AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51059


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51059.t1 MTR_4g107850 92.375 1036 13 5 1 971 1 1035 0.0 1938
MS.gene51059.t1 MTR_6g028050 43.866 1076 430 23 15 971 3 1023 0.0 844
MS.gene51059.t1 MTR_5g010390 43.102 1051 450 21 18 971 5 1004 0.0 789
MS.gene51059.t1 MTR_6g027540 42.816 1044 465 18 15 971 8 1006 0.0 779
MS.gene51059.t1 MTR_8g031270 39.923 1042 492 20 18 971 5 1000 0.0 726
MS.gene51059.t1 MTR_7g092770 48.575 772 291 15 288 971 19 772 0.0 702
MS.gene51059.t1 MTR_0305s0020 48.442 770 297 13 286 971 18 771 0.0 698
MS.gene51059.t1 MTR_3g027150 47.713 809 296 19 273 971 28 819 0.0 697
MS.gene51059.t1 MTR_7g076900 38.426 1080 465 25 18 971 5 1010 0.0 689
MS.gene51059.t1 MTR_4g023460 47.014 787 305 17 279 971 371 1139 0.0 681
MS.gene51059.t1 MTR_4g023460 42.336 137 76 2 18 154 2 135 4.82e-22 103
MS.gene51059.t1 MTR_4g066150 48.285 758 282 16 301 971 33 767 0.0 667
MS.gene51059.t1 MTR_0291s0010 46.325 762 302 16 301 971 49 794 0.0 651
MS.gene51059.t1 MTR_4g033215 45.335 761 305 18 301 971 302 1041 0.0 627
MS.gene51059.t1 MTR_4g033215 36.496 137 74 4 16 149 1 127 2.16e-15 81.6
MS.gene51059.t1 MTR_4g057675 40.000 805 355 18 270 971 1 780 1.08e-167 510
MS.gene51059.t1 MTR_4g071870 40.077 781 354 20 270 971 1 746 9.43e-161 491
MS.gene51059.t1 MTR_1g015540 37.674 791 369 20 277 968 2 767 2.17e-150 464
MS.gene51059.t1 MTR_5g096980 34.179 749 399 14 302 971 27 760 4.72e-129 408
MS.gene51059.t1 MTR_6g028070 53.333 135 61 1 15 149 3 135 1.70e-39 146
MS.gene51059.t1 MTR_4g023250 42.188 128 45 2 871 971 1 126 3.55e-23 96.3
MS.gene51059.t1 MTR_4g023230 39.167 120 58 1 788 907 49 153 1.70e-22 95.5
MS.gene51059.t1 MTR_4g023390 43.210 81 41 1 874 949 16 96 9.07e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51059.t1 AT1G74720 65.438 1085 252 12 3 971 1 1078 0.0 1401
MS.gene51059.t1 AT3G03680 42.015 1052 475 22 14 971 4 1014 0.0 769
MS.gene51059.t1 AT4G11610 40.530 1056 468 22 18 971 7 1004 0.0 768
MS.gene51059.t1 AT4G11610 40.417 1054 476 21 18 971 7 1008 0.0 766
MS.gene51059.t1 AT5G48060 41.237 1067 475 27 18 971 6 1033 0.0 740
MS.gene51059.t1 AT5G17980 50.602 747 277 14 301 971 316 1046 0.0 736
MS.gene51059.t1 AT5G17980 56.934 137 55 3 15 149 3 137 3.08e-39 158
MS.gene51059.t1 AT1G22610 40.538 1078 467 28 16 971 1 1026 0.0 711
MS.gene51059.t1 AT3G57880 48.244 769 299 13 286 971 18 770 0.0 701
MS.gene51059.t1 AT3G57880 48.244 769 299 13 286 971 18 770 0.0 701
MS.gene51059.t1 AT3G57880 48.244 769 299 13 286 971 18 770 0.0 701
MS.gene51059.t1 AT3G57880 48.244 769 299 13 286 971 18 770 0.0 701
MS.gene51059.t1 AT1G51570 48.516 775 291 16 286 971 18 773 0.0 698
MS.gene51059.t1 AT5G06850 47.854 769 295 15 293 971 39 791 0.0 683
MS.gene51059.t1 AT5G12970 46.310 786 318 15 270 971 1 766 0.0 675
MS.gene51059.t1 AT4G11610 42.737 833 359 15 239 971 57 871 0.0 662
MS.gene51059.t1 AT4G00700 38.046 1054 498 23 18 971 5 1003 0.0 643
MS.gene51059.t1 AT4G00700 38.046 1054 498 23 18 971 5 1003 0.0 643
MS.gene51059.t1 AT1G04150 44.854 787 329 17 276 971 237 1009 0.0 615
MS.gene51059.t1 AT1G04150 42.759 145 78 2 18 162 12 151 2.13e-27 120
MS.gene51059.t1 AT4G20080 44.933 750 317 15 301 971 39 771 0.0 605
MS.gene51059.t1 AT3G61300 43.097 775 332 19 280 971 221 969 0.0 589
MS.gene51059.t1 AT3G61300 35.036 137 78 4 18 149 6 136 4.56e-12 70.9
MS.gene51059.t1 AT3G61720 32.484 785 390 24 301 971 34 792 7.00e-104 342
MS.gene51059.t1 AT5G03435 33.076 777 389 23 280 968 7 740 1.51e-98 327
MS.gene51059.t1 AT5G03435 35.233 579 289 16 280 801 7 556 8.27e-88 292
MS.gene51059.t1 AT5G44760 39.730 370 179 10 301 662 31 364 1.73e-69 239
MS.gene51059.t1 AT5G44760 27.358 212 83 4 714 903 289 451 9.74e-15 78.6

Find 294 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTAGGGTTAAGCTTTA+TGG 0.105107 8.4:+19235960 MS.gene51059:CDS
GTTTATAATGATAAGAAATT+TGG 0.150072 8.4:+19235909 MS.gene51059:CDS
GGAACTTCCTTGACCATCTT+TGG 0.198935 8.4:-19235742 None:intergenic
TCGAAACGGCTTGAAGAAAA+TGG 0.209811 8.4:+19237867 MS.gene51059:CDS
ATTAGAGTGAAGGTACAATT+AGG 0.242637 8.4:+19237133 MS.gene51059:CDS
ATTCTTGAACTTGGAATCTT+AGG 0.246117 8.4:+19237523 MS.gene51059:CDS
CGTTTCTGACCCGGAGAATA+TGG 0.261356 8.4:+19235863 MS.gene51059:CDS
AAAATGGTTGCTGTGGCTTT+AGG 0.266507 8.4:+19238638 MS.gene51059:CDS
GTTCCATTCCGGCGAGTCAT+TGG 0.269436 8.4:-19236699 None:intergenic
CGCCAATCTTCTCACCGTTT+GGG 0.269793 8.4:-19235688 None:intergenic
CTATTCAGTGCCTCCTAAAA+TGG 0.270464 8.4:+19238622 MS.gene51059:CDS
CCGCCAATCTTCTCACCGTT+TGG 0.293001 8.4:-19235689 None:intergenic
GAAGCTATCCGTTACGGTTC+GGG 0.294645 8.4:-19237641 None:intergenic
TAGCTCCAAACCACCTGATT+TGG 0.312359 8.4:+19238436 MS.gene51059:CDS
TACTTTACTTGGTCCTTGTT+TGG 0.312550 8.4:+19238252 MS.gene51059:CDS
CACAAGTTCATATCCATTAC+TGG 0.313298 8.4:+19237837 MS.gene51059:CDS
GCATCTGAACTCCATGCTTC+TGG 0.314338 8.4:-19236983 None:intergenic
TTTATAATGATAAGAAATTT+GGG 0.320068 8.4:+19235910 MS.gene51059:CDS
TGAAGAGGGAAGAGTTTATC+AGG 0.320697 8.4:+19236223 MS.gene51059:CDS
TGATGATGATACTGCATTTC+CGG 0.323781 8.4:-19236383 None:intergenic
TTCACCGCGAGTGGTGGTTT+TGG 0.325194 8.4:+19236289 MS.gene51059:CDS
GATCAAAGCCCGCGAGTTAT+AGG 0.327596 8.4:+19236666 MS.gene51059:CDS
GTCCCACCGCGAAATCTCTA+TGG 0.335869 8.4:+19237485 MS.gene51059:CDS
CGCTCTTCCTCCGGCGGCGG+TGG 0.336230 8.4:-19236143 None:intergenic
CCAGTTGGAATTCTTGAACT+TGG 0.337278 8.4:+19237514 MS.gene51059:CDS
TGAAGCAAAACCGTTGTAAC+TGG 0.339352 8.4:-19238227 None:intergenic
CATTGGTTCAACTAGATCAT+AGG 0.344419 8.4:-19236549 None:intergenic
CAAACCACCTGATTTGGTTC+GGG 0.345778 8.4:+19238442 MS.gene51059:CDS
TGATACTGCATTTCCGGTTC+CGG 0.346606 8.4:-19236377 None:intergenic
TCCGAATCTACCACCGTTAA+CGG 0.347466 8.4:+19237102 MS.gene51059:CDS
CCAAACCACCTGATTTGGTT+CGG 0.347773 8.4:+19238441 MS.gene51059:CDS
CTTGACCATCTTTGGGAAGA+AGG 0.353604 8.4:-19235734 None:intergenic
GACTTCCTAGTTTGTCTGAT+AGG 0.354170 8.4:+19238729 MS.gene51059:CDS
TTAGAGTGAAGGTACAATTA+GGG 0.357179 8.4:+19237134 MS.gene51059:CDS
TTCAAACTAGCCGGAGGCAT+TGG 0.363926 8.4:-19238695 None:intergenic
TCCATACCAGCTGGTATCTT+GGG 0.370566 8.4:-19238347 None:intergenic
CGAAGCTATCCGTTACGGTT+CGG 0.376428 8.4:-19237642 None:intergenic
GAACTTCCTTGACCATCTTT+GGG 0.376568 8.4:-19235741 None:intergenic
TTCTTCCCGGAGATATCTTT+CGG 0.376626 8.4:-19236497 None:intergenic
TCTTACTGTGTGGCCAAGTA+TGG 0.380462 8.4:+19237601 MS.gene51059:CDS
AATTCTTCATCTAATTCATC+TGG 0.381375 8.4:-19238401 None:intergenic
CCAGATTTAATTGTTCCAAC+CGG 0.383775 8.4:+19238278 MS.gene51059:CDS
ATCTTCGTCATCCAATGTTT+AGG 0.384224 8.4:+19238669 MS.gene51059:CDS
CGGCGAGTCATTGGGTTCGT+TGG 0.386763 8.4:-19236690 None:intergenic
TGTGGAGCAAGAGGACTATC+TGG 0.387121 8.4:-19236857 None:intergenic
GCCGAGTAACGCCGCTTCCT+TGG 0.390755 8.4:-19237290 None:intergenic
ATCCATACCAGCTGGTATCT+TGG 0.392091 8.4:-19238348 None:intergenic
CTAATCTCCGGCGCCGTTAA+CGG 0.392366 8.4:-19237115 None:intergenic
GCCAAATGGTTCCCGTTAGA+AGG 0.393717 8.4:+19237370 MS.gene51059:CDS
TTAAAGAACTCAACCCGGTT+TGG 0.395255 8.4:+19235820 MS.gene51059:CDS
TACGTTGGAGATTTCCGTTT+GGG 0.396619 8.4:+19236766 MS.gene51059:CDS
GCGACATACAACTTTCCGTT+TGG 0.398418 8.4:+19236933 MS.gene51059:CDS
TTCCATTCCGGCGAGTCATT+GGG 0.402135 8.4:-19236698 None:intergenic
GTAGATTCGGAGTTAGATTC+AGG 0.403572 8.4:-19237090 None:intergenic
CCGGGTTGAGTTCTTTAAAC+CGG 0.406215 8.4:-19235815 None:intergenic
CCGGTTGGAACAATTAAATC+TGG 0.406243 8.4:-19238278 None:intergenic
TTTATCAATCACCGAAGCTT+TGG 0.407372 8.4:+19237035 MS.gene51059:CDS
AGAGCTACAAAATTGTTCAT+TGG 0.408099 8.4:+19238572 MS.gene51059:CDS
TCACCATTACCGTTACCATT+AGG 0.411334 8.4:-19236467 None:intergenic
CCGAACCAAATCAGGTGGTT+TGG 0.414261 8.4:-19238441 None:intergenic
GAATTGTGGCAGTGTTAGCT+TGG 0.418307 8.4:+19238156 MS.gene51059:CDS
GGCGAGTCATTGGGTTCGTT+GGG 0.418426 8.4:-19236689 None:intergenic
TTTGCTTCATATACTTTACT+TGG 0.418669 8.4:+19238241 MS.gene51059:CDS
CACCTACGCCTCTGTTTAGA+AGG 0.419906 8.4:+19237415 MS.gene51059:CDS
GGCTCGCTCAGAGCCTCCGA+TGG 0.423198 8.4:+19238055 MS.gene51059:CDS
CCGTAGGTGTATTTGACAAC+TGG 0.423400 8.4:+19237722 MS.gene51059:CDS
AGGTTCTAACCTTCACGAAC+GGG 0.423882 8.4:-19236628 None:intergenic
AAATCCAAGGGTCCAGGAAA+AGG 0.425305 8.4:+19237568 MS.gene51059:CDS
ACCTTCTAACGGGAACCATT+TGG 0.426014 8.4:-19237371 None:intergenic
TTGTAGAGGTGAAGAAGCTT+TGG 0.428883 8.4:+19235995 MS.gene51059:CDS
TAACGAACCCGAACCAAATC+AGG 0.429394 8.4:-19238449 None:intergenic
TCGAAGTCCGCCACCACGTA+AGG 0.430336 8.4:-19235768 None:intergenic
CGCGGTGAAGGAGGACCGTC+AGG 0.430588 8.4:-19236275 None:intergenic
TCAAGCAACTCGTTCCAAAC+CGG 0.432570 8.4:-19235834 None:intergenic
GCCGTTAACGGTGGTAGATT+CGG 0.433227 8.4:-19237103 None:intergenic
GTTTGAAGAGCTTGAAGTTG+AGG 0.433946 8.4:+19235887 MS.gene51059:CDS
GCGGGAGATGTACGCTCAAC+CGG 0.439542 8.4:+19236358 MS.gene51059:CDS
CCACTGAGCTACCATCTTAG+TGG 0.440567 8.4:-19238030 None:intergenic
GTTAGAATCGTGAAGGTTCG+CGG 0.443339 8.4:+19236584 MS.gene51059:CDS
CTACGTTGGAGATTTCCGTT+TGG 0.447066 8.4:+19236765 MS.gene51059:CDS
TGCCACAATTCTAAACCAAT+TGG 0.447859 8.4:-19238144 None:intergenic
TTCACCGTTAGGTTTCTTCC+CGG 0.449009 8.4:-19236510 None:intergenic
AGTTGGATTAGAGGTGAAAT+CGG 0.452238 8.4:+19236050 MS.gene51059:CDS
GCAGTGTTAGCTTGGGCTGT+TGG 0.454236 8.4:+19238164 MS.gene51059:CDS
GCTCGCTCAGAGCCTCCGAT+GGG 0.455368 8.4:+19238056 MS.gene51059:CDS
TGGGGCGGTCCTTGTTGAAA+CGG 0.456111 8.4:-19235669 None:intergenic
GATGTACGCTCAACCGGAAC+CGG 0.457522 8.4:+19236364 MS.gene51059:CDS
CAGTCACAGGCATCCGATGA+TGG 0.462725 8.4:+19236199 MS.gene51059:CDS
AAATCAGGTGGTTTGGAGCT+AGG 0.462960 8.4:-19238434 None:intergenic
TCAAACTAGCCGGAGGCATT+GGG 0.463156 8.4:-19238694 None:intergenic
TCAACAAGATCCACCGTTGC+GGG 0.465205 8.4:+19236340 MS.gene51059:CDS
ACCCAAGATACCAGCTGGTA+TGG 0.466006 8.4:+19238346 MS.gene51059:CDS
GTCCGCCACCACGTAAGGGC+TGG 0.472594 8.4:-19235763 None:intergenic
AGCCAATTGGTTTAGAATTG+TGG 0.473301 8.4:+19238142 MS.gene51059:CDS
GCAAGAACAACCACCGCCGC+CGG 0.473843 8.4:+19236133 MS.gene51059:CDS
CAAAACGCCGGTAGAGTCTC+CGG 0.474134 8.4:+19236911 MS.gene51059:CDS
ATCCTCTCAGATTCACCGTT+AGG 0.477236 8.4:-19236521 None:intergenic
TGAGGAAAAGTAAAGCCAAT+TGG 0.477748 8.4:+19238129 MS.gene51059:CDS
TGCCGCTCTTCCTCCGGCGG+CGG 0.477763 8.4:-19236146 None:intergenic
AAGATTATGAAGAGACCTAA+TGG 0.478269 8.4:+19236452 MS.gene51059:CDS
ACGAACGGGCTTTCAGTTGG+AGG 0.481142 8.4:-19236614 None:intergenic
CGGGTTGAGTTCTTTAAACC+GGG 0.481919 8.4:-19235814 None:intergenic
CTGGTATCTTGGGTCTAAAA+CGG 0.482340 8.4:-19238337 None:intergenic
TTTGGAAGAATCACCTTCTC+CGG 0.482881 8.4:+19236307 MS.gene51059:CDS
AATTGTGGCAGTGTTAGCTT+GGG 0.483059 8.4:+19238157 MS.gene51059:CDS
CGCAACCTTCTTCCCAAAGA+TGG 0.483543 8.4:+19235729 MS.gene51059:CDS
ACCAAGGAAGCGGCGTTACT+CGG 0.483659 8.4:+19237289 MS.gene51059:CDS
AAGAAATTTGGGAATGGTAG+TGG 0.487221 8.4:+19235921 MS.gene51059:CDS
CTATCTGGAGAATCACGAAT+AGG 0.489424 8.4:-19236842 None:intergenic
CTGGCGTATGTTTGCTGATG+TGG 0.491272 8.4:+19237741 MS.gene51059:CDS
AGTAGGACCCACCTTCTAAC+GGG 0.492134 8.4:-19237381 None:intergenic
ACTCACATGCTTGGAGTATG+AGG 0.492503 8.4:+19238111 MS.gene51059:CDS
CCACCGTGCCGCTCTTCCTC+CGG 0.492946 8.4:-19236152 None:intergenic
CCAAGTTCAAGAATTCCAAC+TGG 0.494458 8.4:-19237514 None:intergenic
GCCCCAAACGGTGAGAAGAT+TGG 0.495143 8.4:+19235686 MS.gene51059:CDS
TCTTCAAACTCCATATTCTC+CGG 0.496145 8.4:-19235873 None:intergenic
TACAGCAAAACCGATGCAAC+CGG 0.497708 8.4:+19236740 MS.gene51059:CDS
CGAAACGGCTTGAAGAAAAT+GGG 0.497923 8.4:+19237868 MS.gene51059:CDS
TCACCTACAGAGCAATTTCT+CGG 0.498901 8.4:+19236791 MS.gene51059:CDS
CCTGGACCCTTGGATTTCAT+CGG 0.499593 8.4:-19237562 None:intergenic
GGCATTGGGTTCCTAAACAT+TGG 0.499655 8.4:-19238680 None:intergenic
CACCGCCGCCGGAGGAAGAG+CGG 0.500632 8.4:+19236144 MS.gene51059:CDS
AGACCTAATGGTAACGGTAA+TGG 0.501527 8.4:+19236464 MS.gene51059:CDS
ACCGCCACGTGCCAGCCAAA+TGG 0.504191 8.4:+19237356 MS.gene51059:CDS
TGAGTTCATCGTTTCTGACC+CGG 0.506939 8.4:+19235854 MS.gene51059:CDS
TTCACGAACGGGCTTTCAGT+TGG 0.506939 8.4:-19236617 None:intergenic
TTACTGGTTCTGACTCGAAA+CGG 0.508290 8.4:+19237853 MS.gene51059:CDS
GGGCTGTTGGATTAGCTAAG+TGG 0.510508 8.4:+19238177 MS.gene51059:CDS
CTTCGGTGATTGATAAACCT+TGG 0.511460 8.4:-19237029 None:intergenic
GAGTTCTTTAAACCGGGTGG+TGG 0.513084 8.4:-19235808 None:intergenic
AATCCAAGGGTCCAGGAAAA+GGG 0.514447 8.4:+19237569 MS.gene51059:CDS
AACCCAATGACTCGCCGGAA+TGG 0.515956 8.4:+19236696 MS.gene51059:CDS
GAGTAACGCCGCTTCCTTGG+TGG 0.517547 8.4:-19237287 None:intergenic
AGTTTATCAGGTTGAACAGA+TGG 0.517807 8.4:+19236235 MS.gene51059:CDS
CAGATTTAATTGTTCCAACC+GGG 0.519192 8.4:+19238279 MS.gene51059:CDS
CTCTGTAGGTGAATCCCAAA+CGG 0.519575 8.4:-19236780 None:intergenic
GTTTAGGAACCCAATGCCTC+CGG 0.524667 8.4:+19238685 MS.gene51059:CDS
TGCTTCTGGAAAAGCGTCGT+CGG 0.525056 8.4:-19236969 None:intergenic
TTCCAGCCCTTACGTGGTGG+CGG 0.525448 8.4:+19235761 MS.gene51059:CDS
TCCTCCTTCACCGCGAGTGG+TGG 0.527371 8.4:+19236283 MS.gene51059:CDS
CAACGTAGCACCGGTTGCAT+CGG 0.530953 8.4:-19236750 None:intergenic
TGGTTCGGGTTCGTTATGAC+AGG 0.531469 8.4:+19238456 MS.gene51059:CDS
TTAGAATCGTGAAGGTTCGC+GGG 0.531801 8.4:+19236585 MS.gene51059:CDS
TGATCTGACGTAGTGACTTG+AGG 0.535682 8.4:-19236648 None:intergenic
CAAGCAACTCGTTCCAAACC+GGG 0.536644 8.4:-19235833 None:intergenic
ACTCTCAGATACCAAAGCTT+CGG 0.537168 8.4:-19237046 None:intergenic
TGGATGCTGACTCACATGCT+TGG 0.537691 8.4:+19238102 MS.gene51059:CDS
ATTGGTTCAACTAGATCATA+GGG 0.538697 8.4:-19236548 None:intergenic
TCAACAAGGACCGCCCCAAA+CGG 0.540444 8.4:+19235674 MS.gene51059:CDS
GAAGGAGGACCGTCAGGAAG+TGG 0.540621 8.4:-19236269 None:intergenic
CCGATGAAATCCAAGGGTCC+AGG 0.541851 8.4:+19237562 MS.gene51059:CDS
CCGCCGAGAAATTGCTCTGT+AGG 0.542679 8.4:-19236794 None:intergenic
ACCACAGCATGTCGTTTCAC+TGG 0.543586 8.4:+19237194 MS.gene51059:CDS
GCCTCCTAAAATGGTTGCTG+TGG 0.544475 8.4:+19238631 MS.gene51059:CDS
CTTGGAATCTTAGGCGCTCG+TGG 0.546490 8.4:+19237532 MS.gene51059:CDS
ACGGTGGCGCAGAGCAAGAG+AGG 0.547631 8.4:+19236168 MS.gene51059:CDS
TCTTGTTGAACACGAACTAC+CGG 0.547815 8.4:-19236326 None:intergenic
AGGTTTCCATAGAGATTTCG+CGG 0.548210 8.4:-19237491 None:intergenic
AACGGTGAGAAGATTGGCGG+TGG 0.548470 8.4:+19235692 MS.gene51059:CDS
CTTCCCTCTTCACCCATCAT+CGG 0.549244 8.4:-19236212 None:intergenic
TTCGTTGGGCCTATAACTCG+CGG 0.549831 8.4:-19236675 None:intergenic
TACGCGCCGAAAGATATCTC+CGG 0.550302 8.4:+19236491 MS.gene51059:CDS
GCCCAACAGGAGGCTTTACG+CGG 0.551222 8.4:+19238002 MS.gene51059:intron
CTTCTAAACAGAGGCGTAGG+TGG 0.551291 8.4:-19237414 None:intergenic
TCTCTATGGAAACCTCCAGT+TGG 0.551296 8.4:+19237499 MS.gene51059:CDS
CGAGGTTGTTCGATACATGT+TGG 0.551957 8.4:+19238082 MS.gene51059:CDS
CTTCAAACTCCATATTCTCC+GGG 0.552338 8.4:-19235872 None:intergenic
TTTCGAGTCAGAACCAGTAA+TGG 0.553602 8.4:-19237850 None:intergenic
AGAACAACCACCGCCGCCGG+AGG 0.554031 8.4:+19236136 MS.gene51059:CDS
AACGGAAAGTTGTATGTCGC+CGG 0.556257 8.4:-19236930 None:intergenic
CGGTCCTCCTTCACCGCGAG+TGG 0.556306 8.4:+19236280 MS.gene51059:CDS
GCCAATCTTCTCACCGTTTG+GGG 0.556670 8.4:-19235687 None:intergenic
GGTTAGATGATATAAGAAGA+TGG 0.557390 8.4:+19238198 MS.gene51059:CDS
AATGATAAGAAATTTGGGAA+TGG 0.559099 8.4:+19235915 MS.gene51059:CDS
CATCCGATGATGGGTGAAGA+GGG 0.559487 8.4:+19236209 MS.gene51059:CDS
GAGGTTCTAACCTTCACGAA+CGG 0.559610 8.4:-19236629 None:intergenic
CGATGCAACCGGTGCTACGT+TGG 0.560184 8.4:+19236751 MS.gene51059:CDS
AAAACCACCACTCGCGGTGA+AGG 0.560550 8.4:-19236287 None:intergenic
ACGCGCCGAAAGATATCTCC+GGG 0.561337 8.4:+19236492 MS.gene51059:CDS
AGATCGCACCACCAAGGAAG+CGG 0.562726 8.4:+19237279 MS.gene51059:CDS
GAAGATCTTCTCTTCGTCGC+CGG 0.563391 8.4:+19237220 MS.gene51059:CDS
CGAACAACCTCGTGCCCCAT+CGG 0.563726 8.4:-19238071 None:intergenic
GCATCCGATGATGGGTGAAG+AGG 0.563834 8.4:+19236208 MS.gene51059:CDS
AGAGGAACAATCACAGTCAC+AGG 0.565907 8.4:+19236186 MS.gene51059:CDS
GGTCAGAACCCGAACCGTAA+CGG 0.565952 8.4:+19237633 MS.gene51059:CDS
GAGCGAGTGTGTGCCACGTA+TGG 0.566668 8.4:-19237007 None:intergenic
TTCCATAGAGATTTCGCGGT+GGG 0.569256 8.4:-19237487 None:intergenic
TGTACTGTTCGTTCCACCGT+GGG 0.569348 8.4:-19237666 None:intergenic
TCGTTGGGCCTATAACTCGC+GGG 0.569538 8.4:-19236674 None:intergenic
AGTCACAGGCATCCGATGAT+GGG 0.570113 8.4:+19236200 MS.gene51059:CDS
CCTTGCACTGTCTTAACCGT+AGG 0.571276 8.4:+19237706 MS.gene51059:CDS
TTTAGACCCAAGATACCAGC+TGG 0.572276 8.4:+19238341 MS.gene51059:CDS
CAGTAGGACCCACCTTCTAA+CGG 0.572682 8.4:-19237382 None:intergenic
TCTACCACCGTTAACGGCGC+CGG 0.574432 8.4:+19237108 MS.gene51059:CDS
TCTAACGGGAACCATTTGGC+TGG 0.574894 8.4:-19237367 None:intergenic
AAATGGTTCCCGTTAGAAGG+TGG 0.575886 8.4:+19237373 MS.gene51059:CDS
ATACAACTTTCCGTTTGGAT+CGG 0.577068 8.4:+19236938 MS.gene51059:CDS
AACTGAAAGCCCGTTCGTGA+AGG 0.577259 8.4:+19236619 MS.gene51059:CDS
TTAGAAGGTGGGTCCTACTG+TGG 0.577831 8.4:+19237385 MS.gene51059:CDS
TAAGATGGTAGCTCAGTGGC+TGG 0.577993 8.4:+19238034 MS.gene51059:CDS
TGACTCGCCGGAATGGAACC+AGG 0.578461 8.4:+19236703 MS.gene51059:CDS
CTAACAAACAGATACTGCAT+TGG 0.578943 8.4:-19236566 None:intergenic
TGTACCTTCACTCTAATCTC+CGG 0.580661 8.4:-19237127 None:intergenic
ACCACCACTCGCGGTGAAGG+AGG 0.581513 8.4:-19236284 None:intergenic
CCCAACAGGAGGCTTTACGC+GGG 0.582876 8.4:+19238003 MS.gene51059:intron
TACGTGGTGGCGGACTTCGA+CGG 0.582930 8.4:+19235771 MS.gene51059:CDS
CAACGAACCCAATGACTCGC+CGG 0.583064 8.4:+19236691 MS.gene51059:CDS
CGGTACCATTGTGGAGCAAG+AGG 0.584297 8.4:-19236866 None:intergenic
AATGGGTGAAATCGAGTTAG+CGG 0.585887 8.4:+19237885 MS.gene51059:CDS
CGCTGTTCGATTGACGTCAG+AGG 0.586187 8.4:-19237325 None:intergenic
CGAAGTCCGCCACCACGTAA+GGG 0.586229 8.4:-19235767 None:intergenic
TATGTCGCCGGAGACTCTAC+CGG 0.586518 8.4:-19236918 None:intergenic
AATCTTGTATCCATACCAGC+TGG 0.589612 8.4:-19238356 None:intergenic
TCTGTTTGTTAGAATCGTGA+AGG 0.590343 8.4:+19236577 MS.gene51059:CDS
CGTGGCACACACTCGCTCCA+AGG 0.590638 8.4:+19237012 MS.gene51059:CDS
TGAACACGAACTACCGGAGA+AGG 0.591102 8.4:-19236320 None:intergenic
CAATCACAGAGAACAAGAAG+AGG 0.591111 8.4:+19237160 MS.gene51059:CDS
AATCTTCTCACCGTTTGGGG+CGG 0.592507 8.4:-19235684 None:intergenic
AGAGCCTCCGATGGGGCACG+AGG 0.594720 8.4:+19238064 MS.gene51059:CDS
CCGGTTTAAAGAACTCAACC+CGG 0.594943 8.4:+19235815 MS.gene51059:CDS
GGAAATCTCCAACGTAGCAC+CGG 0.596844 8.4:-19236759 None:intergenic
GGAATCTTCTAGTGGCTCAC+CGG 0.597195 8.4:-19237239 None:intergenic
CTCGCTCAGAGCCTCCGATG+GGG 0.597618 8.4:+19238057 MS.gene51059:CDS
TTATCACGTGCTTGATGAAG+CGG 0.601621 8.4:+19237441 MS.gene51059:CDS
TTCAACAAGATCCACCGTTG+CGG 0.602303 8.4:+19236339 MS.gene51059:CDS
ATCAACCTATCAGACAAACT+AGG 0.603071 8.4:-19238734 None:intergenic
ATCTTCTACGAGAAGGACCA+TGG 0.603592 8.4:-19237260 None:intergenic
TAGAAGGTGGGTCCTACTGT+GGG 0.603855 8.4:+19237386 MS.gene51059:CDS
CCACAATGGTACCGTCTCGA+AGG 0.605104 8.4:+19236875 MS.gene51059:CDS
ATGAAGAGACCTAATGGTAA+CGG 0.606071 8.4:+19236458 MS.gene51059:CDS
ACGCGGGGCAGCCACTAAGA+TGG 0.606291 8.4:+19238019 MS.gene51059:CDS
ACAACCTCGTGCCCCATCGG+AGG 0.608544 8.4:-19238068 None:intergenic
AATGGTTCCCGTTAGAAGGT+GGG 0.608687 8.4:+19237374 MS.gene51059:CDS
AGTTCAAGAATTCCAACTGG+AGG 0.611937 8.4:-19237511 None:intergenic
CCAAACGGTGAGAAGATTGG+CGG 0.612320 8.4:+19235689 MS.gene51059:CDS
TGGGTCGAAGCTATCCGTTA+CGG 0.615070 8.4:-19237647 None:intergenic
ACCATTTGGCTGGCACGTGG+CGG 0.615125 8.4:-19237357 None:intergenic
CCTTCGAGACGGTACCATTG+TGG 0.615235 8.4:-19236875 None:intergenic
CTACGCCTCTGTTTAGAAGG+TGG 0.615741 8.4:+19237418 MS.gene51059:CDS
GGCCACACAGTAAGAATCAG+TGG 0.616175 8.4:-19237593 None:intergenic
TGAGCCACTAGAAGATTCCA+TGG 0.617345 8.4:+19237243 MS.gene51059:CDS
AGAGAAAACGAACCACCACC+CGG 0.617915 8.4:+19235796 MS.gene51059:CDS
CTGCTGCGCCACCTTCGAGA+CGG 0.618995 8.4:-19236886 None:intergenic
CCGCCGGAGGAAGAGCGGCA+CGG 0.619495 8.4:+19236149 MS.gene51059:CDS
CAATGGTACCGTCTCGAAGG+TGG 0.621124 8.4:+19236878 MS.gene51059:CDS
TGGTGCGATCTTCTACGAGA+AGG 0.622059 8.4:-19237267 None:intergenic
GAACGAACAGTACACATGGC+AGG 0.622431 8.4:+19237675 MS.gene51059:CDS
CTTCTTCCCAAAGATGGTCA+AGG 0.623665 8.4:+19235735 MS.gene51059:CDS
AGGAAGTTCCAGCCCTTACG+TGG 0.623834 8.4:+19235755 MS.gene51059:CDS
TAACGGATAGCTTCGACCCA+CGG 0.625339 8.4:+19237650 MS.gene51059:CDS
CATTGTGTGCCACTTCCTGA+CGG 0.625959 8.4:+19236260 MS.gene51059:CDS
TCTTCTTCCGATGAAATCCA+AGG 0.627021 8.4:+19237555 MS.gene51059:CDS
CTTCTTCCGATGAAATCCAA+GGG 0.628802 8.4:+19237556 MS.gene51059:CDS
GGAACCATTTGGCTGGCACG+TGG 0.629535 8.4:-19237360 None:intergenic
TGAGCGTACATCTCCCGCAA+CGG 0.631429 8.4:-19236353 None:intergenic
GGCGCCGGAGATTAGAGTGA+AGG 0.631671 8.4:+19237123 MS.gene51059:CDS
GTATCTGAGAGTAACAGTCA+TGG 0.631794 8.4:+19237057 MS.gene51059:CDS
TAGGTGGACTCTCCCACAGT+AGG 0.634184 8.4:-19237398 None:intergenic
GTTGAGTTCTTTAAACCGGG+TGG 0.635261 8.4:-19235811 None:intergenic
CCAGTTGTCAAATACACCTA+CGG 0.635674 8.4:-19237722 None:intergenic
CCTACGGTTAAGACAGTGCA+AGG 0.636191 8.4:-19237706 None:intergenic
ATCTCCGGCGCCGTTAACGG+TGG 0.640916 8.4:-19237112 None:intergenic
ATCATCATCATCCTGACGTG+AGG 0.641393 8.4:+19236399 MS.gene51059:CDS
TCTTCCAAAACCACCACTCG+CGG 0.641790 8.4:-19236293 None:intergenic
GCCAGTGAAACGACATGCTG+TGG 0.643248 8.4:-19237195 None:intergenic
AACCTAACGGTGAATCTGAG+AGG 0.643417 8.4:+19236519 MS.gene51059:CDS
GCGTACATCTCCCGCAACGG+TGG 0.645515 8.4:-19236350 None:intergenic
CCAACAGGAGGCTTTACGCG+GGG 0.647836 8.4:+19238004 MS.gene51059:intron
GCAACGACGCCGTTTCAACA+AGG 0.650190 8.4:+19235660 MS.gene51059:CDS
CCGTGCCGCTCTTCCTCCGG+CGG 0.652794 8.4:-19236149 None:intergenic
GTGTACTGTTCGTTCCACCG+TGG 0.657085 8.4:-19237667 None:intergenic
AAGTTCCAGCCCTTACGTGG+TGG 0.659152 8.4:+19235758 MS.gene51059:CDS
AGTGAAACGACATGCTGTGG+TGG 0.659402 8.4:-19237192 None:intergenic
TCTCGATGAGACTATGAACA+TGG 0.660012 8.4:+19235638 None:intergenic
GAGTTCAGATGCACCATACG+TGG 0.662296 8.4:+19236994 MS.gene51059:CDS
ATAGTCCTCTTGCTCCACAA+TGG 0.663046 8.4:+19236861 MS.gene51059:CDS
AGGACCATGGAATCTTCTAG+TGG 0.663292 8.4:-19237247 None:intergenic
CCGGAGGAAGAGCGGCACGG+TGG 0.663473 8.4:+19236152 MS.gene51059:CDS
ATCTCCGGGAAGAAACCTAA+CGG 0.664237 8.4:+19236506 MS.gene51059:CDS
GTCCACTGATTCTTACTGTG+TGG 0.665645 8.4:+19237591 MS.gene51059:CDS
CACCTTCTAAACAGAGGCGT+AGG 0.667135 8.4:-19237417 None:intergenic
CGTAGAAGATCGCACCACCA+AGG 0.672290 8.4:+19237273 MS.gene51059:CDS
CGGATAGCTTCGACCCACGG+TGG 0.684725 8.4:+19237653 MS.gene51059:CDS
TGAGGAAAATGCAAACAATG+AGG 0.684870 8.4:+19236417 MS.gene51059:CDS
GGCGCAGCAGAACAAAACGC+CGG 0.688834 8.4:+19236899 MS.gene51059:CDS
GGATTGAGTTCCGATCCAAA+CGG 0.689297 8.4:-19236948 None:intergenic
CGAACCCGAACCAAATCAGG+TGG 0.692684 8.4:-19238446 None:intergenic
CCACTAAGATGGTAGCTCAG+TGG 0.696907 8.4:+19238030 MS.gene51059:CDS
TTAAATCTGGATACCAAACA+AGG 0.703911 8.4:-19238265 None:intergenic
GGTGGAACGAACAGTACACA+TGG 0.706630 8.4:+19237671 MS.gene51059:CDS
CCTACAGAGCAATTTCTCGG+CGG 0.742223 8.4:+19236794 MS.gene51059:CDS
GATAACCACCTTCTAAACAG+AGG 0.746597 8.4:-19237423 None:intergenic
ACGTCAGAGGAATGACGACG+TGG 0.747345 8.4:-19237312 None:intergenic
TTTCCATAGAGATTTCGCGG+TGG 0.768966 8.4:-19237488 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAATGATAAGAAATTT+GGG + chr8.4:19235910-19235929 MS.gene51059:CDS 10.0%
!! GTTTATAATGATAAGAAATT+TGG + chr8.4:19235909-19235928 MS.gene51059:CDS 15.0%
!!! TTTTTATATGTTGTTTTGAT+TGG + chr8.4:19238302-19238321 MS.gene51059:CDS 15.0%
! AATGATAAGAAATTTGGGAA+TGG + chr8.4:19235915-19235934 MS.gene51059:CDS 25.0%
! AATTCTTCATCTAATTCATC+TGG - chr8.4:19238404-19238423 None:intergenic 25.0%
! CAAAACAACATATAAAAACC+CGG - chr8.4:19238300-19238319 None:intergenic 25.0%
! TTTGCTTCATATACTTTACT+TGG + chr8.4:19238241-19238260 MS.gene51059:CDS 25.0%
!! GTATACGAATTTTACCTATA+CGG - chr8.4:19237786-19237805 None:intergenic 25.0%
!!! ATGTTGTTTTGATTGGAATA+TGG + chr8.4:19238309-19238328 MS.gene51059:CDS 25.0%
AAGATTATGAAGAGACCTAA+TGG + chr8.4:19236452-19236471 MS.gene51059:CDS 30.0%
AGAGCTACAAAATTGTTCAT+TGG + chr8.4:19238572-19238591 MS.gene51059:CDS 30.0%
ATGGAAAAATCCAGTTACAA+CGG + chr8.4:19238217-19238236 MS.gene51059:CDS 30.0%
ATTCTTGAACTTGGAATCTT+AGG + chr8.4:19237523-19237542 MS.gene51059:CDS 30.0%
GGTTAGATGATATAAGAAGA+TGG + chr8.4:19238198-19238217 MS.gene51059:CDS 30.0%
TTAAATCTGGATACCAAACA+AGG - chr8.4:19238268-19238287 None:intergenic 30.0%
! ATGAACAATTTTGTAGCTCT+TGG - chr8.4:19238572-19238591 None:intergenic 30.0%
! ATTAGAGTGAAGGTACAATT+AGG + chr8.4:19237133-19237152 MS.gene51059:CDS 30.0%
! ATTGGTTCAACTAGATCATA+GGG - chr8.4:19236551-19236570 None:intergenic 30.0%
! CAAGAATCATTTTCTTGGTA+GGG + chr8.4:19235947-19235966 MS.gene51059:CDS 30.0%
! TGAACAATTTTGTAGCTCTT+GGG - chr8.4:19238571-19238590 None:intergenic 30.0%
! TTAGAGTGAAGGTACAATTA+GGG + chr8.4:19237134-19237153 MS.gene51059:CDS 30.0%
!!! AGAAGAAAAGTGTTTTCAGT+TGG + chr8.4:19236033-19236052 MS.gene51059:CDS 30.0%
AAGAAATTTGGGAATGGTAG+TGG + chr8.4:19235921-19235940 MS.gene51059:CDS 35.0%
ACAACATATAAAAACCCGGT+TGG - chr8.4:19238296-19238315 None:intergenic 35.0%
ATACAACTTTCCGTTTGGAT+CGG + chr8.4:19236938-19236957 MS.gene51059:CDS 35.0%
ATCTTCGTCATCCAATGTTT+AGG + chr8.4:19238669-19238688 MS.gene51059:CDS 35.0%
ATGAAGAGACCTAATGGTAA+CGG + chr8.4:19236458-19236477 MS.gene51059:CDS 35.0%
CACAAGTTCATATCCATTAC+TGG + chr8.4:19237837-19237856 MS.gene51059:CDS 35.0%
CAGATTTAATTGTTCCAACC+GGG + chr8.4:19238279-19238298 MS.gene51059:CDS 35.0%
CCAGATTTAATTGTTCCAAC+CGG + chr8.4:19238278-19238297 MS.gene51059:CDS 35.0%
CTAACAAACAGATACTGCAT+TGG - chr8.4:19236569-19236588 None:intergenic 35.0%
CTGAAAAAGTTCAAACTAGC+CGG - chr8.4:19238707-19238726 None:intergenic 35.0%
GTTATGACAGGTAAGAATGT+TGG + chr8.4:19238468-19238487 MS.gene51059:intron 35.0%
TACTTTACTTGGTCCTTGTT+TGG + chr8.4:19238252-19238271 MS.gene51059:CDS 35.0%
TCTTCAAACTCCATATTCTC+CGG - chr8.4:19235876-19235895 None:intergenic 35.0%
TGAGGAAAAGTAAAGCCAAT+TGG + chr8.4:19238129-19238148 MS.gene51059:CDS 35.0%
TGAGGAAAATGCAAACAATG+AGG + chr8.4:19236417-19236436 MS.gene51059:CDS 35.0%
TGCCACAATTCTAAACCAAT+TGG - chr8.4:19238147-19238166 None:intergenic 35.0%
TTTATCAATCACCGAAGCTT+TGG + chr8.4:19237035-19237054 MS.gene51059:CDS 35.0%
! AGCCAATTGGTTTAGAATTG+TGG + chr8.4:19238142-19238161 MS.gene51059:CDS 35.0%
! AGTTGGATTAGAGGTGAAAT+CGG + chr8.4:19236050-19236069 MS.gene51059:CDS 35.0%
! ATTTTACCTATACGGCAATC+TGG - chr8.4:19237778-19237797 None:intergenic 35.0%
! GCAAGAATCATTTTCTTGGT+AGG + chr8.4:19235946-19235965 MS.gene51059:CDS 35.0%
! TCTGTTTGTTAGAATCGTGA+AGG + chr8.4:19236577-19236596 MS.gene51059:CDS 35.0%
! TGATGATGATACTGCATTTC+CGG - chr8.4:19236386-19236405 None:intergenic 35.0%
!! AGTGTTTTCAGTTGGATTAG+AGG + chr8.4:19236041-19236060 MS.gene51059:CDS 35.0%
!! AGTTTATCAGGTTGAACAGA+TGG + chr8.4:19236235-19236254 MS.gene51059:CDS 35.0%
!! CATTGGTTCAACTAGATCAT+AGG - chr8.4:19236552-19236571 None:intergenic 35.0%
!! GTAGTGCATTTTGGAAGTAA+TGG - chr8.4:19237964-19237983 None:intergenic 35.0%
AAAAAGTTCAAACTAGCCGG+AGG - chr8.4:19238704-19238723 None:intergenic 40.0%
AAAATGGTTGCTGTGGCTTT+AGG + chr8.4:19238638-19238657 MS.gene51059:CDS 40.0%
AATCTTGTATCCATACCAGC+TGG - chr8.4:19238359-19238378 None:intergenic 40.0%
AATGGGTGAAATCGAGTTAG+CGG + chr8.4:19237885-19237904 MS.gene51059:CDS 40.0%
ACATGTGTCAGGAAAAAACC+CGG - chr8.4:19237926-19237945 None:intergenic 40.0%
ACTCTCAGATACCAAAGCTT+CGG - chr8.4:19237049-19237068 None:intergenic 40.0%
AGGTTTCCATAGAGATTTCG+CGG - chr8.4:19237494-19237513 None:intergenic 40.0%
AGTTCAAGAATTCCAACTGG+AGG - chr8.4:19237514-19237533 None:intergenic 40.0%
CAATCACAGAGAACAAGAAG+AGG + chr8.4:19237160-19237179 MS.gene51059:CDS 40.0%
CCAAGTTCAAGAATTCCAAC+TGG - chr8.4:19237517-19237536 None:intergenic 40.0%
CCAGTTGGAATTCTTGAACT+TGG + chr8.4:19237514-19237533 MS.gene51059:CDS 40.0%
CCAGTTGTCAAATACACCTA+CGG - chr8.4:19237725-19237744 None:intergenic 40.0%
CCGGTTGGAACAATTAAATC+TGG - chr8.4:19238281-19238300 None:intergenic 40.0%
CGAAACGGCTTGAAGAAAAT+GGG + chr8.4:19237868-19237887 MS.gene51059:CDS 40.0%
CTATCTGGAGAATCACGAAT+AGG - chr8.4:19236845-19236864 None:intergenic 40.0%
CTATTCAGTGCCTCCTAAAA+TGG + chr8.4:19238622-19238641 MS.gene51059:CDS 40.0%
CTGGTATCTTGGGTCTAAAA+CGG - chr8.4:19238340-19238359 None:intergenic 40.0%
CTTCAAACTCCATATTCTCC+GGG - chr8.4:19235875-19235894 None:intergenic 40.0%
CTTCGGTGATTGATAAACCT+TGG - chr8.4:19237032-19237051 None:intergenic 40.0%
CTTCTTCCGATGAAATCCAA+GGG + chr8.4:19237556-19237575 MS.gene51059:CDS 40.0%
CTTGGTAGGGTTAAGCTTTA+TGG + chr8.4:19235960-19235979 MS.gene51059:CDS 40.0%
GAAAAACCAGATTGCCGTAT+AGG + chr8.4:19237769-19237788 MS.gene51059:CDS 40.0%
GAACTTCCTTGACCATCTTT+GGG - chr8.4:19235744-19235763 None:intergenic 40.0%
GATAACCACCTTCTAAACAG+AGG - chr8.4:19237426-19237445 None:intergenic 40.0%
GGCCAAGTATGGCAAAAAAT+GGG + chr8.4:19237612-19237631 MS.gene51059:CDS 40.0%
GTAGATTCGGAGTTAGATTC+AGG - chr8.4:19237093-19237112 None:intergenic 40.0%
GTATCTGAGAGTAACAGTCA+TGG + chr8.4:19237057-19237076 MS.gene51059:CDS 40.0%
GTTTGAAGAGCTTGAAGTTG+AGG + chr8.4:19235887-19235906 MS.gene51059:CDS 40.0%
TACGTTGGAGATTTCCGTTT+GGG + chr8.4:19236766-19236785 MS.gene51059:CDS 40.0%
TCACCATTACCGTTACCATT+AGG - chr8.4:19236470-19236489 None:intergenic 40.0%
TCACCTACAGAGCAATTTCT+CGG + chr8.4:19236791-19236810 MS.gene51059:CDS 40.0%
TCGAAACGGCTTGAAGAAAA+TGG + chr8.4:19237867-19237886 MS.gene51059:CDS 40.0%
TCTTCTTCCGATGAAATCCA+AGG + chr8.4:19237555-19237574 MS.gene51059:CDS 40.0%
TCTTGTTGAACACGAACTAC+CGG - chr8.4:19236329-19236348 None:intergenic 40.0%
TGAAGAGGGAAGAGTTTATC+AGG + chr8.4:19236223-19236242 MS.gene51059:CDS 40.0%
TGAAGCAAAACCGTTGTAAC+TGG - chr8.4:19238230-19238249 None:intergenic 40.0%
TGGCCAAGTATGGCAAAAAA+TGG + chr8.4:19237611-19237630 MS.gene51059:CDS 40.0%
TGTACCTTCACTCTAATCTC+CGG - chr8.4:19237130-19237149 None:intergenic 40.0%
TTAAAGAACTCAACCCGGTT+TGG + chr8.4:19235820-19235839 MS.gene51059:CDS 40.0%
TTATCACGTGCTTGATGAAG+CGG + chr8.4:19237441-19237460 MS.gene51059:CDS 40.0%
TTCTTCCCGGAGATATCTTT+CGG - chr8.4:19236500-19236519 None:intergenic 40.0%
TTGTAGAGGTGAAGAAGCTT+TGG + chr8.4:19235995-19236014 MS.gene51059:CDS 40.0%
TTTGGAAGAATCACCTTCTC+CGG + chr8.4:19236307-19236326 MS.gene51059:CDS 40.0%
! AAAGCCACAGCAACCATTTT+AGG - chr8.4:19238638-19238657 None:intergenic 40.0%
! AATTGTGGCAGTGTTAGCTT+GGG + chr8.4:19238157-19238176 MS.gene51059:CDS 40.0%
! GGAACACAGTTTTCTTGTAG+AGG + chr8.4:19235981-19236000 MS.gene51059:CDS 40.0%
! GGTCGCAAGAATCATTTTCT+TGG + chr8.4:19235942-19235961 MS.gene51059:CDS 40.0%
! TGGACGAATGTAGTGCATTT+TGG - chr8.4:19237973-19237992 None:intergenic 40.0%
! TGGGTGATTTTTGCAACACA+AGG + chr8.4:19238512-19238531 MS.gene51059:intron 40.0%
! TTTCGAGTCAGAACCAGTAA+TGG - chr8.4:19237853-19237872 None:intergenic 40.0%
! TTTTGCAACACAAGGTGAGA+GGG + chr8.4:19238520-19238539 MS.gene51059:intron 40.0%
! TTTTTGCAACACAAGGTGAG+AGG + chr8.4:19238519-19238538 MS.gene51059:intron 40.0%
!! AGACCTAATGGTAACGGTAA+TGG + chr8.4:19236464-19236483 MS.gene51059:CDS 40.0%
!! ATCGGTTTTGCTGTAACCAA+GGG - chr8.4:19236735-19236754 None:intergenic 40.0%
!! TTACTGGTTCTGACTCGAAA+CGG + chr8.4:19237853-19237872 MS.gene51059:CDS 40.0%
!!! GACCCATTTTTTGCCATACT+TGG - chr8.4:19237617-19237636 None:intergenic 40.0%
!!! GTTTTTTCCTGACACATGTG+CGG + chr8.4:19237927-19237946 MS.gene51059:intron 40.0%
AAATCCAAGGGTCCAGGAAA+AGG + chr8.4:19237568-19237587 MS.gene51059:CDS 45.0%
AAATGGTTCCCGTTAGAAGG+TGG + chr8.4:19237373-19237392 MS.gene51059:CDS 45.0%
AACCTAACGGTGAATCTGAG+AGG + chr8.4:19236519-19236538 MS.gene51059:CDS 45.0%
AACGGAAAGTTGTATGTCGC+CGG - chr8.4:19236933-19236952 None:intergenic 45.0%
AATCCAAGGGTCCAGGAAAA+GGG + chr8.4:19237569-19237588 MS.gene51059:CDS 45.0%
AATGGTTCCCGTTAGAAGGT+GGG + chr8.4:19237374-19237393 MS.gene51059:CDS 45.0%
ACCTTCTAACGGGAACCATT+TGG - chr8.4:19237374-19237393 None:intergenic 45.0%
ACTCACATGCTTGGAGTATG+AGG + chr8.4:19238111-19238130 MS.gene51059:CDS 45.0%
AGAGGAACAATCACAGTCAC+AGG + chr8.4:19236186-19236205 MS.gene51059:CDS 45.0%
AGGACCATGGAATCTTCTAG+TGG - chr8.4:19237250-19237269 None:intergenic 45.0%
ATAGTCCTCTTGCTCCACAA+TGG + chr8.4:19236861-19236880 MS.gene51059:CDS 45.0%
ATCATCATCATCCTGACGTG+AGG + chr8.4:19236399-19236418 MS.gene51059:CDS 45.0%
ATCCATACCAGCTGGTATCT+TGG - chr8.4:19238351-19238370 None:intergenic 45.0%
ATCCTCTCAGATTCACCGTT+AGG - chr8.4:19236524-19236543 None:intergenic 45.0%
ATCTCCGGGAAGAAACCTAA+CGG + chr8.4:19236506-19236525 MS.gene51059:CDS 45.0%
ATCTTCTACGAGAAGGACCA+TGG - chr8.4:19237263-19237282 None:intergenic 45.0%
ATGCACTACATTCGTCCACT+TGG + chr8.4:19237975-19237994 MS.gene51059:intron 45.0%
ATGTGTCAGGAAAAAACCCG+GGG - chr8.4:19237924-19237943 None:intergenic 45.0%
CATGTGTCAGGAAAAAACCC+GGG - chr8.4:19237925-19237944 None:intergenic 45.0%
CCGGTTTAAAGAACTCAACC+CGG + chr8.4:19235815-19235834 MS.gene51059:CDS 45.0%
CCGTAGGTGTATTTGACAAC+TGG + chr8.4:19237722-19237741 MS.gene51059:CDS 45.0%
CGAGGTTGTTCGATACATGT+TGG + chr8.4:19238082-19238101 MS.gene51059:CDS 45.0%
CTACGTTGGAGATTTCCGTT+TGG + chr8.4:19236765-19236784 MS.gene51059:CDS 45.0%
CTCTGTAGGTGAATCCCAAA+CGG - chr8.4:19236783-19236802 None:intergenic 45.0%
CTTCTTCCCAAAGATGGTCA+AGG + chr8.4:19235735-19235754 MS.gene51059:CDS 45.0%
GAATTGTGGCAGTGTTAGCT+TGG + chr8.4:19238156-19238175 MS.gene51059:CDS 45.0%
GCAAAAACCTGGTTCCATTC+CGG - chr8.4:19236713-19236732 None:intergenic 45.0%
GCGACATACAACTTTCCGTT+TGG + chr8.4:19236933-19236952 MS.gene51059:CDS 45.0%
GGAACTTCCTTGACCATCTT+TGG - chr8.4:19235745-19235764 None:intergenic 45.0%
GGATTGAGTTCCGATCCAAA+CGG - chr8.4:19236951-19236970 None:intergenic 45.0%
GTGAAATCGAGTTAGCGGTT+CGG + chr8.4:19237890-19237909 MS.gene51059:intron 45.0%
GTTAGAATCGTGAAGGTTCG+CGG + chr8.4:19236584-19236603 MS.gene51059:CDS 45.0%
GTTGAGTTCTTTAAACCGGG+TGG - chr8.4:19235814-19235833 None:intergenic 45.0%
TAACGAACCCGAACCAAATC+AGG - chr8.4:19238452-19238471 None:intergenic 45.0%
TACAGCAAAACCGATGCAAC+CGG + chr8.4:19236740-19236759 MS.gene51059:CDS 45.0%
TAGCTCCAAACCACCTGATT+TGG + chr8.4:19238436-19238455 MS.gene51059:CDS 45.0%
TCAAGCAACTCGTTCCAAAC+CGG - chr8.4:19235837-19235856 None:intergenic 45.0%
TCCATACCAGCTGGTATCTT+GGG - chr8.4:19238350-19238369 None:intergenic 45.0%
TCCGAATCTACCACCGTTAA+CGG + chr8.4:19237102-19237121 MS.gene51059:CDS 45.0%
TCTCTATGGAAACCTCCAGT+TGG + chr8.4:19237499-19237518 MS.gene51059:CDS 45.0%
TCTTACTGTGTGGCCAAGTA+TGG + chr8.4:19237601-19237620 MS.gene51059:CDS 45.0%
TGAGCCACTAGAAGATTCCA+TGG + chr8.4:19237243-19237262 MS.gene51059:CDS 45.0%
TGAGTTCATCGTTTCTGACC+CGG + chr8.4:19235854-19235873 MS.gene51059:CDS 45.0%
TGATAAACCGCACATGTGTC+AGG - chr8.4:19237937-19237956 None:intergenic 45.0%
TGATACTGCATTTCCGGTTC+CGG - chr8.4:19236380-19236399 None:intergenic 45.0%
TGATCTGACGTAGTGACTTG+AGG - chr8.4:19236651-19236670 None:intergenic 45.0%
TGTAACCAAGGGCAAAAACC+TGG - chr8.4:19236724-19236743 None:intergenic 45.0%
TTAGAATCGTGAAGGTTCGC+GGG + chr8.4:19236585-19236604 MS.gene51059:CDS 45.0%
TTCAACAAGATCCACCGTTG+CGG + chr8.4:19236339-19236358 MS.gene51059:CDS 45.0%
TTCACCGTTAGGTTTCTTCC+CGG - chr8.4:19236513-19236532 None:intergenic 45.0%
TTCCATAGAGATTTCGCGGT+GGG - chr8.4:19237490-19237509 None:intergenic 45.0%
TTTAGACCCAAGATACCAGC+TGG + chr8.4:19238341-19238360 MS.gene51059:CDS 45.0%
TTTCCATAGAGATTTCGCGG+TGG - chr8.4:19237491-19237510 None:intergenic 45.0%
! AAATCAGGTGGTTTGGAGCT+AGG - chr8.4:19238437-19238456 None:intergenic 45.0%
! AGGTAAGAATGTTGGCTGCA+AGG + chr8.4:19238476-19238495 MS.gene51059:intron 45.0%
! AGGTTCTAACCTTCACGAAC+GGG - chr8.4:19236631-19236650 None:intergenic 45.0%
! CCGGGTTGAGTTCTTTAAAC+CGG - chr8.4:19235818-19235837 None:intergenic 45.0%
! CGGGTTGAGTTCTTTAAACC+GGG - chr8.4:19235817-19235836 None:intergenic 45.0%
! CTTGACCATCTTTGGGAAGA+AGG - chr8.4:19235737-19235756 None:intergenic 45.0%
! GAGGTTCTAACCTTCACGAA+CGG - chr8.4:19236632-19236651 None:intergenic 45.0%
! GGCATTGGGTTCCTAAACAT+TGG - chr8.4:19238683-19238702 None:intergenic 45.0%
! GGTAAGAATGTTGGCTGCAA+GGG + chr8.4:19238477-19238496 MS.gene51059:intron 45.0%
! GTTTGCATTTTCCTCACGTC+AGG - chr8.4:19236413-19236432 None:intergenic 45.0%
!! CAAACCACCTGATTTGGTTC+GGG + chr8.4:19238442-19238461 MS.gene51059:CDS 45.0%
!! CCAAACCACCTGATTTGGTT+CGG + chr8.4:19238441-19238460 MS.gene51059:CDS 45.0%
!! GCAAGGGTGCAAACTGTTTT+GGG + chr8.4:19238493-19238512 MS.gene51059:intron 45.0%
!! GGGTTCAAGCATTGGTTAGT+TGG + chr8.4:19238540-19238559 MS.gene51059:intron 45.0%
!! GTCCACTGATTCTTACTGTG+TGG + chr8.4:19237591-19237610 MS.gene51059:CDS 45.0%
!! TGCAAGGGTGCAAACTGTTT+TGG + chr8.4:19238492-19238511 MS.gene51059:intron 45.0%
!!! CATCGGTTTTGCTGTAACCA+AGG - chr8.4:19236736-19236755 None:intergenic 45.0%
AACTGAAAGCCCGTTCGTGA+AGG + chr8.4:19236619-19236638 MS.gene51059:CDS 50.0%
AATCTTCTCACCGTTTGGGG+CGG - chr8.4:19235687-19235706 None:intergenic 50.0%
ACCCAAGATACCAGCTGGTA+TGG + chr8.4:19238346-19238365 MS.gene51059:CDS 50.0%
AGAGAAAACGAACCACCACC+CGG + chr8.4:19235796-19235815 MS.gene51059:CDS 50.0%
AGGTGAGAGGGTTCAAGCAT+TGG + chr8.4:19238532-19238551 MS.gene51059:intron 50.0%
AGTAGGACCCACCTTCTAAC+GGG - chr8.4:19237384-19237403 None:intergenic 50.0%
AGTCACAGGCATCCGATGAT+GGG + chr8.4:19236200-19236219 MS.gene51059:CDS 50.0%
AGTGAAACGACATGCTGTGG+TGG - chr8.4:19237195-19237214 None:intergenic 50.0%
CAAGCAACTCGTTCCAAACC+GGG - chr8.4:19235836-19235855 None:intergenic 50.0%
CACCTACGCCTCTGTTTAGA+AGG + chr8.4:19237415-19237434 MS.gene51059:CDS 50.0%
CAGTAGGACCCACCTTCTAA+CGG - chr8.4:19237385-19237404 None:intergenic 50.0%
CCAAACGGTGAGAAGATTGG+CGG + chr8.4:19235689-19235708 MS.gene51059:CDS 50.0%
CCACTAAGATGGTAGCTCAG+TGG + chr8.4:19238030-19238049 MS.gene51059:CDS 50.0%
CCACTGAGCTACCATCTTAG+TGG - chr8.4:19238033-19238052 None:intergenic 50.0%
CCGAACCAAATCAGGTGGTT+TGG - chr8.4:19238444-19238463 None:intergenic 50.0%
CCTACAGAGCAATTTCTCGG+CGG + chr8.4:19236794-19236813 MS.gene51059:CDS 50.0%
CCTACGGTTAAGACAGTGCA+AGG - chr8.4:19237709-19237728 None:intergenic 50.0%
CCTGGACCCTTGGATTTCAT+CGG - chr8.4:19237565-19237584 None:intergenic 50.0%
CCTTGCACTGTCTTAACCGT+AGG + chr8.4:19237706-19237725 MS.gene51059:CDS 50.0%
CGAAGCTATCCGTTACGGTT+CGG - chr8.4:19237645-19237664 None:intergenic 50.0%
CGCAACCTTCTTCCCAAAGA+TGG + chr8.4:19235729-19235748 MS.gene51059:CDS 50.0%
CGCCAATCTTCTCACCGTTT+GGG - chr8.4:19235691-19235710 None:intergenic 50.0%
CGTTTCTGACCCGGAGAATA+TGG + chr8.4:19235863-19235882 MS.gene51059:CDS 50.0%
CTACGCCTCTGTTTAGAAGG+TGG + chr8.4:19237418-19237437 MS.gene51059:CDS 50.0%
CTTCCCTCTTCACCCATCAT+CGG - chr8.4:19236215-19236234 None:intergenic 50.0%
GAACGAACAGTACACATGGC+AGG + chr8.4:19237675-19237694 MS.gene51059:CDS 50.0%
GAAGATCTTCTCTTCGTCGC+CGG + chr8.4:19237220-19237239 MS.gene51059:CDS 50.0%
GAAGCTATCCGTTACGGTTC+GGG - chr8.4:19237644-19237663 None:intergenic 50.0%
GAGTTCAGATGCACCATACG+TGG + chr8.4:19236994-19237013 MS.gene51059:CDS 50.0%
GAGTTCTTTAAACCGGGTGG+TGG - chr8.4:19235811-19235830 None:intergenic 50.0%
GATCAAAGCCCGCGAGTTAT+AGG + chr8.4:19236666-19236685 MS.gene51059:CDS 50.0%
GCATCTGAACTCCATGCTTC+TGG - chr8.4:19236986-19237005 None:intergenic 50.0%
GCCAAATGGTTCCCGTTAGA+AGG + chr8.4:19237370-19237389 MS.gene51059:CDS 50.0%
GCCAATCTTCTCACCGTTTG+GGG - chr8.4:19235690-19235709 None:intergenic 50.0%
GCCGTTAACGGTGGTAGATT+CGG - chr8.4:19237106-19237125 None:intergenic 50.0%
GCCTCCTAAAATGGTTGCTG+TGG + chr8.4:19238631-19238650 MS.gene51059:CDS 50.0%
GGAAATCTCCAACGTAGCAC+CGG - chr8.4:19236762-19236781 None:intergenic 50.0%
GGAATCTTCTAGTGGCTCAC+CGG - chr8.4:19237242-19237261 None:intergenic 50.0%
GGCCACACAGTAAGAATCAG+TGG - chr8.4:19237596-19237615 None:intergenic 50.0%
GGTGGAACGAACAGTACACA+TGG + chr8.4:19237671-19237690 MS.gene51059:CDS 50.0%
GTTTAGGAACCCAATGCCTC+CGG + chr8.4:19238685-19238704 MS.gene51059:CDS 50.0%
TAAGATGGTAGCTCAGTGGC+TGG + chr8.4:19238034-19238053 MS.gene51059:CDS 50.0%
TACGCGCCGAAAGATATCTC+CGG + chr8.4:19236491-19236510 MS.gene51059:CDS 50.0%
TAGAAGGTGGGTCCTACTGT+GGG + chr8.4:19237386-19237405 MS.gene51059:CDS 50.0%
TCAACAAGATCCACCGTTGC+GGG + chr8.4:19236340-19236359 MS.gene51059:CDS 50.0%
TCTAACGGGAACCATTTGGC+TGG - chr8.4:19237370-19237389 None:intergenic 50.0%
TCTTCCAAAACCACCACTCG+CGG - chr8.4:19236296-19236315 None:intergenic 50.0%
TGAACACGAACTACCGGAGA+AGG - chr8.4:19236323-19236342 None:intergenic 50.0%
TGGGTCGAAGCTATCCGTTA+CGG - chr8.4:19237650-19237669 None:intergenic 50.0%
TGGTGCGATCTTCTACGAGA+AGG - chr8.4:19237270-19237289 None:intergenic 50.0%
TGTACTGTTCGTTCCACCGT+GGG - chr8.4:19237669-19237688 None:intergenic 50.0%
TGTGGAGCAAGAGGACTATC+TGG - chr8.4:19236860-19236879 None:intergenic 50.0%
TTAGAAGGTGGGTCCTACTG+TGG + chr8.4:19237385-19237404 MS.gene51059:CDS 50.0%
TTCCATTCCGGCGAGTCATT+GGG - chr8.4:19236701-19236720 None:intergenic 50.0%
TTCGTTGGGCCTATAACTCG+CGG - chr8.4:19236678-19236697 None:intergenic 50.0%
! ACCACAGCATGTCGTTTCAC+TGG + chr8.4:19237194-19237213 MS.gene51059:CDS 50.0%
! ACGACGCTTTTCCAGAAGCA+TGG + chr8.4:19236972-19236991 MS.gene51059:CDS 50.0%
! CACCTTCTAAACAGAGGCGT+AGG - chr8.4:19237420-19237439 None:intergenic 50.0%
! CTACATTCGTCCACTTGGTG+TGG + chr8.4:19237980-19237999 MS.gene51059:intron 50.0%
! CTGGCGTATGTTTGCTGATG+TGG + chr8.4:19237741-19237760 MS.gene51059:CDS 50.0%
! CTTCTAAACAGAGGCGTAGG+TGG - chr8.4:19237417-19237436 None:intergenic 50.0%
! GAATCAGTGGACCCTTTTCC+TGG - chr8.4:19237583-19237602 None:intergenic 50.0%
! GCCACAGCAACCATTTTAGG+AGG - chr8.4:19238635-19238654 None:intergenic 50.0%
! TAACGGATAGCTTCGACCCA+CGG + chr8.4:19237650-19237669 MS.gene51059:CDS 50.0%
! TGGAACCAGGTTTTTGCCCT+TGG + chr8.4:19236716-19236735 MS.gene51059:CDS 50.0%
! TGGTTCGGGTTCGTTATGAC+AGG + chr8.4:19238456-19238475 MS.gene51059:CDS 50.0%
! TTCAAACTAGCCGGAGGCAT+TGG - chr8.4:19238698-19238717 None:intergenic 50.0%
! TTCACGAACGGGCTTTCAGT+TGG - chr8.4:19236620-19236639 None:intergenic 50.0%
!! CATCCGATGATGGGTGAAGA+GGG + chr8.4:19236209-19236228 MS.gene51059:CDS 50.0%
!! CATTGTGTGCCACTTCCTGA+CGG + chr8.4:19236260-19236279 MS.gene51059:CDS 50.0%
!! GGGCTGTTGGATTAGCTAAG+TGG + chr8.4:19238177-19238196 MS.gene51059:CDS 50.0%
!! TCAAACTAGCCGGAGGCATT+GGG - chr8.4:19238697-19238716 None:intergenic 50.0%
!! TGCTTCTGGAAAAGCGTCGT+CGG - chr8.4:19236972-19236991 None:intergenic 50.0%
!! TGGATGCTGACTCACATGCT+TGG + chr8.4:19238102-19238121 MS.gene51059:CDS 50.0%
AAAACCACCACTCGCGGTGA+AGG - chr8.4:19236290-19236309 None:intergenic 55.0%
AACCCAATGACTCGCCGGAA+TGG + chr8.4:19236696-19236715 MS.gene51059:CDS 55.0%
AACGGTGAGAAGATTGGCGG+TGG + chr8.4:19235692-19235711 MS.gene51059:CDS 55.0%
AAGTTCCAGCCCTTACGTGG+TGG + chr8.4:19235758-19235777 MS.gene51059:CDS 55.0%
ACCAAGGAAGCGGCGTTACT+CGG + chr8.4:19237289-19237308 MS.gene51059:CDS 55.0%
ACGCGCCGAAAGATATCTCC+GGG + chr8.4:19236492-19236511 MS.gene51059:CDS 55.0%
ACGTCAGAGGAATGACGACG+TGG - chr8.4:19237315-19237334 None:intergenic 55.0%
AGATCGCACCACCAAGGAAG+CGG + chr8.4:19237279-19237298 MS.gene51059:CDS 55.0%
AGGAAGTTCCAGCCCTTACG+TGG + chr8.4:19235755-19235774 MS.gene51059:CDS 55.0%
CAAAACGCCGGTAGAGTCTC+CGG + chr8.4:19236911-19236930 MS.gene51059:CDS 55.0%
CAACGAACCCAATGACTCGC+CGG + chr8.4:19236691-19236710 MS.gene51059:CDS 55.0%
CAATGGTACCGTCTCGAAGG+TGG + chr8.4:19236878-19236897 MS.gene51059:CDS 55.0%
CAGTCACAGGCATCCGATGA+TGG + chr8.4:19236199-19236218 MS.gene51059:CDS 55.0%
CCACAATGGTACCGTCTCGA+AGG + chr8.4:19236875-19236894 MS.gene51059:CDS 55.0%
CCGATGAAATCCAAGGGTCC+AGG + chr8.4:19237562-19237581 MS.gene51059:CDS 55.0%
CCGCCAATCTTCTCACCGTT+TGG - chr8.4:19235692-19235711 None:intergenic 55.0%
CCGCCGAGAAATTGCTCTGT+AGG - chr8.4:19236797-19236816 None:intergenic 55.0%
CCTTCGAGACGGTACCATTG+TGG - chr8.4:19236878-19236897 None:intergenic 55.0%
CGAACCCGAACCAAATCAGG+TGG - chr8.4:19238449-19238468 None:intergenic 55.0%
CGCTGTTCGATTGACGTCAG+AGG - chr8.4:19237328-19237347 None:intergenic 55.0%
CGGTACCATTGTGGAGCAAG+AGG - chr8.4:19236869-19236888 None:intergenic 55.0%
CGTAGAAGATCGCACCACCA+AGG + chr8.4:19237273-19237292 MS.gene51059:CDS 55.0%
CTAATCTCCGGCGCCGTTAA+CGG - chr8.4:19237118-19237137 None:intergenic 55.0%
CTTGGAATCTTAGGCGCTCG+TGG + chr8.4:19237532-19237551 MS.gene51059:CDS 55.0%
GATGTACGCTCAACCGGAAC+CGG + chr8.4:19236364-19236383 MS.gene51059:CDS 55.0%
GCAACGACGCCGTTTCAACA+AGG + chr8.4:19235660-19235679 MS.gene51059:CDS 55.0%
GCCAGTGAAACGACATGCTG+TGG - chr8.4:19237198-19237217 None:intergenic 55.0%
GCCCCAAACGGTGAGAAGAT+TGG + chr8.4:19235686-19235705 MS.gene51059:CDS 55.0%
GGCGAGTCATTGGGTTCGTT+GGG - chr8.4:19236692-19236711 None:intergenic 55.0%
GGTCAGAACCCGAACCGTAA+CGG + chr8.4:19237633-19237652 MS.gene51059:CDS 55.0%
GTCCCACCGCGAAATCTCTA+TGG + chr8.4:19237485-19237504 MS.gene51059:CDS 55.0%
GTGTACTGTTCGTTCCACCG+TGG - chr8.4:19237670-19237689 None:intergenic 55.0%
GTTCCATTCCGGCGAGTCAT+TGG - chr8.4:19236702-19236721 None:intergenic 55.0%
TATGTCGCCGGAGACTCTAC+CGG - chr8.4:19236921-19236940 None:intergenic 55.0%
TCAACAAGGACCGCCCCAAA+CGG + chr8.4:19235674-19235693 MS.gene51059:CDS 55.0%
TCGTTGGGCCTATAACTCGC+GGG - chr8.4:19236677-19236696 None:intergenic 55.0%
TGAGCGTACATCTCCCGCAA+CGG - chr8.4:19236356-19236375 None:intergenic 55.0%
TGGGGCGGTCCTTGTTGAAA+CGG - chr8.4:19235672-19235691 None:intergenic 55.0%
! ACGAACGGGCTTTCAGTTGG+AGG - chr8.4:19236617-19236636 None:intergenic 55.0%
! GCAGTGTTAGCTTGGGCTGT+TGG + chr8.4:19238164-19238183 MS.gene51059:CDS 55.0%
! TAGGTGGACTCTCCCACAGT+AGG - chr8.4:19237401-19237420 None:intergenic 55.0%
! TTCACCGCGAGTGGTGGTTT+TGG + chr8.4:19236289-19236308 MS.gene51059:CDS 55.0%
!! CAACGTAGCACCGGTTGCAT+CGG - chr8.4:19236753-19236772 None:intergenic 55.0%
!! GCATCCGATGATGGGTGAAG+AGG + chr8.4:19236208-19236227 MS.gene51059:CDS 55.0%
ACCATTTGGCTGGCACGTGG+CGG - chr8.4:19237360-19237379 None:intergenic 60.0%
CCAACAGGAGGCTTTACGCG+GGG + chr8.4:19238004-19238023 MS.gene51059:intron 60.0%
CCCAACAGGAGGCTTTACGC+GGG + chr8.4:19238003-19238022 MS.gene51059:intron 60.0%
CCCGCGTAAAGCCTCCTGTT+GGG - chr8.4:19238006-19238025 None:intergenic 60.0%
CGAACAACCTCGTGCCCCAT+CGG - chr8.4:19238074-19238093 None:intergenic 60.0%
CGAAGTCCGCCACCACGTAA+GGG - chr8.4:19235770-19235789 None:intergenic 60.0%
CGGCGAGTCATTGGGTTCGT+TGG - chr8.4:19236693-19236712 None:intergenic 60.0%
GAAGGAGGACCGTCAGGAAG+TGG - chr8.4:19236272-19236291 None:intergenic 60.0%
GAGCGAGTGTGTGCCACGTA+TGG - chr8.4:19237010-19237029 None:intergenic 60.0%
GAGTAACGCCGCTTCCTTGG+TGG - chr8.4:19237290-19237309 None:intergenic 60.0%
GCCCAACAGGAGGCTTTACG+CGG + chr8.4:19238002-19238021 MS.gene51059:intron 60.0%
GCGGGAGATGTACGCTCAAC+CGG + chr8.4:19236358-19236377 MS.gene51059:CDS 60.0%
GGAACCATTTGGCTGGCACG+TGG - chr8.4:19237363-19237382 None:intergenic 60.0%
GGCGCAGCAGAACAAAACGC+CGG + chr8.4:19236899-19236918 MS.gene51059:CDS 60.0%
TCCTGTTGGGCCACACCAAG+TGG - chr8.4:19237993-19238012 None:intergenic 60.0%
TCGAAGTCCGCCACCACGTA+AGG - chr8.4:19235771-19235790 None:intergenic 60.0%
TCTACCACCGTTAACGGCGC+CGG + chr8.4:19237108-19237127 MS.gene51059:CDS 60.0%
TGACTCGCCGGAATGGAACC+AGG + chr8.4:19236703-19236722 MS.gene51059:CDS 60.0%
TTCCAGCCCTTACGTGGTGG+CGG + chr8.4:19235761-19235780 MS.gene51059:CDS 60.0%
! GGACCCTTTTCCTGGACCCT+TGG - chr8.4:19237575-19237594 None:intergenic 60.0%
! GGCGCCGGAGATTAGAGTGA+AGG + chr8.4:19237123-19237142 MS.gene51059:CDS 60.0%
!! ACTTGGTGTGGCCCAACAGG+AGG + chr8.4:19237992-19238011 MS.gene51059:intron 60.0%
!! CGATGCAACCGGTGCTACGT+TGG + chr8.4:19236751-19236770 MS.gene51059:CDS 60.0%
!! TACGTGGTGGCGGACTTCGA+CGG + chr8.4:19235771-19235790 MS.gene51059:CDS 60.0%
!! TCCACTTGGTGTGGCCCAAC+AGG + chr8.4:19237989-19238008 MS.gene51059:intron 60.0%
ACAACCTCGTGCCCCATCGG+AGG - chr8.4:19238071-19238090 None:intergenic 65.0%
ACCACCACTCGCGGTGAAGG+AGG - chr8.4:19236287-19236306 None:intergenic 65.0%
ACCGCCACGTGCCAGCCAAA+TGG + chr8.4:19237356-19237375 MS.gene51059:CDS 65.0%
ACGCGGGGCAGCCACTAAGA+TGG + chr8.4:19238019-19238038 MS.gene51059:CDS 65.0%
ACGGTGGCGCAGAGCAAGAG+AGG + chr8.4:19236168-19236187 MS.gene51059:CDS 65.0%
ATCTCCGGCGCCGTTAACGG+TGG - chr8.4:19237115-19237134 None:intergenic 65.0%
CCCCGCGTAAAGCCTCCTGT+TGG - chr8.4:19238007-19238026 None:intergenic 65.0%
CGGATAGCTTCGACCCACGG+TGG + chr8.4:19237653-19237672 MS.gene51059:CDS 65.0%
CGTGGCACACACTCGCTCCA+AGG + chr8.4:19237012-19237031 MS.gene51059:CDS 65.0%
CTCGCTCAGAGCCTCCGATG+GGG + chr8.4:19238057-19238076 MS.gene51059:CDS 65.0%
CTGCTGCGCCACCTTCGAGA+CGG - chr8.4:19236889-19236908 None:intergenic 65.0%
GCAAGAACAACCACCGCCGC+CGG + chr8.4:19236133-19236152 MS.gene51059:CDS 65.0%
GCCGAGTAACGCCGCTTCCT+TGG - chr8.4:19237293-19237312 None:intergenic 65.0%
GCGTACATCTCCCGCAACGG+TGG - chr8.4:19236353-19236372 None:intergenic 65.0%
GCTCGCTCAGAGCCTCCGAT+GGG + chr8.4:19238056-19238075 MS.gene51059:CDS 65.0%
TCCTCCTTCACCGCGAGTGG+TGG + chr8.4:19236283-19236302 MS.gene51059:CDS 65.0%
AGAACAACCACCGCCGCCGG+AGG + chr8.4:19236136-19236155 MS.gene51059:CDS 70.0%
AGAGCCTCCGATGGGGCACG+AGG + chr8.4:19238064-19238083 MS.gene51059:CDS 70.0%
CGCGGTGAAGGAGGACCGTC+AGG - chr8.4:19236278-19236297 None:intergenic 70.0%
CGGTCCTCCTTCACCGCGAG+TGG + chr8.4:19236280-19236299 MS.gene51059:CDS 70.0%
GGCTCGCTCAGAGCCTCCGA+TGG + chr8.4:19238055-19238074 MS.gene51059:CDS 70.0%
GTCCGCCACCACGTAAGGGC+TGG - chr8.4:19235766-19235785 None:intergenic 70.0%
! CCACCGTGCCGCTCTTCCTC+CGG - chr8.4:19236155-19236174 None:intergenic 70.0%
!! CGGTTCGGTTCGCTTGCCCC+GGG + chr8.4:19237905-19237924 MS.gene51059:intron 70.0%
!! GCGGTTCGGTTCGCTTGCCC+CGG + chr8.4:19237904-19237923 MS.gene51059:intron 70.0%
CACCGCCGCCGGAGGAAGAG+CGG + chr8.4:19236144-19236163 MS.gene51059:CDS 75.0%
CCGCCGGAGGAAGAGCGGCA+CGG + chr8.4:19236149-19236168 MS.gene51059:CDS 75.0%
CCGGAGGAAGAGCGGCACGG+TGG + chr8.4:19236152-19236171 MS.gene51059:CDS 75.0%
TGCCGCTCTTCCTCCGGCGG+CGG - chr8.4:19236149-19236168 None:intergenic 75.0%
! CCGTGCCGCTCTTCCTCCGG+CGG - chr8.4:19236152-19236171 None:intergenic 75.0%
! CGCTCTTCCTCCGGCGGCGG+TGG - chr8.4:19236146-19236165 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 19235651 19238750 19235651 ID=MS.gene51059
chr8.4 mRNA 19235651 19238750 19235651 ID=MS.gene51059.t1;Parent=MS.gene51059
chr8.4 exon 19235651 19237906 19235651 ID=MS.gene51059.t1.exon1;Parent=MS.gene51059.t1
chr8.4 CDS 19235651 19237906 19235651 ID=cds.MS.gene51059.t1;Parent=MS.gene51059.t1
chr8.4 exon 19238011 19238477 19238011 ID=MS.gene51059.t1.exon2;Parent=MS.gene51059.t1
chr8.4 CDS 19238011 19238477 19238011 ID=cds.MS.gene51059.t1;Parent=MS.gene51059.t1
chr8.4 exon 19238559 19238750 19238559 ID=MS.gene51059.t1.exon3;Parent=MS.gene51059.t1
chr8.4 CDS 19238559 19238750 19238559 ID=cds.MS.gene51059.t1;Parent=MS.gene51059.t1
Gene Sequence

>MS.gene51059

ATGAACATGGCAACGACGCCGTTTCAACAAGGACCGCCCCAAACGGTGAGAAGATTGGCGGTGGAAGTTGTTGACGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCCAGCCCTTACGTGGTGGCGGACTTCGACGGTCAGAGAAAACGAACCACCACCCGGTTTAAAGAACTCAACCCGGTTTGGAACGAGTTGCTTGAGTTCATCGTTTCTGACCCGGAGAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGTCGCAAGAATCATTTTCTTGGTAGGGTTAAGCTTTATGGAACACAGTTTTCTTGTAGAGGTGAAGAAGCTTTGGTTTATTATACTTTAGAGAAGAAAAGTGTTTTCAGTTGGATTAGAGGTGAAATCGGTTTGAAGATTTATTACTACGATGAGTTGTTACAGCAAGATGAACATCAGCAGCAGCAGCAGCAAGAACAACCACCGCCGCCGGAGGAAGAGCGGCACGGTGGCGCAGAGCAAGAGAGGAACAATCACAGTCACAGGCATCCGATGATGGGTGAAGAGGGAAGAGTTTATCAGGTTGAACAGATGGAGCATTGTGTGCCACTTCCTGACGGTCCTCCTTCACCGCGAGTGGTGGTTTTGGAAGAATCACCTTCTCCGGTAGTTCGTGTTCAACAAGATCCACCGTTGCGGGAGATGTACGCTCAACCGGAACCGGAAATGCAGTATCATCATCATCATCCTGACGTGAGGAAAATGCAAACAATGAGGAATGATAGAGTGAAGATTATGAAGAGACCTAATGGTAACGGTAATGGTGATTACGCGCCGAAAGATATCTCCGGGAAGAAACCTAACGGTGAATCTGAGAGGATTCATCCCTATGATCTAGTTGAACCAATGCAGTATCTGTTTGTTAGAATCGTGAAGGTTCGCGGGCTTAATCCTCCAACTGAAAGCCCGTTCGTGAAGGTTAGAACCTCAAGTCACTACGTCAGATCAAAGCCCGCGAGTTATAGGCCCAACGAACCCAATGACTCGCCGGAATGGAACCAGGTTTTTGCCCTTGGTTACAGCAAAACCGATGCAACCGGTGCTACGTTGGAGATTTCCGTTTGGGATTCACCTACAGAGCAATTTCTCGGCGGTGTTTGCTTTGATCTTTCTGATGTACCTATTCGTGATTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGTGGCGCAGCAGAACAAAACGCCGGTAGAGTCTCCGGCGACATACAACTTTCCGTTTGGATCGGAACTCAATCCGACGACGCTTTTCCAGAAGCATGGAGTTCAGATGCACCATACGTGGCACACACTCGCTCCAAGGTTTATCAATCACCGAAGCTTTGGTATCTGAGAGTAACAGTCATGGAAGCACAAGACCTGAATCTAACTCCGAATCTACCACCGTTAACGGCGCCGGAGATTAGAGTGAAGGTACAATTAGGGTTTCAATCACAGAGAACAAGAAGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGATCTTCTCTTCGTCGCCGGTGAGCCACTAGAAGATTCCATGGTCCTTCTCGTAGAAGATCGCACCACCAAGGAAGCGGCGTTACTCGGCCACGTCGTCATTCCTCTGACGTCAATCGAACAGCGAATAGACGACCGCCACGTGCCAGCCAAATGGTTCCCGTTAGAAGGTGGGTCCTACTGTGGGAGAGTCCACCTACGCCTCTGTTTAGAAGGTGGTTATCACGTGCTTGATGAAGCGGCGCACGTGTGTAGTGATTTTCGTCCCACCGCGAAATCTCTATGGAAACCTCCAGTTGGAATTCTTGAACTTGGAATCTTAGGCGCTCGTGGTCTTCTTCCGATGAAATCCAAGGGTCCAGGAAAAGGGTCCACTGATTCTTACTGTGTGGCCAAGTATGGCAAAAAATGGGTCAGAACCCGAACCGTAACGGATAGCTTCGACCCACGGTGGAACGAACAGTACACATGGCAGGTATATGATCCTTGCACTGTCTTAACCGTAGGTGTATTTGACAACTGGCGTATGTTTGCTGATGTGGCAGAAGAAAAACCAGATTGCCGTATAGGTAAAATTCGTATACGAGTTTCTACACTAGAGAGCAATAAAATCTACACAAGTTCATATCCATTACTGGTTCTGACTCGAAACGGCTTGAAGAAAATGGGTGAAATCGAGTTAGCGGTTCGGTTCGCTTGCCCCGGGTTTTTTCCTGACACATGTGCGGTTTATCAACAACCATTACTTCCAAAATGCACTACATTCGTCCACTTGGTGTGGCCCAACAGGAGGCTTTACGCGGGGCAGCCACTAAGATGGTAGCTCAGTGGCTGGCTCGCTCAGAGCCTCCGATGGGGCACGAGGTTGTTCGATACATGTTGGATGCTGACTCACATGCTTGGAGTATGAGGAAAAGTAAAGCCAATTGGTTTAGAATTGTGGCAGTGTTAGCTTGGGCTGTTGGATTAGCTAAGTGGTTAGATGATATAAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTTTACTTGGTCCTTGTTTGGTATCCAGATTTAATTGTTCCAACCGGGTTTTTATATGTTGTTTTGATTGGAATATGGTATTTCCGTTTTAGACCCAAGATACCAGCTGGTATGGATACAAGATTATCACAAGCTGAAGCTGTTGATCCAGATGAATTAGATGAAGAATTTGACACAATGCCTAGCTCCAAACCACCTGATTTGGTTCGGGTTCGTTATGACAGGTAAGAATGTTGGCTGCAAGGGTGCAAACTGTTTTGGGTGATTTTTGCAACACAAGGTGAGAGGGTTCAAGCATTGGTTAGTTGGAGAGACCCAAGAGCTACAAAATTGTTCATTGGAGTGTGTCTTGTTATTGCTATTATACTCTATTCAGTGCCTCCTAAAATGGTTGCTGTGGCTTTAGGATTCTACTATCTTCGTCATCCAATGTTTAGGAACCCAATGCCTCCGGCTAGTTTGAACTTTTTCAGAAGACTTCCTAGTTTGTCTGATAG

Protein sequence

>MS.gene51059.t1

MNMATTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNELLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSCRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQDEHQQQQQQEQPPPPEEERHGGAEQERNNHSHRHPMMGEEGRVYQVEQMEHCVPLPDGPPSPRVVVLEESPSPVVRVQQDPPLREMYAQPEPEMQYHHHHPDVRKMQTMRNDRVKIMKRPNGNGNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASYRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNAGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTAPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDSYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAEEKPDCRIGKIRIRVSTLESNKIYTSSYPLLVLTRNGLKKMGEIELAEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYFRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLVRVRYDSWRDPRATKLFIGVCLVIAIILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSD