | 0.622146 | 4.2:+37044093 | None:intergenic |
CAAAGTGAAAGATAATCAAG+AGG | 0.622543 | 4.2:-37046246 | MS.gene50074:CDS |
TCCATCCACGGTCGACACAC+CGG | 0.624239 | 4.2:-37051234 | MS.gene50074:CDS |
TGAAGAGTTGGTGAAACAAG+AGG | 0.627868 | 4.2:-37049489 | MS.gene50074:CDS |
AATCCGTTGAAGGGAACGGG+TGG | 0.629105 | 4.2:+37049675 | None:intergenic |
CGTAGGGATTCTAAAAGTGA+GGG | 0.630014 | 4.2:-37045591 | MS.gene50074:intron |
GGTGTGTCGACCGTGGATGG+AGG | 0.630857 | 4.2:+37051236 | None:intergenic |
GCTAGGAGCATTTCCAGACA+AGG | 0.631533 | 4.2:+37045787 | None:intergenic |
AATTCCACCTAGTTCTGAGG+AGG | 0.632357 | 4.2:-37045280 | MS.gene50074:CDS |
AGCAGAAGCAGAACCACCAG+CGG | 0.633138 | 4.2:+37051004 | None:intergenic |
CATCCAATTAAATCGAGTGT+GGG | 0.633252 | 4.2:-37044883 | MS.gene50074:CDS |
GAAACATGCTCCACAGACGC+AGG | 0.633468 | 4.2:-37050970 | MS.gene50074:CDS |
CTATTGGTTGGTATGGATGG+TGG | 0.636264 | 4.2:+37044214 | None:intergenic |
AATTAAATCCAATTTACCAG+TGG | 0.637307 | 4.2:-37045151 | MS.gene50074:CDS |
ATCATCATCACAGTCAACAA+AGG | 0.639043 | 4.2:+37046424 | None:intergenic |
TGGCGCCGGTGTGTCGACCG+TGG | 0.641203 | 4.2:+37051229 | None:intergenic |
TGAAATTCCACCTAGTTCTG+AGG | 0.652900 | 4.2:-37045283 | MS.gene50074:CDS |
TGAAGTGGGTAATCCTGTCA+TGG | 0.653395 | 4.2:-37046042 | MS.gene50074:CDS |
TGGCTCTGGAAACAAGCCCG+AGG | 0.656759 | 4.2:+37049520 | None:intergenic |
TATGGAAGCTGAAATTGAAG+CGG | 0.657213 | 4.2:-37050895 | MS.gene50074:CDS |
AGTTCTGAGGAGGTTCAAGA+GGG | 0.660854 | 4.2:-37045270 | MS.gene50074:CDS |
AATTCAACATGAATCCTCAA+GGG | 0.661069 | 4.2:-37044153 | MS.gene50074:CDS |
CTAGTTAAGGGACCGTTATG+CGG | 0.665795 | 4.2:+37051074 | None:intergenic |
GCACCCAATGATCAAGCTCA+GGG | 0.666786 | 4.2:-37045342 | MS.gene50074:CDS |
GTTAAGGGACCGTTATGCGG+AGG | 0.673093 | 4.2:+37051077 | None:intergenic |
TGAACCTCCTCAGAACTAGG+TGG | 0.675311 | 4.2:+37045276 | None:intergenic |
GGTACTCTGCATAATTCAGG+TGG | 0.676850 | 4.2:-37045321 | MS.gene50074:CDS |
AGGAAGCTGGTACACCAAGG+CGG | 0.692289 | 4.2:+37044251 | None:intergenic |
AGGAAACTGCTACTTCTGAG+AGG | 0.701706 | 4.2:-37045709 | MS.gene50074:intron |
GTTTGTTTCCTCCGGCACGG+CGG | 0.702356 | 4.2:+37051189 | None:intergenic |
ATGAGGAAGCTGGTACACCA+AGG | 0.705155 | 4.2:+37044248 | None:intergenic |
AGCGGTCGAAGAATTCGCGG+CGG | 0.771809 | 4.2:+37051022 | None:intergenic |
CTGTGGAGCATGTTTCACCG+CGG | 0.778712 | 4.2:+37050977 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 37044024 | 37051273 | 37044024 | ID=MS.gene50074 |
chr4.2 | mRNA | 37044024 | 37051273 | 37044024 | ID=MS.gene50074.t1;Parent=MS.gene50074 |
chr4.2 | exon | 37050838 | 37051273 | 37050838 | ID=MS.gene50074.t1.exon1;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37050838 | 37051273 | 37050838 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37049406 | 37049941 | 37049406 | ID=MS.gene50074.t1.exon2;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37049406 | 37049941 | 37049406 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37046037 | 37046702 | 37046037 | ID=MS.gene50074.t1.exon3;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37046037 | 37046702 | 37046037 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37045710 | 37045876 | 37045710 | ID=MS.gene50074.t1.exon4;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37045710 | 37045876 | 37045710 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37044860 | 37045608 | 37044860 | ID=MS.gene50074.t1.exon5;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37044860 | 37045608 | 37044860 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37044488 | 37044684 | 37044488 | ID=MS.gene50074.t1.exon6;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37044488 | 37044684 | 37044488 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
chr4.2 | exon | 37044024 | 37044398 | 37044024 | ID=MS.gene50074.t1.exon7;Parent=MS.gene50074.t1 |
chr4.2 | CDS | 37044024 | 37044398 | 37044024 | ID=cds.MS.gene50074.t1;Parent=MS.gene50074.t1 |
Gene Sequence |
Protein sequence |