Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051678.t1 | XP_003589050.2 | 96.2 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.00E+00 | 1088.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051678.t1 | Q43207 | 52.7 | 528 | 241 | 5 | 24 | 546 | 28 | 551 | 2.8e-148 | 526.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051678.t1 | G7IBB7 | 96.2 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.0e+00 | 1088.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051678 | MS.gene053294 | 0.835355 | 1.76E-56 | -1.69E-46 |
| MS.gene051678 | MS.gene053401 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene05548 | 0.810849 | 9.40E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene057079 | 0.807766 | 4.30E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene058498 | 0.815828 | 7.57E-52 | -1.69E-46 |
| MS.gene051678 | MS.gene060586 | 0.802621 | 5.14E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene061900 | 0.830234 | 3.29E-55 | -1.69E-46 |
| MS.gene051678 | MS.gene06883 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene072213 | 0.815037 | 1.13E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene09850 | 0.833274 | 5.86E-56 | -1.69E-46 |
| MS.gene051678 | MS.gene23264 | 0.82459 | 7.43E-54 | -1.69E-46 |
| MS.gene051678 | MS.gene24490 | 0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene051678 | MS.gene24692 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene26962 | 0.835104 | 2.04E-56 | -1.69E-46 |
| MS.gene051678 | MS.gene27314 | 0.836449 | 9.30E-57 | -1.69E-46 |
| MS.gene051678 | MS.gene29612 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene32551 | 0.845849 | 3.14E-59 | -1.69E-46 |
| MS.gene051678 | MS.gene32552 | 0.822558 | 2.22E-53 | -1.69E-46 |
| MS.gene051678 | MS.gene32720 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene32838 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene33129 | 0.829129 | 6.12E-55 | -1.69E-46 |
| MS.gene051678 | MS.gene33131 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene35069 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene051678 | MS.gene36472 | 0.819991 | 8.68E-53 | -1.69E-46 |
| MS.gene051678 | MS.gene37446 | 0.842457 | 2.56E-58 | -1.69E-46 |
| MS.gene051678 | MS.gene40709 | 0.806584 | 7.66E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene40711 | 0.811615 | 6.41E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene50546 | 0.808322 | 3.28E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene51085 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene51542 | 0.821818 | 3.30E-53 | -1.69E-46 |
| MS.gene051678 | MS.gene51544 | 0.815681 | 8.16E-52 | -1.69E-46 |
| MS.gene051678 | MS.gene56253 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene56468 | 0.816844 | 4.49E-52 | -1.69E-46 |
| MS.gene051678 | MS.gene56670 | 0.819519 | 1.11E-52 | -1.69E-46 |
| MS.gene051678 | MS.gene64517 | 0.820857 | 5.49E-53 | -1.69E-46 |
| MS.gene051678 | MS.gene65495 | 0.811038 | 8.55E-51 | -1.69E-46 |
| MS.gene051678 | MS.gene65946 | 0.829438 | 5.15E-55 | -1.69E-46 |
| MS.gene051678 | MS.gene66474 | 0.881262 | 2.78E-70 | -1.69E-46 |
| MS.gene051678 | MS.gene73877 | 0.807512 | 4.87E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene76100 | 0.801571 | 8.46E-49 | -1.69E-46 |
| MS.gene051678 | MS.gene80668 | 0.809941 | 1.48E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene80795 | 0.815555 | 8.71E-52 | -1.69E-46 |
| MS.gene051678 | MS.gene82387 | 0.800914 | 1.15E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051678.t1 | MTR_1g017870 | 96.207 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1125 |
| MS.gene051678.t1 | MTR_1g017870 | 96.000 | 550 | 22 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1044 |
| MS.gene051678.t1 | MTR_1g017870 | 96.017 | 477 | 18 | 1 | 104 | 580 | 80 | 555 | 0.0 | 922 |
| MS.gene051678.t1 | MTR_1g017870 | 32.203 | 236 | 135 | 7 | 40 | 258 | 127 | 354 | 5.59e-19 | 90.9 |
| MS.gene051678.t1 | MTR_1g017870 | 96.078 | 408 | 15 | 1 | 173 | 580 | 47 | 453 | 0.0 | 792 |
| MS.gene051678.t1 | MTR_1g017870 | 31.982 | 222 | 125 | 8 | 55 | 258 | 39 | 252 | 3.26e-17 | 84.7 |
| MS.gene051678.t1 | MTR_1g017870 | 95.767 | 378 | 16 | 0 | 173 | 550 | 47 | 424 | 0.0 | 738 |
| MS.gene051678.t1 | MTR_1g017870 | 31.982 | 222 | 125 | 8 | 55 | 258 | 39 | 252 | 3.67e-17 | 84.3 |
| MS.gene051678.t1 | MTR_1g017870 | 96.216 | 370 | 13 | 1 | 211 | 580 | 1 | 369 | 0.0 | 717 |
| MS.gene051678.t1 | MTR_1g017870 | 32.759 | 174 | 94 | 6 | 102 | 258 | 1 | 168 | 1.88e-14 | 75.5 |
| MS.gene051678.t1 | MTR_1g017870 | 95.882 | 340 | 14 | 0 | 211 | 550 | 1 | 340 | 0.0 | 663 |
| MS.gene051678.t1 | MTR_1g017870 | 32.759 | 174 | 94 | 6 | 102 | 258 | 1 | 168 | 1.59e-14 | 75.5 |
| MS.gene051678.t1 | MTR_7g053470 | 53.333 | 525 | 235 | 6 | 24 | 542 | 20 | 540 | 0.0 | 533 |
| MS.gene051678.t1 | MTR_8g080980 | 51.103 | 544 | 255 | 5 | 23 | 561 | 23 | 560 | 0.0 | 532 |
| MS.gene051678.t1 | MTR_8g012340 | 53.396 | 530 | 237 | 5 | 24 | 546 | 26 | 552 | 9.31e-178 | 514 |
| MS.gene051678.t1 | MTR_8g038785 | 47.181 | 337 | 162 | 7 | 54 | 380 | 185 | 515 | 1.18e-88 | 286 |
| MS.gene051678.t1 | MTR_8g038785 | 36.564 | 227 | 127 | 6 | 42 | 258 | 294 | 513 | 9.69e-25 | 108 |
| MS.gene051678.t1 | MTR_8g010620 | 43.109 | 341 | 186 | 4 | 130 | 466 | 5 | 341 | 5.85e-85 | 270 |
| MS.gene051678.t1 | MTR_8g010620 | 28.956 | 297 | 176 | 10 | 28 | 299 | 14 | 300 | 3.20e-19 | 90.1 |
| MS.gene051678.t1 | MTR_8g010620 | 43.109 | 341 | 186 | 4 | 130 | 466 | 41 | 377 | 1.87e-84 | 270 |
| MS.gene051678.t1 | MTR_8g010620 | 28.956 | 297 | 176 | 10 | 28 | 299 | 50 | 336 | 6.02e-19 | 89.7 |
| MS.gene051678.t1 | MTR_8g011100 | 44.237 | 321 | 153 | 4 | 144 | 461 | 86 | 383 | 6.05e-80 | 258 |
| MS.gene051678.t1 | MTR_8g011100 | 25.763 | 295 | 168 | 8 | 28 | 299 | 81 | 347 | 1.40e-12 | 70.1 |
| MS.gene051678.t1 | MTR_8g010620 | 41.761 | 352 | 172 | 5 | 144 | 466 | 55 | 402 | 1.14e-78 | 255 |
| MS.gene051678.t1 | MTR_8g010620 | 45.174 | 259 | 135 | 3 | 211 | 466 | 20 | 274 | 4.85e-64 | 213 |
| MS.gene051678.t1 | MTR_8g010620 | 29.412 | 221 | 126 | 7 | 102 | 299 | 20 | 233 | 3.37e-14 | 74.3 |
| MS.gene051678.t1 | MTR_4g055500 | 29.779 | 544 | 347 | 10 | 24 | 544 | 20 | 551 | 1.12e-56 | 201 |
| MS.gene051678.t1 | MTR_8g008640 | 38.014 | 292 | 130 | 3 | 91 | 380 | 69 | 311 | 4.20e-50 | 185 |
| MS.gene051678.t1 | MTR_8g008640 | 34.737 | 190 | 107 | 5 | 84 | 258 | 122 | 309 | 7.71e-24 | 106 |
| MS.gene051678.t1 | MTR_8g011140 | 37.546 | 269 | 128 | 6 | 137 | 399 | 31 | 265 | 1.25e-45 | 162 |
| MS.gene051678.t1 | MTR_8g011560 | 44.809 | 183 | 95 | 2 | 289 | 466 | 25 | 206 | 5.62e-45 | 159 |
| MS.gene051678.t1 | MTR_4g039430 | 31.579 | 304 | 189 | 9 | 254 | 544 | 37 | 334 | 7.96e-29 | 118 |
| MS.gene051678.t1 | MTR_8g023740 | 43.506 | 154 | 77 | 5 | 171 | 321 | 7 | 153 | 9.80e-28 | 109 |
| MS.gene051678.t1 | MTR_8g011580 | 32.420 | 219 | 106 | 4 | 263 | 466 | 74 | 265 | 1.38e-27 | 113 |
| MS.gene051678.t1 | MTR_8g011580 | 32.353 | 204 | 98 | 8 | 137 | 328 | 67 | 242 | 3.29e-16 | 80.1 |
| MS.gene051678.t1 | MTR_8g012360 | 31.604 | 212 | 123 | 5 | 261 | 467 | 58 | 252 | 1.16e-24 | 103 |
| MS.gene051678.t1 | MTR_8g012360 | 32.812 | 192 | 69 | 7 | 104 | 258 | 1 | 169 | 1.86e-18 | 85.9 |
| MS.gene051678.t1 | MTR_8g011110 | 40.741 | 81 | 48 | 0 | 341 | 421 | 19 | 99 | 4.80e-15 | 73.2 |
| MS.gene051678.t1 | MTR_7g059150 | 36.752 | 117 | 66 | 1 | 396 | 512 | 95 | 203 | 1.89e-12 | 68.2 |
| MS.gene051678.t1 | MTR_8g014190 | 44.444 | 72 | 40 | 0 | 355 | 426 | 4 | 75 | 4.94e-12 | 63.9 |
| MS.gene051678.t1 | MTR_8g079690 | 31.579 | 171 | 93 | 6 | 381 | 541 | 203 | 359 | 3.29e-11 | 65.5 |
| MS.gene051678.t1 | MTR_8g012350 | 47.273 | 55 | 29 | 0 | 315 | 369 | 17 | 71 | 3.29e-11 | 59.7 |
| MS.gene051678.t1 | MTR_2g090135 | 32.653 | 147 | 88 | 2 | 396 | 542 | 98 | 233 | 3.70e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051678.t1 | AT3G25230 | 53.042 | 526 | 237 | 5 | 27 | 546 | 29 | 550 | 0.0 | 545 |
| MS.gene051678.t1 | AT3G25230 | 53.257 | 522 | 234 | 5 | 27 | 542 | 29 | 546 | 0.0 | 543 |
| MS.gene051678.t1 | AT5G48570 | 51.698 | 530 | 245 | 7 | 21 | 542 | 30 | 556 | 0.0 | 531 |
| MS.gene051678.t1 | AT1G58450 | 60.256 | 156 | 61 | 1 | 387 | 542 | 1 | 155 | 2.12e-58 | 192 |
| MS.gene051678.t1 | AT3G54010 | 30.361 | 527 | 324 | 11 | 42 | 541 | 36 | 546 | 1.26e-54 | 196 |
| MS.gene051678.t1 | AT3G54010 | 29.583 | 240 | 151 | 6 | 149 | 380 | 32 | 261 | 2.69e-16 | 82.8 |
| MS.gene051678.t1 | AT3G54010 | 30.917 | 469 | 285 | 10 | 96 | 541 | 4 | 456 | 8.87e-50 | 181 |
| MS.gene051678.t1 | AT3G21640 | 31.690 | 284 | 186 | 6 | 267 | 544 | 48 | 329 | 1.37e-28 | 117 |
| MS.gene051678.t1 | AT4G30480 | 33.333 | 180 | 88 | 5 | 388 | 564 | 97 | 247 | 6.41e-14 | 72.8 |
| MS.gene051678.t1 | AT5G21990 | 34.677 | 124 | 75 | 1 | 392 | 515 | 99 | 216 | 1.42e-11 | 67.8 |
Find 152 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGAAAGTCATTCAGTTTA+AGG | 0.149462 | 1.3:+4894178 | None:intergenic |
| ATTAATATTACCTTTGTCTT+AGG | 0.223221 | 1.3:+4893082 | None:intergenic |
| GTTAGCAGAGATGGATCTTT+AGG | 0.231303 | 1.3:-4894267 | MS.gene051678:CDS |
| ATACATCCCGATTATGCTTT+TGG | 0.235249 | 1.3:-4895188 | MS.gene051678:CDS |
| AACATTTCCAAAAGCATAAT+CGG | 0.256443 | 1.3:+4895181 | None:intergenic |
| TTTGCTTGATGGAACCAAAT+TGG | 0.257054 | 1.3:-4897775 | MS.gene051678:CDS |
| AGAGGATGGGGTGGTGAAAA+TGG | 0.273488 | 1.3:-4892651 | MS.gene051678:CDS |
| GTCATAGTCATGATCACTTT+TGG | 0.278066 | 1.3:+4896365 | None:intergenic |
| ATCGGGATGTATACTGATTA+TGG | 0.284749 | 1.3:+4895199 | None:intergenic |
| ATCCCTAGCAGAACCCAATT+TGG | 0.291995 | 1.3:+4897761 | None:intergenic |
| CGCAAAGATGGCAGTGTTAT+CGG | 0.294603 | 1.3:-4898083 | None:intergenic |
| TGCCACCTCTCCTTTCTTCA+TGG | 0.300367 | 1.3:+4896971 | None:intergenic |
| TGGAATTATCAAGAAAATTA+TGG | 0.305364 | 1.3:-4896832 | MS.gene051678:CDS |
| TTGAGGTGGAACTCGTTTCT+TGG | 0.318251 | 1.3:-4896884 | MS.gene051678:CDS |
| TCTGTAGAACAAGTGATTAC+TGG | 0.347109 | 1.3:-4895263 | MS.gene051678:intron |
| TGCAACTATAGTGAAGTATC+AGG | 0.359533 | 1.3:-4896587 | MS.gene051678:intron |
| TATGTTGGAACTTTGCTTGA+TGG | 0.362150 | 1.3:-4897786 | MS.gene051678:CDS |
| AAGCCTGTCATAAATGTTAC+TGG | 0.362601 | 1.3:-4896069 | MS.gene051678:CDS |
| TGGTGTATGTAGATGCCTTT+GGG | 0.374569 | 1.3:-4896176 | MS.gene051678:intron |
| TTAGCAGAGATGGATCTTTA+GGG | 0.377376 | 1.3:-4894266 | MS.gene051678:CDS |
| TTGCTTGATGGAACCAAATT+GGG | 0.378964 | 1.3:-4897774 | MS.gene051678:CDS |
| ACATTACCTTCTGTTGTGTC+TGG | 0.381352 | 1.3:-4896942 | MS.gene051678:CDS |
| CTTAAACTGAATGACTTTCC+TGG | 0.382468 | 1.3:-4894177 | MS.gene051678:CDS |
| TTAAAGTATACAGGTTCAAC+AGG | 0.393822 | 1.3:+4892571 | None:intergenic |
| GGAGATAAAAGAAGATGAAC+TGG | 0.402641 | 1.3:-4898062 | MS.gene051678:CDS |
| AAGAAGAAGCTTCTCAAAAT+CGG | 0.406416 | 1.3:-4897956 | MS.gene051678:CDS |
| GTGGTGTATGTAGATGCCTT+TGG | 0.406796 | 1.3:-4896177 | MS.gene051678:intron |
| CGTAACATTTGCACCCTCAT+TGG | 0.412458 | 1.3:+4895993 | None:intergenic |
| GGGGAGAAGGGGAGTGAAGC+TGG | 0.417002 | 1.3:-4896156 | MS.gene051678:CDS |
| TGGGGTGGTGAAAATGGAAA+TGG | 0.423574 | 1.3:-4892645 | MS.gene051678:CDS |
| GTAACATGATCGTTGAAGTT+GGG | 0.436434 | 1.3:+4897917 | None:intergenic |
| CAATGAGGGTGCAAATGTTA+CGG | 0.438397 | 1.3:-4895992 | MS.gene051678:CDS |
| ATCAAGAAAATTATGGAGAA+GGG | 0.440426 | 1.3:-4896825 | MS.gene051678:CDS |
| GCTCCATGTTAATATTGAAT+TGG | 0.441324 | 1.3:-4896100 | MS.gene051678:CDS |
| AATGAGGGTGCAAATGTTAC+GGG | 0.443135 | 1.3:-4895991 | MS.gene051678:intron |
| TCTCAAAATCGGACACGGTT+GGG | 0.446035 | 1.3:-4897945 | MS.gene051678:CDS |
| TGTTCTCAAGCAGAGATTGA+AGG | 0.449530 | 1.3:-4892684 | MS.gene051678:intron |
| GGAAATTTATTATTTAAAAG+TGG | 0.450903 | 1.3:-4894433 | MS.gene051678:CDS |
| CTCATCGGTTACAAATTTCA+AGG | 0.451255 | 1.3:+4895401 | None:intergenic |
| TTAAGAAGATTATTAAAGAA+GGG | 0.454632 | 1.3:-4896032 | MS.gene051678:CDS |
| TCTTCATTGTTGCCACTGCT+CGG | 0.459281 | 1.3:+4895234 | None:intergenic |
| AACATTTATGACAGGCTTGA+AGG | 0.460983 | 1.3:+4896074 | None:intergenic |
| CAACTCGGTTGTGCAATTTG+AGG | 0.461614 | 1.3:-4896901 | MS.gene051678:CDS |
| ATTAAGAAGATTATTAAAGA+AGG | 0.463062 | 1.3:-4896033 | MS.gene051678:CDS |
| GTGGTGGATGTTTGCAAAGA+TGG | 0.463377 | 1.3:-4896855 | MS.gene051678:CDS |
| CTCAAAAGCTCGGCGAAGAA+AGG | 0.465629 | 1.3:-4898003 | MS.gene051678:CDS |
| TAGAATTCAACTCCTCCTTC+CGG | 0.473527 | 1.3:+4896529 | None:intergenic |
| GCTGATTCGATGACTTCGCC+TGG | 0.474604 | 1.3:+4898031 | None:intergenic |
| TTGAGAAGCTTCTTCTTGAT+CGG | 0.478508 | 1.3:+4897962 | None:intergenic |
| CTTCTTCTTGATCGGCGAGT+TGG | 0.483947 | 1.3:+4897970 | None:intergenic |
| TTGAAATTTGTAACCGATGA+GGG | 0.487322 | 1.3:-4895399 | MS.gene051678:intron |
| AGGTTGAGAAAGAAGAGGAT+GGG | 0.490164 | 1.3:-4892664 | MS.gene051678:CDS |
| CGTTTCTTGGATCACGGTGG+TGG | 0.490362 | 1.3:-4896871 | MS.gene051678:CDS |
| TTGAGGTGGATCCACAAAAC+AGG | 0.492021 | 1.3:-4893283 | MS.gene051678:intron |
| AAGGGGAGTGAAGCTGGCAG+CGG | 0.494246 | 1.3:-4896150 | MS.gene051678:CDS |
| TGTAGATGCCTTTGGGGAGA+AGG | 0.495613 | 1.3:-4896169 | MS.gene051678:intron |
| GTACATAGTTTGATTGCTCC+AGG | 0.496125 | 1.3:+4894159 | None:intergenic |
| TTAACATGGAGCATTGAGTC+TGG | 0.496455 | 1.3:+4896111 | None:intergenic |
| AAGGTTGAGAAAGAAGAGGA+TGG | 0.498928 | 1.3:-4892665 | MS.gene051678:CDS |
| ACATTTCCAAAAGCATAATC+GGG | 0.500114 | 1.3:+4895182 | None:intergenic |
| AGTAACATGATCGTTGAAGT+TGG | 0.501257 | 1.3:+4897916 | None:intergenic |
| AGCAGTGGCAACAATGAAGA+AGG | 0.504681 | 1.3:-4895231 | MS.gene051678:CDS |
| TCATTACTATTTAACTCCCA+TGG | 0.504757 | 1.3:+4894490 | None:intergenic |
| GGTTGAGAAAGAAGAGGATG+GGG | 0.505171 | 1.3:-4892663 | MS.gene051678:CDS |
| ATGCATGCAGTTCATTATGT+TGG | 0.505277 | 1.3:-4897801 | MS.gene051678:intron |
| GCAAAAGCATATATAGAGAC+AGG | 0.506388 | 1.3:-4893344 | MS.gene051678:CDS |
| TTCTCAAAATCGGACACGGT+TGG | 0.506403 | 1.3:-4897946 | MS.gene051678:CDS |
| TATCAAGAAAATTATGGAGA+AGG | 0.506761 | 1.3:-4896826 | MS.gene051678:CDS |
| AGGGGAGTGAAGCTGGCAGC+GGG | 0.512660 | 1.3:-4896149 | MS.gene051678:CDS |
| GGGGTGGTGAAAATGGAAAT+GGG | 0.512681 | 1.3:-4892644 | MS.gene051678:CDS |
| TGGATCTTTAGGGGATGATG+AGG | 0.513068 | 1.3:-4894256 | MS.gene051678:CDS |
| GAACCAAATTGGGTTCTGCT+AGG | 0.513359 | 1.3:-4897764 | MS.gene051678:CDS |
| AGGTGAATTGTATGCTGGAT+TGG | 0.515445 | 1.3:-4897009 | MS.gene051678:CDS |
| CTCAAATTGCACAACCGAGT+TGG | 0.515506 | 1.3:+4896902 | None:intergenic |
| GACAGCGCAGCTCCTTCTGA+TGG | 0.517117 | 1.3:-4892611 | MS.gene051678:CDS |
| TAAGAAGATTATTAAAGAAG+GGG | 0.517723 | 1.3:-4896031 | MS.gene051678:CDS |
| AAAATTATGGAGAAGGGGAA+AGG | 0.523585 | 1.3:-4896819 | MS.gene051678:CDS |
| GCTGGGAGGAAGAAAGAAGA+AGG | 0.524602 | 1.3:-4894454 | MS.gene051678:CDS |
| AACAATGAAGAAGGGTGAAA+GGG | 0.524996 | 1.3:-4895222 | MS.gene051678:CDS |
| AGCAGCGAAGAAGTATGATA+AGG | 0.525722 | 1.3:-4894398 | MS.gene051678:intron |
| TAACATGATCGTTGAAGTTG+GGG | 0.527154 | 1.3:+4897918 | None:intergenic |
| GTGATAGGTGAATTGTATGC+TGG | 0.527463 | 1.3:-4897014 | MS.gene051678:intron |
| TTGTATGCTGGATTGGATGA+TGG | 0.531924 | 1.3:-4897002 | MS.gene051678:CDS |
| GTAGATGCCTTTGGGGAGAA+GGG | 0.532024 | 1.3:-4896168 | MS.gene051678:intron |
| GAAGATTATTAAAGAAGGGG+AGG | 0.532650 | 1.3:-4896028 | MS.gene051678:CDS |
| GGAATCGTCACCATGAAGAA+AGG | 0.533318 | 1.3:-4896981 | MS.gene051678:CDS |
| AACCAAATTGGGTTCTGCTA+GGG | 0.534151 | 1.3:-4897763 | MS.gene051678:CDS |
| AGCGCAGCTCCTTCTGATGG+CGG | 0.535316 | 1.3:-4892608 | MS.gene051678:CDS |
| AAAATTAAACCGCCATCAGA+AGG | 0.538652 | 1.3:+4892599 | None:intergenic |
| AGTAGTGTATGACATTGAAA+TGG | 0.540195 | 1.3:-4895117 | MS.gene051678:CDS |
| CACTGTTGTTGCAGAAACTC+CGG | 0.541555 | 1.3:-4896548 | MS.gene051678:CDS |
| TATCAGGTGGCACTTGAAGA+TGG | 0.545537 | 1.3:-4896571 | MS.gene051678:CDS |
| TGAGAAAGAAGAGGATGGGG+TGG | 0.548915 | 1.3:-4892660 | MS.gene051678:CDS |
| AAATTATGGAGAAGGGGAAA+GGG | 0.550984 | 1.3:-4896818 | MS.gene051678:CDS |
| AAAATGGAAATGGGCAATGT+TGG | 0.553546 | 1.3:-4892635 | MS.gene051678:CDS |
| CTCGGTTGTGCAATTTGAGG+TGG | 0.556739 | 1.3:-4896898 | MS.gene051678:CDS |
| AATCGTTGAGAGTTTCATGC+TGG | 0.559876 | 1.3:-4894221 | MS.gene051678:CDS |
| TTCACTCCCCTTCTCCCCAA+AGG | 0.560275 | 1.3:+4896161 | None:intergenic |
| TACACAGCTATGCTAGAAGA+TGG | 0.564478 | 1.3:-4895462 | MS.gene051678:CDS |
| AAGGACTTCATCAAGATCAC+CGG | 0.570891 | 1.3:+4896785 | None:intergenic |
| CAACAATGAAGAAGGGTGAA+AGG | 0.574124 | 1.3:-4895223 | MS.gene051678:CDS |
| AAGATTATTAAAGAAGGGGA+GGG | 0.574208 | 1.3:-4896027 | MS.gene051678:CDS |
| GGTGATCTTGATGAAGTCCT+TGG | 0.574730 | 1.3:-4896783 | MS.gene051678:intron |
| GGAACTCGTTTCTTGGATCA+CGG | 0.577330 | 1.3:-4896877 | MS.gene051678:CDS |
| GATGAACTGGATGAAGAACC+AGG | 0.578061 | 1.3:-4898049 | MS.gene051678:CDS |
| TATGTTTGCACCTAAGACAA+AGG | 0.578769 | 1.3:-4893092 | MS.gene051678:intron |
| ATTGAAGGTTGAGAAAGAAG+AGG | 0.580336 | 1.3:-4892669 | MS.gene051678:CDS |
| AAGAATATACTCACCCTCAT+CGG | 0.581459 | 1.3:+4895386 | None:intergenic |
| TGTCCAAGAGAAAATGTGAC+AGG | 0.582221 | 1.3:+4897729 | None:intergenic |
| TCATCGGTTACAAATTTCAA+GGG | 0.583118 | 1.3:+4895402 | None:intergenic |
| AATAATCTTCTTAATCACCA+TGG | 0.585362 | 1.3:+4896041 | None:intergenic |
| TCACCAGTAACATTTATGAC+AGG | 0.588648 | 1.3:+4896066 | None:intergenic |
| TTCATAGGAGAAAGCACCAT+GGG | 0.589750 | 1.3:-4894506 | MS.gene051678:intron |
| TCAAGAAAATTATGGAGAAG+GGG | 0.591587 | 1.3:-4896824 | MS.gene051678:CDS |
| GTTGAATTCTATGTGAATGA+TGG | 0.593431 | 1.3:-4896517 | MS.gene051678:intron |
| AGTGTATGACATTGAAATGG+TGG | 0.597567 | 1.3:-4895114 | MS.gene051678:CDS |
| AGCAATCAAACTATGTACTC+AGG | 0.602316 | 1.3:-4894154 | MS.gene051678:intron |
| AAATGTTACTGGTGACTCCA+TGG | 0.602785 | 1.3:-4896058 | MS.gene051678:CDS |
| AGAGTTTCATGCTGGTTGAA+CGG | 0.605134 | 1.3:-4894213 | MS.gene051678:CDS |
| GGTGCTTTCACAGCCAATGA+GGG | 0.605431 | 1.3:-4896006 | MS.gene051678:CDS |
| TAGATGCCTTTGGGGAGAAG+GGG | 0.606372 | 1.3:-4896167 | MS.gene051678:CDS |
| AGACATCAAGAAAGCTCTTG+AGG | 0.606805 | 1.3:-4893300 | MS.gene051678:CDS |
| ACATGGAGCATTGAGTCTGG+TGG | 0.608526 | 1.3:+4896114 | None:intergenic |
| GTGGATGTTTGCAAAGATGG+TGG | 0.611915 | 1.3:-4896852 | MS.gene051678:CDS |
| AGTGATCATGACTATGACAA+GGG | 0.614434 | 1.3:-4896360 | MS.gene051678:CDS |
| TTGAGTCTGGTGGAATTGAA+CGG | 0.618484 | 1.3:+4896124 | None:intergenic |
| ACAACCGAGTTGGAGTCTTG+TGG | 0.620681 | 1.3:+4896912 | None:intergenic |
| TCAGCACCACCTCAAAAGCT+CGG | 0.625877 | 1.3:-4898013 | MS.gene051678:CDS |
| TAGCAGAGATGGATCTTTAG+GGG | 0.626024 | 1.3:-4894265 | MS.gene051678:CDS |
| CACCATGAAGAAAGGAGAGG+TGG | 0.628946 | 1.3:-4896973 | MS.gene051678:CDS |
| CATCAAGAAAGCTCTTGAGG+TGG | 0.629058 | 1.3:-4893297 | MS.gene051678:CDS |
| GGGTGCTTTCACAGCCAATG+AGG | 0.631209 | 1.3:-4896007 | MS.gene051678:CDS |
| GCAGTGGCAACAATGAAGAA+GGG | 0.633974 | 1.3:-4895230 | MS.gene051678:CDS |
| GATCTTGCTATTGTGCCACC+AGG | 0.635625 | 1.3:-4895146 | MS.gene051678:CDS |
| TACTGGTTTAGACCGAGCAG+TGG | 0.636057 | 1.3:-4895246 | MS.gene051678:CDS |
| GTTGCAGAAACTCCGGAAGG+AGG | 0.643747 | 1.3:-4896541 | MS.gene051678:CDS |
| AGGACTTCATCAAGATCACC+GGG | 0.647810 | 1.3:+4896786 | None:intergenic |
| CTTGAAATTTGTAACCGATG+AGG | 0.660754 | 1.3:-4895400 | MS.gene051678:CDS |
| AAGTGATCATGACTATGACA+AGG | 0.663430 | 1.3:-4896361 | MS.gene051678:CDS |
| AAGCTTCTCAAAATCGGACA+CGG | 0.665668 | 1.3:-4897950 | MS.gene051678:CDS |
| GGGAAAGGGAATGATCGACC+CGG | 0.668601 | 1.3:-4896804 | MS.gene051678:CDS |
| AACTATAGTGAAGTATCAGG+TGG | 0.675873 | 1.3:-4896584 | MS.gene051678:intron |
| ACACCAATTCAATATTAACA+TGG | 0.676472 | 1.3:+4896097 | None:intergenic |
| ATGCTTCCAGACACAACAGA+AGG | 0.678081 | 1.3:+4896936 | None:intergenic |
| GTGATCATGACTATGACAAG+GGG | 0.688661 | 1.3:-4896359 | MS.gene051678:CDS |
| CGTCACCATGAAGAAAGGAG+AGG | 0.691765 | 1.3:-4896976 | MS.gene051678:CDS |
| CATTCCACAAGACTCCAACT+CGG | 0.693089 | 1.3:-4896916 | MS.gene051678:CDS |
| ATTCATAGGAGAAAGCACCA+TGG | 0.695132 | 1.3:-4894507 | MS.gene051678:intron |
| AACATGATCGTTGAAGTTGG+GGG | 0.695655 | 1.3:+4897919 | None:intergenic |
| GTTGTTGCAGAAACTCCGGA+AGG | 0.715531 | 1.3:-4896544 | MS.gene051678:CDS |
| GGTGTATGTAGATGCCTTTG+GGG | 0.736707 | 1.3:-4896175 | MS.gene051678:intron |
| ACTCGTTTCTTGGATCACGG+TGG | 0.738230 | 1.3:-4896874 | MS.gene051678:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAATGTAATATGAT+TGG | + | chr1.3:4897204-4897223 | None:intergenic | 10.0% |
| !!! | ATTGATATTCTTTAATTTAA+AGG | - | chr1.3:4895915-4895934 | MS.gene051678:intron | 10.0% |
| !!! | TTTTTTTACTAAAAGATTAT+TGG | - | chr1.3:4894801-4894820 | MS.gene051678:intron | 10.0% |
| !! | AAATAGTAATGAAAAAATTG+AGG | - | chr1.3:4896183-4896202 | MS.gene051678:intron | 15.0% |
| !! | ACTTAAAAAAATTGTAATTG+AGG | + | chr1.3:4895793-4895812 | None:intergenic | 15.0% |
| !! | ATAAAATAAAGATATGATAC+TGG | + | chr1.3:4894387-4894406 | None:intergenic | 15.0% |
| !! | ATTAAGAAGATTATTAAAGA+AGG | - | chr1.3:4894629-4894648 | MS.gene051678:intron | 15.0% |
| !! | ATTGATATTTCATAAATTTG+AGG | + | chr1.3:4895716-4895735 | None:intergenic | 15.0% |
| !! | GGAAATTTATTATTTAAAAG+TGG | - | chr1.3:4896229-4896248 | MS.gene051678:intron | 15.0% |
| !! | TAAAATAAAGATATGATACT+GGG | + | chr1.3:4894386-4894405 | None:intergenic | 15.0% |
| !! | TAAATTCATAATGTTAATGT+GGG | - | chr1.3:4893624-4893643 | MS.gene051678:intron | 15.0% |
| !! | TTAAGAAGATTATTAAAGAA+GGG | - | chr1.3:4894630-4894649 | MS.gene051678:intron | 15.0% |
| !! | TTGATATTTCATAAATTTGA+GGG | + | chr1.3:4895715-4895734 | None:intergenic | 15.0% |
| !! | TTTATTTGATTCAAATTCAT+AGG | - | chr1.3:4896141-4896160 | MS.gene051678:CDS | 15.0% |
| !!! | ATATCTTTATTTTATGTTTC+TGG | - | chr1.3:4894392-4894411 | MS.gene051678:intron | 15.0% |
| !!! | ATTTAGTATAGATTTTATGT+GGG | - | chr1.3:4893026-4893045 | MS.gene051678:intron | 15.0% |
| !!! | TATTTAGTATAGATTTTATG+TGG | - | chr1.3:4893025-4893044 | MS.gene051678:intron | 15.0% |
| !! | AAATTGAACATTCGATTTAA+GGG | + | chr1.3:4895744-4895763 | None:intergenic | 20.0% |
| !! | ACAAAACAGGTAATTATAAA+TGG | - | chr1.3:4897392-4897411 | MS.gene051678:intron | 20.0% |
| !! | ATAGTTATTATAGAAGTCAA+CGG | - | chr1.3:4894988-4895007 | MS.gene051678:intron | 20.0% |
| !! | ATTAATATTACCTTTGTCTT+AGG | + | chr1.3:4897583-4897602 | None:intergenic | 20.0% |
| !! | GTAAATTCATAATGTTAATG+TGG | - | chr1.3:4893623-4893642 | MS.gene051678:intron | 20.0% |
| !! | GTGACTATAAATAACAATAT+CGG | - | chr1.3:4893166-4893185 | MS.gene051678:CDS | 20.0% |
| !! | TAAATTGAACATTCGATTTA+AGG | + | chr1.3:4895745-4895764 | None:intergenic | 20.0% |
| !! | TAAGAAGATTATTAAAGAAG+GGG | - | chr1.3:4894631-4894650 | MS.gene051678:intron | 20.0% |
| !! | TATGCTAAAATGAACATTAA+GGG | + | chr1.3:4894884-4894903 | None:intergenic | 20.0% |
| !! | TCATAAACAGTTGATTATAT+GGG | + | chr1.3:4895340-4895359 | None:intergenic | 20.0% |
| !! | TGACTATAAATAACAATATC+GGG | - | chr1.3:4893167-4893186 | MS.gene051678:CDS | 20.0% |
| !! | TGGAATTATCAAGAAAATTA+TGG | - | chr1.3:4893830-4893849 | MS.gene051678:intron | 20.0% |
| !!! | AGACTAATTATTTGAGATAT+TGG | + | chr1.3:4894451-4894470 | None:intergenic | 20.0% |
| !!! | ATTTATAATTACCTGTTTTG+TGG | + | chr1.3:4897393-4897412 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAATTCACGACTT+TGG | - | chr1.3:4896333-4896352 | MS.gene051678:CDS | 20.0% |
| !!! | TACTATAATTTGAAATCCAA+AGG | + | chr1.3:4893055-4893074 | None:intergenic | 20.0% |
| !!! | TGTAATTTTTGCCAAAATTA+CGG | - | chr1.3:4893526-4893545 | MS.gene051678:intron | 20.0% |
| !!! | TTATAGTATTGAAGTTGTAT+CGG | - | chr1.3:4893067-4893086 | MS.gene051678:intron | 20.0% |
| !!! | TTTTTTTATATAGACTGTGA+TGG | - | chr1.3:4895635-4895654 | MS.gene051678:intron | 20.0% |
| ! | AAACATGCTTGAAATAATAG+TGG | - | chr1.3:4896725-4896744 | MS.gene051678:intron | 25.0% |
| ! | AACAAAAAACATGTGACATA+AGG | + | chr1.3:4897879-4897898 | None:intergenic | 25.0% |
| ! | AACAGAAAACATCGTTAAAA+TGG | + | chr1.3:4893979-4893998 | None:intergenic | 25.0% |
| ! | AATAATCTTCTTAATCACCA+TGG | + | chr1.3:4894624-4894643 | None:intergenic | 25.0% |
| ! | AATCCAACAATTAATTTCTC+AGG | + | chr1.3:4897431-4897450 | None:intergenic | 25.0% |
| ! | AATGACTCACATTTCATTAT+TGG | - | chr1.3:4894700-4894719 | MS.gene051678:intron | 25.0% |
| ! | ACACCAATTCAATATTAACA+TGG | + | chr1.3:4894568-4894587 | None:intergenic | 25.0% |
| ! | ACTATTATTTCAAGCATGTT+TGG | + | chr1.3:4896726-4896745 | None:intergenic | 25.0% |
| ! | ACTTATATCATTTACTAGCA+TGG | - | chr1.3:4896020-4896039 | MS.gene051678:CDS | 25.0% |
| ! | ATCAAGAAAATTATGGAGAA+GGG | - | chr1.3:4893837-4893856 | MS.gene051678:intron | 25.0% |
| ! | ATTTAACATGACATTAGAGT+CGG | - | chr1.3:4893294-4893313 | MS.gene051678:CDS | 25.0% |
| ! | CATAAACAGTTGATTATATG+GGG | + | chr1.3:4895339-4895358 | None:intergenic | 25.0% |
| ! | CCTTCAACAAGTAAAATAAT+TGG | + | chr1.3:4894258-4894277 | None:intergenic | 25.0% |
| ! | GTATGCTAAAATGAACATTA+AGG | + | chr1.3:4894885-4894904 | None:intergenic | 25.0% |
| ! | GTCATAAACAGTTGATTATA+TGG | + | chr1.3:4895341-4895360 | None:intergenic | 25.0% |
| ! | TAGTAATGAAAAAATTGAGG+TGG | - | chr1.3:4896186-4896205 | MS.gene051678:intron | 25.0% |
| ! | TATAATATTGCAGGACAAAA+AGG | + | chr1.3:4897093-4897112 | None:intergenic | 25.0% |
| ! | TATCAAGAAAATTATGGAGA+AGG | - | chr1.3:4893836-4893855 | MS.gene051678:intron | 25.0% |
| ! | TCAAAAGAATAAGTGTGATA+TGG | + | chr1.3:4897249-4897268 | None:intergenic | 25.0% |
| ! | TCAAAGTTGTTGCAAATAAA+GGG | + | chr1.3:4896294-4896313 | None:intergenic | 25.0% |
| ! | TGTATGGGTTTATAACATAA+TGG | - | chr1.3:4896691-4896710 | MS.gene051678:intron | 25.0% |
| ! | TTTAAAGATAGGTTCATGTT+GGG | + | chr1.3:4896861-4896880 | None:intergenic | 25.0% |
| ! | TTTGAGCTTCAACAAAATTA+CGG | + | chr1.3:4893504-4893523 | None:intergenic | 25.0% |
| !! | AACATTTCCAAAAGCATAAT+CGG | + | chr1.3:4895484-4895503 | None:intergenic | 25.0% |
| !! | AGGTCTTTCATTAATTTTCA+TGG | - | chr1.3:4895852-4895871 | MS.gene051678:intron | 25.0% |
| !! | GATTCATGAAGTCTTTTATT+TGG | + | chr1.3:4894421-4894440 | None:intergenic | 25.0% |
| !! | GTGGATTTTATTAAGGTAAA+AGG | - | chr1.3:4895567-4895586 | MS.gene051678:intron | 25.0% |
| !! | TTACTCTTAGAATTTAGGTT+GGG | - | chr1.3:4897643-4897662 | MS.gene051678:intron | 25.0% |
| !! | TTGTGTTACTCTTAGAATTT+AGG | - | chr1.3:4897638-4897657 | MS.gene051678:intron | 25.0% |
| !!! | CCAATTATTTTACTTGTTGA+AGG | - | chr1.3:4894255-4894274 | MS.gene051678:CDS | 25.0% |
| !!! | TCAACAAAGAAAGCATTAAA+GGG | + | chr1.3:4892840-4892859 | None:intergenic | 25.0% |
| !!! | TGAAATGATGGATTTTTTCA+GGG | + | chr1.3:4896945-4896964 | None:intergenic | 25.0% |
| !!! | TGAAATGGTGGATTTTATTA+AGG | - | chr1.3:4895560-4895579 | MS.gene051678:intron | 25.0% |
| !!! | TGTTGATTGTAAGTTTTCAT+TGG | - | chr1.3:4897908-4897927 | MS.gene051678:intron | 25.0% |
| !!! | TTCAACAAAGAAAGCATTAA+AGG | + | chr1.3:4892841-4892860 | None:intergenic | 25.0% |
| !!! | TTGAAATGATGGATTTTTTC+AGG | + | chr1.3:4896946-4896965 | None:intergenic | 25.0% |
| !!! | TTGCTACTTTGTAAATTTGA+GGG | - | chr1.3:4895944-4895963 | MS.gene051678:intron | 25.0% |
| !!! | TTTGCTACTTTGTAAATTTG+AGG | - | chr1.3:4895943-4895962 | MS.gene051678:intron | 25.0% |
| AAAAGACTTCATGAATCCTA+CGG | - | chr1.3:4894424-4894443 | MS.gene051678:CDS | 30.0% | |
| AAATAATTGGTCACAAAGAC+TGG | + | chr1.3:4894245-4894264 | None:intergenic | 30.0% | |
| AAGAAGAAGCTTCTCAAAAT+CGG | - | chr1.3:4892706-4892725 | MS.gene051678:intron | 30.0% | |
| AAGATTATTAAAGAAGGGGA+GGG | - | chr1.3:4894635-4894654 | MS.gene051678:intron | 30.0% | |
| AAGGCAGATCATATATACAT+TGG | - | chr1.3:4893382-4893401 | MS.gene051678:CDS | 30.0% | |
| AATAATTGGTCACAAAGACT+GGG | + | chr1.3:4894244-4894263 | None:intergenic | 30.0% | |
| AATGTCATGTTAAATGAGCT+TGG | + | chr1.3:4893289-4893308 | None:intergenic | 30.0% | |
| AGCTTATCATTATGAGAACA+TGG | - | chr1.3:4897454-4897473 | MS.gene051678:intron | 30.0% | |
| AGTAGTGTATGACATTGAAA+TGG | - | chr1.3:4895545-4895564 | MS.gene051678:intron | 30.0% | |
| ATCAACTGTTTATGACTTCT+AGG | - | chr1.3:4895345-4895364 | MS.gene051678:intron | 30.0% | |
| ATGTGGTGTTTATAAAGCTT+GGG | + | chr1.3:4897711-4897730 | None:intergenic | 30.0% | |
| ATTATTTCAAGCATGTTTGG+AGG | + | chr1.3:4896723-4896742 | None:intergenic | 30.0% | |
| ATTGCACAAGAAAGTAAAAG+AGG | - | chr1.3:4895116-4895135 | MS.gene051678:CDS | 30.0% | |
| ATTTCATAAATTTGAGGGAC+TGG | + | chr1.3:4895710-4895729 | None:intergenic | 30.0% | |
| CAACATGAACCTATCTTTAA+AGG | - | chr1.3:4896860-4896879 | MS.gene051678:CDS | 30.0% | |
| GACTATTTAAGTCAATATGC+AGG | - | chr1.3:4895832-4895851 | MS.gene051678:intron | 30.0% | |
| GCATAAAGATGAAGATGATT+AGG | + | chr1.3:4892780-4892799 | None:intergenic | 30.0% | |
| GCTCCATGTTAATATTGAAT+TGG | - | chr1.3:4894562-4894581 | MS.gene051678:intron | 30.0% | |
| GTCAAAGTTGTTGCAAATAA+AGG | + | chr1.3:4896295-4896314 | None:intergenic | 30.0% | |
| GTTACTCTTAGAATTTAGGT+TGG | - | chr1.3:4897642-4897661 | MS.gene051678:intron | 30.0% | |
| GTTGAATTCTATGTGAATGA+TGG | - | chr1.3:4894145-4894164 | MS.gene051678:intron | 30.0% | |
| TATGTGAATGATGGTAATAC+CGG | - | chr1.3:4894154-4894173 | MS.gene051678:intron | 30.0% | |
| TCAAGAAAATTATGGAGAAG+GGG | - | chr1.3:4893838-4893857 | MS.gene051678:intron | 30.0% | |
| TCAATGCAAACTTGAAATGA+TGG | + | chr1.3:4896957-4896976 | None:intergenic | 30.0% | |
| TCATGTACGAATTGTCAAAT+GGG | + | chr1.3:4893362-4893381 | None:intergenic | 30.0% | |
| TCATTACTATTTAACTCCCA+TGG | + | chr1.3:4896175-4896194 | None:intergenic | 30.0% | |
| TCTCCTGAGAAATTAATTGT+TGG | - | chr1.3:4897425-4897444 | MS.gene051678:intron | 30.0% | |
| TTCATGTACGAATTGTCAAA+TGG | + | chr1.3:4893363-4893382 | None:intergenic | 30.0% | |
| TTCATTGTGTTGGATGTTAA+GGG | + | chr1.3:4897767-4897786 | None:intergenic | 30.0% | |
| TTGAAATTTGTAACCGATGA+GGG | - | chr1.3:4895263-4895282 | MS.gene051678:intron | 30.0% | |
| TTGCACAAGAAAGTAAAAGA+GGG | - | chr1.3:4895117-4895136 | MS.gene051678:CDS | 30.0% | |
| TTTAACATGACATTAGAGTC+GGG | - | chr1.3:4893295-4893314 | MS.gene051678:CDS | 30.0% | |
| TTTGACAATTCGTACATGAA+AGG | - | chr1.3:4893363-4893382 | MS.gene051678:CDS | 30.0% | |
| ! | AACATGGTTTTTCATTTTCC+AGG | - | chr1.3:4897470-4897489 | MS.gene051678:intron | 30.0% |
| ! | AAGCTTTATAAACACCACAT+GGG | - | chr1.3:4897711-4897730 | MS.gene051678:intron | 30.0% |
| ! | ACATGGTTTTTCATTTTCCA+GGG | - | chr1.3:4897471-4897490 | MS.gene051678:intron | 30.0% |
| ! | ACATTTCCAAAAGCATAATC+GGG | + | chr1.3:4895483-4895502 | None:intergenic | 30.0% |
| ! | AGAATGGATTCAGAACTATA+AGG | - | chr1.3:4894740-4894759 | MS.gene051678:intron | 30.0% |
| ! | AGTCTTGAATTGTTTTCATG+TGG | - | chr1.3:4894466-4894485 | MS.gene051678:CDS | 30.0% |
| ! | CTTTAAAGATAGGTTCATGT+TGG | + | chr1.3:4896862-4896881 | None:intergenic | 30.0% |
| ! | TCACACTTATTCTTTTGATC+AGG | - | chr1.3:4897251-4897270 | MS.gene051678:intron | 30.0% |
| ! | TCAGTTGATTCAAATCAGAA+TGG | - | chr1.3:4894724-4894743 | MS.gene051678:intron | 30.0% |
| ! | TCATCATTCAGCTTTTAACA+TGG | - | chr1.3:4897155-4897174 | MS.gene051678:intron | 30.0% |
| ! | TCATCGGTTACAAATTTCAA+GGG | + | chr1.3:4895263-4895282 | None:intergenic | 30.0% |
| !! | AGGAAAAAGTACTAGAAGTA+TGG | - | chr1.3:4895085-4895104 | MS.gene051678:intron | 30.0% |
| !! | TCCTATTTTATTTCACCGAA+CGG | - | chr1.3:4894196-4894215 | MS.gene051678:CDS | 30.0% |
| !! | TTCATTTTAGCATACCTAGT+GGG | - | chr1.3:4894890-4894909 | MS.gene051678:intron | 30.0% |
| !!! | CTAGTACTTTTTCCTACAAT+AGG | + | chr1.3:4895080-4895099 | None:intergenic | 30.0% |
| !!! | TGCTGTATTTCTCTTTTTTC+TGG | - | chr1.3:4893998-4894017 | MS.gene051678:intron | 30.0% |
| !!! | TGTCAGCTTATTAGTCTTTT+TGG | - | chr1.3:4894045-4894064 | MS.gene051678:intron | 30.0% |
| AAAAACTAGCTCAAAGGATG+AGG | + | chr1.3:4893255-4893274 | None:intergenic | 35.0% | |
| AAAACTAGCTCAAAGGATGA+GGG | + | chr1.3:4893254-4893273 | None:intergenic | 35.0% | |
| AAAATGGAAATGGGCAATGT+TGG | - | chr1.3:4898027-4898046 | MS.gene051678:CDS | 35.0% | |
| AAAATTAAACCGCCATCAGA+AGG | + | chr1.3:4898066-4898085 | None:intergenic | 35.0% | |
| AAAATTATGGAGAAGGGGAA+AGG | - | chr1.3:4893843-4893862 | MS.gene051678:intron | 35.0% | |
| AAATTACCCAATCCTAACAC+AGG | - | chr1.3:4893137-4893156 | MS.gene051678:CDS | 35.0% | |
| AAATTACCGTCACGTTATCA+AGG | + | chr1.3:4894839-4894858 | None:intergenic | 35.0% | |
| AAATTATGGAGAAGGGGAAA+GGG | - | chr1.3:4893844-4893863 | MS.gene051678:intron | 35.0% | |
| AACAATGAAGAAGGGTGAAA+GGG | - | chr1.3:4895440-4895459 | MS.gene051678:CDS | 35.0% | |
| AACATTTATGACAGGCTTGA+AGG | + | chr1.3:4894591-4894610 | None:intergenic | 35.0% | |
| AACCGATGATGAACAAATCA+CGG | + | chr1.3:4893416-4893435 | None:intergenic | 35.0% | |
| AAGAATATACTCACCCTCAT+CGG | + | chr1.3:4895279-4895298 | None:intergenic | 35.0% | |
| AAGCCTGTCATAAATGTTAC+TGG | - | chr1.3:4894593-4894612 | MS.gene051678:intron | 35.0% | |
| AAGTGATCATGACTATGACA+AGG | - | chr1.3:4894301-4894320 | MS.gene051678:intron | 35.0% | |
| AATCAAAACACACGCTTAGA+GGG | + | chr1.3:4893451-4893470 | None:intergenic | 35.0% | |
| AATGAAAAAATTGAGGTGGC+TGG | - | chr1.3:4896190-4896209 | MS.gene051678:intron | 35.0% | |
| AATGTTAATGTGGGTGTGAT+AGG | - | chr1.3:4893633-4893652 | MS.gene051678:intron | 35.0% | |
| AATTACCCAATCCTAACACA+GGG | - | chr1.3:4893138-4893157 | MS.gene051678:CDS | 35.0% | |
| AATTACCGTCACGTTATCAA+GGG | + | chr1.3:4894838-4894857 | None:intergenic | 35.0% | |
| AGCAATCAAACTATGTACTC+AGG | - | chr1.3:4896508-4896527 | MS.gene051678:intron | 35.0% | |
| AGGAAATATATCCTCTTCCT+TGG | - | chr1.3:4895587-4895606 | MS.gene051678:intron | 35.0% | |
| AGTAACATGATCGTTGAAGT+TGG | + | chr1.3:4892749-4892768 | None:intergenic | 35.0% | |
| AGTCCAGTATAAACGAATTC+AGG | - | chr1.3:4896907-4896926 | MS.gene051678:CDS | 35.0% | |
| AGTGATCATGACTATGACAA+GGG | - | chr1.3:4894302-4894321 | MS.gene051678:intron | 35.0% | |
| AGTGTATGACATTGAAATGG+TGG | - | chr1.3:4895548-4895567 | MS.gene051678:intron | 35.0% | |
| ATCCCTGAATTCGTTTATAC+TGG | + | chr1.3:4896913-4896932 | None:intergenic | 35.0% | |
| ATGAAAAAATTGAGGTGGCT+GGG | - | chr1.3:4896191-4896210 | MS.gene051678:intron | 35.0% | |
| ATGAAATCATATTCCCCGTT+CGG | + | chr1.3:4894214-4894233 | None:intergenic | 35.0% | |
| ATGCATGCAGTTCATTATGT+TGG | - | chr1.3:4892861-4892880 | MS.gene051678:intron | 35.0% | |
| ATGTGACATAAGGTAACTGT+TGG | + | chr1.3:4897869-4897888 | None:intergenic | 35.0% | |
| ATTAACTCGACTTTGATGCT+TGG | + | chr1.3:4896593-4896612 | None:intergenic | 35.0% | |
| ATTCAACAACAAGAGAACCT+TGG | + | chr1.3:4893105-4893124 | None:intergenic | 35.0% | |
| ATTCACCTTAGTGCAATGTA+TGG | + | chr1.3:4893587-4893606 | None:intergenic | 35.0% | |
| ATTGAAGGTTGAGAAAGAAG+AGG | - | chr1.3:4897993-4898012 | MS.gene051678:CDS | 35.0% | |
| ATTGACCTAACAAACTGAAG+AGG | - | chr1.3:4896972-4896991 | MS.gene051678:CDS | 35.0% | |
| ATTTGAAAAGCCGATCTGTA+AGG | - | chr1.3:4896772-4896791 | MS.gene051678:intron | 35.0% | |
| CAAAACCAATCAGTAAACAG+TGG | + | chr1.3:4895157-4895176 | None:intergenic | 35.0% | |
| CAAGAAAGTAAAAGAGGGAA+AGG | - | chr1.3:4895122-4895141 | MS.gene051678:CDS | 35.0% | |
| CAGGAAAGTCATTCAGTTTA+AGG | + | chr1.3:4896487-4896506 | None:intergenic | 35.0% | |
| CATGTGGTGTTTATAAAGCT+TGG | + | chr1.3:4897712-4897731 | None:intergenic | 35.0% | |
| CTACGAAAAAGTCCTATTGT+AGG | - | chr1.3:4895065-4895084 | MS.gene051678:intron | 35.0% | |
| CTTAAACTGAATGACTTTCC+TGG | - | chr1.3:4896485-4896504 | MS.gene051678:intron | 35.0% | |
| CTTAACATCCAACACAATGA+AGG | - | chr1.3:4897766-4897785 | MS.gene051678:CDS | 35.0% | |
| CTTCATTGTGTTGGATGTTA+AGG | + | chr1.3:4897768-4897787 | None:intergenic | 35.0% | |
| CTTGAAATTTGTAACCGATG+AGG | - | chr1.3:4895262-4895281 | MS.gene051678:intron | 35.0% | |
| GAAACCCAAATACCACAATT+AGG | - | chr1.3:4897809-4897828 | MS.gene051678:intron | 35.0% | |
| GAAGATTATTAAAGAAGGGG+AGG | - | chr1.3:4894634-4894653 | MS.gene051678:intron | 35.0% | |
| GATGTGTCTATCTACATTAG+TGG | - | chr1.3:4896101-4896120 | MS.gene051678:CDS | 35.0% | |
| GGAGATAAAAGAAGATGAAC+TGG | - | chr1.3:4892600-4892619 | MS.gene051678:CDS | 35.0% | |
| GTAACATGATCGTTGAAGTT+GGG | + | chr1.3:4892748-4892767 | None:intergenic | 35.0% | |
| GTCCAGTATAAACGAATTCA+GGG | - | chr1.3:4896908-4896927 | MS.gene051678:CDS | 35.0% | |
| TAACATGATCGTTGAAGTTG+GGG | + | chr1.3:4892747-4892766 | None:intergenic | 35.0% | |
| TATGTTGGAACTTTGCTTGA+TGG | - | chr1.3:4892876-4892895 | MS.gene051678:intron | 35.0% | |
| TATGTTTGCACCTAAGACAA+AGG | - | chr1.3:4897570-4897589 | MS.gene051678:intron | 35.0% | |
| TCACCAGTAACATTTATGAC+AGG | + | chr1.3:4894599-4894618 | None:intergenic | 35.0% | |
| TCATTGTGTTGGATGTTAAG+GGG | + | chr1.3:4897766-4897785 | None:intergenic | 35.0% | |
| TCTGTAGAACAAGTGATTAC+TGG | - | chr1.3:4895399-4895418 | MS.gene051678:intron | 35.0% | |
| TGGCTACACTTATATAACTC+AGG | + | chr1.3:4897184-4897203 | None:intergenic | 35.0% | |
| TGTCGACAATTACAATTTCG+AGG | - | chr1.3:4895975-4895994 | MS.gene051678:intron | 35.0% | |
| TTAGCAGAGATGGATCTTTA+GGG | - | chr1.3:4896396-4896415 | MS.gene051678:intron | 35.0% | |
| TTCGCCATTGAAAATTGCAA+GGG | - | chr1.3:4895675-4895694 | MS.gene051678:intron | 35.0% | |
| TTGAGAAGCTTCTTCTTGAT+CGG | + | chr1.3:4892703-4892722 | None:intergenic | 35.0% | |
| TTGCTTGATGGAACCAAATT+GGG | - | chr1.3:4892888-4892907 | MS.gene051678:intron | 35.0% | |
| TTTCGCCATTGAAAATTGCA+AGG | - | chr1.3:4895674-4895693 | MS.gene051678:intron | 35.0% | |
| TTTGCTTGATGGAACCAAAT+TGG | - | chr1.3:4892887-4892906 | MS.gene051678:intron | 35.0% | |
| ! | AAAAAGCATGCAAAGGATAG+TGG | + | chr1.3:4895314-4895333 | None:intergenic | 35.0% |
| ! | AACTATAGTGAAGTATCAGG+TGG | - | chr1.3:4894078-4894097 | MS.gene051678:intron | 35.0% |
| ! | AATCACCTCTTCAGTTTGTT+AGG | + | chr1.3:4896980-4896999 | None:intergenic | 35.0% |
| ! | ATACATCCCGATTATGCTTT+TGG | - | chr1.3:4895474-4895493 | MS.gene051678:intron | 35.0% |
| ! | ATCGGGATGTATACTGATTA+TGG | + | chr1.3:4895466-4895485 | None:intergenic | 35.0% |
| ! | CAAGCTTTATAAACACCACA+TGG | - | chr1.3:4897710-4897729 | MS.gene051678:intron | 35.0% |
| ! | CTCATCGGTTACAAATTTCA+AGG | + | chr1.3:4895264-4895283 | None:intergenic | 35.0% |
| ! | GCAAAAGCATATATAGAGAC+AGG | - | chr1.3:4897318-4897337 | MS.gene051678:intron | 35.0% |
| ! | GTCATAGTCATGATCACTTT+TGG | + | chr1.3:4894300-4894319 | None:intergenic | 35.0% |
| ! | TAATTCTTTTGCTTCCCACA+TGG | - | chr1.3:4893924-4893943 | MS.gene051678:intron | 35.0% |
| ! | TATTTGAGATATTGGACCGT+AGG | + | chr1.3:4894443-4894462 | None:intergenic | 35.0% |
| ! | TGCAACTATAGTGAAGTATC+AGG | - | chr1.3:4894075-4894094 | MS.gene051678:intron | 35.0% |
| ! | TTTTCAATGGCGAAAATGCT+CGG | + | chr1.3:4895669-4895688 | None:intergenic | 35.0% |
| !! | AACCGTGATTTGTTCATCAT+CGG | - | chr1.3:4893411-4893430 | MS.gene051678:intron | 35.0% |
| !! | ACAGATCGGCTTTTCAAATT+TGG | + | chr1.3:4896771-4896790 | None:intergenic | 35.0% |
| !! | ATGATCACTTTTGGCAATCT+AGG | + | chr1.3:4894291-4894310 | None:intergenic | 35.0% |
| !! | CAGATCGGCTTTTCAAATTT+GGG | + | chr1.3:4896770-4896789 | None:intergenic | 35.0% |
| !! | CCTATTTTATTTCACCGAAC+GGG | - | chr1.3:4894197-4894216 | MS.gene051678:CDS | 35.0% |
| !! | CTATTTTATTTCACCGAACG+GGG | - | chr1.3:4894198-4894217 | MS.gene051678:CDS | 35.0% |
| !! | GTTCATTTTAGCATACCTAG+TGG | - | chr1.3:4894889-4894908 | MS.gene051678:intron | 35.0% |
| !!! | CATCCTTTGAGCTAGTTTTT+GGG | - | chr1.3:4893255-4893274 | MS.gene051678:intron | 35.0% |
| !!! | GTTTTGATTGATAGTGAGCT+TGG | - | chr1.3:4893462-4893481 | MS.gene051678:intron | 35.0% |
| !!! | TCATCCTTTGAGCTAGTTTT+TGG | - | chr1.3:4893254-4893273 | MS.gene051678:intron | 35.0% |
| AAAATCAGCAGCCTGAGAAA+TGG | + | chr1.3:4896375-4896394 | None:intergenic | 40.0% | |
| AAACCCATACAATCGTCTTC+AGG | + | chr1.3:4896682-4896701 | None:intergenic | 40.0% | |
| AAATCAGCAGCCTGAGAAAT+GGG | + | chr1.3:4896374-4896393 | None:intergenic | 40.0% | |
| AAATGTTACTGGTGACTCCA+TGG | - | chr1.3:4894604-4894623 | MS.gene051678:intron | 40.0% | |
| AACATGATCGTTGAAGTTGG+GGG | + | chr1.3:4892746-4892765 | None:intergenic | 40.0% | |
| AACCAAATTGGGTTCTGCTA+GGG | - | chr1.3:4892899-4892918 | MS.gene051678:intron | 40.0% | |
| AAGCTTCTCAAAATCGGACA+CGG | - | chr1.3:4892712-4892731 | MS.gene051678:intron | 40.0% | |
| AAGGACTTCATCAAGATCAC+CGG | + | chr1.3:4893880-4893899 | None:intergenic | 40.0% | |
| AAGGTTGAGAAAGAAGAGGA+TGG | - | chr1.3:4897997-4898016 | MS.gene051678:CDS | 40.0% | |
| AATCGTTGAGAGTTTCATGC+TGG | - | chr1.3:4896441-4896460 | MS.gene051678:intron | 40.0% | |
| ACATTACCTTCTGTTGTGTC+TGG | - | chr1.3:4893720-4893739 | MS.gene051678:intron | 40.0% | |
| ACCCAAATACCACAATTAGG+CGG | - | chr1.3:4897812-4897831 | MS.gene051678:intron | 40.0% | |
| ACTATGCCAAATGAGTCGAT+TGG | + | chr1.3:4896541-4896560 | None:intergenic | 40.0% | |
| AGACATCAAGAAAGCTCTTG+AGG | - | chr1.3:4897362-4897381 | MS.gene051678:intron | 40.0% | |
| AGGTGAATTGTATGCTGGAT+TGG | - | chr1.3:4893653-4893672 | MS.gene051678:intron | 40.0% | |
| AGGTGAATTGTTTGTGGTTC+AGG | - | chr1.3:4893599-4893618 | MS.gene051678:intron | 40.0% | |
| AGGTTGAGAAAGAAGAGGAT+GGG | - | chr1.3:4897998-4898017 | MS.gene051678:CDS | 40.0% | |
| ATGACATTAGAGTCGGGTTA+AGG | - | chr1.3:4893301-4893320 | MS.gene051678:CDS | 40.0% | |
| ATGGGTCATATCAAGCAATG+AGG | - | chr1.3:4897729-4897748 | MS.gene051678:CDS | 40.0% | |
| ATTGCTTGATATGACCCATG+TGG | + | chr1.3:4897728-4897747 | None:intergenic | 40.0% | |
| CAACAATGAAGAAGGGTGAA+AGG | - | chr1.3:4895439-4895458 | MS.gene051678:CDS | 40.0% | |
| CAATCAAAACACACGCTTAG+AGG | + | chr1.3:4893452-4893471 | None:intergenic | 40.0% | |
| CACTGGTGCAAAAGAGTAAA+TGG | - | chr1.3:4897116-4897135 | MS.gene051678:intron | 40.0% | |
| CCAGTGGCTTATAATATTGC+AGG | + | chr1.3:4897102-4897121 | None:intergenic | 40.0% | |
| CCATTGAAAATTGCAAGGGT+GGG | - | chr1.3:4895679-4895698 | MS.gene051678:intron | 40.0% | |
| CCTGCAATATTATAAGCCAC+TGG | - | chr1.3:4897099-4897118 | MS.gene051678:intron | 40.0% | |
| CGAACTCAACCTTACAAAAC+CGG | - | chr1.3:4897667-4897686 | MS.gene051678:intron | 40.0% | |
| CGAATCCATACATTGCACTA+AGG | - | chr1.3:4893579-4893598 | MS.gene051678:intron | 40.0% | |
| CGCTACTAAACCTTACAGAT+CGG | + | chr1.3:4896785-4896804 | None:intergenic | 40.0% | |
| GCACTAAGGTGAATTGTTTG+TGG | - | chr1.3:4893593-4893612 | MS.gene051678:intron | 40.0% | |
| GGCACTGTATTCGAAAAAAG+AGG | - | chr1.3:4895221-4895240 | MS.gene051678:CDS | 40.0% | |
| GTAAAAGAGGGAAAGGAAGA+AGG | - | chr1.3:4895129-4895148 | MS.gene051678:CDS | 40.0% | |
| GTACATAGTTTGATTGCTCC+AGG | + | chr1.3:4896506-4896525 | None:intergenic | 40.0% | |
| GTGATAGGTGAATTGTATGC+TGG | - | chr1.3:4893648-4893667 | MS.gene051678:intron | 40.0% | |
| GTGATCATGACTATGACAAG+GGG | - | chr1.3:4894303-4894322 | MS.gene051678:intron | 40.0% | |
| GTGCAACTTAACAGTGTAAC+CGG | + | chr1.3:4894176-4894195 | None:intergenic | 40.0% | |
| GTTAGCAGAGATGGATCTTT+AGG | - | chr1.3:4896395-4896414 | MS.gene051678:intron | 40.0% | |
| TAACAATATCGGGCTCATTG+AGG | - | chr1.3:4893177-4893196 | MS.gene051678:intron | 40.0% | |
| TACACAGCTATGCTAGAAGA+TGG | - | chr1.3:4895200-4895219 | MS.gene051678:CDS | 40.0% | |
| TAGAATTCAACTCCTCCTTC+CGG | + | chr1.3:4894136-4894155 | None:intergenic | 40.0% | |
| TAGCAGAGATGGATCTTTAG+GGG | - | chr1.3:4896397-4896416 | MS.gene051678:intron | 40.0% | |
| TAGTGCAATGTATGGATTCG+CGG | + | chr1.3:4893579-4893598 | None:intergenic | 40.0% | |
| TCACCCAAAAACTAGCTCAA+AGG | + | chr1.3:4893261-4893280 | None:intergenic | 40.0% | |
| TGGGTCATATCAAGCAATGA+GGG | - | chr1.3:4897730-4897749 | MS.gene051678:CDS | 40.0% | |
| TGGTGTATGTAGATGCCTTT+GGG | - | chr1.3:4894486-4894505 | MS.gene051678:CDS | 40.0% | |
| TGTCCAAGAGAAAATGTGAC+AGG | + | chr1.3:4892936-4892955 | None:intergenic | 40.0% | |
| TGTTCTCAAGCAGAGATTGA+AGG | - | chr1.3:4897978-4897997 | MS.gene051678:CDS | 40.0% | |
| TTCCATGATACCCATTTCTC+AGG | - | chr1.3:4896361-4896380 | MS.gene051678:CDS | 40.0% | |
| TTGAGTCTGGTGGAATTGAA+CGG | + | chr1.3:4894541-4894560 | None:intergenic | 40.0% | |
| ! | AAACAGCCAATCGACTCATT+TGG | - | chr1.3:4896532-4896551 | MS.gene051678:CDS | 40.0% |
| ! | AATGAGGGTGCAAATGTTAC+GGG | - | chr1.3:4894671-4894690 | MS.gene051678:intron | 40.0% |
| ! | ACAACAAGTCTTTTCCCACT+AGG | + | chr1.3:4894907-4894926 | None:intergenic | 40.0% |
| ! | ACGAATTGTCAAATGGGCTT+TGG | + | chr1.3:4893356-4893375 | None:intergenic | 40.0% |
| ! | AGAGTTTCATGCTGGTTGAA+CGG | - | chr1.3:4896449-4896468 | MS.gene051678:intron | 40.0% |
| ! | AGCAGCGAAGAAGTATGATA+AGG | - | chr1.3:4896264-4896283 | MS.gene051678:intron | 40.0% |
| ! | AGCGAAGAAGTATGATAAGG+TGG | - | chr1.3:4896267-4896286 | MS.gene051678:intron | 40.0% |
| ! | ATCCAACACAATGAAGGTGT+TGG | - | chr1.3:4897772-4897791 | MS.gene051678:CDS | 40.0% |
| ! | CAATGAGGGTGCAAATGTTA+CGG | - | chr1.3:4894670-4894689 | MS.gene051678:intron | 40.0% |
| ! | CATTTACTCTTTTGCACCAG+TGG | + | chr1.3:4897118-4897137 | None:intergenic | 40.0% |
| ! | CCCGTTCGGTGAAATAAAAT+AGG | + | chr1.3:4894200-4894219 | None:intergenic | 40.0% |
| ! | CTTTGAGGAATTGGAGATCT+AGG | - | chr1.3:4895612-4895631 | MS.gene051678:intron | 40.0% |
| ! | GATTTTATGTGGGTGTCCTT+TGG | - | chr1.3:4893036-4893055 | MS.gene051678:intron | 40.0% |
| ! | GTCACATTTTCTCTTGGACA+AGG | - | chr1.3:4892936-4892955 | MS.gene051678:intron | 40.0% |
| ! | GTTTATACTGGACTCTGAGA+TGG | + | chr1.3:4896901-4896920 | None:intergenic | 40.0% |
| ! | TCTCCTGTCACATTTTCTCT+TGG | - | chr1.3:4892930-4892949 | MS.gene051678:intron | 40.0% |
| ! | TGGGGTAAAAAAGCATGCAA+AGG | + | chr1.3:4895321-4895340 | None:intergenic | 40.0% |
| ! | TGGTTTTTCATTTTCCAGGG+AGG | - | chr1.3:4897474-4897493 | MS.gene051678:intron | 40.0% |
| ! | TTCATTTTCCAGGGAGGTAA+AGG | - | chr1.3:4897480-4897499 | MS.gene051678:intron | 40.0% |
| ! | TTGTATGCTGGATTGGATGA+TGG | - | chr1.3:4893660-4893679 | MS.gene051678:intron | 40.0% |
| !! | AATCTCAACTTGTTGCCATG+TGG | + | chr1.3:4893942-4893961 | None:intergenic | 40.0% |
| !! | ATCTCAACTTGTTGCCATGT+GGG | + | chr1.3:4893941-4893960 | None:intergenic | 40.0% |
| !! | ATTCATAGGAGAAAGCACCA+TGG | - | chr1.3:4896155-4896174 | MS.gene051678:CDS | 40.0% |
| !! | GCTGATTTTGTTAGCAGAGA+TGG | - | chr1.3:4896386-4896405 | MS.gene051678:CDS | 40.0% |
| !! | TCAAACCCTTGATAACGTGA+CGG | - | chr1.3:4894830-4894849 | MS.gene051678:intron | 40.0% |
| !! | TCATACACTACTTTTGAGCC+TGG | + | chr1.3:4895537-4895556 | None:intergenic | 40.0% |
| !! | TTAACATGGAGCATTGAGTC+TGG | + | chr1.3:4894554-4894573 | None:intergenic | 40.0% |
| !! | TTCATAGGAGAAAGCACCAT+GGG | - | chr1.3:4896156-4896175 | MS.gene051678:CDS | 40.0% |
| !!! | TGTTGCTGCTTTTGTCGAAA+AGG | - | chr1.3:4894924-4894943 | MS.gene051678:intron | 40.0% |
| AAAAAATTGAGGTGGCTGGG+AGG | - | chr1.3:4896194-4896213 | MS.gene051678:intron | 45.0% | |
| AAGCAGCTGATAGACTACCA+AGG | + | chr1.3:4893899-4893918 | None:intergenic | 45.0% | |
| AATACCACAATTAGGCGGCT+AGG | - | chr1.3:4897817-4897836 | MS.gene051678:intron | 45.0% | |
| ACAAGAGAACCTTGGCAATG+TGG | + | chr1.3:4893097-4893116 | None:intergenic | 45.0% | |
| AGCAGTGGCAACAATGAAGA+AGG | - | chr1.3:4895431-4895450 | MS.gene051678:CDS | 45.0% | |
| AGCATAGCTGTGTATCTGAC+TGG | + | chr1.3:4895194-4895213 | None:intergenic | 45.0% | |
| AGCCGCCTAATTGTGGTATT+TGG | + | chr1.3:4897817-4897836 | None:intergenic | 45.0% | |
| AGCCTGAGAAATGGGTATCA+TGG | + | chr1.3:4896366-4896385 | None:intergenic | 45.0% | |
| AGGACTTCATCAAGATCACC+GGG | + | chr1.3:4893879-4893898 | None:intergenic | 45.0% | |
| AGGAGCCACTGTTTACTGAT+TGG | - | chr1.3:4895149-4895168 | MS.gene051678:CDS | 45.0% | |
| ATACCACAATTAGGCGGCTA+GGG | - | chr1.3:4897818-4897837 | MS.gene051678:intron | 45.0% | |
| ATCCCTAGCAGAACCCAATT+TGG | + | chr1.3:4892904-4892923 | None:intergenic | 45.0% | |
| ATGCTTCCAGACACAACAGA+AGG | + | chr1.3:4893729-4893748 | None:intergenic | 45.0% | |
| CAACTCGGTTGTGCAATTTG+AGG | - | chr1.3:4893761-4893780 | MS.gene051678:intron | 45.0% | |
| CAAGAGAACCTTGGCAATGT+GGG | + | chr1.3:4893096-4893115 | None:intergenic | 45.0% | |
| CACTGTTGTTGCAGAAACTC+CGG | - | chr1.3:4894114-4894133 | MS.gene051678:intron | 45.0% | |
| CATACCAGACCAGAAGACTT+CGG | + | chr1.3:4897006-4897025 | None:intergenic | 45.0% | |
| CATCAAGAAAGCTCTTGAGG+TGG | - | chr1.3:4897365-4897384 | MS.gene051678:intron | 45.0% | |
| CATTAGAGTCGGGTTAAGGA+TGG | - | chr1.3:4893305-4893324 | MS.gene051678:CDS | 45.0% | |
| CATTCCACAAGACTCCAACT+CGG | - | chr1.3:4893746-4893765 | MS.gene051678:intron | 45.0% | |
| CGTAACATTTGCACCCTCAT+TGG | + | chr1.3:4894672-4894691 | None:intergenic | 45.0% | |
| CTCAAATTGCACAACCGAGT+TGG | + | chr1.3:4893763-4893782 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr1.3:4897777-4897796 | None:intergenic | 45.0% | |
| CTTTAGTACCTTTACCTCCC+TGG | + | chr1.3:4897491-4897510 | None:intergenic | 45.0% | |
| GAACCAAATTGGGTTCTGCT+AGG | - | chr1.3:4892898-4892917 | MS.gene051678:intron | 45.0% | |
| GAGCCTGAAGACGATTGTAT+GGG | - | chr1.3:4896676-4896695 | MS.gene051678:intron | 45.0% | |
| GATGAACTGGATGAAGAACC+AGG | - | chr1.3:4892613-4892632 | MS.gene051678:CDS | 45.0% | |
| GCAGTGGCAACAATGAAGAA+GGG | - | chr1.3:4895432-4895451 | MS.gene051678:CDS | 45.0% | |
| GCCATTGAAAATTGCAAGGG+TGG | - | chr1.3:4895678-4895697 | MS.gene051678:intron | 45.0% | |
| GCCGCCTAATTGTGGTATTT+GGG | + | chr1.3:4897816-4897835 | None:intergenic | 45.0% | |
| GGAACTCGTTTCTTGGATCA+CGG | - | chr1.3:4893785-4893804 | MS.gene051678:intron | 45.0% | |
| GGAATCGTCACCATGAAGAA+AGG | - | chr1.3:4893681-4893700 | MS.gene051678:intron | 45.0% | |
| GGGGTGGTGAAAATGGAAAT+GGG | - | chr1.3:4898018-4898037 | MS.gene051678:CDS | 45.0% | |
| GGGTTAAGTAGAAGAACGAG+AGG | + | chr1.3:4894366-4894385 | None:intergenic | 45.0% | |
| GGTGATCTTGATGAAGTCCT+TGG | - | chr1.3:4893879-4893898 | MS.gene051678:intron | 45.0% | |
| GGTGTATGTAGATGCCTTTG+GGG | - | chr1.3:4894487-4894506 | MS.gene051678:CDS | 45.0% | |
| GGTTGAGAAAGAAGAGGATG+GGG | - | chr1.3:4897999-4898018 | MS.gene051678:CDS | 45.0% | |
| GTGATTGAACCGAAGTCTTC+TGG | - | chr1.3:4896994-4897013 | MS.gene051678:CDS | 45.0% | |
| GTGGATGTTTGCAAAGATGG+TGG | - | chr1.3:4893810-4893829 | MS.gene051678:intron | 45.0% | |
| GTGGTGTATGTAGATGCCTT+TGG | - | chr1.3:4894485-4894504 | MS.gene051678:CDS | 45.0% | |
| TACCTCCCTGTGTTAGGATT+GGG | + | chr1.3:4893146-4893165 | None:intergenic | 45.0% | |
| TATCAGGTGGCACTTGAAGA+TGG | - | chr1.3:4894091-4894110 | MS.gene051678:intron | 45.0% | |
| TCTCAAAATCGGACACGGTT+GGG | - | chr1.3:4892717-4892736 | MS.gene051678:intron | 45.0% | |
| TCTTCATTGTTGCCACTGCT+CGG | + | chr1.3:4895431-4895450 | None:intergenic | 45.0% | |
| TGGGATCTTAGATGCATCAG+TGG | + | chr1.3:4896842-4896861 | None:intergenic | 45.0% | |
| TGGGGTGGTGAAAATGGAAA+TGG | - | chr1.3:4898017-4898036 | MS.gene051678:CDS | 45.0% | |
| TTCTCAAAATCGGACACGGT+TGG | - | chr1.3:4892716-4892735 | MS.gene051678:intron | 45.0% | |
| TTGAGGTGGAACTCGTTTCT+TGG | - | chr1.3:4893778-4893797 | MS.gene051678:intron | 45.0% | |
| TTGAGGTGGATCCACAAAAC+AGG | - | chr1.3:4897379-4897398 | MS.gene051678:intron | 45.0% | |
| TTGTGTTGGATGTTAAGGGG+TGG | + | chr1.3:4897763-4897782 | None:intergenic | 45.0% | |
| ! | ACGGTGTGTCTCCGTAATTT+TGG | + | chr1.3:4893540-4893559 | None:intergenic | 45.0% |
| ! | CCCACCCTTGCAATTTTCAA+TGG | + | chr1.3:4895682-4895701 | None:intergenic | 45.0% |
| ! | GCTTTGGATCTCACTCTCAA+AGG | + | chr1.3:4893340-4893359 | None:intergenic | 45.0% |
| ! | TCCAATTCCTCAAAGCACCA+AGG | + | chr1.3:4895607-4895626 | None:intergenic | 45.0% |
| ! | TGGATCTTTAGGGGATGATG+AGG | - | chr1.3:4896406-4896425 | MS.gene051678:intron | 45.0% |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | - | chr1.3:4897682-4897701 | MS.gene051678:intron | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr1.3:4897775-4897794 | MS.gene051678:CDS | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1.3:4897676-4897695 | MS.gene051678:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1.3:4897679-4897698 | None:intergenic | 45.0% |
| !! | GTGGTGGATGTTTGCAAAGA+TGG | - | chr1.3:4893807-4893826 | MS.gene051678:intron | 45.0% |
| !! | TACACTACTTTTGAGCCTGG+TGG | + | chr1.3:4895534-4895553 | None:intergenic | 45.0% |
| !! | TCCTTGGTGCTTTGAGGAAT+TGG | - | chr1.3:4895603-4895622 | MS.gene051678:intron | 45.0% |
| !!! | ATTACATTTATTATTATTTT+AGG | - | chr1.3:4897209-4897228 | MS.gene051678:intron | 5.0% |
| ACTCGTTTCTTGGATCACGG+TGG | - | chr1.3:4893788-4893807 | MS.gene051678:intron | 50.0% | |
| AGAGGATGGGGTGGTGAAAA+TGG | - | chr1.3:4898011-4898030 | MS.gene051678:CDS | 50.0% | |
| AGCTGTGTATCTGACTGGCA+TGG | + | chr1.3:4895189-4895208 | None:intergenic | 50.0% | |
| AGTCACTACCTCCCTGTGTT+AGG | + | chr1.3:4893152-4893171 | None:intergenic | 50.0% | |
| CACCATGAAGAAAGGAGAGG+TGG | - | chr1.3:4893689-4893708 | MS.gene051678:intron | 50.0% | |
| CCCAAGCACACACTCGTTAA+GGG | + | chr1.3:4893229-4893248 | None:intergenic | 50.0% | |
| CCCTTAACGAGTGTGTGCTT+GGG | - | chr1.3:4893226-4893245 | MS.gene051678:intron | 50.0% | |
| CGAAGTCTTCTGGTCTGGTA+TGG | - | chr1.3:4897004-4897023 | MS.gene051678:CDS | 50.0% | |
| CGAGCCTGAAGACGATTGTA+TGG | - | chr1.3:4896675-4896694 | MS.gene051678:intron | 50.0% | |
| CGTCACCATGAAGAAAGGAG+AGG | - | chr1.3:4893686-4893705 | MS.gene051678:intron | 50.0% | |
| CTACCTCCCTGTGTTAGGAT+TGG | + | chr1.3:4893147-4893166 | None:intergenic | 50.0% | |
| CTCAAAAGCTCGGCGAAGAA+AGG | - | chr1.3:4892659-4892678 | MS.gene051678:CDS | 50.0% | |
| CTCGGTTGTGCAATTTGAGG+TGG | - | chr1.3:4893764-4893783 | MS.gene051678:intron | 50.0% | |
| CTTCTTCTTGATCGGCGAGT+TGG | + | chr1.3:4892695-4892714 | None:intergenic | 50.0% | |
| GCTGGGAGGAAGAAAGAAGA+AGG | - | chr1.3:4896208-4896227 | MS.gene051678:intron | 50.0% | |
| GGTGCTTTCACAGCCAATGA+GGG | - | chr1.3:4894656-4894675 | MS.gene051678:intron | 50.0% | |
| GTTGTTGCAGAAACTCCGGA+AGG | - | chr1.3:4894118-4894137 | MS.gene051678:intron | 50.0% | |
| TACCCAATCCTAACACAGGG+AGG | - | chr1.3:4893141-4893160 | MS.gene051678:CDS | 50.0% | |
| TCAGCACCACCTCAAAAGCT+CGG | - | chr1.3:4892649-4892668 | MS.gene051678:CDS | 50.0% | |
| TCCCTTAACGAGTGTGTGCT+TGG | - | chr1.3:4893225-4893244 | MS.gene051678:intron | 50.0% | |
| TCGGGCTCATTGAGGCTAAT+TGG | - | chr1.3:4893185-4893204 | MS.gene051678:intron | 50.0% | |
| TGAACCGAAGTCTTCTGGTC+TGG | - | chr1.3:4896999-4897018 | MS.gene051678:CDS | 50.0% | |
| TGAGAAAGAAGAGGATGGGG+TGG | - | chr1.3:4898002-4898021 | MS.gene051678:CDS | 50.0% | |
| TGCCACCTCTCCTTTCTTCA+TGG | + | chr1.3:4893694-4893713 | None:intergenic | 50.0% | |
| TGGCAATTCCGCCTTCATTG+CGG | + | chr1.3:4897849-4897868 | None:intergenic | 50.0% | |
| ! | ACAACCGAGTTGGAGTCTTG+TGG | + | chr1.3:4893753-4893772 | None:intergenic | 50.0% |
| ! | CTTTCTTCGCCGAGCTTTTG+AGG | + | chr1.3:4892661-4892680 | None:intergenic | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr1.3:4897787-4897806 | MS.gene051678:CDS | 50.0% |
| ! | GTAGATGCCTTTGGGGAGAA+GGG | - | chr1.3:4894494-4894513 | MS.gene051678:CDS | 50.0% |
| ! | TAGATGCCTTTGGGGAGAAG+GGG | - | chr1.3:4894495-4894514 | MS.gene051678:CDS | 50.0% |
| ! | TCCTCAAAGCACCAAGGAAG+AGG | + | chr1.3:4895601-4895620 | None:intergenic | 50.0% |
| ! | TGTAGATGCCTTTGGGGAGA+AGG | - | chr1.3:4894493-4894512 | MS.gene051678:CDS | 50.0% |
| !! | ACATGGAGCATTGAGTCTGG+TGG | + | chr1.3:4894551-4894570 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1.3:4897681-4897700 | MS.gene051678:intron | 50.0% |
| !! | GATCTTGCTATTGTGCCACC+AGG | - | chr1.3:4895516-4895535 | MS.gene051678:intron | 50.0% |
| !! | TACTGGTTTAGACCGAGCAG+TGG | - | chr1.3:4895416-4895435 | MS.gene051678:CDS | 50.0% |
| !! | TCCTCTTCCTTGGTGCTTTG+AGG | - | chr1.3:4895597-4895616 | MS.gene051678:intron | 50.0% |
| ATCGGAGTCCCACATTGCCA+AGG | - | chr1.3:4893085-4893104 | MS.gene051678:intron | 55.0% | |
| CACAATTAGGCGGCTAGGGA+CGG | - | chr1.3:4897822-4897841 | MS.gene051678:intron | 55.0% | |
| CGTTTCTTGGATCACGGTGG+TGG | - | chr1.3:4893791-4893810 | MS.gene051678:intron | 55.0% | |
| GCAACCCTCACCTTACAAGC+CGG | + | chr1.3:4897689-4897708 | None:intergenic | 55.0% | |
| GCCCAAGCACACACTCGTTA+AGG | + | chr1.3:4893230-4893249 | None:intergenic | 55.0% | |
| GGGAAAGGGAATGATCGACC+CGG | - | chr1.3:4893858-4893877 | MS.gene051678:intron | 55.0% | |
| GGGTGCTTTCACAGCCAATG+AGG | - | chr1.3:4894655-4894674 | MS.gene051678:intron | 55.0% | |
| GTATGGATTCGCGGTGAGCT+CGG | + | chr1.3:4893570-4893589 | None:intergenic | 55.0% | |
| GTTGCAGAAACTCCGGAAGG+AGG | - | chr1.3:4894121-4894140 | MS.gene051678:intron | 55.0% | |
| TTCACTCCCCTTCTCCCCAA+AGG | + | chr1.3:4894504-4894523 | None:intergenic | 55.0% | |
| ! | AGAACGAGAGGCGTACACTG+AGG | + | chr1.3:4894354-4894373 | None:intergenic | 55.0% |
| !! | GCTGATTCGATGACTTCGCC+TGG | + | chr1.3:4892634-4892653 | None:intergenic | 55.0% |
| !! | TCTTCGCCGAGCTTTTGAGG+TGG | + | chr1.3:4892658-4892677 | None:intergenic | 55.0% |
| AAGGGGAGTGAAGCTGGCAG+CGG | - | chr1.3:4894512-4894531 | MS.gene051678:intron | 60.0% | |
| AGCGCAGCTCCTTCTGATGG+CGG | - | chr1.3:4898054-4898073 | MS.gene051678:CDS | 60.0% | |
| CGGTGAGCTCGGCAGATTCA+CGG | + | chr1.3:4893559-4893578 | None:intergenic | 60.0% | |
| CGTCCCTAGCCGCCTAATTG+TGG | + | chr1.3:4897824-4897843 | None:intergenic | 60.0% | |
| CTAGGGACGGACCGCAATGA+AGG | - | chr1.3:4897835-4897854 | MS.gene051678:intron | 60.0% | |
| GACAGCGCAGCTCCTTCTGA+TGG | - | chr1.3:4898051-4898070 | MS.gene051678:CDS | 60.0% | |
| AGGGGAGTGAAGCTGGCAGC+GGG | - | chr1.3:4894513-4894532 | MS.gene051678:intron | 65.0% | |
| GGGACGGACCGCAATGAAGG+CGG | - | chr1.3:4897838-4897857 | MS.gene051678:intron | 65.0% | |
| GGGGAGAAGGGGAGTGAAGC+TGG | - | chr1.3:4894506-4894525 | MS.gene051678:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 4892586 | 4898098 | 4892586 | ID=MS.gene051678 |
| chr1.3 | mRNA | 4892586 | 4898098 | 4892586 | ID=MS.gene051678.t1;Parent=MS.gene051678 |
| chr1.3 | exon | 4897915 | 4898098 | 4897915 | ID=MS.gene051678.t1.exon1;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4897915 | 4898098 | 4897915 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4897727 | 4897813 | 4897727 | ID=MS.gene051678.t1.exon2;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4897727 | 4897813 | 4897727 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4896784 | 4897029 | 4896784 | ID=MS.gene051678.t1.exon3;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4896784 | 4897029 | 4896784 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4896518 | 4896598 | 4896518 | ID=MS.gene051678.t1.exon4;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4896518 | 4896598 | 4896518 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4896327 | 4896407 | 4896327 | ID=MS.gene051678.t1.exon5;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4896327 | 4896407 | 4896327 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4895992 | 4896186 | 4895992 | ID=MS.gene051678.t1.exon6;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4895992 | 4896186 | 4895992 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4895400 | 4895489 | 4895400 | ID=MS.gene051678.t1.exon7;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4895400 | 4895489 | 4895400 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4895103 | 4895278 | 4895103 | ID=MS.gene051678.t1.exon8;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4895103 | 4895278 | 4895103 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4894399 | 4894521 | 4894399 | ID=MS.gene051678.t1.exon9;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4894399 | 4894521 | 4894399 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4894155 | 4894301 | 4894155 | ID=MS.gene051678.t1.exon10;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4894155 | 4894301 | 4894155 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4893284 | 4893411 | 4893284 | ID=MS.gene051678.t1.exon11;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4893284 | 4893411 | 4893284 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4893093 | 4893192 | 4893093 | ID=MS.gene051678.t1.exon12;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4893093 | 4893192 | 4893093 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| chr1.3 | exon | 4892586 | 4892693 | 4892586 | ID=MS.gene051678.t1.exon13;Parent=MS.gene051678.t1 |
| chr1.3 | CDS | 4892586 | 4892693 | 4892586 | ID=cds.MS.gene051678.t1;Parent=MS.gene051678.t1 |
| Gene Sequence |
| Protein sequence |
