AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51085

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51085.t1 MTR_5g083340 94.258 418 12 2 1 417 1 407 0.0 813
MS.gene51085.t1 MTR_5g083330 52.727 385 91 8 36 417 3 299 4.27e-112 331
MS.gene51085.t1 MTR_5g083320 54.945 182 38 5 24 205 24 161 2.04e-50 168
MS.gene51085.t1 MTR_0939s0010 53.807 197 86 4 24 218 4 197 4.75e-47 160
MS.gene51085.t1 MTR_2g089170 71.074 121 35 0 24 144 4 124 5.89e-44 152
MS.gene51085.t1 MTR_7g070220 60.741 135 40 3 19 140 6 140 9.65e-43 157
MS.gene51085.t1 MTR_7g092190 64.773 88 31 0 60 147 5 92 3.62e-34 129
MS.gene51085.t1 MTR_1g023170 67.416 89 28 1 57 144 11 99 1.44e-30 119
MS.gene51085.t1 MTR_3g112440 71.264 87 24 1 59 144 12 98 9.72e-29 112
MS.gene51085.t1 MTR_5g082950 66.176 68 23 0 73 140 54 121 8.05e-24 101
MS.gene51085.t1 MTR_8g090350 37.931 145 85 2 72 215 100 240 5.47e-23 98.6
MS.gene51085.t1 MTR_2g435590 61.429 70 27 0 73 142 84 153 5.99e-23 97.8
MS.gene51085.t1 MTR_5g062700 61.250 80 31 0 66 145 154 233 6.71e-23 99.8
MS.gene51085.t1 MTR_4g086165 66.667 63 21 0 83 145 80 142 1.82e-22 95.1
MS.gene51085.t1 MTR_5g009620 42.188 128 68 3 28 150 53 179 7.09e-22 95.9
MS.gene51085.t1 MTR_4g086220 67.213 61 20 0 85 145 96 156 9.16e-22 93.6
MS.gene51085.t1 MTR_3g102100 57.971 69 29 0 75 143 35 103 1.44e-21 91.7
MS.gene51085.t1 MTR_4g086160 65.574 61 21 0 85 145 96 156 2.31e-21 92.4
MS.gene51085.t1 MTR_3g074130 60.000 80 30 1 72 149 135 214 2.70e-21 94.7
MS.gene51085.t1 MTR_4g008860 65.000 60 21 0 82 141 5 64 3.94e-21 90.9
MS.gene51085.t1 MTR_5g016750 55.000 80 34 1 66 143 4 83 5.83e-21 90.1
MS.gene51085.t1 MTR_7g020980 65.517 58 20 0 85 142 51 108 6.35e-21 89.7
MS.gene51085.t1 MTR_7g021010 65.517 58 20 0 85 142 51 108 6.54e-21 89.7
MS.gene51085.t1 MTR_4g086190 67.797 59 19 0 85 143 96 154 8.51e-21 90.9
MS.gene51085.t1 MTR_7g046260 51.220 82 40 0 63 144 39 120 9.88e-21 90.9
MS.gene51085.t1 MTR_1g087920 57.971 69 29 0 82 150 74 142 1.06e-20 92.4
MS.gene51085.t1 MTR_7g021010 65.517 58 20 0 85 142 12 69 1.13e-20 87.8
MS.gene51085.t1 MTR_2g105380 62.295 61 23 0 82 142 114 174 1.25e-20 93.2
MS.gene51085.t1 MTR_2g101340 49.451 91 42 1 54 144 14 100 1.61e-20 89.7
MS.gene51085.t1 MTR_3g090760 54.321 81 37 0 60 140 88 168 2.86e-20 92.0
MS.gene51085.t1 MTR_8g022820 57.353 68 29 0 75 142 113 180 2.89e-20 92.0
MS.gene51085.t1 MTR_8g022820 62.295 61 23 0 82 142 121 181 3.12e-20 92.0
MS.gene51085.t1 MTR_8g022820 62.295 61 23 0 82 142 121 181 3.12e-20 92.0
MS.gene51085.t1 MTR_2g090235 41.045 134 67 3 85 214 218 343 4.53e-20 92.0
MS.gene51085.t1 MTR_6g088405 65.000 60 21 0 85 144 44 103 4.63e-20 88.6
MS.gene51085.t1 MTR_5g012910 61.667 60 23 0 85 144 28 87 7.15e-20 87.0
MS.gene51085.t1 MTR_3g110205 40.179 112 59 2 85 196 43 146 7.52e-20 87.0
MS.gene51085.t1 MTR_3g106290 63.333 60 22 0 82 141 5 64 8.27e-20 87.0
MS.gene51085.t1 MTR_8g006815 46.067 89 47 1 83 170 94 182 8.49e-20 87.4
MS.gene51085.t1 MTR_1g019110 62.712 59 22 0 85 143 44 102 1.44e-19 86.3
MS.gene51085.t1 MTR_4g078710 51.190 84 37 1 81 160 24 107 3.02e-19 86.3
MS.gene51085.t1 MTR_1g090170 61.017 59 23 0 85 143 152 210 4.74e-19 87.8
MS.gene51085.t1 MTR_1g048610 72.414 58 15 1 85 141 89 146 5.19e-19 85.9
MS.gene51085.t1 MTR_1g090170 61.017 59 23 0 85 143 239 297 5.31e-19 88.6
MS.gene51085.t1 MTR_8g092460 62.712 59 22 0 84 142 144 202 1.07e-18 86.7
MS.gene51085.t1 MTR_4g010640 60.606 66 25 1 84 149 6 70 1.17e-18 84.3
MS.gene51085.t1 MTR_8g102800 61.667 60 23 0 85 144 37 96 1.41e-18 84.7
MS.gene51085.t1 MTR_2g014340 61.667 60 23 0 82 141 16 75 1.49e-18 84.0
MS.gene51085.t1 MTR_4g114570 63.793 58 21 0 84 141 6 63 1.99e-18 84.0
MS.gene51085.t1 MTR_1g070070 60.870 69 24 2 82 149 18 84 2.28e-18 81.6
MS.gene51085.t1 MTR_8g006410 62.712 59 22 0 85 143 52 110 2.71e-18 83.2
MS.gene51085.t1 MTR_3g053690 60.000 60 24 0 82 141 24 83 3.38e-18 83.6
MS.gene51085.t1 MTR_2g014300 59.677 62 25 0 80 141 10 71 3.38e-18 82.0
MS.gene51085.t1 MTR_2g015040 61.290 62 23 1 81 141 59 120 3.58e-18 81.6
MS.gene51085.t1 MTR_1g014860 35.821 134 65 3 77 189 13 146 3.65e-18 83.2
MS.gene51085.t1 MTR_8g013860 59.016 61 25 0 85 145 47 107 3.76e-18 82.8
MS.gene51085.t1 MTR_8g006840 60.606 66 23 2 85 147 125 190 4.08e-18 82.8
MS.gene51085.t1 MTR_7g117690 60.345 58 23 0 85 142 28 85 4.48e-18 81.6
MS.gene51085.t1 MTR_1g028560 51.852 81 38 1 82 161 112 192 4.55e-18 85.5
MS.gene51085.t1 MTR_8g099215 40.351 114 56 2 59 168 89 194 5.23e-18 84.7
MS.gene51085.t1 MTR_4g100650 61.667 60 23 0 85 144 74 133 5.43e-18 83.6
MS.gene51085.t1 MTR_2g103700 63.793 58 21 0 84 141 6 63 6.04e-18 81.6
MS.gene51085.t1 MTR_4g100380 56.410 78 25 2 65 141 133 202 6.11e-18 83.6
MS.gene51085.t1 MTR_4g100450 72.414 58 15 1 85 141 154 211 6.16e-18 84.3
MS.gene51085.t1 MTR_4g100420 42.188 128 53 4 16 141 106 214 8.43e-18 84.0
MS.gene51085.t1 MTR_1g014780 53.731 67 30 1 77 142 29 95 9.06e-18 82.4
MS.gene51085.t1 MTR_7g096750 67.797 59 18 1 84 141 19 77 9.42e-18 79.7
MS.gene51085.t1 MTR_2g078680 60.000 60 24 0 82 141 28 87 1.48e-17 81.3
MS.gene51085.t1 MTR_5g008790 52.857 70 31 1 84 151 17 86 1.48e-17 80.1
MS.gene51085.t1 MTR_4g088005 60.656 61 23 1 82 141 54 114 1.87e-17 78.6
MS.gene51085.t1 MTR_7g096700 62.121 66 24 1 84 148 19 84 2.64e-17 78.6
MS.gene51085.t1 MTR_1g074230 60.000 75 25 2 69 142 7 77 2.87e-17 78.6
MS.gene51085.t1 MTR_1g074310 56.164 73 28 2 73 141 6 78 2.99e-17 78.6
MS.gene51085.t1 MTR_5g032820 64.912 57 20 0 84 140 45 101 3.50e-17 82.8
MS.gene51085.t1 MTR_8g027465 53.623 69 30 1 74 142 30 96 4.07e-17 79.3
MS.gene51085.t1 MTR_5g075570 54.930 71 31 1 85 155 124 193 4.57e-17 81.3
MS.gene51085.t1 MTR_4g054360 55.556 72 27 2 85 155 124 191 4.63e-17 81.3
MS.gene51085.t1 MTR_7g081815 59.016 61 24 1 84 143 60 120 4.84e-17 79.7
MS.gene51085.t1 MTR_4g054740 54.054 74 29 2 85 157 97 166 5.73e-17 80.1
MS.gene51085.t1 MTR_7g081805 59.016 61 24 1 84 143 60 120 8.76e-17 79.0
MS.gene51085.t1 MTR_2g015050 52.439 82 35 2 61 141 113 191 9.77e-17 80.5
MS.gene51085.t1 MTR_4g111915 50.000 70 33 1 82 149 50 119 1.01e-16 77.0
MS.gene51085.t1 MTR_7g085810 51.351 74 36 0 67 140 12 85 1.04e-16 80.1
MS.gene51085.t1 MTR_1g014820 52.239 67 31 1 77 142 18 84 1.18e-16 79.7
MS.gene51085.t1 MTR_7g081795 46.429 84 44 1 61 143 36 119 1.71e-16 78.2
MS.gene51085.t1 MTR_8g006825 55.738 61 26 1 84 143 95 155 1.90e-16 78.2
MS.gene51085.t1 MTR_4g119270 53.333 75 30 1 66 140 39 108 3.17e-16 79.7
MS.gene51085.t1 MTR_7g084370 63.158 57 21 0 84 140 41 97 3.26e-16 79.0
MS.gene51085.t1 MTR_2g019750 48.780 82 37 1 59 140 29 105 3.89e-16 79.0
MS.gene51085.t1 MTR_1g014800 53.448 58 27 0 85 142 31 88 4.48e-16 77.4
MS.gene51085.t1 MTR_4g112490 50.000 70 33 1 82 149 50 119 4.50e-16 77.0
MS.gene51085.t1 MTR_1g101600 62.069 58 22 0 85 142 41 98 5.96e-16 76.6
MS.gene51085.t1 MTR_6g465850 34.559 136 83 2 85 214 63 198 8.86e-16 77.8
MS.gene51085.t1 MTR_7g096810 50.000 92 43 3 72 162 1 90 8.98e-16 73.9
MS.gene51085.t1 MTR_8g069360 49.296 71 34 1 84 152 43 113 1.03e-15 79.0
MS.gene51085.t1 MTR_6g466130 40.404 99 54 1 44 142 30 123 1.04e-15 76.6
MS.gene51085.t1 MTR_1g079630 51.316 76 21 1 65 140 4 63 1.05e-15 74.3
MS.gene51085.t1 MTR_1g070035 45.652 92 42 2 68 151 53 144 1.28e-15 75.9
MS.gene51085.t1 MTR_6g465460 39.837 123 63 2 63 179 37 154 1.62e-15 76.6
MS.gene51085.t1 MTR_1g090290 63.793 58 20 1 85 141 113 170 1.66e-15 75.1
MS.gene51085.t1 MTR_6g088425 65.000 60 21 0 85 144 49 108 2.08e-15 75.9
MS.gene51085.t1 MTR_5g085100 51.429 70 34 0 72 141 33 102 2.11e-15 76.6
MS.gene51085.t1 MTR_1g070020 39.024 123 61 2 82 190 67 189 2.20e-15 75.1
MS.gene51085.t1 MTR_4g054860 62.069 58 21 1 86 142 132 189 2.43e-15 76.3
MS.gene51085.t1 MTR_6g465510 60.345 58 23 0 85 142 33 90 2.77e-15 74.7
MS.gene51085.t1 MTR_6g465430 40.164 122 61 3 63 178 37 152 3.19e-15 75.5
MS.gene51085.t1 MTR_6g465530 60.345 58 23 0 85 142 33 90 3.70e-15 73.9
MS.gene51085.t1 MTR_5g085070 46.154 78 42 0 64 141 30 107 4.09e-15 75.9
MS.gene51085.t1 MTR_2g438180 59.677 62 24 1 82 142 11 72 4.64e-15 72.0
MS.gene51085.t1 MTR_4g082345 36.066 122 59 2 19 140 1 103 4.75e-15 75.9
MS.gene51085.t1 MTR_2g085015 58.333 60 23 2 85 142 47 106 5.53e-15 74.3
MS.gene51085.t1 MTR_6g465690 58.621 58 24 0 85 142 63 120 5.89e-15 74.7
MS.gene51085.t1 MTR_3g105510 51.613 62 30 0 81 142 33 94 6.61e-15 74.3
MS.gene51085.t1 MTR_1g069985 48.718 78 34 2 69 140 54 131 6.91e-15 73.6
MS.gene51085.t1 MTR_1g006660 60.606 66 26 0 80 145 42 107 7.79e-15 74.3
MS.gene51085.t1 MTR_6g465450 47.500 80 37 1 63 142 37 111 8.76e-15 73.9
MS.gene51085.t1 MTR_4g035430 43.750 80 38 1 63 142 17 89 8.85e-15 73.6
MS.gene51085.t1 MTR_1g070015 61.404 57 21 1 85 140 84 140 1.17e-14 73.2
MS.gene51085.t1 MTR_1g070000 56.452 62 26 1 80 140 79 140 1.30e-14 73.2
MS.gene51085.t1 MTR_6g465420 48.780 82 36 1 85 160 54 135 1.38e-14 73.9
MS.gene51085.t1 MTR_6g466000 58.621 58 24 0 85 142 57 114 1.44e-14 73.2
MS.gene51085.t1 MTR_2g016730 44.828 87 33 1 54 140 7 78 1.70e-14 74.7
MS.gene51085.t1 MTR_1g070045 52.632 76 27 2 74 140 47 122 1.79e-14 71.6
MS.gene51085.t1 MTR_6g466020 41.414 99 48 1 58 156 26 114 1.96e-14 71.6
MS.gene51085.t1 MTR_2g043050 51.724 58 28 0 85 142 19 76 2.17e-14 72.4
MS.gene51085.t1 MTR_3g017420 52.000 50 24 0 93 142 3 52 2.30e-14 68.2
MS.gene51085.t1 MTR_8g032610 57.895 57 24 0 84 140 26 82 2.62e-14 73.6
MS.gene51085.t1 MTR_2g043030 51.724 58 28 0 85 142 19 76 3.02e-14 71.6
MS.gene51085.t1 MTR_5g008470 45.000 80 39 1 71 145 56 135 3.95e-14 70.9
MS.gene51085.t1 MTR_1g074250 59.016 61 23 1 84 142 18 78 4.51e-14 69.3
MS.gene51085.t1 MTR_5g008590 37.500 128 57 2 85 189 11 138 4.85e-14 70.5
MS.gene51085.t1 MTR_7g028925 51.515 66 28 2 78 142 21 83 4.92e-14 67.8
MS.gene51085.t1 MTR_6g029180 44.048 84 45 1 57 140 7 88 5.08e-14 72.8
MS.gene51085.t1 MTR_1g012470 62.712 59 22 0 83 141 5 63 6.72e-14 70.5
MS.gene51085.t1 MTR_5g008540 45.455 77 40 1 78 152 17 93 8.69e-14 67.4
MS.gene51085.t1 MTR_8g085960 54.386 57 26 0 84 140 24 80 1.09e-13 70.9
MS.gene51085.t1 MTR_6g012970 50.769 65 32 0 76 140 29 93 2.43e-13 71.6
MS.gene51085.t1 MTR_4g102670 56.897 58 24 1 85 142 15 71 4.29e-13 67.4
MS.gene51085.t1 MTR_2g043040 50.000 58 29 0 85 142 19 76 4.59e-13 68.9
MS.gene51085.t1 MTR_3g095190 61.290 62 24 0 81 142 166 227 4.81e-13 70.5
MS.gene51085.t1 MTR_3g098580 63.793 58 21 0 85 142 76 133 8.40e-13 68.6
MS.gene51085.t1 MTR_5g058470 45.238 84 45 1 59 141 70 153 9.93e-13 68.9
MS.gene51085.t1 MTR_8g023680 54.386 57 17 1 84 140 115 162 1.08e-12 69.3
MS.gene51085.t1 MTR_3g107380 63.793 58 21 0 84 141 7 64 1.09e-12 67.4
MS.gene51085.t1 MTR_7g011630 51.613 62 30 0 79 140 36 97 1.43e-12 69.3
MS.gene51085.t1 MTR_2g043020 48.276 58 30 0 85 142 19 76 1.53e-12 66.6
MS.gene51085.t1 MTR_3g062440 48.235 85 41 3 68 150 99 182 2.74e-12 67.0
MS.gene51085.t1 MTR_1g040430 45.783 83 38 2 93 168 119 201 3.19e-12 65.9
MS.gene51085.t1 MTR_3g105480 51.786 56 27 0 87 142 33 88 3.45e-12 66.2
MS.gene51085.t1 MTR_1g069960 61.667 60 22 1 84 142 26 85 6.01e-12 63.5
MS.gene51085.t1 MTR_1g097190 54.386 57 25 1 85 140 23 79 6.40e-12 63.2
MS.gene51085.t1 MTR_1g043350 43.636 110 55 3 47 155 46 149 9.68e-12 64.7
MS.gene51085.t1 MTR_8g023700 44.286 70 30 1 85 154 117 177 1.44e-11 65.9
MS.gene51085.t1 MTR_1g074370 56.757 74 25 2 82 148 70 143 2.06e-11 63.5
MS.gene51085.t1 MTR_5g009410 63.934 61 22 0 85 145 117 177 2.38e-11 65.1
MS.gene51085.t1 MTR_5g008550 57.627 59 25 0 85 143 21 79 2.61e-11 62.8
MS.gene51085.t1 MTR_3g072610 50.000 76 31 2 73 141 8 83 3.01e-11 63.2
MS.gene51085.t1 MTR_6g033255 64.407 59 21 0 85 143 20 78 3.63e-11 62.8
MS.gene51085.t1 MTR_5g010930 51.562 64 25 1 85 142 49 112 5.72e-11 62.4
MS.gene51085.t1 MTR_1g105400 37.000 100 42 2 83 182 113 191 7.29e-11 63.9
MS.gene51085.t1 MTR_5g010940 43.182 88 40 3 62 142 33 117 7.40e-11 62.4
MS.gene51085.t1 MTR_1g069945 40.164 122 67 3 85 204 101 218 8.85e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51085.t1 AT2G40340 37.968 374 148 11 19 385 6 302 2.38e-61 202
MS.gene51085.t1 AT2G40340 38.978 372 143 12 21 385 15 309 3.73e-61 202
MS.gene51085.t1 AT2G40340 53.977 176 58 4 19 190 6 162 1.45e-52 178
MS.gene51085.t1 AT5G05410 56.522 184 49 3 5 188 3 155 2.01e-46 162
MS.gene51085.t1 AT5G05410 56.522 184 49 3 5 188 3 155 2.22e-46 162
MS.gene51085.t1 AT2G40350 63.780 127 38 3 19 141 8 130 6.64e-46 156
MS.gene51085.t1 AT2G40350 63.780 127 38 3 19 141 1 123 8.45e-46 155
MS.gene51085.t1 AT2G40340 35.016 317 130 7 72 385 1 244 5.92e-44 155
MS.gene51085.t1 AT2G40340 35.016 317 130 7 72 385 1 244 5.92e-44 155
MS.gene51085.t1 AT2G40340 35.016 317 130 7 72 385 1 244 5.92e-44 155
MS.gene51085.t1 AT3G11020 55.747 174 47 3 18 189 10 155 1.53e-39 144
MS.gene51085.t1 AT1G75490 57.658 111 42 1 59 169 16 121 2.48e-37 135
MS.gene51085.t1 AT5G18450 67.470 83 27 0 58 140 7 89 5.44e-33 126
MS.gene51085.t1 AT2G38340 59.483 116 30 3 35 142 29 135 5.44e-30 116
MS.gene51085.t1 AT3G57600 61.176 85 33 0 59 143 2 86 1.39e-28 113
MS.gene51085.t1 AT5G65130 60.714 84 32 1 85 167 111 194 6.65e-25 103
MS.gene51085.t1 AT5G65130 60.714 84 32 1 85 167 113 196 7.12e-25 103
MS.gene51085.t1 AT3G16770 58.824 68 28 0 76 143 70 137 1.15e-22 96.7
MS.gene51085.t1 AT4G06746 61.905 63 24 0 80 142 31 93 2.66e-22 92.8
MS.gene51085.t1 AT1G78080 46.087 115 54 1 74 180 141 255 2.94e-22 97.4
MS.gene51085.t1 AT2G47520 41.129 124 62 2 75 198 40 152 3.00e-22 93.6
MS.gene51085.t1 AT1G22190 62.338 77 28 1 68 143 65 141 7.12e-22 94.7
MS.gene51085.t1 AT1G46768 50.549 91 41 1 85 175 31 117 1.21e-21 91.3
MS.gene51085.t1 AT1G46768 50.549 91 41 1 85 175 31 117 1.21e-21 91.3
MS.gene51085.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.25e-21 90.9
MS.gene51085.t1 AT2G22200 65.079 63 22 0 81 143 67 129 1.34e-21 94.0
MS.gene51085.t1 AT2G33710 65.574 61 21 0 82 142 67 127 1.48e-21 92.8
MS.gene51085.t1 AT2G33710 65.574 61 21 0 82 142 67 127 1.78e-21 92.8
MS.gene51085.t1 AT1G36060 60.494 81 28 1 67 143 121 201 2.78e-21 94.4
MS.gene51085.t1 AT5G67190 47.826 92 44 1 77 168 13 100 3.04e-21 90.9
MS.gene51085.t1 AT5G13330 62.500 64 24 0 79 142 33 96 5.69e-21 90.9
MS.gene51085.t1 AT4G39780 69.492 59 18 0 85 143 93 151 7.36e-21 92.0
MS.gene51085.t1 AT4G11140 66.102 59 20 0 83 141 85 143 7.49e-21 92.4
MS.gene51085.t1 AT5G25190 63.333 60 22 0 82 141 5 64 2.15e-20 88.6
MS.gene51085.t1 AT2G20880 62.121 66 25 0 78 143 180 245 2.77e-20 91.7
MS.gene51085.t1 AT4G36900 62.712 59 22 0 85 143 30 88 2.81e-20 88.6
MS.gene51085.t1 AT4G32800 60.000 65 26 0 80 144 14 78 3.84e-20 89.0
MS.gene51085.t1 AT2G25820 61.290 62 24 0 85 146 26 87 4.12e-20 89.0
MS.gene51085.t1 AT2G35700 38.194 144 77 3 85 216 45 188 4.15e-20 88.2
MS.gene51085.t1 AT2G23340 62.712 59 22 0 85 143 28 86 4.80e-20 87.4
MS.gene51085.t1 AT4G13620 66.102 59 20 0 85 143 232 290 5.64e-20 91.7
MS.gene51085.t1 AT1G71450 37.791 172 86 5 67 231 10 167 7.54e-20 87.0
MS.gene51085.t1 AT5G61890 65.517 58 20 0 85 142 90 147 1.20e-19 88.2
MS.gene51085.t1 AT1G72360 52.941 68 32 0 77 144 17 84 1.21e-19 87.4
MS.gene51085.t1 AT4G16750 49.398 83 42 0 62 144 17 99 1.36e-19 86.3
MS.gene51085.t1 AT3G50260 58.065 62 26 0 82 143 18 79 1.45e-19 85.5
MS.gene51085.t1 AT4G28140 45.283 106 50 1 85 190 143 240 1.53e-19 89.0
MS.gene51085.t1 AT1G72360 52.941 68 32 0 77 144 66 133 1.73e-19 87.8
MS.gene51085.t1 AT1G72360 52.941 68 32 0 77 144 68 135 1.88e-19 87.8
MS.gene51085.t1 AT5G51990 51.546 97 40 2 85 175 54 149 2.79e-19 86.7
MS.gene51085.t1 AT5G11590 49.412 85 41 1 61 145 29 111 3.02e-19 86.7
MS.gene51085.t1 AT4G27950 61.667 60 23 0 81 140 114 173 4.36e-19 88.2
MS.gene51085.t1 AT4G25470 53.659 82 32 1 85 160 51 132 4.49e-19 85.9
MS.gene51085.t1 AT1G03800 42.105 114 60 1 39 146 1 114 4.64e-19 86.3
MS.gene51085.t1 AT3G15210 43.878 98 52 1 82 176 22 119 4.69e-19 85.9
MS.gene51085.t1 AT3G60490 63.333 60 22 0 85 144 71 130 5.64e-19 86.3
MS.gene51085.t1 AT1G15360 65.517 58 20 0 84 141 6 63 7.91e-19 84.7
MS.gene51085.t1 AT1G15360 65.517 58 20 0 84 141 6 63 7.91e-19 84.7
MS.gene51085.t1 AT5G25810 61.667 60 23 0 85 144 36 95 9.85e-19 84.7
MS.gene51085.t1 AT2G44940 61.667 60 23 0 85 144 100 159 1.30e-18 86.3
MS.gene51085.t1 AT3G16280 60.000 60 24 0 85 144 61 120 1.92e-18 84.3
MS.gene51085.t1 AT3G16280 60.000 60 24 0 85 144 79 138 2.42e-18 84.7
MS.gene51085.t1 AT2G40220 67.647 68 22 0 73 140 43 110 2.51e-18 85.9
MS.gene51085.t1 AT4G23750 62.712 59 22 0 82 140 119 177 2.72e-18 85.9
MS.gene51085.t1 AT4G23750 62.712 59 22 0 82 140 119 177 2.72e-18 85.9
MS.gene51085.t1 AT2G44840 46.067 89 45 2 58 143 63 151 3.57e-18 83.6
MS.gene51085.t1 AT5G21960 61.017 59 23 0 84 142 6 64 4.65e-18 82.8
MS.gene51085.t1 AT1G22985 51.163 86 36 3 81 161 71 155 5.03e-18 81.3
MS.gene51085.t1 AT5G25390 63.333 60 22 0 84 143 6 65 5.45e-18 82.0
MS.gene51085.t1 AT3G20310 57.143 70 29 1 82 150 24 93 5.97e-18 83.2
MS.gene51085.t1 AT5G47220 67.241 58 18 1 85 141 117 174 6.53e-18 83.2
MS.gene51085.t1 AT4G25490 65.517 58 20 0 85 142 48 105 6.53e-18 82.4
MS.gene51085.t1 AT1G21910 50.704 71 35 0 85 155 50 120 6.64e-18 82.8
MS.gene51085.t1 AT5G53290 63.158 57 21 0 84 140 124 180 6.89e-18 85.1
MS.gene51085.t1 AT1G22810 41.176 102 58 1 81 180 10 111 8.13e-18 80.1
MS.gene51085.t1 AT3G61630 63.793 58 21 0 83 140 103 160 8.21e-18 84.3
MS.gene51085.t1 AT1G71130 62.121 66 20 1 80 140 74 139 8.47e-18 80.9
MS.gene51085.t1 AT3G23240 63.492 63 22 1 79 140 76 138 1.03e-17 82.0
MS.gene51085.t1 AT5G47230 65.672 67 20 2 78 141 147 213 1.44e-17 83.2
MS.gene51085.t1 AT4G25480 63.793 58 21 0 85 142 51 108 1.80e-17 81.3
MS.gene51085.t1 AT4G17500 67.241 58 18 1 85 141 148 205 2.73e-17 82.0
MS.gene51085.t1 AT3G23230 56.000 75 27 2 84 152 19 93 3.11e-17 78.6
MS.gene51085.t1 AT5G43410 57.143 70 29 1 73 141 3 72 3.28e-17 78.2
MS.gene51085.t1 AT1G50640 58.333 60 25 0 82 141 25 84 3.43e-17 80.5
MS.gene51085.t1 AT5G51190 59.375 64 25 1 79 141 66 129 3.61e-17 80.5
MS.gene51085.t1 AT2G46310 43.519 108 59 1 33 140 49 154 4.13e-17 81.6
MS.gene51085.t1 AT1G28360 60.000 60 24 0 82 141 9 68 6.66e-17 79.0
MS.gene51085.t1 AT5G44210 47.619 84 38 1 64 141 6 89 8.13e-17 79.0
MS.gene51085.t1 AT1G01250 50.633 79 32 2 69 142 26 102 8.46e-17 78.6
MS.gene51085.t1 AT1G24590 64.912 57 20 0 84 140 57 113 1.15e-16 80.5
MS.gene51085.t1 AT1G28160 62.712 59 22 0 82 140 36 94 1.56e-16 79.3
MS.gene51085.t1 AT1G19210 48.529 68 35 0 75 142 2 69 1.80e-16 77.8
MS.gene51085.t1 AT5G13910 61.404 57 22 0 84 140 19 75 1.86e-16 78.2
MS.gene51085.t1 AT1G12980 56.923 65 28 0 76 140 48 112 2.69e-16 79.7
MS.gene51085.t1 AT5G18560 52.113 71 34 0 70 140 40 110 2.75e-16 80.1
MS.gene51085.t1 AT2G36450 61.017 59 22 1 85 142 15 73 3.81e-16 76.6
MS.gene51085.t1 AT2G31230 55.263 76 29 2 80 154 81 152 4.11e-16 77.8
MS.gene51085.t1 AT5G25390 61.667 60 20 1 84 143 6 62 7.12e-16 75.9
MS.gene51085.t1 AT1G12890 54.412 68 31 0 73 140 9 76 8.94e-16 76.6
MS.gene51085.t1 AT1G77200 62.903 62 23 0 85 146 43 104 9.51e-16 77.0
MS.gene51085.t1 AT1G71520 43.421 76 39 1 72 143 1 76 1.09e-15 74.3
MS.gene51085.t1 AT5G61600 62.069 58 21 1 85 141 88 145 4.22e-15 75.1
MS.gene51085.t1 AT1G28370 56.897 58 25 0 84 141 19 76 4.68e-15 73.2
MS.gene51085.t1 AT1G28370 56.897 58 25 0 84 141 57 114 5.33e-15 73.9
MS.gene51085.t1 AT4G17490 63.793 58 20 1 85 141 137 194 5.49e-15 75.5
MS.gene51085.t1 AT1G74930 44.737 76 40 1 69 142 3 78 7.76e-15 73.2
MS.gene51085.t1 AT5G07580 60.345 58 22 1 85 141 110 167 1.04e-14 73.2
MS.gene51085.t1 AT1G77640 54.545 66 30 0 79 144 37 102 2.13e-14 73.2
MS.gene51085.t1 AT4G34410 63.492 63 22 1 85 147 136 197 2.35e-14 73.2
MS.gene51085.t1 AT4G31060 48.529 68 34 1 75 141 16 83 2.39e-14 71.6
MS.gene51085.t1 AT1G43160 55.263 76 31 1 84 156 60 135 2.56e-14 71.6
MS.gene51085.t1 AT1G53910 36.620 142 85 3 75 212 113 253 2.71e-14 74.3
MS.gene51085.t1 AT1G53910 35.928 167 95 5 57 212 90 255 2.72e-14 74.3
MS.gene51085.t1 AT1G53910 35.928 167 95 5 57 212 90 255 2.72e-14 74.3
MS.gene51085.t1 AT3G14230 54.545 77 35 0 75 151 113 189 3.27e-14 73.9
MS.gene51085.t1 AT3G14230 54.545 77 35 0 75 151 114 190 3.35e-14 73.9
MS.gene51085.t1 AT3G14230 54.545 77 35 0 75 151 118 194 3.97e-14 73.9
MS.gene51085.t1 AT5G07310 65.517 58 20 0 85 142 92 149 7.85e-14 71.6
MS.gene51085.t1 AT4G18450 61.017 59 21 2 84 140 109 167 1.56e-13 71.2
MS.gene51085.t1 AT5G50080 62.295 61 23 0 82 142 83 143 1.92e-13 70.1
MS.gene51085.t1 AT5G50080 62.295 61 23 0 82 142 74 134 2.09e-13 69.7
MS.gene51085.t1 AT1G68550 32.857 140 76 3 70 201 98 227 2.57e-13 70.9
MS.gene51085.t1 AT1G68550 32.857 140 76 3 70 201 98 227 2.57e-13 70.9
MS.gene51085.t1 AT5G11190 60.000 60 24 0 84 143 6 65 7.14e-13 67.4
MS.gene51085.t1 AT1G12610 55.172 58 26 0 85 142 30 87 1.55e-12 67.0
MS.gene51085.t1 AT1G64380 45.536 112 50 2 85 186 136 246 2.64e-12 68.2
MS.gene51085.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.85e-12 65.5
MS.gene51085.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.85e-12 65.5
MS.gene51085.t1 AT1G44830 58.065 62 25 1 84 144 34 95 5.05e-12 65.5
MS.gene51085.t1 AT1G33760 55.738 61 27 0 85 145 20 80 5.35e-12 64.7
MS.gene51085.t1 AT5G64750 56.863 51 22 0 92 142 192 242 8.86e-12 66.6
MS.gene51085.t1 AT3G23220 62.903 62 22 1 81 141 10 71 1.55e-11 62.4
MS.gene51085.t1 AT1G04370 60.656 61 23 1 82 141 17 77 2.45e-11 61.6

Find 96 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAGGTGGATGAGCTTT+TGG 0.152065 5.1:-65663972 MS.gene51085:CDS
GGGAGAAGATACACCGTTTC+TGG 0.163018 5.1:-65663729 MS.gene51085:CDS
CAAAGTCTACTTCCTCTATT+TGG 0.187638 5.1:+65664595 None:intergenic
AGATACACCGTTTCTGGATT+TGG 0.236598 5.1:-65663723 MS.gene51085:CDS
GGAAATGGGTTGCTGAAATT+AGG 0.238482 5.1:-65664621 MS.gene51085:CDS
GTGATGCAAAGTTTGGATTT+TGG 0.248812 5.1:-65663914 MS.gene51085:CDS
AATAATCCGATTGATGATTC+TGG 0.273054 5.1:-65663938 MS.gene51085:CDS
ATCGGATTATAGTTGTATTC+AGG 0.285106 5.1:-65664473 MS.gene51085:CDS
ACTGTTGATGTTTGTTATAA+AGG 0.292146 5.1:-65664295 MS.gene51085:CDS
ACTTAACTTTCCTGATATAT+CGG 0.317233 5.1:-65664491 MS.gene51085:CDS
ACAGCATCAGGTGTCGATTA+TGG 0.318832 5.1:-65663776 MS.gene51085:CDS
ACCTGAGGATTACTTTCTTC+AGG 0.328346 5.1:+65663878 None:intergenic
GTTGGGGAGTTTGCCTCATA+TGG 0.328738 5.1:-65663804 MS.gene51085:CDS
TAGCTGAGACTCTAACAAAA+TGG 0.354577 5.1:-65664798 MS.gene51085:CDS
TTCTGGGGTGATGCAAAGTT+TGG 0.360342 5.1:-65663921 MS.gene51085:CDS
CAACTATAATCCGATATATC+AGG 0.375560 5.1:+65664481 None:intergenic
TTGTGCTATTGAGGATGTTA+AGG 0.380422 5.1:-65664350 MS.gene51085:CDS
GAAATGGGTTGCTGAAATTA+GGG 0.399012 5.1:-65664620 MS.gene51085:CDS
TTCCTTCTGAATTTACATCT+TGG 0.401082 5.1:+65664185 None:intergenic
TTAGCCGGTGCTTTACGCTT+TGG 0.401156 5.1:+65664730 None:intergenic
AATCCAGATGCTAAGCTGTT+GGG 0.408233 5.1:-65663821 MS.gene51085:CDS
TCTTGCTTCATTCTACTAGT+TGG 0.417780 5.1:+65664256 None:intergenic
AGCTGCTAGCTGTTGTTCTT+CGG 0.428526 5.1:-65664425 MS.gene51085:CDS
GAGGTGTTAGACAGAGGACT+TGG 0.449143 5.1:-65664645 MS.gene51085:CDS
CTCCCCAACAGCTTAGCATC+TGG 0.449594 5.1:+65663818 None:intergenic
ATAATCCGATTGATGATTCT+GGG 0.453289 5.1:-65663937 MS.gene51085:CDS
TTCTGAGGTTTGTGCTATTG+AGG 0.453311 5.1:-65664359 MS.gene51085:CDS
ACAGTGTTGTTCATATGAAC+AGG 0.454495 5.1:+65664313 None:intergenic
TAATGCTTCTCTTGCGCCGT+TGG 0.459289 5.1:-65664872 MS.gene51085:CDS
TCACGTGGATGATTTCTTTG+AGG 0.459400 5.1:-65663987 MS.gene51085:CDS
AAAACTAGGAGTAGAGGAAA+AGG 0.467058 5.1:-65664832 MS.gene51085:CDS
ACCTGAAGAAAGTAATCCTC+AGG 0.469002 5.1:-65663879 MS.gene51085:CDS
GGATTACCTCTGAACTTCAA+TGG 0.471375 5.1:-65663755 MS.gene51085:CDS
CAAATAGAGGAAGTAGACTT+TGG 0.472515 5.1:-65664594 MS.gene51085:CDS
GTTTGAGTTCCCGATGTTTG+TGG 0.475222 5.1:+65664145 None:intergenic
CATATGGAACACACAGCATC+AGG 0.479072 5.1:-65663788 MS.gene51085:CDS
TACCTCTGAACTTCAATGGC+GGG 0.490863 5.1:-65663751 MS.gene51085:CDS
AAGCGTAAAGCACCGGCTAA+AGG 0.491219 5.1:-65664727 MS.gene51085:CDS
AAGAGGAAAACTAGGAGTAG+AGG 0.491742 5.1:-65664838 MS.gene51085:CDS
CCAAGGTCTATGATATCATC+AGG 0.500265 5.1:+65664220 None:intergenic
AGAGGAAGTAGACTTTGGTT+AGG 0.502051 5.1:-65664589 MS.gene51085:CDS
AAAGGGTGTATGAAAGGTAA+AGG 0.503890 5.1:-65664697 MS.gene51085:CDS
CCGGCTAAAGGTTCGAAGAA+AGG 0.504270 5.1:-65664715 MS.gene51085:CDS
CGTGGATGATTTCTTTGAGG+TGG 0.506641 5.1:-65663984 MS.gene51085:CDS
CGGCTAAAGGTTCGAAGAAA+GGG 0.508494 5.1:-65664714 MS.gene51085:CDS
TAATCCAGATGCTAAGCTGT+TGG 0.515884 5.1:-65663822 MS.gene51085:CDS
TTCATATGAACAGGTATCCT+AGG 0.516921 5.1:+65664322 None:intergenic
CTTTATGCTGGTAAAGATGA+TGG 0.517668 5.1:-65664757 MS.gene51085:CDS
AAGAAAGTAATCCTCAGGTT+GGG 0.524183 5.1:-65663874 MS.gene51085:CDS
ATATCATCAGGCTCATCCAT+TGG 0.528488 5.1:+65664232 None:intergenic
GAAATTAGGGAACCAAATAG+AGG 0.528600 5.1:-65664607 MS.gene51085:CDS
GATGCTGTGTGTTCCATATG+AGG 0.531382 5.1:+65663791 None:intergenic
ACCTCTGAACTTCAATGGCG+GGG 0.532633 5.1:-65663750 MS.gene51085:CDS
AGCACAGAATCGTGTGTTTG+TGG 0.534037 5.1:+65664112 None:intergenic
TACAATGAGAAGCTTTATGC+TGG 0.534260 5.1:-65664769 MS.gene51085:CDS
CCTTTCTTCGAACCTTTAGC+CGG 0.540256 5.1:+65664715 None:intergenic
TTAAAACATTGATCATAAGC+AGG 0.541137 5.1:+65664892 None:intergenic
CACGATTCAAGAGGAATGCA+AGG 0.542286 5.1:-65663686 MS.gene51085:CDS
TCGCGCAGAAGGACCATACA+TGG 0.549570 5.1:+65664513 None:intergenic
ATCACCCCAGAATCATCAAT+CGG 0.549835 5.1:+65663932 None:intergenic
AGGTGTTAGACAGAGGACTT+GGG 0.550286 5.1:-65664644 MS.gene51085:CDS
TAGAATGAAGCAAGAGCCAA+TGG 0.552297 5.1:-65664248 MS.gene51085:CDS
CTAACACAACCACAAACATC+GGG 0.552366 5.1:-65664154 MS.gene51085:CDS
TCATAATCCAAATCCAGAAA+CGG 0.553925 5.1:+65663716 None:intergenic
GAAGAAAGTAATCCTCAGGT+TGG 0.554576 5.1:-65663875 MS.gene51085:CDS
ATCCAGATGCTAAGCTGTTG+GGG 0.555129 5.1:-65663820 MS.gene51085:CDS
ACAAACACACGATTCTGTGC+TGG 0.560622 5.1:-65664110 MS.gene51085:CDS
ATTCAAGAGGAATGCAAGGA+AGG 0.562142 5.1:-65663682 MS.gene51085:CDS
CGATTCTGTGCTGGTTGGAG+AGG 0.565617 5.1:-65664101 MS.gene51085:CDS
ATCCAAGATGTAAATTCAGA+AGG 0.567305 5.1:-65664187 MS.gene51085:CDS
TCTAACACAACCACAAACAT+CGG 0.567821 5.1:-65664155 MS.gene51085:CDS
TCGAAGAAAGGGTGTATGAA+AGG 0.574846 5.1:-65664703 MS.gene51085:CDS
GGAAAGTTAAGTCGCGCAGA+AGG 0.575063 5.1:+65664502 None:intergenic
TGAGACTCTAACAAAATGGA+AGG 0.576045 5.1:-65664794 MS.gene51085:CDS
AACTGTGTCTAGTCATTCTG+AGG 0.586532 5.1:-65664374 MS.gene51085:CDS
GATCTAAATCACGATTCAAG+AGG 0.592296 5.1:-65663695 MS.gene51085:CDS
TATGCTGCTAGAGCCATGTA+TGG 0.603738 5.1:-65664526 MS.gene51085:CDS
TAAACCAAAGCGTAAAGCAC+CGG 0.609257 5.1:-65664734 MS.gene51085:CDS
TAAAGGAGGACCTCAAAACT+CGG 0.611825 5.1:-65664680 MS.gene51085:CDS
CCTCTGAACTTCAATGGCGG+GGG 0.616934 5.1:-65663749 MS.gene51085:CDS
ACACACGATTCTGTGCTGGT+TGG 0.622925 5.1:-65664106 MS.gene51085:CDS
GGGTGTGTGTAATGACCAGA+TGG 0.627240 5.1:-65664080 MS.gene51085:CDS
GATTCTGTGCTGGTTGGAGA+GGG 0.638245 5.1:-65664100 MS.gene51085:CDS
AGGATGTTAAGGAGATACCT+AGG 0.639022 5.1:-65664339 MS.gene51085:CDS
GGTGTTAGACAGAGGACTTG+GGG 0.639869 5.1:-65664643 MS.gene51085:CDS
GATGATATCATAGACCTTGG+TGG 0.641479 5.1:-65664217 MS.gene51085:CDS
CCTGATGATATCATAGACCT+TGG 0.647685 5.1:-65664220 MS.gene51085:CDS
TTACCTCTGAACTTCAATGG+CGG 0.652917 5.1:-65663752 MS.gene51085:CDS
AACTCGGAGAATAAGTATCG+AGG 0.657332 5.1:-65664664 MS.gene51085:CDS
TAATCCGATTGATGATTCTG+GGG 0.667524 5.1:-65663936 MS.gene51085:CDS
GGGTGTATGAAAGGTAAAGG+AGG 0.671358 5.1:-65664694 MS.gene51085:CDS
CTTGGATTTCACCACCACCA+AGG 0.674758 5.1:+65664203 None:intergenic
GATATCATAGACCTTGGTGG+TGG 0.689732 5.1:-65664214 MS.gene51085:CDS
GTGTTAGACAGAGGACTTGG+GGG 0.694177 5.1:-65664642 MS.gene51085:CDS
CTTGAAGTAGTCCCAACCTG+AGG 0.697977 5.1:+65663863 None:intergenic
AGTATCGAGGTGTTAGACAG+AGG 0.700935 5.1:-65664651 MS.gene51085:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTTAACTTTCCTGATATAT+CGG - chr5.1:65664080-65664099 MS.gene51085:CDS 25.0%
! TTAAAACATTGATCATAAGC+AGG + chr5.1:65663682-65663701 None:intergenic 25.0%
!! TTCAAGCTTCTTTTATGAAT+TGG - chr5.1:65664725-65664744 MS.gene51085:CDS 25.0%
!!! ACTGTTGATGTTTGTTATAA+AGG - chr5.1:65664276-65664295 MS.gene51085:CDS 25.0%
!!! TTATTTGAAGAGTTTTTCAG+TGG - chr5.1:65664551-65664570 MS.gene51085:CDS 25.0%
ATCCAAGATGTAAATTCAGA+AGG - chr5.1:65664384-65664403 MS.gene51085:CDS 30.0%
ATCGGATTATAGTTGTATTC+AGG - chr5.1:65664098-65664117 MS.gene51085:CDS 30.0%
CAACTATAATCCGATATATC+AGG + chr5.1:65664093-65664112 None:intergenic 30.0%
TATCGAAAAAGAGGAAAACT+AGG - chr5.1:65663725-65663744 MS.gene51085:CDS 30.0%
TCATAATCCAAATCCAGAAA+CGG + chr5.1:65664858-65664877 None:intergenic 30.0%
TTCCTTCTGAATTTACATCT+TGG + chr5.1:65664389-65664408 None:intergenic 30.0%
! AATAATCCGATTGATGATTC+TGG - chr5.1:65664633-65664652 MS.gene51085:CDS 30.0%
! ATAATCCGATTGATGATTCT+GGG - chr5.1:65664634-65664653 MS.gene51085:CDS 30.0%
!!! CTCTTTTTCGATAATTCCAA+CGG + chr5.1:65663718-65663737 None:intergenic 30.0%
AAAACTAGGAGTAGAGGAAA+AGG - chr5.1:65663739-65663758 MS.gene51085:CDS 35.0%
AAGAAAGTAATCCTCAGGTT+GGG - chr5.1:65664697-65664716 MS.gene51085:CDS 35.0%
CAAAGTCTACTTCCTCTATT+TGG + chr5.1:65663979-65663998 None:intergenic 35.0%
CAAATAGAGGAAGTAGACTT+TGG - chr5.1:65663977-65663996 MS.gene51085:CDS 35.0%
CGTTGGAATTATCGAAAAAG+AGG - chr5.1:65663716-65663735 MS.gene51085:CDS 35.0%
CTTTATGCTGGTAAAGATGA+TGG - chr5.1:65663814-65663833 MS.gene51085:CDS 35.0%
GAAATTAGGGAACCAAATAG+AGG - chr5.1:65663964-65663983 MS.gene51085:CDS 35.0%
GATCTAAATCACGATTCAAG+AGG - chr5.1:65664876-65664895 MS.gene51085:CDS 35.0%
TAGCTGAGACTCTAACAAAA+TGG - chr5.1:65663773-65663792 MS.gene51085:CDS 35.0%
TCTAACACAACCACAAACAT+CGG - chr5.1:65664416-65664435 MS.gene51085:CDS 35.0%
TCTTGCTTCATTCTACTAGT+TGG + chr5.1:65664318-65664337 None:intergenic 35.0%
TGAGACTCTAACAAAATGGA+AGG - chr5.1:65663777-65663796 MS.gene51085:CDS 35.0%
TTCATATGAACAGGTATCCT+AGG + chr5.1:65664252-65664271 None:intergenic 35.0%
! AAAGGGTGTATGAAAGGTAA+AGG - chr5.1:65663874-65663893 MS.gene51085:CDS 35.0%
! AAGTTTGGATTTTGGACAAG+TGG - chr5.1:65664665-65664684 MS.gene51085:CDS 35.0%
! ACAGTGTTGTTCATATGAAC+AGG + chr5.1:65664261-65664280 None:intergenic 35.0%
! AGTTTGGATTTTGGACAAGT+GGG - chr5.1:65664666-65664685 MS.gene51085:CDS 35.0%
! GACTTTGGTTAGGTACTTTT+CGG - chr5.1:65663992-65664011 MS.gene51085:CDS 35.0%
! GTGATGCAAAGTTTGGATTT+TGG - chr5.1:65664657-65664676 MS.gene51085:CDS 35.0%
! TAATCCGATTGATGATTCTG+GGG - chr5.1:65664635-65664654 MS.gene51085:CDS 35.0%
! TACAATGAGAAGCTTTATGC+TGG - chr5.1:65663802-65663821 MS.gene51085:CDS 35.0%
! TACTTATTCTCCGAGTTTTG+AGG + chr5.1:65663904-65663923 None:intergenic 35.0%
! TTGTGCTATTGAGGATGTTA+AGG - chr5.1:65664221-65664240 MS.gene51085:CDS 35.0%
!! ATGACCAGATGGATTTTTCA+TGG - chr5.1:65664502-65664521 MS.gene51085:CDS 35.0%
!! GAAATGGGTTGCTGAAATTA+GGG - chr5.1:65663951-65663970 MS.gene51085:CDS 35.0%
AACTGTGTCTAGTCATTCTG+AGG - chr5.1:65664197-65664216 MS.gene51085:CDS 40.0%
AAGAGGAAAACTAGGAGTAG+AGG - chr5.1:65663733-65663752 MS.gene51085:CDS 40.0%
AATCCAGATGCTAAGCTGTT+GGG - chr5.1:65664750-65664769 MS.gene51085:CDS 40.0%
ACCTGAAGAAAGTAATCCTC+AGG - chr5.1:65664692-65664711 MS.gene51085:CDS 40.0%
ACCTGAGGATTACTTTCTTC+AGG + chr5.1:65664696-65664715 None:intergenic 40.0%
AGAGGAAGTAGACTTTGGTT+AGG - chr5.1:65663982-65664001 MS.gene51085:CDS 40.0%
AGGATGTTAAGGAGATACCT+AGG - chr5.1:65664232-65664251 MS.gene51085:CDS 40.0%
ATATCATCAGGCTCATCCAT+TGG + chr5.1:65664342-65664361 None:intergenic 40.0%
ATCACCCCAGAATCATCAAT+CGG + chr5.1:65664642-65664661 None:intergenic 40.0%
ATTCAAGAGGAATGCAAGGA+AGG - chr5.1:65664889-65664908 MS.gene51085:CDS 40.0%
CCAAGGTCTATGATATCATC+AGG + chr5.1:65664354-65664373 None:intergenic 40.0%
CCATCCATGAAAAATCCATC+TGG + chr5.1:65664509-65664528 None:intergenic 40.0%
CCTGATGATATCATAGACCT+TGG - chr5.1:65664351-65664370 MS.gene51085:CDS 40.0%
CTAACACAACCACAAACATC+GGG - chr5.1:65664417-65664436 MS.gene51085:CDS 40.0%
GAAGAAAGTAATCCTCAGGT+TGG - chr5.1:65664696-65664715 MS.gene51085:CDS 40.0%
GATGATATCATAGACCTTGG+TGG - chr5.1:65664354-65664373 MS.gene51085:CDS 40.0%
GGATTACCTCTGAACTTCAA+TGG - chr5.1:65664816-65664835 MS.gene51085:CDS 40.0%
TAAACCAAAGCGTAAAGCAC+CGG - chr5.1:65663837-65663856 MS.gene51085:CDS 40.0%
TAAAGGAGGACCTCAAAACT+CGG - chr5.1:65663891-65663910 MS.gene51085:CDS 40.0%
TAATCCAGATGCTAAGCTGT+TGG - chr5.1:65664749-65664768 MS.gene51085:CDS 40.0%
TAGAATGAAGCAAGAGCCAA+TGG - chr5.1:65664323-65664342 MS.gene51085:CDS 40.0%
TCACGTGGATGATTTCTTTG+AGG - chr5.1:65664584-65664603 MS.gene51085:CDS 40.0%
TTACCTCTGAACTTCAATGG+CGG - chr5.1:65664819-65664838 MS.gene51085:CDS 40.0%
! AACTCGGAGAATAAGTATCG+AGG - chr5.1:65663907-65663926 MS.gene51085:CDS 40.0%
! AGATACACCGTTTCTGGATT+TGG - chr5.1:65664848-65664867 MS.gene51085:CDS 40.0%
! TCGAAGAAAGGGTGTATGAA+AGG - chr5.1:65663868-65663887 MS.gene51085:CDS 40.0%
!! CCAGATGGATTTTTCATGGA+TGG - chr5.1:65664506-65664525 MS.gene51085:CDS 40.0%
!! GGAAATGGGTTGCTGAAATT+AGG - chr5.1:65663950-65663969 MS.gene51085:CDS 40.0%
!! TTCTGAGGTTTGTGCTATTG+AGG - chr5.1:65664212-65664231 MS.gene51085:CDS 40.0%
!! TTTGAGGTGGATGAGCTTTT+GGG - chr5.1:65664600-65664619 MS.gene51085:CDS 40.0%
!!! AGTGGATGAGTTTTTTCACG+TGG - chr5.1:65664569-65664588 MS.gene51085:CDS 40.0%
ACAAACACACGATTCTGTGC+TGG - chr5.1:65664461-65664480 MS.gene51085:CDS 45.0%
AGCACAGAATCGTGTGTTTG+TGG + chr5.1:65664462-65664481 None:intergenic 45.0%
AGCTGCTAGCTGTTGTTCTT+CGG - chr5.1:65664146-65664165 MS.gene51085:CDS 45.0%
AGGTGTTAGACAGAGGACTT+GGG - chr5.1:65663927-65663946 MS.gene51085:CDS 45.0%
ATCCAGATGCTAAGCTGTTG+GGG - chr5.1:65664751-65664770 MS.gene51085:CDS 45.0%
CACGATTCAAGAGGAATGCA+AGG - chr5.1:65664885-65664904 MS.gene51085:CDS 45.0%
CATATGGAACACACAGCATC+AGG - chr5.1:65664783-65664802 MS.gene51085:CDS 45.0%
CCTTTCTTCGAACCTTTAGC+CGG + chr5.1:65663859-65663878 None:intergenic 45.0%
CGGCTAAAGGTTCGAAGAAA+GGG - chr5.1:65663857-65663876 MS.gene51085:CDS 45.0%
GATATCATAGACCTTGGTGG+TGG - chr5.1:65664357-65664376 MS.gene51085:CDS 45.0%
GATGCTGTGTGTTCCATATG+AGG + chr5.1:65664783-65664802 None:intergenic 45.0%
GGGTGTATGAAAGGTAAAGG+AGG - chr5.1:65663877-65663896 MS.gene51085:CDS 45.0%
TACCTCTGAACTTCAATGGC+GGG - chr5.1:65664820-65664839 MS.gene51085:CDS 45.0%
TATGCTGCTAGAGCCATGTA+TGG - chr5.1:65664045-65664064 MS.gene51085:CDS 45.0%
! AGTATCGAGGTGTTAGACAG+AGG - chr5.1:65663920-65663939 MS.gene51085:CDS 45.0%
! CGTGGATGATTTCTTTGAGG+TGG - chr5.1:65664587-65664606 MS.gene51085:CDS 45.0%
! GTTTGAGTTCCCGATGTTTG+TGG + chr5.1:65664429-65664448 None:intergenic 45.0%
! TTGAGGTGGATGAGCTTTTG+GGG - chr5.1:65664601-65664620 MS.gene51085:CDS 45.0%
!! ACAGCATCAGGTGTCGATTA+TGG - chr5.1:65664795-65664814 MS.gene51085:CDS 45.0%
!! TTCTGGGGTGATGCAAAGTT+TGG - chr5.1:65664650-65664669 MS.gene51085:CDS 45.0%
!!! CTTTGAGGTGGATGAGCTTT+TGG - chr5.1:65664599-65664618 MS.gene51085:CDS 45.0%
ACAGAGGACTTGGGGGAAAT+GGG - chr5.1:65663936-65663955 MS.gene51085:CDS 50.0%
ACCTCTGAACTTCAATGGCG+GGG - chr5.1:65664821-65664840 MS.gene51085:CDS 50.0%
CCGGCTAAAGGTTCGAAGAA+AGG - chr5.1:65663856-65663875 MS.gene51085:CDS 50.0%
CTTGAAGTAGTCCCAACCTG+AGG + chr5.1:65664711-65664730 None:intergenic 50.0%
CTTGGATTTCACCACCACCA+AGG + chr5.1:65664371-65664390 None:intergenic 50.0%
GGAAAGTTAAGTCGCGCAGA+AGG + chr5.1:65664072-65664091 None:intergenic 50.0%
GGGAGAAGATACACCGTTTC+TGG - chr5.1:65664842-65664861 MS.gene51085:CDS 50.0%
GGGTGTGTGTAATGACCAGA+TGG - chr5.1:65664491-65664510 MS.gene51085:CDS 50.0%
GGTGTTAGACAGAGGACTTG+GGG - chr5.1:65663928-65663947 MS.gene51085:CDS 50.0%
GTGTTAGACAGAGGACTTGG+GGG - chr5.1:65663929-65663948 MS.gene51085:CDS 50.0%
GTTGGGGAGTTTGCCTCATA+TGG - chr5.1:65664767-65664786 MS.gene51085:CDS 50.0%
TAATGCTTCTCTTGCGCCGT+TGG - chr5.1:65663699-65663718 MS.gene51085:CDS 50.0%
TTAGCCGGTGCTTTACGCTT+TGG + chr5.1:65663844-65663863 None:intergenic 50.0%
! ACACACGATTCTGTGCTGGT+TGG - chr5.1:65664465-65664484 MS.gene51085:CDS 50.0%
! GAGGTGTTAGACAGAGGACT+TGG - chr5.1:65663926-65663945 MS.gene51085:CDS 50.0%
!! AAGCGTAAAGCACCGGCTAA+AGG - chr5.1:65663844-65663863 MS.gene51085:CDS 50.0%
!! GATTCTGTGCTGGTTGGAGA+GGG - chr5.1:65664471-65664490 MS.gene51085:CDS 50.0%
CCTCTGAACTTCAATGGCGG+GGG - chr5.1:65664822-65664841 MS.gene51085:CDS 55.0%
CTCCCCAACAGCTTAGCATC+TGG + chr5.1:65664756-65664775 None:intergenic 55.0%
GACAGAGGACTTGGGGGAAA+TGG - chr5.1:65663935-65663954 MS.gene51085:CDS 55.0%
TCGCGCAGAAGGACCATACA+TGG + chr5.1:65664061-65664080 None:intergenic 55.0%
!! CGATTCTGTGCTGGTTGGAG+AGG - chr5.1:65664470-65664489 MS.gene51085:CDS 55.0%
CCCCCGCCATTGAAGTTCAG+AGG + chr5.1:65664825-65664844 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 65663670 65664923 65663670 ID=MS.gene51085
chr5.1 mRNA 65663670 65664923 65663670 ID=MS.gene51085.t1;Parent=MS.gene51085
chr5.1 exon 65663670 65664923 65663670 ID=MS.gene51085.t1.exon1;Parent=MS.gene51085.t1
chr5.1 CDS 65663670 65664923 65663670 ID=cds.MS.gene51085.t1;Parent=MS.gene51085.t1
Gene Sequence

>MS.gene51085

ATGGGTGCTCCTGCTTATGATCAATGTTTTAATGCTTCTCTTGCGCCGTTGGAATTATCGAAAAAGAGGAAAACTAGGAGTAGAGGAAAAGGAACTAAATCTGTAGCTGAGACTCTAACAAAATGGAAGGAATACAATGAGAAGCTTTATGCTGGTAAAGATGATGGTAAACCAAAGCGTAAAGCACCGGCTAAAGGTTCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGACCTCAAAACTCGGAGAATAAGTATCGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGCTGAAATTAGGGAACCAAATAGAGGAAGTAGACTTTGGTTAGGTACTTTTCGGACAGCTCAAGAAGCTGCTCTTGCTTATGATTATGCTGCTAGAGCCATGTATGGTCCTTCTGCGCGACTTAACTTTCCTGATATATCGGATTATAGTTGTATTCAGGAATATTTGAAAGATTCTTCAGCAGCAGCTGCTAGCTGTTGTTCTTCGGCAACAACGACTGCGACATCTGAGACAACAACTGTGTCTAGTCATTCTGAGGTTTGTGCTATTGAGGATGTTAAGGAGATACCTAGGATACCTGTTCATATGAACAACACTGTTGATGTTTGTTATAAAGGTTATGAAGCTACATCTCCAACTAGTAGAATGAAGCAAGAGCCAATGGATGAGCCTGATGATATCATAGACCTTGGTGGTGGTGAAATCCAAGATGTAAATTCAGAAGGAACTCAAACTCTAACACAACCACAAACATCGGGAACTCAAACTCTAACACAACCACAAACACACGATTCTGTGCTGGTTGGAGAGGGTGTGTGTAATGACCAGATGGATTTTTCATGGATGGATAACTTTGACTTCACTGATGATTATTTGAAGAGTTTTTCAGTGGATGAGTTTTTTCACGTGGATGATTTCTTTGAGGTGGATGAGCTTTTGGGGCAAATAGATAATAATCCGATTGATGATTCTGGGGTGATGCAAAGTTTGGATTTTGGACAAGTGGGTTTACCTGAAGAAAGTAATCCTCAGGTTGGGACTACTTCAAGCTTCTTTTATGAATTGGATAATCCAGATGCTAAGCTGTTGGGGAGTTTGCCTCATATGGAACACACAGCATCAGGTGTCGATTATGGATTACCTCTGAACTTCAATGGCGGGGGAGAAGATACACCGTTTCTGGATTTGGATTATGATCTAAATCACGATTCAAGAGGAATGCAAGGAAGGAAAAATGATTAG
Protein sequence

>MS.gene51085.t1

MGAPAYDQCFNASLAPLELSKKRKTRSRGKGTKSVAETLTKWKEYNEKLYAGKDDGKPKRKAPAKGSKKGCMKGKGGPQNSENKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFRTAQEAALAYDYAARAMYGPSARLNFPDISDYSCIQEYLKDSSAAAASCCSSATTTATSETTTVSSHSEVCAIEDVKEIPRIPVHMNNTVDVCYKGYEATSPTSRMKQEPMDEPDDIIDLGGGEIQDVNSEGTQTLTQPQTSGTQTLTQPQTHDSVLVGEGVCNDQMDFSWMDNFDFTDDYLKSFSVDEFFHVDDFFEVDELLGQIDNNPIDDSGVMQSLDFGQVGLPEESNPQVGTTSSFFYELDNPDAKLLGSLPHMEHTASGVDYGLPLNFNGGGEDTPFLDLDYDLNHDSRGMQGRKND