Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51638.t1 | RHN65424.1 | 91.8 | 760 | 55 | 4 | 1 | 756 | 1 | 757 | 0.00E+00 | 1189.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51638.t1 | P0CB21 | 28.0 | 728 | 377 | 30 | 55 | 755 | 81 | 688 | 4.3e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51638.t1 | A0A072USW7 | 91.8 | 760 | 55 | 4 | 1 | 756 | 1 | 757 | 0.0e+00 | 1189.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050361 | MS.gene51638 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene51638 | 0.809083 | 2.26E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene51638 | 0.802301 | 5.99E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene51638 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene057855 | MS.gene51638 | 0.821554 | 3.80E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene51638 | 0.815547 | 8.74E-52 | -1.69E-46 |
| MS.gene060679 | MS.gene51638 | 0.812956 | 3.27E-51 | -1.69E-46 |
| MS.gene060680 | MS.gene51638 | 0.810434 | 1.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51638.t1 | MTR_3g009540 | 90.025 | 792 | 52 | 6 | 1 | 787 | 1 | 770 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51638.t1 | AT4G26450 | 29.095 | 818 | 391 | 36 | 10 | 787 | 36 | 704 | 5.42e-34 | 139 |
| MS.gene51638.t1 | AT4G26450 | 29.095 | 818 | 391 | 36 | 10 | 787 | 36 | 704 | 5.42e-34 | 139 |
Find 224 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACAGCTTCCTTTATTTC+AGG | 0.169218 | 3.4:-4626896 | None:intergenic |
| AATATAGGGTTTGAAGAGTT+TGG | 0.241729 | 3.4:+4625468 | MS.gene51638:CDS |
| GGTGGTGGTGGTGATGGTTT+TGG | 0.252161 | 3.4:+4625087 | MS.gene51638:CDS |
| GGTGTTGGTGGTGTTGGTAT+TGG | 0.257243 | 3.4:+4625339 | MS.gene51638:CDS |
| GGGGAAATTGGGGTGGATGG+GGG | 0.268503 | 3.4:+4625369 | MS.gene51638:CDS |
| TGCTGAGTATTTAGTTTCTC+AGG | 0.274866 | 3.4:+4625221 | MS.gene51638:CDS |
| GGGAAATTGGGGTGGATGGG+GGG | 0.292362 | 3.4:+4625370 | MS.gene51638:CDS |
| AATACTGTGCATGATGAAAT+AGG | 0.295550 | 3.4:+4627795 | MS.gene51638:CDS |
| ACGATTCGGTCTTTGGTATA+GGG | 0.297677 | 3.4:-4626595 | None:intergenic |
| GAGGTGGTTCTTCGGATATT+AGG | 0.298644 | 3.4:+4625592 | MS.gene51638:CDS |
| TGGTCAAGATACAGCTTATA+TGG | 0.301920 | 3.4:+4626421 | MS.gene51638:CDS |
| AAATTGTATAATAATCAAAA+TGG | 0.309718 | 3.4:+4625273 | MS.gene51638:CDS |
| GAATTGAAACAAAGTTCTTC+TGG | 0.309742 | 3.4:+4625861 | MS.gene51638:CDS |
| TTGTCTGGGAGGAGGAATAT+AGG | 0.313319 | 3.4:+4625453 | MS.gene51638:CDS |
| GTTGTTGGTGGTGTTGGTAT+TGG | 0.333880 | 3.4:+4625318 | MS.gene51638:CDS |
| GGGCTATCTTTCACCTCAAT+TGG | 0.334175 | 3.4:-4626635 | None:intergenic |
| TATGAGTGGCGGTGAAGTTA+AGG | 0.336992 | 3.4:+4625947 | MS.gene51638:CDS |
| TTCTCCCAGTGACATATATA+TGG | 0.337054 | 3.4:-4628058 | None:intergenic |
| CACTCCTGTCCCTGAAATAA+AGG | 0.341151 | 3.4:+4626886 | MS.gene51638:CDS |
| TACGATTCGGTCTTTGGTAT+AGG | 0.344516 | 3.4:-4626596 | None:intergenic |
| GTGTTGGTATTGGTGGTGTG+GGG | 0.354718 | 3.4:+4625349 | MS.gene51638:CDS |
| TGTCTGGGAGGAGGAATATA+GGG | 0.357204 | 3.4:+4625454 | MS.gene51638:CDS |
| TAATAGTAATGGATTTGATT+GGG | 0.357251 | 3.4:+4625524 | MS.gene51638:CDS |
| GAGGAGGTTGAGGTTGTTGT+TGG | 0.357866 | 3.4:+4625711 | MS.gene51638:CDS |
| ACTGCAGAATTACCAGAGTT+TGG | 0.358138 | 3.4:+4626464 | MS.gene51638:CDS |
| AGGTGGTTCTTCGGATATTA+GGG | 0.360323 | 3.4:+4625593 | MS.gene51638:CDS |
| ATTGAAATTTCATGTTCCTC+TGG | 0.361203 | 3.4:-4626656 | None:intergenic |
| TGATGATGATATGAAAGAAT+TGG | 0.364274 | 3.4:+4626352 | MS.gene51638:CDS |
| TGGTGTTGGTATTGGTGGTG+TGG | 0.365883 | 3.4:+4625347 | MS.gene51638:CDS |
| CAGTTCCCTGTCTGAGGAAA+GGG | 0.368385 | 3.4:+4626493 | MS.gene51638:CDS |
| AAATGAGGATGGTAATGATT+TGG | 0.368436 | 3.4:+4625794 | MS.gene51638:CDS |
| ATCCGAAACCTGATTCTTAT+CGG | 0.368821 | 3.4:-4625826 | None:intergenic |
| AGGACAGACACTATGTTTAC+AGG | 0.372312 | 3.4:+4627651 | MS.gene51638:intron |
| CTTGGTGTTGTTGGTGGTGT+TGG | 0.372399 | 3.4:+4625312 | MS.gene51638:CDS |
| CCATGCTCCAAATGATGTTC+AGG | 0.373187 | 3.4:+4627692 | MS.gene51638:CDS |
| ACATCAGCGCTTGCGCGATT+GGG | 0.375539 | 3.4:+4625396 | MS.gene51638:CDS |
| GGTGGTGTTGGTATTGGTGT+TGG | 0.378589 | 3.4:+4625324 | MS.gene51638:CDS |
| GGTGTTGGTATTGGTGGTGT+GGG | 0.383926 | 3.4:+4625348 | MS.gene51638:CDS |
| GGTATTGGTGTTGGTGGTGT+TGG | 0.389412 | 3.4:+4625333 | MS.gene51638:CDS |
| AGTAAAAGATGCATGCAATA+TGG | 0.390026 | 3.4:+4625887 | MS.gene51638:CDS |
| TAGAAGAAGGCGGTGATGTC+AGG | 0.395450 | 3.4:+4626531 | MS.gene51638:CDS |
| ACTCATATTCTCTAAATCAT+TGG | 0.395631 | 3.4:-4625931 | None:intergenic |
| TTAATAGTAATGGATTTGAT+TGG | 0.398337 | 3.4:+4625523 | MS.gene51638:CDS |
| GTTGTTGTTGGTGGCGGTAG+TGG | 0.400898 | 3.4:+4625723 | MS.gene51638:CDS |
| CAATCTGTTGGGCCTCAATC+TGG | 0.406674 | 3.4:+4626401 | MS.gene51638:CDS |
| AACATCATTTGGAGCATGGC+TGG | 0.407421 | 3.4:-4627688 | None:intergenic |
| TCTCCATCCTGAACATCATT+TGG | 0.410143 | 3.4:-4627699 | None:intergenic |
| ACAGCTTATATGGATGATAA+AGG | 0.410182 | 3.4:+4626431 | MS.gene51638:CDS |
| GATGAAATAGGCCTTCATAA+TGG | 0.413570 | 3.4:+4627807 | MS.gene51638:CDS |
| AGTGAGTATTGCTTCTGATC+AGG | 0.414273 | 3.4:+4626694 | MS.gene51638:CDS |
| AAGAAGCATCTTGGTGTTGT+TGG | 0.415432 | 3.4:+4625303 | MS.gene51638:CDS |
| GACATCAGCGCTTGCGCGAT+TGG | 0.417100 | 3.4:+4625395 | MS.gene51638:CDS |
| GTTGTGGATGAAGGGTTGTC+TGG | 0.419510 | 3.4:+4625438 | MS.gene51638:CDS |
| AGTAGAGAGTATAGAAGGAA+TGG | 0.424853 | 3.4:+4625549 | MS.gene51638:CDS |
| TTCAGTACTCATACATCAAA+TGG | 0.425023 | 3.4:+4626965 | MS.gene51638:CDS |
| GTTGGTGGTGTTGGTATTGG+TGG | 0.426468 | 3.4:+4625342 | MS.gene51638:CDS |
| AGTATTTATGTCGTCGGGTA+CGG | 0.430013 | 3.4:-4627778 | None:intergenic |
| GTCACTATGCAACTCTGTTA+AGG | 0.432352 | 3.4:+4626094 | MS.gene51638:CDS |
| GGTTTCGGATGGTGAATTGT+TGG | 0.435738 | 3.4:+4625839 | MS.gene51638:CDS |
| GAGGTTGAGGTTGTTGTTGG+TGG | 0.436155 | 3.4:+4625714 | MS.gene51638:CDS |
| GGGGTAGTAGAGAGTATAGA+AGG | 0.440576 | 3.4:+4625544 | MS.gene51638:CDS |
| GGAGATTGAAGTAATTGATC+TGG | 0.441130 | 3.4:+4626991 | MS.gene51638:CDS |
| GCTGCCGATGCCGACGTTAC+CGG | 0.441592 | 3.4:-4625160 | None:intergenic |
| GCTGAGAATGTGTCTATTCA+AGG | 0.442727 | 3.4:+4626233 | MS.gene51638:CDS |
| CGCCATCGCGGTGGTGGTGG+TGG | 0.443031 | 3.4:+4625075 | MS.gene51638:CDS |
| GACCGATAAGAATCAGGTTT+CGG | 0.443447 | 3.4:+4625824 | MS.gene51638:CDS |
| GGTGTTGGTATTGGTGTTGG+TGG | 0.445438 | 3.4:+4625327 | MS.gene51638:CDS |
| GGATCATGGTCTGATAGGTT+TGG | 0.448922 | 3.4:+4625570 | MS.gene51638:CDS |
| TGATAATGTCACGCAGAAAT+CGG | 0.449234 | 3.4:+4625749 | MS.gene51638:CDS |
| GGAATGGATCATGGTCTGAT+AGG | 0.454804 | 3.4:+4625565 | MS.gene51638:CDS |
| TATCGCCATCGCGGTGGTGG+TGG | 0.455432 | 3.4:+4625072 | MS.gene51638:CDS |
| TTGAAATTTCATGTTCCTCT+GGG | 0.455735 | 3.4:-4626655 | None:intergenic |
| GCAGCAACAAAAGCAGGAGC+AGG | 0.456495 | 3.4:-4625138 | None:intergenic |
| ACTATGTTTACAGGCCTTGA+AGG | 0.456973 | 3.4:+4627660 | MS.gene51638:CDS |
| GATGTTGTTGATGGTGGTAT+TGG | 0.457085 | 3.4:+4625630 | MS.gene51638:CDS |
| GTTGATGGTGGTATTGGTAG+TGG | 0.457393 | 3.4:+4625636 | MS.gene51638:CDS |
| GTCGGCATCGGCAGCGGTGG+AGG | 0.457536 | 3.4:+4625168 | MS.gene51638:CDS |
| CGCTGACAAACAAGAATTCG+AGG | 0.458450 | 3.4:+4626138 | MS.gene51638:CDS |
| GACAACCCTTCATCCACAAC+TGG | 0.464301 | 3.4:-4625435 | None:intergenic |
| GTACAGCTTCCTTTATTTCA+GGG | 0.465232 | 3.4:-4626895 | None:intergenic |
| GCTTCCTTTATTTCAGGGAC+AGG | 0.466676 | 3.4:-4626890 | None:intergenic |
| GTCTATTCAAGGCTCATCCT+CGG | 0.467105 | 3.4:+4626244 | MS.gene51638:CDS |
| GTCTGCTGAGTCAAGTGATC+AGG | 0.467916 | 3.4:+4626034 | MS.gene51638:CDS |
| TGAAATAAAGGAAGCTGTAC+CGG | 0.469893 | 3.4:+4626898 | MS.gene51638:CDS |
| TAGGTTTGGAGGTGGTTCTT+CGG | 0.470962 | 3.4:+4625584 | MS.gene51638:CDS |
| CATGATATTGAGGATCTTCA+AGG | 0.471824 | 3.4:+4626197 | MS.gene51638:CDS |
| AGGTGAGACCGATAAGAATC+AGG | 0.476214 | 3.4:+4625818 | MS.gene51638:CDS |
| GAAGAGGTTATAATAATATC+CGG | 0.476293 | 3.4:+4625109 | MS.gene51638:CDS |
| TCCGAGGCGTAAAAGCCTCT+TGG | 0.478151 | 3.4:-4625048 | None:intergenic |
| TCATTACCATCCTCATTTGT+CGG | 0.478870 | 3.4:-4625789 | None:intergenic |
| TCTCACCCCTTTCCTCAGAC+AGG | 0.479050 | 3.4:-4626499 | None:intergenic |
| AGTTATGACGATGTTGTTGA+TGG | 0.479273 | 3.4:+4625621 | MS.gene51638:CDS |
| GCAGTTCCCTGTCTGAGGAA+AGG | 0.479375 | 3.4:+4626492 | MS.gene51638:CDS |
| GGAGTGGAGTAAATAAGAAC+TGG | 0.479485 | 3.4:-4626869 | None:intergenic |
| TTGGGACCAGTTGTGGATGA+AGG | 0.480067 | 3.4:+4625429 | MS.gene51638:CDS |
| TTCAGGATGGAGATCGAGAC+AGG | 0.482292 | 3.4:+4627709 | MS.gene51638:CDS |
| ACATTCTCAGCCAACACTTC+AGG | 0.487668 | 3.4:-4626221 | None:intergenic |
| GCTGAGTATTTAGTTTCTCA+GGG | 0.491586 | 3.4:+4625222 | MS.gene51638:CDS |
| TGATTCCATATATATGTCAC+TGG | 0.492456 | 3.4:+4628053 | MS.gene51638:CDS |
| AGGGAGGTGGTAGGAGGAGA+GGG | 0.492641 | 3.4:+4625496 | MS.gene51638:CDS |
| CTTTCATATCATCATCAGAA+TGG | 0.493295 | 3.4:-4626346 | None:intergenic |
| TGTTGGTATTGGTGGTGTGG+GGG | 0.493693 | 3.4:+4625350 | MS.gene51638:CDS |
| GGCAACAAGGTTAGGTGGAC+CGG | 0.495093 | 3.4:-4628761 | None:intergenic |
| ATGAAGGGTTGTCTGGGAGG+AGG | 0.497383 | 3.4:+4625445 | MS.gene51638:CDS |
| TCAGAATGGACAGGTTCTAC+CGG | 0.499116 | 3.4:-4626332 | None:intergenic |
| GTAAAAGATGCATGCAATAT+GGG | 0.499323 | 3.4:+4625888 | MS.gene51638:CDS |
| TTTGCATAGCACACCAATTG+AGG | 0.499352 | 3.4:+4626622 | MS.gene51638:CDS |
| TTGTGGATGAAGGGTTGTCT+GGG | 0.503709 | 3.4:+4625439 | MS.gene51638:CDS |
| TCTATTCAAGGCTCATCCTC+GGG | 0.504626 | 3.4:+4626245 | MS.gene51638:CDS |
| TGCACAGTATTTATGTCGTC+GGG | 0.507710 | 3.4:-4627783 | None:intergenic |
| GTGAGTATTGCTTCTGATCA+GGG | 0.510091 | 3.4:+4626695 | MS.gene51638:CDS |
| TGGATGAAGGGTTGTCTGGG+AGG | 0.510950 | 3.4:+4625442 | MS.gene51638:CDS |
| GGTGGTATTGGTAGTGGTAG+TGG | 0.511219 | 3.4:+4625642 | MS.gene51638:CDS |
| GTTGAGGTTGTTGTTGGTGG+CGG | 0.511341 | 3.4:+4625717 | MS.gene51638:CDS |
| AAAACAACAGGAGGAGGTTG+AGG | 0.511822 | 3.4:+4625701 | MS.gene51638:CDS |
| TTCAAAGACAAAACACTTGG+TGG | 0.512443 | 3.4:-4625252 | None:intergenic |
| AAGCAGGAGCAGGAGCTCTC+CGG | 0.512513 | 3.4:-4625128 | None:intergenic |
| CCTCTTGGACTACGTTGCCT+AGG | 0.512801 | 3.4:-4625033 | None:intergenic |
| TACATACCGTTCCATTATGA+AGG | 0.513581 | 3.4:-4627818 | None:intergenic |
| ATTCTGAACGTGCTTTATTG+TGG | 0.517110 | 3.4:+4628661 | MS.gene51638:CDS |
| CTGAGGAAGATCAATCTGTT+GGG | 0.517368 | 3.4:+4626390 | MS.gene51638:CDS |
| GGTAACGTCGGCATCGGCAG+CGG | 0.518216 | 3.4:+4625162 | MS.gene51638:CDS |
| ATTGAATCGGTATGCACCCT+AGG | 0.520362 | 3.4:+4625016 | None:intergenic |
| GCGATTGGGGAATAATGCGT+TGG | 0.521818 | 3.4:+4625410 | MS.gene51638:CDS |
| GTGAAGGATGGAACTGGTAG+TGG | 0.521917 | 3.4:+4625975 | MS.gene51638:CDS |
| TCATGGTCTGATAGGTTTGG+AGG | 0.522652 | 3.4:+4625573 | MS.gene51638:CDS |
| GAGTATCGCCATCGCGGTGG+TGG | 0.522865 | 3.4:+4625069 | MS.gene51638:CDS |
| AACGTCGGCATCGGCAGCGG+TGG | 0.523210 | 3.4:+4625165 | MS.gene51638:CDS |
| AAGGGAGGTGGTAGGAGGAG+AGG | 0.524121 | 3.4:+4625495 | MS.gene51638:CDS |
| TGAAGTTAAGGAGGCGGTGA+AGG | 0.524704 | 3.4:+4625959 | MS.gene51638:CDS |
| GTTAAGGAGGCGGTGAAGGA+TGG | 0.526153 | 3.4:+4625963 | MS.gene51638:CDS |
| CGATTGGGGAATAATGCGTT+GGG | 0.527248 | 3.4:+4625411 | MS.gene51638:CDS |
| GTTGTTGGTGGCGGTAGTGG+TGG | 0.529292 | 3.4:+4625726 | MS.gene51638:CDS |
| GCTGCCGGTAACGTCGGCAT+CGG | 0.529541 | 3.4:+4625156 | MS.gene51638:CDS |
| CTCACCCCTTTCCTCAGACA+GGG | 0.529761 | 3.4:-4626498 | None:intergenic |
| CTCTTGGACTACGTTGCCTA+GGG | 0.530057 | 3.4:-4625032 | None:intergenic |
| TGAACTGAGAACTACTCATA+AGG | 0.536914 | 3.4:-4626721 | None:intergenic |
| AATAGTAATGGATTTGATTG+GGG | 0.537354 | 3.4:+4625525 | MS.gene51638:CDS |
| CACATGTGAACAACGGAGAA+GGG | 0.538408 | 3.4:+4626168 | MS.gene51638:CDS |
| CATCAGCGCTTGCGCGATTG+GGG | 0.538494 | 3.4:+4625397 | MS.gene51638:CDS |
| GCAGAATTACCAGAGTTTGG+AGG | 0.538797 | 3.4:+4626467 | MS.gene51638:CDS |
| ATGCACAGTATTTATGTCGT+CGG | 0.538983 | 3.4:-4627784 | None:intergenic |
| AGGGGATGCTCATGATATTG+AGG | 0.539797 | 3.4:+4626187 | MS.gene51638:CDS |
| AAGCATCTTGGTGTTGTTGG+TGG | 0.540240 | 3.4:+4625306 | MS.gene51638:CDS |
| ACTGAGGAAGATCAATCTGT+TGG | 0.540870 | 3.4:+4626389 | MS.gene51638:CDS |
| GAGGCGGTGAAGGATGGAAC+TGG | 0.541729 | 3.4:+4625969 | MS.gene51638:CDS |
| GAGAAACGTGTCTTAGAAGA+AGG | 0.542039 | 3.4:+4626518 | MS.gene51638:CDS |
| CTTTATTTCAGGGACAGGAG+TGG | 0.544084 | 3.4:-4626885 | None:intergenic |
| TGGTCTGATAGGTTTGGAGG+TGG | 0.545842 | 3.4:+4625576 | MS.gene51638:CDS |
| GACGAATTCTTCGAGATACT+CGG | 0.549296 | 3.4:-4626014 | None:intergenic |
| TGTCAGCGAAGAGCGTGTCT+TGG | 0.551663 | 3.4:-4626123 | None:intergenic |
| ATATCATCATCAGAATGGAC+AGG | 0.553188 | 3.4:-4626341 | None:intergenic |
| GCACATGTGAACAACGGAGA+AGG | 0.553606 | 3.4:+4626167 | MS.gene51638:CDS |
| TTTGTTGCTGCCGGTAACGT+CGG | 0.553784 | 3.4:+4625150 | MS.gene51638:CDS |
| CGATTCGGTCTTTGGTATAG+GGG | 0.554544 | 3.4:-4626594 | None:intergenic |
| AGTTCTCAGTTCACAGATGA+GGG | 0.555762 | 3.4:+4626731 | MS.gene51638:CDS |
| AGTATAGAAGGAATGGATCA+TGG | 0.556335 | 3.4:+4625556 | MS.gene51638:CDS |
| GATCAGGAGAATCATAGCTC+TGG | 0.558157 | 3.4:+4626050 | MS.gene51638:CDS |
| TCTTCAAGGACCTGAAGTGT+TGG | 0.560722 | 3.4:+4626211 | MS.gene51638:CDS |
| TTACCGGCAGCAACAAAAGC+AGG | 0.564244 | 3.4:-4625144 | None:intergenic |
| TTCGGTCTTTGGTATAGGGG+AGG | 0.564332 | 3.4:-4626591 | None:intergenic |
| TCGGTCTTTGGTATAGGGGA+GGG | 0.564638 | 3.4:-4626590 | None:intergenic |
| TAATGCGTTGGGACCAGTTG+TGG | 0.565885 | 3.4:+4625422 | MS.gene51638:CDS |
| CAGAATGGACAGGTTCTACC+GGG | 0.568179 | 3.4:-4626331 | None:intergenic |
| GAACTGCAGCCTCCAAACTC+TGG | 0.568283 | 3.4:-4626476 | None:intergenic |
| TTTGGTATAGGGGAGGGCAC+AGG | 0.570963 | 3.4:-4626584 | None:intergenic |
| AGAAGAAGGCGGTGATGTCA+GGG | 0.572700 | 3.4:+4626532 | MS.gene51638:CDS |
| TTGGGCAGATCAATATCGGC+CGG | 0.572772 | 3.4:-4626917 | None:intergenic |
| GTGGCTTCTCCTCTGAACAT+TGG | 0.573021 | 3.4:-4626769 | None:intergenic |
| GAGTTTGGACACAAGGGAGG+TGG | 0.576463 | 3.4:+4625483 | MS.gene51638:CDS |
| TAGTTCTCAGTTCACAGATG+AGG | 0.578205 | 3.4:+4626730 | MS.gene51638:CDS |
| CCTGAACATCATTTGGAGCA+TGG | 0.581809 | 3.4:-4627692 | None:intergenic |
| GACACAAGGGAGGTGGTAGG+AGG | 0.583891 | 3.4:+4625490 | MS.gene51638:CDS |
| GTTTGAAGAGTTTGGACACA+AGG | 0.584740 | 3.4:+4625476 | MS.gene51638:CDS |
| TGGGACCAGTTGTGGATGAA+GGG | 0.589373 | 3.4:+4625430 | MS.gene51638:CDS |
| TATGACGATGTTGTTGATGG+TGG | 0.590956 | 3.4:+4625624 | MS.gene51638:CDS |
| TACTCATACATCAAATGGCA+AGG | 0.592222 | 3.4:+4626970 | MS.gene51638:CDS |
| TTAGGTGGACCGGTTGATCA+CGG | 0.596058 | 3.4:-4628751 | None:intergenic |
| AATTTCAAAGACAAAACACT+TGG | 0.597835 | 3.4:-4625255 | None:intergenic |
| AGCGAAGAGCGTGTCTTGGT+AGG | 0.599970 | 3.4:-4626119 | None:intergenic |
| TGGCGGTGAAGTTAAGGAGG+CGG | 0.600521 | 3.4:+4625953 | MS.gene51638:CDS |
| ATTTCAGGGGACACTTGCTG+AGG | 0.603927 | 3.4:+4628029 | MS.gene51638:intron |
| AGGCTGCAGTTCCCTGTCTG+AGG | 0.605252 | 3.4:+4626487 | MS.gene51638:CDS |
| CACAAGTCTTTGAGCTAGAG+CGG | 0.607139 | 3.4:-4628685 | None:intergenic |
| GGAGAATCATAGCTCTGGCA+TGG | 0.613203 | 3.4:+4626055 | MS.gene51638:CDS |
| GCTCCAAATGATGTTCAGGA+TGG | 0.620463 | 3.4:+4627696 | MS.gene51638:CDS |
| GGACACCGCCGAGGTAGACC+CGG | 0.621337 | 3.4:+4626313 | MS.gene51638:CDS |
| TGATATAGTGCATATTGACT+CGG | 0.622769 | 3.4:+4626292 | MS.gene51638:CDS |
| TAGATGGCAACAAGGTTAGG+TGG | 0.625752 | 3.4:-4628766 | None:intergenic |
| TGAGTTTGTGCCGACAAATG+AGG | 0.627062 | 3.4:+4625779 | MS.gene51638:CDS |
| TTGGACACAAGGGAGGTGGT+AGG | 0.630352 | 3.4:+4625487 | MS.gene51638:CDS |
| TTTGAAGAGTTTGGACACAA+GGG | 0.631516 | 3.4:+4625477 | MS.gene51638:CDS |
| AGGTTCTACCGGGTCTACCT+CGG | 0.631892 | 3.4:-4626321 | None:intergenic |
| TTGATGGTGGGGTTGACCAG+AGG | 0.633080 | 3.4:-4628719 | None:intergenic |
| GCTGACAAACAAGAATTCGA+GGG | 0.633110 | 3.4:+4626139 | MS.gene51638:CDS |
| AGTTCCCTGTCTGAGGAAAG+GGG | 0.633265 | 3.4:+4626494 | MS.gene51638:CDS |
| TGTTAGACTTCAAGATGTAG+AGG | 0.634029 | 3.4:+4625665 | MS.gene51638:CDS |
| AATGATTTAGAGAATATGAG+TGG | 0.635207 | 3.4:+4625933 | MS.gene51638:CDS |
| TGAGTATTGCTTCTGATCAG+GGG | 0.635307 | 3.4:+4626696 | MS.gene51638:CDS |
| GCTGTATCTTGACCAGATTG+AGG | 0.636488 | 3.4:-4626413 | None:intergenic |
| ACATGTGAACAACGGAGAAG+GGG | 0.642448 | 3.4:+4626169 | MS.gene51638:CDS |
| GAGTATTGCTTCTGATCAGG+GGG | 0.642815 | 3.4:+4626697 | MS.gene51638:CDS |
| GTCAGATAGCATATCACCCG+AGG | 0.643210 | 3.4:-4626261 | None:intergenic |
| GATAAGAATCAGGTTTCGGA+TGG | 0.644794 | 3.4:+4625828 | MS.gene51638:CDS |
| GAAGAGTTTGGACACAAGGG+AGG | 0.645750 | 3.4:+4625480 | MS.gene51638:CDS |
| GATTCCATATATATGTCACT+GGG | 0.646592 | 3.4:+4628054 | MS.gene51638:CDS |
| GAGTGGCGGTGAAGTTAAGG+AGG | 0.649100 | 3.4:+4625950 | MS.gene51638:CDS |
| GTTCTAAACGAACTCGACAA+CGG | 0.653289 | 3.4:-4626791 | None:intergenic |
| AATAGGCCTTCATAATGGAA+CGG | 0.656393 | 3.4:+4627812 | MS.gene51638:CDS |
| TCGGAGTATCGCCATCGCGG+TGG | 0.660136 | 3.4:+4625066 | MS.gene51638:CDS |
| CCTAGGCAACGTAGTCCAAG+AGG | 0.663087 | 3.4:+4625033 | MS.gene51638:CDS |
| GGATACTGCTTGTGAAACTG+AGG | 0.667028 | 3.4:+4626373 | MS.gene51638:CDS |
| GAGGATGGTAATGATTTGGA+AGG | 0.678699 | 3.4:+4625798 | MS.gene51638:CDS |
| CTAAACGAACTCGACAACGG+TGG | 0.680345 | 3.4:-4626788 | None:intergenic |
| TTCTACCGGGTCTACCTCGG+CGG | 0.684535 | 3.4:-4626318 | None:intergenic |
| GCCTCGGAGTATCGCCATCG+CGG | 0.687957 | 3.4:+4625063 | MS.gene51638:CDS |
| GATTTAGAGAATATGAGTGG+CGG | 0.695515 | 3.4:+4625936 | MS.gene51638:CDS |
| ACCGCGATGGCGATACTCCG+AGG | 0.700215 | 3.4:-4625064 | None:intergenic |
| AAACGTGTCTTAGAAGAAGG+CGG | 0.704132 | 3.4:+4626521 | MS.gene51638:CDS |
| TATTGACTCGGACACCGCCG+AGG | 0.712275 | 3.4:+4626304 | MS.gene51638:CDS |
| GCTCTTGCACATGTGAACAA+CGG | 0.713349 | 3.4:+4626161 | MS.gene51638:CDS |
| TTTGTGCCGACAAATGAGGA+TGG | 0.729750 | 3.4:+4625783 | MS.gene51638:CDS |
| AGAAGGCGGTGATGTCAGGG+AGG | 0.740568 | 3.4:+4626535 | MS.gene51638:CDS |
| TGAGGTGAAAGATAGCCCAG+AGG | 0.802674 | 3.4:+4626640 | MS.gene51638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTATAATAATCAAAA+TGG | + | chr3.4:4625273-4625292 | MS.gene51638:CDS | 10.0% |
| !!! | ACTTTCATTATTTTATTTCA+GGG | + | chr3.4:4628015-4628034 | MS.gene51638:intron | 15.0% |
| !!! | CTATTTATCTATGTTTTATT+GGG | + | chr3.4:4628533-4628552 | MS.gene51638:intron | 15.0% |
| !!! | TACTTTCATTATTTTATTTC+AGG | + | chr3.4:4628014-4628033 | MS.gene51638:intron | 15.0% |
| !!! | TCTATTTATCTATGTTTTAT+TGG | + | chr3.4:4628532-4628551 | MS.gene51638:intron | 15.0% |
| !! | CTTTATAATATACAAGGAAA+GGG | + | chr3.4:4627917-4627936 | MS.gene51638:intron | 20.0% |
| !! | TAATAGATTATTATGCTATC+TGG | - | chr3.4:4627975-4627994 | None:intergenic | 20.0% |
| !! | TCTTTATAATATACAAGGAA+AGG | + | chr3.4:4627916-4627935 | MS.gene51638:intron | 20.0% |
| !! | TTTAATGATGCTTTAATGAA+TGG | + | chr3.4:4628148-4628167 | MS.gene51638:intron | 20.0% |
| !! | TTTATAATATACAAGGAAAG+GGG | + | chr3.4:4627918-4627937 | MS.gene51638:intron | 20.0% |
| !!! | AAATGTTTCTAATGATCTAA+TGG | - | chr3.4:4628400-4628419 | None:intergenic | 20.0% |
| !!! | CTTTCATTATTTTATTTCAG+GGG | + | chr3.4:4628016-4628035 | MS.gene51638:intron | 20.0% |
| !!! | TAATAGTAATGGATTTGATT+GGG | + | chr3.4:4625524-4625543 | MS.gene51638:CDS | 20.0% |
| !!! | TGGATTTAATTTATAAACAC+TGG | + | chr3.4:4628337-4628356 | MS.gene51638:intron | 20.0% |
| !!! | TTAATAGTAATGGATTTGAT+TGG | + | chr3.4:4625523-4625542 | MS.gene51638:CDS | 20.0% |
| !!! | TTCATTAAAGCATCATTAAA+AGG | - | chr3.4:4628148-4628167 | None:intergenic | 20.0% |
| ! | AAGTATGTGAAAATCATCAA+TGG | - | chr3.4:4627999-4628018 | None:intergenic | 25.0% |
| ! | AATGATTTAGAGAATATGAG+TGG | + | chr3.4:4625933-4625952 | MS.gene51638:CDS | 25.0% |
| ! | AATTTCAAAGACAAAACACT+TGG | - | chr3.4:4625258-4625277 | None:intergenic | 25.0% |
| ! | ACTCATATTCTCTAAATCAT+TGG | - | chr3.4:4625934-4625953 | None:intergenic | 25.0% |
| ! | AGCAAAGAAGAAAAAACTTA+GGG | - | chr3.4:4628598-4628617 | None:intergenic | 25.0% |
| ! | GAAGAGGTTATAATAATATC+CGG | + | chr3.4:4625109-4625128 | MS.gene51638:CDS | 25.0% |
| ! | GCAAGTCTTTATAATATACA+AGG | + | chr3.4:4627911-4627930 | MS.gene51638:intron | 25.0% |
| !! | ATATTGTTATTCAAACACAC+AGG | + | chr3.4:4627631-4627650 | MS.gene51638:intron | 25.0% |
| !! | GATTATCTTTTCTTCTTGAA+TGG | - | chr3.4:4627026-4627045 | None:intergenic | 25.0% |
| !! | TGATGATGATATGAAAGAAT+TGG | + | chr3.4:4626352-4626371 | MS.gene51638:CDS | 25.0% |
| !! | TTGTATTTTCACTAAAGAGA+TGG | - | chr3.4:4627184-4627203 | None:intergenic | 25.0% |
| !! | TTTAAAGTTACACACATGAT+TGG | + | chr3.4:4628439-4628458 | MS.gene51638:intron | 25.0% |
| !! | TTTTATTGGGAATTAAGGAA+TGG | + | chr3.4:4628546-4628565 | MS.gene51638:intron | 25.0% |
| !!! | AATAGTAATGGATTTGATTG+GGG | + | chr3.4:4625525-4625544 | MS.gene51638:CDS | 25.0% |
| !!! | CTATGTTTTATTGGGAATTA+AGG | + | chr3.4:4628541-4628560 | MS.gene51638:intron | 25.0% |
| !!! | GTTGTTTTCATAAGTTATCT+TGG | - | chr3.4:4627423-4627442 | None:intergenic | 25.0% |
| !!! | TTTCATGCATGTTTTATTGA+TGG | + | chr3.4:4628317-4628336 | MS.gene51638:intron | 25.0% |
| AAAAATCACACTAGTGTATC+AGG | + | chr3.4:4626938-4626957 | MS.gene51638:CDS | 30.0% | |
| AAGTCCTAACAAACACTAAA+TGG | - | chr3.4:4627130-4627149 | None:intergenic | 30.0% | |
| AATACTGTGCATGATGAAAT+AGG | + | chr3.4:4627795-4627814 | MS.gene51638:CDS | 30.0% | |
| AATATAGGGTTTGAAGAGTT+TGG | + | chr3.4:4625468-4625487 | MS.gene51638:CDS | 30.0% | |
| ACAGCTTATATGGATGATAA+AGG | + | chr3.4:4626431-4626450 | MS.gene51638:CDS | 30.0% | |
| ACATTAAGCATGGAAGAATA+TGG | - | chr3.4:4627077-4627096 | None:intergenic | 30.0% | |
| AGATCAATTAGAACTCTGTT+TGG | - | chr3.4:4627517-4627536 | None:intergenic | 30.0% | |
| AGGCAACAAATACAAATCAT+AGG | - | chr3.4:4628128-4628147 | None:intergenic | 30.0% | |
| AGTAAAAGATGCATGCAATA+TGG | + | chr3.4:4625887-4625906 | MS.gene51638:CDS | 30.0% | |
| ATATTAGTAATAGAGCAGCA+AGG | - | chr3.4:4627613-4627632 | None:intergenic | 30.0% | |
| ATCACGGAGTAAAAATTTGA+TGG | - | chr3.4:4628738-4628757 | None:intergenic | 30.0% | |
| ATTGAAATTTCATGTTCCTC+TGG | - | chr3.4:4626659-4626678 | None:intergenic | 30.0% | |
| CTTTCATATCATCATCAGAA+TGG | - | chr3.4:4626349-4626368 | None:intergenic | 30.0% | |
| GAATTGAAACAAAGTTCTTC+TGG | + | chr3.4:4625861-4625880 | MS.gene51638:CDS | 30.0% | |
| GAGCAAAGAAGAAAAAACTT+AGG | - | chr3.4:4628599-4628618 | None:intergenic | 30.0% | |
| GATTCCATATATATGTCACT+GGG | + | chr3.4:4628054-4628073 | MS.gene51638:CDS | 30.0% | |
| GTAAAAGATGCATGCAATAT+GGG | + | chr3.4:4625888-4625907 | MS.gene51638:CDS | 30.0% | |
| TGATTCCATATATATGTCAC+TGG | + | chr3.4:4628053-4628072 | MS.gene51638:CDS | 30.0% | |
| TTCAGTACTCATACATCAAA+TGG | + | chr3.4:4626965-4626984 | MS.gene51638:CDS | 30.0% | |
| TTGAAATTTCATGTTCCTCT+GGG | - | chr3.4:4626658-4626677 | None:intergenic | 30.0% | |
| ! | AAATGAGGATGGTAATGATT+TGG | + | chr3.4:4625794-4625813 | MS.gene51638:CDS | 30.0% |
| ! | GATACACTAGTGTGATTTTT+GGG | - | chr3.4:4626938-4626957 | None:intergenic | 30.0% |
| ! | TAAATAAGAGCATGCAGAAA+GGG | - | chr3.4:4627288-4627307 | None:intergenic | 30.0% |
| ! | TGATACACTAGTGTGATTTT+TGG | - | chr3.4:4626939-4626958 | None:intergenic | 30.0% |
| ! | TGATATAGTGCATATTGACT+CGG | + | chr3.4:4626292-4626311 | MS.gene51638:CDS | 30.0% |
| ! | TTGTGTTTTCTTTTATCCTC+TGG | + | chr3.4:4628703-4628722 | MS.gene51638:CDS | 30.0% |
| !! | AGAGGGAGTTTTAATAGTAA+TGG | + | chr3.4:4625513-4625532 | MS.gene51638:CDS | 30.0% |
| !! | ATTTTTGGGCAGATCAATAT+CGG | - | chr3.4:4626924-4626943 | None:intergenic | 30.0% |
| !! | CATGTGTGTAACTTTAAAAC+TGG | - | chr3.4:4628437-4628456 | None:intergenic | 30.0% |
| !!! | AACATTTTTTGCATTGACAG+TGG | + | chr3.4:4628482-4628501 | MS.gene51638:intron | 30.0% |
| !!! | GATACGTGTGATTTTAATTG+TGG | + | chr3.4:4627874-4627893 | MS.gene51638:intron | 30.0% |
| AACAATGCTGACATTAAGCA+TGG | - | chr3.4:4627087-4627106 | None:intergenic | 35.0% | |
| AATTAGTGGGGAAAAGACTA+CGG | - | chr3.4:4628279-4628298 | None:intergenic | 35.0% | |
| ACACAAAAAGACTGAGAGAA+TGG | + | chr3.4:4626558-4626577 | MS.gene51638:CDS | 35.0% | |
| ACGGAGTAAAAATTTGATGG+TGG | - | chr3.4:4628735-4628754 | None:intergenic | 35.0% | |
| AGTATAGAAGGAATGGATCA+TGG | + | chr3.4:4625556-4625575 | MS.gene51638:CDS | 35.0% | |
| AGTTATGACGATGTTGTTGA+TGG | + | chr3.4:4625621-4625640 | MS.gene51638:CDS | 35.0% | |
| ATATCATCATCAGAATGGAC+AGG | - | chr3.4:4626344-4626363 | None:intergenic | 35.0% | |
| ATCCGAAACCTGATTCTTAT+CGG | - | chr3.4:4625829-4625848 | None:intergenic | 35.0% | |
| ATGCACAGTATTTATGTCGT+CGG | - | chr3.4:4627787-4627806 | None:intergenic | 35.0% | |
| CACAAAAAGACTGAGAGAAT+GGG | + | chr3.4:4626559-4626578 | MS.gene51638:CDS | 35.0% | |
| CATGATATTGAGGATCTTCA+AGG | + | chr3.4:4626197-4626216 | MS.gene51638:CDS | 35.0% | |
| GATGAAATAGGCCTTCATAA+TGG | + | chr3.4:4627807-4627826 | MS.gene51638:CDS | 35.0% | |
| GATTTAGAGAATATGAGTGG+CGG | + | chr3.4:4625936-4625955 | MS.gene51638:CDS | 35.0% | |
| GCTTTAATGAATGGTTGAGT+AGG | + | chr3.4:4628157-4628176 | MS.gene51638:intron | 35.0% | |
| GGAGATTGAAGTAATTGATC+TGG | + | chr3.4:4626991-4627010 | MS.gene51638:CDS | 35.0% | |
| GTCTCCATTTAGTGTTTGTT+AGG | + | chr3.4:4627123-4627142 | MS.gene51638:intron | 35.0% | |
| TAAGTTATCTTGGAGAGCTT+AGG | - | chr3.4:4627413-4627432 | None:intergenic | 35.0% | |
| TACATACCGTTCCATTATGA+AGG | - | chr3.4:4627821-4627840 | None:intergenic | 35.0% | |
| TACTCATACATCAAATGGCA+AGG | + | chr3.4:4626970-4626989 | MS.gene51638:CDS | 35.0% | |
| TACTGCACTAATGCTTTCAT+TGG | + | chr3.4:4628181-4628200 | MS.gene51638:intron | 35.0% | |
| TATTGGGAATTAAGGAATGG+TGG | + | chr3.4:4628549-4628568 | MS.gene51638:intron | 35.0% | |
| TCATTACCATCCTCATTTGT+CGG | - | chr3.4:4625792-4625811 | None:intergenic | 35.0% | |
| TGAAATAAAGGAAGCTGTAC+CGG | + | chr3.4:4626898-4626917 | MS.gene51638:CDS | 35.0% | |
| TGAACTGAGAACTACTCATA+AGG | - | chr3.4:4626724-4626743 | None:intergenic | 35.0% | |
| TGGTCAAGATACAGCTTATA+TGG | + | chr3.4:4626421-4626440 | MS.gene51638:CDS | 35.0% | |
| TGTTAGACTTCAAGATGTAG+AGG | + | chr3.4:4625665-4625684 | MS.gene51638:CDS | 35.0% | |
| TTCAAAGACAAAACACTTGG+TGG | - | chr3.4:4625255-4625274 | None:intergenic | 35.0% | |
| TTCTCCCAGTGACATATATA+TGG | - | chr3.4:4628061-4628080 | None:intergenic | 35.0% | |
| TTTGAAGAGTTTGGACACAA+GGG | + | chr3.4:4625477-4625496 | MS.gene51638:CDS | 35.0% | |
| ! | AAATAAGAGCATGCAGAAAG+GGG | - | chr3.4:4627287-4627306 | None:intergenic | 35.0% |
| ! | AATAGGCCTTCATAATGGAA+CGG | + | chr3.4:4627812-4627831 | MS.gene51638:CDS | 35.0% |
| ! | ACAGTTTTTCCAATGTTCAG+AGG | + | chr3.4:4626760-4626779 | MS.gene51638:CDS | 35.0% |
| ! | AGTAGAGAGTATAGAAGGAA+TGG | + | chr3.4:4625549-4625568 | MS.gene51638:CDS | 35.0% |
| ! | ATTCTGAACGTGCTTTATTG+TGG | + | chr3.4:4628661-4628680 | MS.gene51638:CDS | 35.0% |
| ! | ATTTTTACTCCGTGATCAAC+CGG | + | chr3.4:4628742-4628761 | MS.gene51638:CDS | 35.0% |
| ! | CGGAGTAAAAATTTGATGGT+GGG | - | chr3.4:4628734-4628753 | None:intergenic | 35.0% |
| ! | CTAAATAAGAGCATGCAGAA+AGG | - | chr3.4:4627289-4627308 | None:intergenic | 35.0% |
| ! | CTTTCTGCATGCTCTTATTT+AGG | + | chr3.4:4627287-4627306 | MS.gene51638:intron | 35.0% |
| ! | GCTATGCAAAAAGTACGATT+CGG | - | chr3.4:4626612-4626631 | None:intergenic | 35.0% |
| ! | GCTGAGTATTTAGTTTCTCA+GGG | + | chr3.4:4625222-4625241 | MS.gene51638:CDS | 35.0% |
| ! | GTACAGCTTCCTTTATTTCA+GGG | - | chr3.4:4626898-4626917 | None:intergenic | 35.0% |
| ! | TGATAATGTCACGCAGAAAT+CGG | + | chr3.4:4625749-4625768 | MS.gene51638:CDS | 35.0% |
| ! | TGCTGAGTATTTAGTTTCTC+AGG | + | chr3.4:4625221-4625240 | MS.gene51638:CDS | 35.0% |
| !! | AAAAAGTACGATTCGGTCTT+TGG | - | chr3.4:4626605-4626624 | None:intergenic | 35.0% |
| !! | GGAGTAAAAATTTGATGGTG+GGG | - | chr3.4:4628733-4628752 | None:intergenic | 35.0% |
| !!! | GGTAGTTTTAAGAAGCATCT+TGG | + | chr3.4:4625294-4625313 | MS.gene51638:CDS | 35.0% |
| !!! | TGATTTTTTCACCATGCAAC+TGG | - | chr3.4:4627557-4627576 | None:intergenic | 35.0% |
| AAACGTGTCTTAGAAGAAGG+CGG | + | chr3.4:4626521-4626540 | MS.gene51638:CDS | 40.0% | |
| ACAACAAAAACAACAGGAGG+AGG | + | chr3.4:4625695-4625714 | MS.gene51638:CDS | 40.0% | |
| ACACAGCCAAAAATGACCAT+TGG | - | chr3.4:4628625-4628644 | None:intergenic | 40.0% | |
| ACTATGTTTACAGGCCTTGA+AGG | + | chr3.4:4627660-4627679 | MS.gene51638:CDS | 40.0% | |
| ACTGAGGAAGATCAATCTGT+TGG | + | chr3.4:4626389-4626408 | MS.gene51638:CDS | 40.0% | |
| ACTGCAGAATTACCAGAGTT+TGG | + | chr3.4:4626464-4626483 | MS.gene51638:CDS | 40.0% | |
| AGACTGTTTGTGAGAGCTTA+TGG | + | chr3.4:4627368-4627387 | MS.gene51638:intron | 40.0% | |
| AGAGCTTAGGAACATGTCAT+AGG | - | chr3.4:4627400-4627419 | None:intergenic | 40.0% | |
| AGCCAAAAATGACCATTGGA+AGG | - | chr3.4:4628621-4628640 | None:intergenic | 40.0% | |
| AGGACAGACACTATGTTTAC+AGG | + | chr3.4:4627651-4627670 | MS.gene51638:intron | 40.0% | |
| AGGTGGTTCTTCGGATATTA+GGG | + | chr3.4:4625593-4625612 | MS.gene51638:CDS | 40.0% | |
| AGTATTTATGTCGTCGGGTA+CGG | - | chr3.4:4627781-4627800 | None:intergenic | 40.0% | |
| AGTTCTCAGTTCACAGATGA+GGG | + | chr3.4:4626731-4626750 | MS.gene51638:CDS | 40.0% | |
| ATAGAGCAGCAAGGTAAAGA+AGG | - | chr3.4:4627604-4627623 | None:intergenic | 40.0% | |
| CTGAGGAAGATCAATCTGTT+GGG | + | chr3.4:4626390-4626409 | MS.gene51638:CDS | 40.0% | |
| GACCGATAAGAATCAGGTTT+CGG | + | chr3.4:4625824-4625843 | MS.gene51638:CDS | 40.0% | |
| GACGAATTCTTCGAGATACT+CGG | - | chr3.4:4626017-4626036 | None:intergenic | 40.0% | |
| GAGAAACGTGTCTTAGAAGA+AGG | + | chr3.4:4626518-4626537 | MS.gene51638:CDS | 40.0% | |
| GATAAGAATCAGGTTTCGGA+TGG | + | chr3.4:4625828-4625847 | MS.gene51638:CDS | 40.0% | |
| GCTGACAAACAAGAATTCGA+GGG | + | chr3.4:4626139-4626158 | MS.gene51638:CDS | 40.0% | |
| GCTGAGAATGTGTCTATTCA+AGG | + | chr3.4:4626233-4626252 | MS.gene51638:CDS | 40.0% | |
| GGAGTGGAGTAAATAAGAAC+TGG | - | chr3.4:4626872-4626891 | None:intergenic | 40.0% | |
| GTCACTATGCAACTCTGTTA+AGG | + | chr3.4:4626094-4626113 | MS.gene51638:CDS | 40.0% | |
| GTTCAGAATTTGTAGCTGGA+GGG | - | chr3.4:4628650-4628669 | None:intergenic | 40.0% | |
| GTTTGAAGAGTTTGGACACA+AGG | + | chr3.4:4625476-4625495 | MS.gene51638:CDS | 40.0% | |
| TAGAGCAGCAAGGTAAAGAA+GGG | - | chr3.4:4627603-4627622 | None:intergenic | 40.0% | |
| TAGCGTGTCTAGGAATTAGT+GGG | - | chr3.4:4628292-4628311 | None:intergenic | 40.0% | |
| TAGTTCTCAGTTCACAGATG+AGG | + | chr3.4:4626730-4626749 | MS.gene51638:CDS | 40.0% | |
| TCGACAACAAAAACAACAGG+AGG | + | chr3.4:4625692-4625711 | MS.gene51638:CDS | 40.0% | |
| TCTCCATCCTGAACATCATT+TGG | - | chr3.4:4627702-4627721 | None:intergenic | 40.0% | |
| TGCACAGTATTTATGTCGTC+GGG | - | chr3.4:4627786-4627805 | None:intergenic | 40.0% | |
| TTCAGAATTTGTAGCTGGAG+GGG | - | chr3.4:4628649-4628668 | None:intergenic | 40.0% | |
| TTCTTCTTTGCTCCTTCCAA+TGG | + | chr3.4:4628606-4628625 | MS.gene51638:intron | 40.0% | |
| TTTGCATAGCACACCAATTG+AGG | + | chr3.4:4626622-4626641 | MS.gene51638:CDS | 40.0% | |
| ! | AGTGAGTATTGCTTCTGATC+AGG | + | chr3.4:4626694-4626713 | MS.gene51638:CDS | 40.0% |
| ! | ATGCTCTTATTTAGGACCCA+GGG | + | chr3.4:4627295-4627314 | MS.gene51638:intron | 40.0% |
| ! | GAGGATGGTAATGATTTGGA+AGG | + | chr3.4:4625798-4625817 | MS.gene51638:CDS | 40.0% |
| ! | GCATCGACAACAAAAACAAC+AGG | + | chr3.4:4625689-4625708 | MS.gene51638:CDS | 40.0% |
| ! | GGTACAGCTTCCTTTATTTC+AGG | - | chr3.4:4626899-4626918 | None:intergenic | 40.0% |
| ! | GTGAGTATTGCTTCTGATCA+GGG | + | chr3.4:4626695-4626714 | MS.gene51638:CDS | 40.0% |
| ! | GTTCTAAACGAACTCGACAA+CGG | - | chr3.4:4626794-4626813 | None:intergenic | 40.0% |
| ! | TATGACGATGTTGTTGATGG+TGG | + | chr3.4:4625624-4625643 | MS.gene51638:CDS | 40.0% |
| ! | TGAGTATTGCTTCTGATCAG+GGG | + | chr3.4:4626696-4626715 | MS.gene51638:CDS | 40.0% |
| !! | AAGAAGCATCTTGGTGTTGT+TGG | + | chr3.4:4625303-4625322 | MS.gene51638:CDS | 40.0% |
| !! | ACGATTCGGTCTTTGGTATA+GGG | - | chr3.4:4626598-4626617 | None:intergenic | 40.0% |
| !! | AGACTACGGTTCTAGAATAC+AGG | - | chr3.4:4628265-4628284 | None:intergenic | 40.0% |
| !! | CTCCTTCCAATGGTCATTTT+TGG | + | chr3.4:4628616-4628635 | MS.gene51638:intron | 40.0% |
| !! | GACTACGGTTCTAGAATACA+GGG | - | chr3.4:4628264-4628283 | None:intergenic | 40.0% |
| !! | GATGTTGTTGATGGTGGTAT+TGG | + | chr3.4:4625630-4625649 | MS.gene51638:CDS | 40.0% |
| !! | TACGATTCGGTCTTTGGTAT+AGG | - | chr3.4:4626599-4626618 | None:intergenic | 40.0% |
| !! | TGGAGGTGATATTTTTGTGG+AGG | + | chr3.4:4625185-4625204 | MS.gene51638:CDS | 40.0% |
| AAAACAACAGGAGGAGGTTG+AGG | + | chr3.4:4625701-4625720 | MS.gene51638:CDS | 45.0% | |
| AAAGGGGCCAATCAACTTGT+CGG | + | chr3.4:4627934-4627953 | MS.gene51638:intron | 45.0% | |
| ACATGTGAACAACGGAGAAG+GGG | + | chr3.4:4626169-4626188 | MS.gene51638:CDS | 45.0% | |
| ACATTAGTGAGAGAGCTGCA+AGG | - | chr3.4:4627246-4627265 | None:intergenic | 45.0% | |
| ACATTCTCAGCCAACACTTC+AGG | - | chr3.4:4626224-4626243 | None:intergenic | 45.0% | |
| AGCGTGTCTAGGAATTAGTG+GGG | - | chr3.4:4628291-4628310 | None:intergenic | 45.0% | |
| AGGGGATGCTCATGATATTG+AGG | + | chr3.4:4626187-4626206 | MS.gene51638:CDS | 45.0% | |
| AGGTGAGACCGATAAGAATC+AGG | + | chr3.4:4625818-4625837 | MS.gene51638:CDS | 45.0% | |
| ATGTCAATCCAAACAGACCC+TGG | - | chr3.4:4627315-4627334 | None:intergenic | 45.0% | |
| CACAAGTCTTTGAGCTAGAG+CGG | - | chr3.4:4628688-4628707 | None:intergenic | 45.0% | |
| CACATGTGAACAACGGAGAA+GGG | + | chr3.4:4626168-4626187 | MS.gene51638:CDS | 45.0% | |
| CACTCCTGTCCCTGAAATAA+AGG | + | chr3.4:4626886-4626905 | MS.gene51638:CDS | 45.0% | |
| CATCCTTTCTTCCAGTTGCA+TGG | + | chr3.4:4627543-4627562 | MS.gene51638:intron | 45.0% | |
| CATGGCTGGAAAAACCTTCA+AGG | - | chr3.4:4627677-4627696 | None:intergenic | 45.0% | |
| CCATGCTCCAAATGATGTTC+AGG | + | chr3.4:4627692-4627711 | MS.gene51638:CDS | 45.0% | |
| CGATTGGGGAATAATGCGTT+GGG | + | chr3.4:4625411-4625430 | MS.gene51638:CDS | 45.0% | |
| CGCTGACAAACAAGAATTCG+AGG | + | chr3.4:4626138-4626157 | MS.gene51638:CDS | 45.0% | |
| CGTTCAGAATTTGTAGCTGG+AGG | - | chr3.4:4628651-4628670 | None:intergenic | 45.0% | |
| CTAGCGTGTCTAGGAATTAG+TGG | - | chr3.4:4628293-4628312 | None:intergenic | 45.0% | |
| GAGGTGGTTCTTCGGATATT+AGG | + | chr3.4:4625592-4625611 | MS.gene51638:CDS | 45.0% | |
| GATCAGGAGAATCATAGCTC+TGG | + | chr3.4:4626050-4626069 | MS.gene51638:CDS | 45.0% | |
| GCACGTTCAGAATTTGTAGC+TGG | - | chr3.4:4628654-4628673 | None:intergenic | 45.0% | |
| GCAGAATTACCAGAGTTTGG+AGG | + | chr3.4:4626467-4626486 | MS.gene51638:CDS | 45.0% | |
| GCTCCAAATGATGTTCAGGA+TGG | + | chr3.4:4627696-4627715 | MS.gene51638:CDS | 45.0% | |
| GCTCTTGCACATGTGAACAA+CGG | + | chr3.4:4626161-4626180 | MS.gene51638:CDS | 45.0% | |
| GCTGTATCTTGACCAGATTG+AGG | - | chr3.4:4626416-4626435 | None:intergenic | 45.0% | |
| GGAATGGATCATGGTCTGAT+AGG | + | chr3.4:4625565-4625584 | MS.gene51638:CDS | 45.0% | |
| GGATACTGCTTGTGAAACTG+AGG | + | chr3.4:4626373-4626392 | MS.gene51638:CDS | 45.0% | |
| GGATCATGGTCTGATAGGTT+TGG | + | chr3.4:4625570-4625589 | MS.gene51638:CDS | 45.0% | |
| GGGCTATCTTTCACCTCAAT+TGG | - | chr3.4:4626638-4626657 | None:intergenic | 45.0% | |
| GGTTTCGGATGGTGAATTGT+TGG | + | chr3.4:4625839-4625858 | MS.gene51638:CDS | 45.0% | |
| GTCTATTCAAGGCTCATCCT+CGG | + | chr3.4:4626244-4626263 | MS.gene51638:CDS | 45.0% | |
| TAGGTTTGGAGGTGGTTCTT+CGG | + | chr3.4:4625584-4625603 | MS.gene51638:CDS | 45.0% | |
| TATGAGTGGCGGTGAAGTTA+AGG | + | chr3.4:4625947-4625966 | MS.gene51638:CDS | 45.0% | |
| TCACCATGCAACTGGAAGAA+AGG | - | chr3.4:4627549-4627568 | None:intergenic | 45.0% | |
| TCAGAATGGACAGGTTCTAC+CGG | - | chr3.4:4626335-4626354 | None:intergenic | 45.0% | |
| TCATGGTCTGATAGGTTTGG+AGG | + | chr3.4:4625573-4625592 | MS.gene51638:CDS | 45.0% | |
| TCTATTCAAGGCTCATCCTC+GGG | + | chr3.4:4626245-4626264 | MS.gene51638:CDS | 45.0% | |
| TCTTCAAGGACCTGAAGTGT+TGG | + | chr3.4:4626211-4626230 | MS.gene51638:CDS | 45.0% | |
| TGGGAATTAAGGAATGGTGG+TGG | + | chr3.4:4628552-4628571 | MS.gene51638:intron | 45.0% | |
| TGTCAATCCAAACAGACCCT+GGG | - | chr3.4:4627314-4627333 | None:intergenic | 45.0% | |
| TGTCTGGGAGGAGGAATATA+GGG | + | chr3.4:4625454-4625473 | MS.gene51638:CDS | 45.0% | |
| TTGTCTGGGAGGAGGAATAT+AGG | + | chr3.4:4625453-4625472 | MS.gene51638:CDS | 45.0% | |
| TTGTGGATGAAGGGTTGTCT+GGG | + | chr3.4:4625439-4625458 | MS.gene51638:CDS | 45.0% | |
| ! | AACATCATTTGGAGCATGGC+TGG | - | chr3.4:4627691-4627710 | None:intergenic | 45.0% |
| ! | CATGCTCTTATTTAGGACCC+AGG | + | chr3.4:4627294-4627313 | MS.gene51638:intron | 45.0% |
| ! | CCTGAACATCATTTGGAGCA+TGG | - | chr3.4:4627695-4627714 | None:intergenic | 45.0% |
| ! | CTTTATTTCAGGGACAGGAG+TGG | - | chr3.4:4626888-4626907 | None:intergenic | 45.0% |
| ! | GAGTATTGCTTCTGATCAGG+GGG | + | chr3.4:4626697-4626716 | MS.gene51638:CDS | 45.0% |
| ! | GCTTCCTTTATTTCAGGGAC+AGG | - | chr3.4:4626893-4626912 | None:intergenic | 45.0% |
| ! | GGGGTAGTAGAGAGTATAGA+AGG | + | chr3.4:4625544-4625563 | MS.gene51638:CDS | 45.0% |
| ! | TGAGTTTGTGCCGACAAATG+AGG | + | chr3.4:4625779-4625798 | MS.gene51638:CDS | 45.0% |
| ! | TTTGTGCCGACAAATGAGGA+TGG | + | chr3.4:4625783-4625802 | MS.gene51638:CDS | 45.0% |
| !! | AAGCATCTTGGTGTTGTTGG+TGG | + | chr3.4:4625306-4625325 | MS.gene51638:CDS | 45.0% |
| !! | AATGCAGCCGACAAGTTGAT+TGG | - | chr3.4:4627944-4627963 | None:intergenic | 45.0% |
| !! | CGATTCGGTCTTTGGTATAG+GGG | - | chr3.4:4626597-4626616 | None:intergenic | 45.0% |
| !! | CGGTGGAGGTGATATTTTTG+TGG | + | chr3.4:4625182-4625201 | MS.gene51638:CDS | 45.0% |
| !! | GGTGATATTTTTGTGGAGGC+AGG | + | chr3.4:4625189-4625208 | MS.gene51638:CDS | 45.0% |
| !! | GTTGATGGTGGTATTGGTAG+TGG | + | chr3.4:4625636-4625655 | MS.gene51638:CDS | 45.0% |
| !! | GTTGTTGGTGGTGTTGGTAT+TGG | + | chr3.4:4625318-4625337 | MS.gene51638:CDS | 45.0% |
| !! | TGAAAGTGTCTAGCGTGTCT+AGG | - | chr3.4:4628302-4628321 | None:intergenic | 45.0% |
| AGAAGAAGGCGGTGATGTCA+GGG | + | chr3.4:4626532-4626551 | MS.gene51638:CDS | 50.0% | |
| AGTTCCCTGTCTGAGGAAAG+GGG | + | chr3.4:4626494-4626513 | MS.gene51638:CDS | 50.0% | |
| CAATCTGTTGGGCCTCAATC+TGG | + | chr3.4:4626401-4626420 | MS.gene51638:CDS | 50.0% | |
| CAGAATGGACAGGTTCTACC+GGG | - | chr3.4:4626334-4626353 | None:intergenic | 50.0% | |
| CAGTTCCCTGTCTGAGGAAA+GGG | + | chr3.4:4626493-4626512 | MS.gene51638:CDS | 50.0% | |
| CTAAACGAACTCGACAACGG+TGG | - | chr3.4:4626791-4626810 | None:intergenic | 50.0% | |
| CTCTTGGACTACGTTGCCTA+GGG | - | chr3.4:4625035-4625054 | None:intergenic | 50.0% | |
| GAAGAGTTTGGACACAAGGG+AGG | + | chr3.4:4625480-4625499 | MS.gene51638:CDS | 50.0% | |
| GACAACCCTTCATCCACAAC+TGG | - | chr3.4:4625438-4625457 | None:intergenic | 50.0% | |
| GAGGAGGTTGAGGTTGTTGT+TGG | + | chr3.4:4625711-4625730 | MS.gene51638:CDS | 50.0% | |
| GCACATGTGAACAACGGAGA+AGG | + | chr3.4:4626167-4626186 | MS.gene51638:CDS | 50.0% | |
| GCGATTGGGGAATAATGCGT+TGG | + | chr3.4:4625410-4625429 | MS.gene51638:CDS | 50.0% | |
| GTCAGATAGCATATCACCCG+AGG | - | chr3.4:4626264-4626283 | None:intergenic | 50.0% | |
| GTCTGCTGAGTCAAGTGATC+AGG | + | chr3.4:4626034-4626053 | MS.gene51638:CDS | 50.0% | |
| GTGAAGGATGGAACTGGTAG+TGG | + | chr3.4:4625975-4625994 | MS.gene51638:CDS | 50.0% | |
| GTGGCTTCTCCTCTGAACAT+TGG | - | chr3.4:4626772-4626791 | None:intergenic | 50.0% | |
| GTTGTGGATGAAGGGTTGTC+TGG | + | chr3.4:4625438-4625457 | MS.gene51638:CDS | 50.0% | |
| TAATGCGTTGGGACCAGTTG+TGG | + | chr3.4:4625422-4625441 | MS.gene51638:CDS | 50.0% | |
| TAGAAGAAGGCGGTGATGTC+AGG | + | chr3.4:4626531-4626550 | MS.gene51638:CDS | 50.0% | |
| TCGGTCTTTGGTATAGGGGA+GGG | - | chr3.4:4626593-4626612 | None:intergenic | 50.0% | |
| TGAAGTTAAGGAGGCGGTGA+AGG | + | chr3.4:4625959-4625978 | MS.gene51638:CDS | 50.0% | |
| TGAGGTGAAAGATAGCCCAG+AGG | + | chr3.4:4626640-4626659 | MS.gene51638:CDS | 50.0% | |
| TGGGACCAGTTGTGGATGAA+GGG | + | chr3.4:4625430-4625449 | MS.gene51638:CDS | 50.0% | |
| TGGTCTGATAGGTTTGGAGG+TGG | + | chr3.4:4625576-4625595 | MS.gene51638:CDS | 50.0% | |
| TTACCGGCAGCAACAAAAGC+AGG | - | chr3.4:4625147-4625166 | None:intergenic | 50.0% | |
| TTAGGTGGACCGGTTGATCA+CGG | - | chr3.4:4628754-4628773 | None:intergenic | 50.0% | |
| TTCAGGATGGAGATCGAGAC+AGG | + | chr3.4:4627709-4627728 | MS.gene51638:CDS | 50.0% | |
| TTCGGTCTTTGGTATAGGGG+AGG | - | chr3.4:4626594-4626613 | None:intergenic | 50.0% | |
| TTGGGACCAGTTGTGGATGA+AGG | + | chr3.4:4625429-4625448 | MS.gene51638:CDS | 50.0% | |
| TTGGGCAGATCAATATCGGC+CGG | - | chr3.4:4626920-4626939 | None:intergenic | 50.0% | |
| TTTGTTGCTGCCGGTAACGT+CGG | + | chr3.4:4625150-4625169 | MS.gene51638:CDS | 50.0% | |
| ! | ATTTCAGGGGACACTTGCTG+AGG | + | chr3.4:4628029-4628048 | MS.gene51638:intron | 50.0% |
| ! | GAGGTTGAGGTTGTTGTTGG+TGG | + | chr3.4:4625714-4625733 | MS.gene51638:CDS | 50.0% |
| ! | GTTGAGGTTGTTGTTGGTGG+CGG | + | chr3.4:4625717-4625736 | MS.gene51638:CDS | 50.0% |
| ! | TCCAAGAGGCTTTTACGCCT+CGG | + | chr3.4:4625047-4625066 | MS.gene51638:CDS | 50.0% |
| ! | TTTAGGACCCAGGGTCTGTT+TGG | + | chr3.4:4627304-4627323 | MS.gene51638:intron | 50.0% |
| !! | AAGGAATGGTGGTGGTCGTA+GGG | + | chr3.4:4628560-4628579 | MS.gene51638:intron | 50.0% |
| !! | ATTGGTGGTGTGGGGGAAAT+TGG | + | chr3.4:4625357-4625376 | MS.gene51638:CDS | 50.0% |
| !! | CTTGGTGTTGTTGGTGGTGT+TGG | + | chr3.4:4625312-4625331 | MS.gene51638:CDS | 50.0% |
| !! | GGAGAATCATAGCTCTGGCA+TGG | + | chr3.4:4626055-4626074 | MS.gene51638:CDS | 50.0% |
| !! | GGTATTGGTGTTGGTGGTGT+TGG | + | chr3.4:4625333-4625352 | MS.gene51638:CDS | 50.0% |
| !! | GGTGGTATTGGTAGTGGTAG+TGG | + | chr3.4:4625642-4625661 | MS.gene51638:CDS | 50.0% |
| !! | GGTGGTGTTGGTATTGGTGT+TGG | + | chr3.4:4625324-4625343 | MS.gene51638:CDS | 50.0% |
| !! | GGTGTTGGTATTGGTGGTGT+GGG | + | chr3.4:4625348-4625367 | MS.gene51638:CDS | 50.0% |
| !! | GGTGTTGGTATTGGTGTTGG+TGG | + | chr3.4:4625327-4625346 | MS.gene51638:CDS | 50.0% |
| !! | GGTGTTGGTGGTGTTGGTAT+TGG | + | chr3.4:4625339-4625358 | MS.gene51638:CDS | 50.0% |
| !! | GTGTTGGTATTGGTGGTGTG+GGG | + | chr3.4:4625349-4625368 | MS.gene51638:CDS | 50.0% |
| !! | GTTGGTGGTGTTGGTATTGG+TGG | + | chr3.4:4625321-4625340 | MS.gene51638:CDS | 50.0% |
| !! | TAAGGAATGGTGGTGGTCGT+AGG | + | chr3.4:4628559-4628578 | MS.gene51638:intron | 50.0% |
| !! | TGGTGTTGGTATTGGTGGTG+TGG | + | chr3.4:4625347-4625366 | MS.gene51638:CDS | 50.0% |
| !! | TGTTGGTATTGGTGGTGTGG+GGG | + | chr3.4:4625350-4625369 | MS.gene51638:CDS | 50.0% |
| !! | TTGGTGGTGTGGGGGAAATT+GGG | + | chr3.4:4625358-4625377 | MS.gene51638:CDS | 50.0% |
| !!! | GGTGGTGATGGTTTTGGAAG+AGG | + | chr3.4:4625093-4625112 | MS.gene51638:CDS | 50.0% |
| ACATCAGCGCTTGCGCGATT+GGG | + | chr3.4:4625396-4625415 | MS.gene51638:CDS | 55.0% | |
| AGGTTCTACCGGGTCTACCT+CGG | - | chr3.4:4626324-4626343 | None:intergenic | 55.0% | |
| ATGAAGGGTTGTCTGGGAGG+AGG | + | chr3.4:4625445-4625464 | MS.gene51638:CDS | 55.0% | |
| CCTAGGCAACGTAGTCCAAG+AGG | + | chr3.4:4625033-4625052 | MS.gene51638:CDS | 55.0% | |
| CCTCTTGGACTACGTTGCCT+AGG | - | chr3.4:4625036-4625055 | None:intergenic | 55.0% | |
| CTCACCCCTTTCCTCAGACA+GGG | - | chr3.4:4626501-4626520 | None:intergenic | 55.0% | |
| GAACTGCAGCCTCCAAACTC+TGG | - | chr3.4:4626479-4626498 | None:intergenic | 55.0% | |
| GAGTGGCGGTGAAGTTAAGG+AGG | + | chr3.4:4625950-4625969 | MS.gene51638:CDS | 55.0% | |
| GAGTTTGGACACAAGGGAGG+TGG | + | chr3.4:4625483-4625502 | MS.gene51638:CDS | 55.0% | |
| GCAGCAACAAAAGCAGGAGC+AGG | - | chr3.4:4625141-4625160 | None:intergenic | 55.0% | |
| GCAGTTCCCTGTCTGAGGAA+AGG | + | chr3.4:4626492-4626511 | MS.gene51638:CDS | 55.0% | |
| GTTAAGGAGGCGGTGAAGGA+TGG | + | chr3.4:4625963-4625982 | MS.gene51638:CDS | 55.0% | |
| TCCGAGGCGTAAAAGCCTCT+TGG | - | chr3.4:4625051-4625070 | None:intergenic | 55.0% | |
| TCTCACCCCTTTCCTCAGAC+AGG | - | chr3.4:4626502-4626521 | None:intergenic | 55.0% | |
| TGGATGAAGGGTTGTCTGGG+AGG | + | chr3.4:4625442-4625461 | MS.gene51638:CDS | 55.0% | |
| TGGCGGTGAAGTTAAGGAGG+CGG | + | chr3.4:4625953-4625972 | MS.gene51638:CDS | 55.0% | |
| TGGGGGAAATTGGGGTGGAT+GGG | + | chr3.4:4625367-4625386 | MS.gene51638:CDS | 55.0% | |
| TTGGACACAAGGGAGGTGGT+AGG | + | chr3.4:4625487-4625506 | MS.gene51638:CDS | 55.0% | |
| ! | AGCGAAGAGCGTGTCTTGGT+AGG | - | chr3.4:4626122-4626141 | None:intergenic | 55.0% |
| ! | TGGTGGTGTGGGGGAAATTG+GGG | + | chr3.4:4625359-4625378 | MS.gene51638:CDS | 55.0% |
| ! | TGTCAGCGAAGAGCGTGTCT+TGG | - | chr3.4:4626126-4626145 | None:intergenic | 55.0% |
| ! | TTTGGTATAGGGGAGGGCAC+AGG | - | chr3.4:4626587-4626606 | None:intergenic | 55.0% |
| !! | AGGAATGGTGGTGGTCGTAG+GGG | + | chr3.4:4628561-4628580 | MS.gene51638:intron | 55.0% |
| !! | GCTCCTGCTTTTGTTGCTGC+CGG | + | chr3.4:4625141-4625160 | MS.gene51638:CDS | 55.0% |
| !! | GTTGTTGTTGGTGGCGGTAG+TGG | + | chr3.4:4625723-4625742 | MS.gene51638:CDS | 55.0% |
| !! | TTGATGGTGGGGTTGACCAG+AGG | - | chr3.4:4628722-4628741 | None:intergenic | 55.0% |
| !!! | GGTGGTGGTGGTGATGGTTT+TGG | + | chr3.4:4625087-4625106 | MS.gene51638:CDS | 55.0% |
| AAATTGGGGTGGATGGGGGG+AGG | + | chr3.4:4625373-4625392 | MS.gene51638:CDS | 60.0% | |
| AAGCAGGAGCAGGAGCTCTC+CGG | - | chr3.4:4625131-4625150 | None:intergenic | 60.0% | |
| AAGGGAGGTGGTAGGAGGAG+AGG | + | chr3.4:4625495-4625514 | MS.gene51638:CDS | 60.0% | |
| AGAAGGCGGTGATGTCAGGG+AGG | + | chr3.4:4626535-4626554 | MS.gene51638:CDS | 60.0% | |
| AGGCTGCAGTTCCCTGTCTG+AGG | + | chr3.4:4626487-4626506 | MS.gene51638:CDS | 60.0% | |
| AGGGAGGTGGTAGGAGGAGA+GGG | + | chr3.4:4625496-4625515 | MS.gene51638:CDS | 60.0% | |
| CATCAGCGCTTGCGCGATTG+GGG | + | chr3.4:4625397-4625416 | MS.gene51638:CDS | 60.0% | |
| GACACAAGGGAGGTGGTAGG+AGG | + | chr3.4:4625490-4625509 | MS.gene51638:CDS | 60.0% | |
| GACATCAGCGCTTGCGCGAT+TGG | + | chr3.4:4625395-4625414 | MS.gene51638:CDS | 60.0% | |
| GAGGCGGTGAAGGATGGAAC+TGG | + | chr3.4:4625969-4625988 | MS.gene51638:CDS | 60.0% | |
| GGGAAATTGGGGTGGATGGG+GGG | + | chr3.4:4625370-4625389 | MS.gene51638:CDS | 60.0% | |
| GGGGAAATTGGGGTGGATGG+GGG | + | chr3.4:4625369-4625388 | MS.gene51638:CDS | 60.0% | |
| GGGGGAAATTGGGGTGGATG+GGG | + | chr3.4:4625368-4625387 | MS.gene51638:CDS | 60.0% | |
| GTGGGGGAAATTGGGGTGGA+TGG | + | chr3.4:4625366-4625385 | MS.gene51638:CDS | 60.0% | |
| TGGTGTGGGGGAAATTGGGG+TGG | + | chr3.4:4625362-4625381 | MS.gene51638:CDS | 60.0% | |
| TTCTACCGGGTCTACCTCGG+CGG | - | chr3.4:4626321-4626340 | None:intergenic | 60.0% | |
| !! | GAATGGTGGTGGTCGTAGGG+GGG | + | chr3.4:4628563-4628582 | MS.gene51638:intron | 60.0% |
| !! | GGAATGGTGGTGGTCGTAGG+GGG | + | chr3.4:4628562-4628581 | MS.gene51638:intron | 60.0% |
| !! | GTTGTTGGTGGCGGTAGTGG+TGG | + | chr3.4:4625726-4625745 | MS.gene51638:CDS | 60.0% |
| !! | TATTGACTCGGACACCGCCG+AGG | + | chr3.4:4626304-4626323 | MS.gene51638:CDS | 60.0% |
| ACCGCGATGGCGATACTCCG+AGG | - | chr3.4:4625067-4625086 | None:intergenic | 65.0% | |
| GCTGCCGATGCCGACGTTAC+CGG | - | chr3.4:4625163-4625182 | None:intergenic | 65.0% | |
| GCTGCCGGTAACGTCGGCAT+CGG | + | chr3.4:4625156-4625175 | MS.gene51638:CDS | 65.0% | |
| ! | GAGTATCGCCATCGCGGTGG+TGG | + | chr3.4:4625069-4625088 | MS.gene51638:CDS | 65.0% |
| ! | TATCGCCATCGCGGTGGTGG+TGG | + | chr3.4:4625072-4625091 | MS.gene51638:CDS | 65.0% |
| !! | GCCTCGGAGTATCGCCATCG+CGG | + | chr3.4:4625063-4625082 | MS.gene51638:CDS | 65.0% |
| !! | GGTAACGTCGGCATCGGCAG+CGG | + | chr3.4:4625162-4625181 | MS.gene51638:CDS | 65.0% |
| !! | TCGGAGTATCGCCATCGCGG+TGG | + | chr3.4:4625066-4625085 | MS.gene51638:CDS | 65.0% |
| CACCACCACCACCACCGCGA+TGG | - | chr3.4:4625080-4625099 | None:intergenic | 70.0% | |
| GGACACCGCCGAGGTAGACC+CGG | + | chr3.4:4626313-4626332 | MS.gene51638:CDS | 70.0% | |
| ! | GGTGGTGGTCGTAGGGGGGT+TGG | + | chr3.4:4628567-4628586 | MS.gene51638:intron | 70.0% |
| !! | AACGTCGGCATCGGCAGCGG+TGG | + | chr3.4:4625165-4625184 | MS.gene51638:CDS | 70.0% |
| !! | CGCGGTGGTGGTGGTGGTGA+TGG | + | chr3.4:4625081-4625100 | MS.gene51638:CDS | 70.0% |
| !! | CGCCATCGCGGTGGTGGTGG+TGG | + | chr3.4:4625075-4625094 | MS.gene51638:CDS | 75.0% |
| !! | GTCGGCATCGGCAGCGGTGG+AGG | + | chr3.4:4625168-4625187 | MS.gene51638:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 4625027 | 4628773 | 4625027 | ID=MS.gene51638 |
| chr3.4 | mRNA | 4625027 | 4628773 | 4625027 | ID=MS.gene51638.t1;Parent=MS.gene51638 |
| chr3.4 | exon | 4625027 | 4627062 | 4625027 | ID=MS.gene51638.t1.exon1;Parent=MS.gene51638.t1 |
| chr3.4 | CDS | 4625027 | 4627062 | 4625027 | ID=cds.MS.gene51638.t1;Parent=MS.gene51638.t1 |
| chr3.4 | exon | 4627653 | 4627833 | 4627653 | ID=MS.gene51638.t1.exon2;Parent=MS.gene51638.t1 |
| chr3.4 | CDS | 4627653 | 4627833 | 4627653 | ID=cds.MS.gene51638.t1;Parent=MS.gene51638.t1 |
| chr3.4 | exon | 4628036 | 4628084 | 4628036 | ID=MS.gene51638.t1.exon3;Parent=MS.gene51638.t1 |
| chr3.4 | CDS | 4628036 | 4628084 | 4628036 | ID=cds.MS.gene51638.t1;Parent=MS.gene51638.t1 |
| chr3.4 | exon | 4628655 | 4628773 | 4628655 | ID=MS.gene51638.t1.exon4;Parent=MS.gene51638.t1 |
| chr3.4 | CDS | 4628655 | 4628773 | 4628655 | ID=cds.MS.gene51638.t1;Parent=MS.gene51638.t1 |
| Gene Sequence |
| Protein sequence |
