Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050361.t1 | XP_003591325.1 | 95.7 | 253 | 11 | 0 | 1 | 253 | 1 | 253 | 4.00E-135 | 490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050361.t1 | Q9SMX9 | 57.3 | 248 | 62 | 8 | 6 | 253 | 8 | 211 | 5.4e-64 | 245.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050361.t1 | G7IBS5 | 95.7 | 253 | 11 | 0 | 1 | 253 | 1 | 253 | 2.9e-135 | 490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050361.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene050361 | 0.801399 | 9.17E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene050361 | 0.811253 | 7.68E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene050646 | 0.811319 | 7.43E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene050654 | 0.812235 | 4.69E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene050762 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene050763 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene051631 | -0.809595 | 1.75E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene051856 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene052242 | -0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene052609 | 0.803332 | 3.67E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene052776 | 0.806976 | 6.33E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene052994 | 0.812323 | 4.49E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene054379 | 0.808667 | 2.77E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene056045 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene056480 | 0.837645 | 4.60E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene058081 | 0.817802 | 2.73E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene059007 | 0.8213 | 4.34E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene060296 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene060400 | 0.818143 | 2.29E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene061958 | 0.825786 | 3.88E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene063772 | 0.844225 | 8.62E-59 | -1.69E-46 |
| MS.gene050361 | MS.gene064340 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene06488 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene065593 | 0.823294 | 1.50E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene065934 | 0.852358 | 4.87E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene066047 | 0.812532 | 4.04E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene066718 | 0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene066840 | 0.829662 | 4.54E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene066842 | 0.854515 | 1.17E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene06740 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene069519 | 0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene06958 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene069690 | 0.838582 | 2.64E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene071667 | -0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene071670 | -0.801323 | 9.50E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene071699 | 0.842133 | 3.12E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene072564 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene072565 | 0.801338 | 9.44E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene072742 | 0.854889 | 9.11E-62 | -1.69E-46 |
| MS.gene050361 | MS.gene072870 | 0.828471 | 8.83E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene073132 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene073390 | 0.855348 | 6.70E-62 | -1.69E-46 |
| MS.gene050361 | MS.gene073921 | 0.834196 | 3.45E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene074329 | 0.822449 | 2.35E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene074462 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene07455 | 0.812359 | 4.41E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene074587 | 0.829915 | 3.94E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene08131 | 0.826325 | 2.89E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene08889 | 0.830452 | 2.91E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene08961 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene09186 | -0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene09187 | -0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene20077 | 0.832635 | 8.45E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene22288 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene22322 | 0.854152 | 1.49E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene22695 | 0.824414 | 8.18E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene23484 | 0.822344 | 2.49E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene23513 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene24203 | 0.834842 | 2.37E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene24541 | -0.828778 | 7.44E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene24907 | 0.822128 | 2.80E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene25079 | 0.822526 | 2.26E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene25293 | 0.852651 | 4.01E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene25468 | 0.802892 | 4.52E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene26485 | 0.806802 | 6.89E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene27025 | 0.806658 | 7.39E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene27026 | 0.804858 | 1.76E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene27287 | 0.841557 | 4.42E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene27401 | 0.848069 | 7.75E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene27545 | 0.821142 | 4.72E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene28623 | 0.801589 | 8.39E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene28860 | 0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene29041 | 0.819809 | 9.55E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene29209 | 0.80857 | 2.90E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene29361 | 0.838675 | 2.50E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene30753 | 0.818643 | 1.76E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene31205 | 0.844131 | 9.14E-59 | -1.69E-46 |
| MS.gene050361 | MS.gene32657 | 0.876891 | 9.74E-69 | -1.69E-46 |
| MS.gene050361 | MS.gene32704 | -0.809631 | 1.72E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene32863 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene32884 | 0.835822 | 1.34E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene32973 | -0.832424 | 9.53E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene33180 | 0.805068 | 1.60E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene33363 | 0.843336 | 1.49E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene33364 | 0.832709 | 8.10E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene33365 | 0.826004 | 3.44E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene33793 | -0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene35323 | 0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene35645 | 0.800219 | 1.60E-48 | -1.69E-46 |
| MS.gene050361 | MS.gene35808 | 0.836848 | 7.36E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene36154 | 0.822367 | 2.46E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene37032 | 0.818915 | 1.53E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene37468 | 0.82172 | 3.48E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene37491 | 0.822573 | 2.20E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene40510 | 0.80959 | 1.75E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene40806 | 0.816647 | 4.96E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene41798 | 0.837071 | 6.45E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene41903 | 0.852379 | 4.80E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene42821 | 0.840783 | 7.06E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene43152 | 0.837147 | 6.17E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene43838 | 0.861433 | 1.03E-63 | -1.69E-46 |
| MS.gene050361 | MS.gene44406 | -0.803435 | 3.49E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene45407 | -0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene47674 | 0.815978 | 7.01E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene47695 | 0.807138 | 5.85E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene48283 | 0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene51028 | 0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene51029 | 0.855074 | 8.05E-62 | -1.69E-46 |
| MS.gene050361 | MS.gene51638 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene51929 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene52002 | 0.848591 | 5.56E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene52610 | 0.835636 | 1.50E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene52956 | 0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene53233 | 0.809259 | 2.07E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene53552 | 0.838967 | 2.10E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene56163 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene56356 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene57217 | -0.807962 | 3.91E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene57572 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene57725 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene57786 | 0.856907 | 2.34E-62 | -1.69E-46 |
| MS.gene050361 | MS.gene57894 | 0.809764 | 1.61E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene58053 | 0.83392 | 4.04E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene58134 | 0.819905 | 9.08E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene58193 | 0.805863 | 1.09E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene58617 | 0.84395 | 1.02E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene58763 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene59366 | 0.824759 | 6.78E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene59513 | 0.810833 | 9.47E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene60144 | 0.857978 | 1.13E-62 | -1.69E-46 |
| MS.gene050361 | MS.gene60399 | 0.801083 | 1.06E-48 | -1.69E-46 |
| MS.gene050361 | MS.gene61166 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene61644 | 0.823293 | 1.50E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene61911 | 0.832706 | 8.11E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene62798 | 0.80312 | 4.06E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene63530 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene050361 | MS.gene63930 | 0.811369 | 7.25E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene66825 | 0.823295 | 1.50E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene66858 | 0.843779 | 1.14E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene66859 | 0.824049 | 9.96E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene70469 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene70846 | 0.819421 | 1.17E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene71312 | 0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene71490 | 0.839151 | 1.88E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene71785 | 0.806177 | 9.33E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene74244 | 0.806966 | 6.36E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene74930 | 0.835958 | 1.24E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene74932 | 0.845536 | 3.82E-59 | -1.69E-46 |
| MS.gene050361 | MS.gene75012 | 0.810381 | 1.19E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene75072 | 0.808459 | 3.06E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene75866 | 0.850495 | 1.64E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene76317 | 0.821417 | 4.08E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene79797 | 0.803692 | 3.09E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene80233 | 0.877971 | 4.09E-69 | -1.69E-46 |
| MS.gene050361 | MS.gene80574 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene80703 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene82806 | 0.800767 | 1.24E-48 | -1.69E-46 |
| MS.gene050361 | MS.gene82839 | 0.811731 | 6.05E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene82989 | 0.834615 | 2.71E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene83056 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene83689 | 0.8389 | 2.18E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene84457 | 0.824257 | 8.90E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene84840 | 0.842945 | 1.90E-58 | -1.69E-46 |
| MS.gene050361 | MS.gene84841 | 0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene86267 | 0.814257 | 1.69E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene87622 | 0.813707 | 2.23E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene87740 | 0.825652 | 4.17E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene88649 | 0.845488 | 3.94E-59 | -1.69E-46 |
| MS.gene050361 | MS.gene89369 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene89730 | 0.818414 | 1.98E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene89888 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene90431 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene90747 | 0.814 | 1.93E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene90763 | 0.828807 | 7.32E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene91416 | 0.816783 | 4.63E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene93728 | 0.820759 | 5.79E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene94549 | 0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene94952 | 0.817911 | 2.58E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene95096 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene95339 | 0.850966 | 1.21E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene96102 | 0.832506 | 9.09E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene96103 | 0.815962 | 7.07E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene96260 | 0.849244 | 3.66E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene96353 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene96510 | 0.849803 | 2.56E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene97003 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene97281 | 0.836368 | 9.75E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene99525 | 0.809783 | 1.60E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050361.t1 | MTR_1g086250 | 95.652 | 253 | 11 | 0 | 1 | 253 | 1 | 253 | 7.98e-158 | 464 |
| MS.gene050361.t1 | MTR_7g110320 | 65.041 | 246 | 64 | 8 | 8 | 240 | 2 | 238 | 4.68e-91 | 286 |
| MS.gene050361.t1 | MTR_7g110320 | 66.409 | 259 | 65 | 8 | 8 | 253 | 2 | 251 | 2.36e-90 | 287 |
| MS.gene050361.t1 | MTR_2g046550 | 54.826 | 259 | 98 | 7 | 1 | 253 | 1 | 246 | 5.28e-80 | 259 |
| MS.gene050361.t1 | MTR_1g035010 | 56.115 | 139 | 56 | 3 | 115 | 251 | 74 | 209 | 3.18e-41 | 150 |
| MS.gene050361.t1 | MTR_2g078770 | 62.376 | 101 | 38 | 0 | 132 | 232 | 43 | 143 | 1.82e-36 | 127 |
| MS.gene050361.t1 | MTR_8g463140 | 70.588 | 85 | 25 | 0 | 146 | 230 | 64 | 148 | 1.34e-35 | 125 |
| MS.gene050361.t1 | MTR_8g005960 | 42.051 | 195 | 90 | 6 | 47 | 221 | 70 | 261 | 5.42e-35 | 127 |
| MS.gene050361.t1 | MTR_8g096780 | 58.511 | 94 | 39 | 0 | 133 | 226 | 85 | 178 | 1.43e-33 | 125 |
| MS.gene050361.t1 | MTR_4g088555 | 64.368 | 87 | 31 | 0 | 135 | 221 | 51 | 137 | 1.88e-33 | 119 |
| MS.gene050361.t1 | MTR_5g046670 | 61.798 | 89 | 34 | 0 | 132 | 220 | 229 | 317 | 3.78e-33 | 125 |
| MS.gene050361.t1 | MTR_1g086250 | 98.333 | 60 | 1 | 0 | 194 | 253 | 2 | 61 | 3.88e-33 | 127 |
| MS.gene050361.t1 | MTR_2g461920 | 64.773 | 88 | 31 | 0 | 133 | 220 | 157 | 244 | 6.96e-33 | 125 |
| MS.gene050361.t1 | MTR_2g014200 | 63.043 | 92 | 33 | 1 | 133 | 224 | 51 | 141 | 1.12e-32 | 116 |
| MS.gene050361.t1 | MTR_7g444860 | 60.000 | 90 | 36 | 0 | 137 | 226 | 139 | 228 | 1.70e-32 | 120 |
| MS.gene050361.t1 | MTR_4g109770 | 64.773 | 88 | 28 | 1 | 133 | 220 | 112 | 196 | 1.30e-31 | 121 |
| MS.gene050361.t1 | MTR_3g085180 | 56.842 | 95 | 41 | 0 | 132 | 226 | 150 | 244 | 4.20e-31 | 119 |
| MS.gene050361.t1 | MTR_3g099080 | 48.361 | 122 | 60 | 2 | 133 | 251 | 83 | 204 | 1.17e-30 | 117 |
| MS.gene050361.t1 | MTR_7g028740 | 57.447 | 94 | 39 | 1 | 133 | 226 | 64 | 156 | 2.60e-30 | 116 |
| MS.gene050361.t1 | MTR_1g053715 | 65.432 | 81 | 28 | 0 | 140 | 220 | 67 | 147 | 4.97e-30 | 115 |
| MS.gene050361.t1 | MTR_7g092930 | 63.750 | 80 | 29 | 0 | 147 | 226 | 68 | 147 | 9.95e-30 | 114 |
| MS.gene050361.t1 | MTR_8g080690 | 54.255 | 94 | 43 | 0 | 132 | 225 | 136 | 229 | 1.51e-27 | 108 |
| MS.gene050361.t1 | MTR_8g080680 | 56.250 | 80 | 35 | 0 | 147 | 226 | 132 | 211 | 1.21e-24 | 101 |
| MS.gene050361.t1 | MTR_8g080670 | 57.333 | 75 | 32 | 0 | 145 | 219 | 160 | 234 | 9.81e-23 | 96.3 |
| MS.gene050361.t1 | MTR_2g020620 | 52.308 | 65 | 31 | 0 | 156 | 220 | 99 | 163 | 2.28e-17 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050361.t1 | AT2G47070 | 57.258 | 248 | 62 | 8 | 6 | 253 | 8 | 211 | 8.78e-74 | 241 |
| MS.gene050361.t1 | AT3G60030 | 53.815 | 249 | 78 | 7 | 16 | 253 | 11 | 233 | 6.73e-73 | 239 |
| MS.gene050361.t1 | AT1G20980 | 58.915 | 129 | 45 | 2 | 130 | 250 | 103 | 231 | 3.61e-42 | 153 |
| MS.gene050361.t1 | AT1G76580 | 39.224 | 232 | 82 | 7 | 30 | 252 | 40 | 221 | 2.84e-39 | 144 |
| MS.gene050361.t1 | AT1G76580 | 39.224 | 232 | 82 | 7 | 30 | 252 | 40 | 221 | 3.30e-39 | 144 |
| MS.gene050361.t1 | AT1G76580 | 39.224 | 232 | 82 | 7 | 30 | 252 | 40 | 221 | 9.91e-39 | 143 |
| MS.gene050361.t1 | AT2G47070 | 78.313 | 83 | 17 | 1 | 171 | 253 | 1 | 82 | 1.09e-36 | 137 |
| MS.gene050361.t1 | AT2G33810 | 65.060 | 83 | 29 | 0 | 140 | 222 | 47 | 129 | 6.91e-35 | 122 |
| MS.gene050361.t1 | AT1G69170 | 61.458 | 96 | 37 | 0 | 132 | 227 | 109 | 204 | 1.16e-34 | 128 |
| MS.gene050361.t1 | AT1G02065 | 69.620 | 79 | 24 | 0 | 147 | 225 | 188 | 266 | 1.76e-33 | 124 |
| MS.gene050361.t1 | AT1G53160 | 51.181 | 127 | 47 | 3 | 134 | 245 | 35 | 161 | 5.83e-33 | 118 |
| MS.gene050361.t1 | AT1G53160 | 51.181 | 127 | 47 | 3 | 134 | 245 | 35 | 161 | 5.83e-33 | 118 |
| MS.gene050361.t1 | AT1G53160 | 66.667 | 81 | 27 | 0 | 146 | 226 | 53 | 133 | 6.64e-33 | 118 |
| MS.gene050361.t1 | AT3G15270 | 58.163 | 98 | 38 | 1 | 136 | 230 | 49 | 146 | 8.75e-33 | 118 |
| MS.gene050361.t1 | AT5G43270 | 56.701 | 97 | 42 | 0 | 147 | 243 | 169 | 265 | 4.20e-31 | 119 |
| MS.gene050361.t1 | AT5G43270 | 56.701 | 97 | 42 | 0 | 147 | 243 | 169 | 265 | 4.20e-31 | 119 |
| MS.gene050361.t1 | AT5G43270 | 56.701 | 97 | 42 | 0 | 147 | 243 | 169 | 265 | 4.20e-31 | 119 |
| MS.gene050361.t1 | AT5G50670 | 55.319 | 94 | 40 | 1 | 140 | 233 | 94 | 185 | 4.49e-31 | 118 |
| MS.gene050361.t1 | AT5G50670 | 55.319 | 94 | 40 | 1 | 140 | 233 | 94 | 185 | 4.49e-31 | 118 |
| MS.gene050361.t1 | AT5G50570 | 55.319 | 94 | 40 | 1 | 140 | 233 | 94 | 185 | 4.49e-31 | 118 |
| MS.gene050361.t1 | AT5G50570 | 55.319 | 94 | 40 | 1 | 140 | 233 | 94 | 185 | 4.49e-31 | 118 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.15e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27370 | 50.450 | 111 | 51 | 2 | 110 | 220 | 143 | 249 | 1.81e-30 | 117 |
| MS.gene050361.t1 | AT1G27360 | 50.450 | 111 | 50 | 2 | 110 | 220 | 143 | 248 | 7.46e-29 | 112 |
| MS.gene050361.t1 | AT1G27360 | 50.450 | 111 | 50 | 2 | 110 | 220 | 143 | 248 | 7.46e-29 | 112 |
| MS.gene050361.t1 | AT1G27360 | 50.450 | 111 | 50 | 2 | 110 | 220 | 143 | 248 | 7.46e-29 | 112 |
| MS.gene050361.t1 | AT1G27360 | 50.450 | 111 | 50 | 2 | 110 | 220 | 143 | 248 | 7.46e-29 | 112 |
| MS.gene050361.t1 | AT3G57920 | 65.000 | 80 | 28 | 0 | 141 | 220 | 53 | 132 | 5.94e-28 | 109 |
| MS.gene050361.t1 | AT2G42200 | 61.250 | 80 | 31 | 0 | 147 | 226 | 74 | 153 | 7.79e-28 | 109 |
| MS.gene050361.t1 | AT5G18830 | 54.545 | 88 | 39 | 1 | 133 | 220 | 125 | 211 | 7.35e-24 | 100 |
| MS.gene050361.t1 | AT5G18830 | 54.545 | 88 | 39 | 1 | 133 | 220 | 125 | 211 | 7.47e-24 | 100 |
| MS.gene050361.t1 | AT5G18830 | 54.545 | 88 | 39 | 1 | 133 | 220 | 125 | 211 | 7.71e-24 | 100 |
| MS.gene050361.t1 | AT1G02065 | 68.750 | 48 | 15 | 0 | 147 | 194 | 188 | 235 | 5.30e-17 | 78.2 |
Find 73 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATCTTGAGAAAGGGAATA+AGG | 0.299596 | 1.2:+64974932 | MS.gene050361:CDS |
| GGGAATGGAATTTGAATGAT+TGG | 0.316466 | 1.2:+64974760 | MS.gene050361:CDS |
| GCACTTAGCTTAAATCTTGC+AGG | 0.340035 | 1.2:+64975017 | MS.gene050361:CDS |
| TCATTTGTTGGACTTCCATT+AGG | 0.355984 | 1.2:-64976669 | None:intergenic |
| AGTTTGTGAGATGCATTCTA+AGG | 0.361547 | 1.2:+64975175 | MS.gene050361:CDS |
| CCCACTCCGGTCTGGGATCC+CGG | 0.362139 | 1.2:+64974863 | MS.gene050361:CDS |
| AATCAAGAAGCTGTTCCTAA+TGG | 0.397811 | 1.2:+64976654 | MS.gene050361:CDS |
| CTAGTCTGATCATCATTTGT+TGG | 0.400423 | 1.2:-64976681 | None:intergenic |
| AGATGCATTCTAAGGCTAGT+AGG | 0.412881 | 1.2:+64975183 | MS.gene050361:CDS |
| TCATCTGATTTGAGTGGGAT+GGG | 0.427804 | 1.2:+64974726 | MS.gene050361:CDS |
| TTCATCTGATTTGAGTGGGA+TGG | 0.429528 | 1.2:+64974725 | MS.gene050361:CDS |
| CGGTCTGGGATCCCGGTGGT+TGG | 0.446088 | 1.2:+64974870 | MS.gene050361:CDS |
| AGCTGTCGAAGACGCTTGGC+TGG | 0.450145 | 1.2:+64976606 | MS.gene050361:CDS |
| GTGATTATGGGGACAAGGTT+GGG | 0.452888 | 1.2:+64974669 | None:intergenic |
| TTCGAATCGAGCTGTCTGTC+AGG | 0.452984 | 1.2:+64975097 | MS.gene050361:CDS |
| GTGGGATGGGGAGGAGGTCA+AGG | 0.453462 | 1.2:+64974739 | MS.gene050361:CDS |
| TATAGCTAGCCGTGTGAATC+CGG | 0.453788 | 1.2:+64974803 | MS.gene050361:CDS |
| TCTGGGATCCCGGTGGTTGG+AGG | 0.462646 | 1.2:+64974873 | MS.gene050361:CDS |
| TTTCCGTCCCTTTCCACAGC+CGG | 0.462810 | 1.2:-64975050 | None:intergenic |
| CATCTGATTTGAGTGGGATG+GGG | 0.463932 | 1.2:+64974727 | MS.gene050361:CDS |
| CGCAAACTGTCCGCCTGCAC+CGG | 0.466508 | 1.2:-64974822 | None:intergenic |
| ATAAGGAAGGGGATAGGAAA+AGG | 0.467611 | 1.2:+64974949 | MS.gene050361:CDS |
| AAGGGAATAAGGAAGGGGAT+AGG | 0.469713 | 1.2:+64974943 | MS.gene050361:CDS |
| ATTTGAGTGGGATGGGGAGG+AGG | 0.473356 | 1.2:+64974733 | MS.gene050361:CDS |
| CTTGAGAAAGGGAATAAGGA+AGG | 0.476247 | 1.2:+64974936 | MS.gene050361:CDS |
| TGGGGAGGAGGTCAAGGGAA+TGG | 0.478218 | 1.2:+64974745 | MS.gene050361:CDS |
| TGTGATTATGGGGACAAGGT+TGG | 0.482793 | 1.2:+64974668 | None:intergenic |
| AGGACATGTTTCACCGGCTG+TGG | 0.490256 | 1.2:+64975037 | MS.gene050361:CDS |
| TGTTTCACCGGCTGTGGAAA+GGG | 0.493285 | 1.2:+64975043 | MS.gene050361:CDS |
| TAAGGCTAGTAGGGCTCTTG+TGG | 0.497571 | 1.2:+64975193 | MS.gene050361:CDS |
| GGAATTTGAATGATTGGAGA+TGG | 0.498797 | 1.2:+64974766 | MS.gene050361:CDS |
| GAGAAGCTGTCGAAGACGCT+TGG | 0.511016 | 1.2:+64976602 | MS.gene050361:CDS |
| GAGGAAGGAGATCTTGAGAA+AGG | 0.514583 | 1.2:+64974924 | MS.gene050361:CDS |
| GTGGTTCATCTGATTTGAGT+GGG | 0.514851 | 1.2:+64974721 | MS.gene050361:CDS |
| GGAGCATGAAGAAGACGTAT+TGG | 0.515867 | 1.2:-64974901 | None:intergenic |
| TAGCCGTGTGAATCCGGTGC+AGG | 0.517976 | 1.2:+64974809 | MS.gene050361:CDS |
| ATGTTTCACCGGCTGTGGAA+AGG | 0.521156 | 1.2:+64975042 | MS.gene050361:CDS |
| TTTCTCAAGATCTCCTTCCT+CGG | 0.522636 | 1.2:-64974922 | None:intergenic |
| CAACCACCGGGATCCCAGAC+CGG | 0.527167 | 1.2:-64974869 | None:intergenic |
| GAAAAGGAGAGTTATTGTGC+TGG | 0.529228 | 1.2:+64974965 | MS.gene050361:CDS |
| CCGGGATCCCAGACCGGAGT+GGG | 0.530624 | 1.2:-64974863 | None:intergenic |
| GCTTGGCTGGCCATAACAAA+CGG | 0.533402 | 1.2:+64976619 | MS.gene050361:CDS |
| GAATTTGAATGATTGGAGAT+GGG | 0.536595 | 1.2:+64974767 | MS.gene050361:CDS |
| GTTATTGTGCTGGAAGATGA+TGG | 0.539294 | 1.2:+64974975 | MS.gene050361:CDS |
| CTGATTTGAGTGGGATGGGG+AGG | 0.540249 | 1.2:+64974730 | MS.gene050361:CDS |
| AGGAAGGAGATCTTGAGAAA+GGG | 0.547901 | 1.2:+64974925 | MS.gene050361:CDS |
| TTGGACGAACCTCCAACCAC+CGG | 0.551797 | 1.2:-64974882 | None:intergenic |
| TGAGAAAGGGAATAAGGAAG+GGG | 0.552930 | 1.2:+64974938 | MS.gene050361:CDS |
| GATGCATTCTAAGGCTAGTA+GGG | 0.556125 | 1.2:+64975184 | MS.gene050361:CDS |
| TGGGATGGGGAGGAGGTCAA+GGG | 0.558672 | 1.2:+64974740 | MS.gene050361:CDS |
| TCTTCTTCATGCTCCGAGGA+AGG | 0.558761 | 1.2:+64974909 | MS.gene050361:CDS |
| TTGAATGATTGGAGATGGGA+TGG | 0.559506 | 1.2:+64974771 | MS.gene050361:CDS |
| AAGGCTAGTAGGGCTCTTGT+GGG | 0.562216 | 1.2:+64975194 | MS.gene050361:CDS |
| ATACTTCAAGAGTTCGATGA+AGG | 0.564195 | 1.2:+64976576 | MS.gene050361:CDS |
| CCGTGTGAATCCGGTGCAGG+CGG | 0.583777 | 1.2:+64974812 | MS.gene050361:CDS |
| TGCAGATCTGAGTAGAGGTA+AGG | 0.583887 | 1.2:+64975133 | MS.gene050361:CDS |
| TTGAGAAAGGGAATAAGGAA+GGG | 0.585696 | 1.2:+64974937 | MS.gene050361:CDS |
| GGTGGTTCATCTGATTTGAG+TGG | 0.587139 | 1.2:+64974720 | MS.gene050361:CDS |
| TCTTGCAGGACATGTTTCAC+CGG | 0.602620 | 1.2:+64975031 | MS.gene050361:CDS |
| TGGACGAACCTCCAACCACC+GGG | 0.606579 | 1.2:-64974881 | None:intergenic |
| GCAGGCGGACAGTTTGCGAG+TGG | 0.611585 | 1.2:+64974827 | MS.gene050361:CDS |
| CAGGCGGACAGTTTGCGAGT+GGG | 0.612302 | 1.2:+64974828 | MS.gene050361:CDS |
| GTCTGTCAGGTTGAAGACTG+TGG | 0.617577 | 1.2:+64975110 | MS.gene050361:CDS |
| CTGGCCATAACAAACGGAGA+AGG | 0.618872 | 1.2:+64976625 | MS.gene050361:CDS |
| TCACCGGCTGTGGAAAGGGA+CGG | 0.619862 | 1.2:+64975047 | MS.gene050361:CDS |
| TTGTGGGAAATGCAATGCAG+AGG | 0.630557 | 1.2:+64975210 | MS.gene050361:CDS |
| GAATTGTGATTATGGGGACA+AGG | 0.639382 | 1.2:+64974664 | None:intergenic |
| CCGCCTGCACCGGATTCACA+CGG | 0.640950 | 1.2:-64974812 | None:intergenic |
| GATGGTTTGAATGATGAAGC+TGG | 0.645206 | 1.2:+64974993 | MS.gene050361:CDS |
| TACGTCTTCTTCATGCTCCG+AGG | 0.664152 | 1.2:+64974905 | MS.gene050361:CDS |
| ACCGGGATCCCAGACCGGAG+TGG | 0.666079 | 1.2:-64974864 | None:intergenic |
| TGTGGTGCAGATCTGAGTAG+AGG | 0.668323 | 1.2:+64975128 | MS.gene050361:CDS |
| ACTCCGGTCTGGGATCCCGG+TGG | 0.685385 | 1.2:+64974866 | MS.gene050361:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACAAAATTATTGAATAA+AGG | - | chr1.2:64976448-64976467 | None:intergenic | 10.0% |
| !!! | TATTAAGTATGATTTTTTTA+AGG | + | chr1.2:64976164-64976183 | MS.gene050361:intron | 10.0% |
| !!! | TTTTGTATTAATTTTTATGT+AGG | + | chr1.2:64976459-64976478 | MS.gene050361:intron | 10.0% |
| !! | AATTAACATTAATGTTTCAT+TGG | + | chr1.2:64976072-64976091 | MS.gene050361:intron | 15.0% |
| !! | TAAAAAATTAAAGGATAACA+AGG | - | chr1.2:64975813-64975832 | None:intergenic | 15.0% |
| !! | TAAATAGTTAAGGATATAAT+AGG | + | chr1.2:64976047-64976066 | MS.gene050361:intron | 15.0% |
| !! | ATTAAAAAAACGAAAGAGTT+TGG | - | chr1.2:64975736-64975755 | None:intergenic | 20.0% |
| !! | CGCATATAAAATTAATTACA+TGG | - | chr1.2:64975937-64975956 | None:intergenic | 20.0% |
| !! | GAATAATCAGTGTAAAATTA+GGG | + | chr1.2:64975589-64975608 | MS.gene050361:intron | 20.0% |
| !! | TAAAAATCCATCATGATATT+AGG | - | chr1.2:64976417-64976436 | None:intergenic | 20.0% |
| !! | TGAATAATCAGTGTAAAATT+AGG | + | chr1.2:64975588-64975607 | MS.gene050361:intron | 20.0% |
| !! | TTAAAAAAACGAAAGAGTTT+GGG | - | chr1.2:64975735-64975754 | None:intergenic | 20.0% |
| !!! | AATTATCATTTTTATGGTGT+TGG | + | chr1.2:64974699-64974718 | MS.gene050361:CDS | 20.0% |
| !!! | ATTTATAACCTGATTTTGAT+GGG | + | chr1.2:64975855-64975874 | MS.gene050361:intron | 20.0% |
| !!! | GCTGAAAATTATCATTTTTA+TGG | + | chr1.2:64974693-64974712 | MS.gene050361:CDS | 20.0% |
| !!! | TTCAGATATTGATTACATTT+TGG | - | chr1.2:64975356-64975375 | None:intergenic | 20.0% |
| ! | ACAAAATTGCCCTTAATAAA+TGG | + | chr1.2:64975980-64975999 | MS.gene050361:intron | 25.0% |
| ! | GAGAGAGTAATAAATAGTTA+AGG | + | chr1.2:64976037-64976056 | MS.gene050361:intron | 25.0% |
| ! | GAGTATTTATTGTATCTTGT+TGG | + | chr1.2:64976239-64976258 | MS.gene050361:intron | 25.0% |
| ! | TGTAAAGCGACATATAATTT+GGG | + | chr1.2:64976098-64976117 | MS.gene050361:intron | 25.0% |
| ! | TTGTAAAGCGACATATAATT+TGG | + | chr1.2:64976097-64976116 | MS.gene050361:intron | 25.0% |
| ! | TTTCAAAGCGACATATAATT+GGG | + | chr1.2:64976131-64976150 | MS.gene050361:intron | 25.0% |
| ! | TTTGCCATACCATTTATTAA+GGG | - | chr1.2:64975992-64976011 | None:intergenic | 25.0% |
| !! | CATTTATAACCTGATTTTGA+TGG | + | chr1.2:64975854-64975873 | MS.gene050361:intron | 25.0% |
| !! | TTTTCAAAGCGACATATAAT+TGG | + | chr1.2:64976130-64976149 | MS.gene050361:intron | 25.0% |
| !! | TTTTGCCATACCATTTATTA+AGG | - | chr1.2:64975993-64976012 | None:intergenic | 25.0% |
| !!! | ATATTGATTACATTTTGGAG+CGG | - | chr1.2:64975351-64975370 | None:intergenic | 25.0% |
| AAAATTGGGTTTGTCTAACT+GGG | + | chr1.2:64975646-64975665 | MS.gene050361:intron | 30.0% | |
| AAACGTTAGATAATTTGGGA+CGG | - | chr1.2:64975911-64975930 | None:intergenic | 30.0% | |
| AACAGAAAGCAATCAATAAG+AGG | - | chr1.2:64975267-64975286 | None:intergenic | 30.0% | |
| AATACTGCCTAATATCATGA+TGG | + | chr1.2:64976407-64976426 | MS.gene050361:intron | 30.0% | |
| ATTAAAGGATAACAAGGACT+TGG | - | chr1.2:64975807-64975826 | None:intergenic | 30.0% | |
| ATTGCCCTTAATAAATGGTA+TGG | + | chr1.2:64975985-64976004 | MS.gene050361:intron | 30.0% | |
| CTGAAAATCTATGTTGTTGA+TGG | + | chr1.2:64975371-64975390 | MS.gene050361:intron | 30.0% | |
| GAATTTGAATGATTGGAGAT+GGG | + | chr1.2:64974767-64974786 | MS.gene050361:CDS | 30.0% | |
| GCCAAAACGTTAGATAATTT+GGG | - | chr1.2:64975915-64975934 | None:intergenic | 30.0% | |
| TAAAATATGCTACAGCAGTA+TGG | - | chr1.2:64976323-64976342 | None:intergenic | 30.0% | |
| TTATATAGAGAGATCTCACA+TGG | - | chr1.2:64975516-64975535 | None:intergenic | 30.0% | |
| ! | ATACTGCTGTAGCATATTTT+AGG | + | chr1.2:64976322-64976341 | MS.gene050361:intron | 30.0% |
| ! | TCCCAAATTATCTAACGTTT+TGG | + | chr1.2:64975911-64975930 | MS.gene050361:intron | 30.0% |
| !! | GCTAACTTGTTAATAACAGA+TGG | - | chr1.2:64976365-64976384 | None:intergenic | 30.0% |
| !! | GTTGATAGTTATGTGTGTAT+AGG | + | chr1.2:64975296-64975315 | MS.gene050361:intron | 30.0% |
| !! | TATCATTTTTATGGTGTTGG+TGG | + | chr1.2:64974702-64974721 | MS.gene050361:CDS | 30.0% |
| !!! | ATATTTTAGGTTTGGTGCTA+TGG | + | chr1.2:64976335-64976354 | MS.gene050361:intron | 30.0% |
| !!! | ATTGCTTTCTGTTTTTGCTT+TGG | + | chr1.2:64975274-64975293 | MS.gene050361:intron | 30.0% |
| !!! | TATTTTAGGTTTGGTGCTAT+GGG | + | chr1.2:64976336-64976355 | MS.gene050361:intron | 30.0% |
| AAAGCGACATATAATTGGGA+CGG | + | chr1.2:64976135-64976154 | MS.gene050361:intron | 35.0% | |
| AAGTATGTGAAACCTGTTGA+TGG | - | chr1.2:64976562-64976581 | None:intergenic | 35.0% | |
| AATCAAGAAGCTGTTCCTAA+TGG | + | chr1.2:64976654-64976673 | MS.gene050361:CDS | 35.0% | |
| AGATCTTGAGAAAGGGAATA+AGG | + | chr1.2:64974932-64974951 | MS.gene050361:CDS | 35.0% | |
| AGTATGTGAAACCTGTTGAT+GGG | - | chr1.2:64976561-64976580 | None:intergenic | 35.0% | |
| AGTTTGTGAGATGCATTCTA+AGG | + | chr1.2:64975175-64975194 | MS.gene050361:CDS | 35.0% | |
| ATACTTCAAGAGTTCGATGA+AGG | + | chr1.2:64976576-64976595 | MS.gene050361:CDS | 35.0% | |
| CAAAATTGGGTTTGTCTAAC+TGG | + | chr1.2:64975645-64975664 | MS.gene050361:intron | 35.0% | |
| CTAGTCTGATCATCATTTGT+TGG | - | chr1.2:64976684-64976703 | None:intergenic | 35.0% | |
| GGAATTTGAATGATTGGAGA+TGG | + | chr1.2:64974766-64974785 | MS.gene050361:CDS | 35.0% | |
| GGCCAAAACGTTAGATAATT+TGG | - | chr1.2:64975916-64975935 | None:intergenic | 35.0% | |
| GGGAATGGAATTTGAATGAT+TGG | + | chr1.2:64974760-64974779 | MS.gene050361:CDS | 35.0% | |
| TTGAGAAAGGGAATAAGGAA+GGG | + | chr1.2:64974937-64974956 | MS.gene050361:CDS | 35.0% | |
| ! | TCATTTGTTGGACTTCCATT+AGG | - | chr1.2:64976672-64976691 | None:intergenic | 35.0% |
| !! | TAACCTGATTTTGATGGGAA+TGG | + | chr1.2:64975860-64975879 | MS.gene050361:intron | 35.0% |
| !! | TTTTCCTTCTCCGTTTGTTA+TGG | - | chr1.2:64976632-64976651 | None:intergenic | 35.0% |
| !!! | GCTGTAGCATATTTTAGGTT+TGG | + | chr1.2:64976327-64976346 | MS.gene050361:intron | 35.0% |
| AATATGCTACAGCAGTATGG+CGG | - | chr1.2:64976320-64976339 | None:intergenic | 40.0% | |
| AGGAAGGAGATCTTGAGAAA+GGG | + | chr1.2:64974925-64974944 | MS.gene050361:CDS | 40.0% | |
| ATAACCCTCCTCAGGAAAAT+TGG | - | chr1.2:64975694-64975713 | None:intergenic | 40.0% | |
| ATAAGGAAGGGGATAGGAAA+AGG | + | chr1.2:64974949-64974968 | MS.gene050361:CDS | 40.0% | |
| CATGGCAAACTTTCGAACAA+TGG | - | chr1.2:64975498-64975517 | None:intergenic | 40.0% | |
| CTTGAGAAAGGGAATAAGGA+AGG | + | chr1.2:64974936-64974955 | MS.gene050361:CDS | 40.0% | |
| GAAAAGGAGAGTTATTGTGC+TGG | + | chr1.2:64974965-64974984 | MS.gene050361:CDS | 40.0% | |
| GATGGTTTGAATGATGAAGC+TGG | + | chr1.2:64974993-64975012 | MS.gene050361:CDS | 40.0% | |
| GCACTTAGCTTAAATCTTGC+AGG | + | chr1.2:64975017-64975036 | MS.gene050361:CDS | 40.0% | |
| GTATGTGAAACCTGTTGATG+GGG | - | chr1.2:64976560-64976579 | None:intergenic | 40.0% | |
| GTTATTGTGCTGGAAGATGA+TGG | + | chr1.2:64974975-64974994 | MS.gene050361:CDS | 40.0% | |
| TAACCCTCCTCAGGAAAATT+GGG | - | chr1.2:64975693-64975712 | None:intergenic | 40.0% | |
| TGAGAAAGGGAATAAGGAAG+GGG | + | chr1.2:64974938-64974957 | MS.gene050361:CDS | 40.0% | |
| TGTCCATTCCCATCAAAATC+AGG | - | chr1.2:64975866-64975885 | None:intergenic | 40.0% | |
| TTGAATGATTGGAGATGGGA+TGG | + | chr1.2:64974771-64974790 | MS.gene050361:CDS | 40.0% | |
| TTTCTCAAGATCTCCTTCCT+CGG | - | chr1.2:64974925-64974944 | None:intergenic | 40.0% | |
| ! | ACAAACCCAATTTTGCACCA+GGG | - | chr1.2:64975640-64975659 | None:intergenic | 40.0% |
| ! | AGCGAGCATAGTTTGTATGT+CGG | - | chr1.2:64975566-64975585 | None:intergenic | 40.0% |
| ! | ATTTTCCTGAGGAGGGTTAT+TGG | + | chr1.2:64975694-64975713 | MS.gene050361:intron | 40.0% |
| ! | CATTCTTTTACCCCATCAAC+AGG | + | chr1.2:64976547-64976566 | MS.gene050361:intron | 40.0% |
| ! | GTGGTTCATCTGATTTGAGT+GGG | + | chr1.2:64974721-64974740 | MS.gene050361:CDS | 40.0% |
| ! | GTTAGATAATTTGGGACGGA+GGG | - | chr1.2:64975907-64975926 | None:intergenic | 40.0% |
| ! | TCATCTGATTTGAGTGGGAT+GGG | + | chr1.2:64974726-64974745 | MS.gene050361:CDS | 40.0% |
| ! | TTCATCTGATTTGAGTGGGA+TGG | + | chr1.2:64974725-64974744 | MS.gene050361:CDS | 40.0% |
| !! | AGATGCATTCTAAGGCTAGT+AGG | + | chr1.2:64975183-64975202 | MS.gene050361:CDS | 40.0% |
| !! | GATGCATTCTAAGGCTAGTA+GGG | + | chr1.2:64975184-64975203 | MS.gene050361:CDS | 40.0% |
| !! | GGTTTTGTCAACAGTGTAGT+AGG | + | chr1.2:64975231-64975250 | MS.gene050361:CDS | 40.0% |
| AAAAAGAGCAGAGTAGCTGG+AGG | + | chr1.2:64975071-64975090 | MS.gene050361:CDS | 45.0% | |
| AAACGAAAGAGTTTGGGCTG+TGG | - | chr1.2:64975729-64975748 | None:intergenic | 45.0% | |
| AACGAAAGAGTTTGGGCTGT+GGG | - | chr1.2:64975728-64975747 | None:intergenic | 45.0% | |
| AAGGGAATAAGGAAGGGGAT+AGG | + | chr1.2:64974943-64974962 | MS.gene050361:CDS | 45.0% | |
| ACTACACTATTCCGCTATCG+CGG | - | chr1.2:64975399-64975418 | None:intergenic | 45.0% | |
| CGACATATAATTGGGACGGA+GGG | + | chr1.2:64976139-64976158 | MS.gene050361:intron | 45.0% | |
| GAGGAAGGAGATCTTGAGAA+AGG | + | chr1.2:64974924-64974943 | MS.gene050361:CDS | 45.0% | |
| GGAAAAAAGAGCAGAGTAGC+TGG | + | chr1.2:64975068-64975087 | MS.gene050361:CDS | 45.0% | |
| GGAGCATGAAGAAGACGTAT+TGG | - | chr1.2:64974904-64974923 | None:intergenic | 45.0% | |
| TATAGCTAGCCGTGTGAATC+CGG | + | chr1.2:64974803-64974822 | MS.gene050361:CDS | 45.0% | |
| TCTTGCAGGACATGTTTCAC+CGG | + | chr1.2:64975031-64975050 | MS.gene050361:CDS | 45.0% | |
| TGCAGATCTGAGTAGAGGTA+AGG | + | chr1.2:64975133-64975152 | MS.gene050361:CDS | 45.0% | |
| TGGGTCAGGGTTTGAAGAAA+TGG | + | chr1.2:64975418-64975437 | MS.gene050361:intron | 45.0% | |
| TTCGAACAATGGCACATTGC+AGG | - | chr1.2:64975487-64975506 | None:intergenic | 45.0% | |
| TTGTGGGAAATGCAATGCAG+AGG | + | chr1.2:64975210-64975229 | MS.gene050361:CDS | 45.0% | |
| ! | CATCTGATTTGAGTGGGATG+GGG | + | chr1.2:64974727-64974746 | MS.gene050361:CDS | 45.0% |
| ! | CGTTAGATAATTTGGGACGG+AGG | - | chr1.2:64975908-64975927 | None:intergenic | 45.0% |
| ! | GACAAACCCAATTTTGCACC+AGG | - | chr1.2:64975641-64975660 | None:intergenic | 45.0% |
| ! | GACAACAGTTTTTCCCACTC+CGG | + | chr1.2:64974850-64974869 | MS.gene050361:CDS | 45.0% |
| ! | GGTGGTTCATCTGATTTGAG+TGG | + | chr1.2:64974720-64974739 | MS.gene050361:CDS | 45.0% |
| ! | TCTCCCAATTTTCCTGAGGA+GGG | + | chr1.2:64975687-64975706 | MS.gene050361:intron | 45.0% |
| ! | TTCCTCTCCCAATTTTCCTG+AGG | + | chr1.2:64975683-64975702 | MS.gene050361:intron | 45.0% |
| !! | ACTGTTAGTCTTCGCAACAG+CGG | + | chr1.2:64976282-64976301 | MS.gene050361:intron | 45.0% |
| !! | CGATAGCGGAATAGTGTAGT+GGG | + | chr1.2:64975399-64975418 | MS.gene050361:intron | 45.0% |
| !! | AATTAGAATTAAAAAATTAA+AGG | - | chr1.2:64975822-64975841 | None:intergenic | 5.0% |
| AAGGCTAGTAGGGCTCTTGT+GGG | + | chr1.2:64975194-64975213 | MS.gene050361:CDS | 50.0% | |
| ACGCATCCCTGGTGCAAAAT+TGG | + | chr1.2:64975631-64975650 | MS.gene050361:intron | 50.0% | |
| CGCATCCCTGGTGCAAAATT+GGG | + | chr1.2:64975632-64975651 | MS.gene050361:intron | 50.0% | |
| CTCCTCAGGAAAATTGGGAG+AGG | - | chr1.2:64975688-64975707 | None:intergenic | 50.0% | |
| CTGGCCATAACAAACGGAGA+AGG | + | chr1.2:64976625-64976644 | MS.gene050361:CDS | 50.0% | |
| GCGACATATAATTGGGACGG+AGG | + | chr1.2:64976138-64976157 | MS.gene050361:intron | 50.0% | |
| GGAGAGGAACTGCACATGTT+TGG | - | chr1.2:64975672-64975691 | None:intergenic | 50.0% | |
| TAAGGCTAGTAGGGCTCTTG+TGG | + | chr1.2:64975193-64975212 | MS.gene050361:CDS | 50.0% | |
| TACGTCTTCTTCATGCTCCG+AGG | + | chr1.2:64974905-64974924 | MS.gene050361:CDS | 50.0% | |
| TCTTCGCAACAGCGGTTATC+CGG | + | chr1.2:64976290-64976309 | MS.gene050361:intron | 50.0% | |
| TCTTCTTCATGCTCCGAGGA+AGG | + | chr1.2:64974909-64974928 | MS.gene050361:CDS | 50.0% | |
| TGTGGTGCAGATCTGAGTAG+AGG | + | chr1.2:64975128-64975147 | MS.gene050361:CDS | 50.0% | |
| TTCGAATCGAGCTGTCTGTC+AGG | + | chr1.2:64975097-64975116 | MS.gene050361:CDS | 50.0% | |
| ! | AGTTTTTCCCACTCCGGTCT+GGG | + | chr1.2:64974856-64974875 | MS.gene050361:CDS | 50.0% |
| ! | ATGTTTCACCGGCTGTGGAA+AGG | + | chr1.2:64975042-64975061 | MS.gene050361:CDS | 50.0% |
| ! | ATTTTGCACCAGGGATGCGT+AGG | - | chr1.2:64975631-64975650 | None:intergenic | 50.0% |
| ! | CTCTCCCAATTTTCCTGAGG+AGG | + | chr1.2:64975686-64975705 | MS.gene050361:intron | 50.0% |
| ! | GCTTGGCTGGCCATAACAAA+CGG | + | chr1.2:64976619-64976638 | MS.gene050361:CDS | 50.0% |
| ! | TGTTTCACCGGCTGTGGAAA+GGG | + | chr1.2:64975043-64975062 | MS.gene050361:CDS | 50.0% |
| !! | CGGAATAGTGTAGTGGGTCA+GGG | + | chr1.2:64975405-64975424 | MS.gene050361:intron | 50.0% |
| !! | GCGATAGCGGAATAGTGTAG+TGG | + | chr1.2:64975398-64975417 | MS.gene050361:intron | 50.0% |
| !! | GTCTGTCAGGTTGAAGACTG+TGG | + | chr1.2:64975110-64975129 | MS.gene050361:CDS | 50.0% |
| ACAATGGCACATTGCAGGCG+CGG | - | chr1.2:64975482-64975501 | None:intergenic | 55.0% | |
| AGGGATGCGTAGGCTATGAC+AGG | - | chr1.2:64975621-64975640 | None:intergenic | 55.0% | |
| ATGTCGTGTGCAAGAGAGCG+AGG | - | chr1.2:64975444-64975463 | None:intergenic | 55.0% | |
| ATTTGAGTGGGATGGGGAGG+AGG | + | chr1.2:64974733-64974752 | MS.gene050361:CDS | 55.0% | |
| GAGAAGCTGTCGAAGACGCT+TGG | + | chr1.2:64976602-64976621 | MS.gene050361:CDS | 55.0% | |
| TGAGGCCAATAACCCTCCTC+AGG | - | chr1.2:64975702-64975721 | None:intergenic | 55.0% | |
| TGTCATAGCCTACGCATCCC+TGG | + | chr1.2:64975620-64975639 | MS.gene050361:intron | 55.0% | |
| TTGGACGAACCTCCAACCAC+CGG | - | chr1.2:64974885-64974904 | None:intergenic | 55.0% | |
| TTTCCGTCCCTTTCCACAGC+CGG | - | chr1.2:64975053-64975072 | None:intergenic | 55.0% | |
| ! | AGGACATGTTTCACCGGCTG+TGG | + | chr1.2:64975037-64975056 | MS.gene050361:CDS | 55.0% |
| ! | CAGTTTTTCCCACTCCGGTC+TGG | + | chr1.2:64974855-64974874 | MS.gene050361:CDS | 55.0% |
| ! | CTGATTTGAGTGGGATGGGG+AGG | + | chr1.2:64974730-64974749 | MS.gene050361:CDS | 55.0% |
| !! | ACAGCAGTATGGCGGATAGC+CGG | - | chr1.2:64976312-64976331 | None:intergenic | 55.0% |
| !! | GCGGAATAGTGTAGTGGGTC+AGG | + | chr1.2:64975404-64975423 | MS.gene050361:intron | 55.0% |
| AATGGCACATTGCAGGCGCG+GGG | - | chr1.2:64975480-64975499 | None:intergenic | 60.0% | |
| AGCTGTCGAAGACGCTTGGC+TGG | + | chr1.2:64976606-64976625 | MS.gene050361:CDS | 60.0% | |
| AGTTTGGGCTGTGGGTCGTG+AGG | - | chr1.2:64975720-64975739 | None:intergenic | 60.0% | |
| CAATGGCACATTGCAGGCGC+GGG | - | chr1.2:64975481-64975500 | None:intergenic | 60.0% | |
| CAGGCGGACAGTTTGCGAGT+GGG | + | chr1.2:64974828-64974847 | MS.gene050361:CDS | 60.0% | |
| TAGCCGTGTGAATCCGGTGC+AGG | + | chr1.2:64974809-64974828 | MS.gene050361:CDS | 60.0% | |
| TGGACGAACCTCCAACCACC+GGG | - | chr1.2:64974884-64974903 | None:intergenic | 60.0% | |
| TGGGATGGGGAGGAGGTCAA+GGG | + | chr1.2:64974740-64974759 | MS.gene050361:CDS | 60.0% | |
| TGGGGAGGAGGTCAAGGGAA+TGG | + | chr1.2:64974745-64974764 | MS.gene050361:CDS | 60.0% | |
| ! | TCACCGGCTGTGGAAAGGGA+CGG | + | chr1.2:64975047-64975066 | MS.gene050361:CDS | 60.0% |
| !! | TGTTGATGGCGCCGCGATAG+CGG | + | chr1.2:64975385-64975404 | MS.gene050361:intron | 60.0% |
| CAACCACCGGGATCCCAGAC+CGG | - | chr1.2:64974872-64974891 | None:intergenic | 65.0% | |
| CCGCCTGCACCGGATTCACA+CGG | - | chr1.2:64974815-64974834 | None:intergenic | 65.0% | |
| CCGTGTGAATCCGGTGCAGG+CGG | + | chr1.2:64974812-64974831 | MS.gene050361:CDS | 65.0% | |
| CGCAAACTGTCCGCCTGCAC+CGG | - | chr1.2:64974825-64974844 | None:intergenic | 65.0% | |
| GCAGGCGGACAGTTTGCGAG+TGG | + | chr1.2:64974827-64974846 | MS.gene050361:CDS | 65.0% | |
| GTGGGATGGGGAGGAGGTCA+AGG | + | chr1.2:64974739-64974758 | MS.gene050361:CDS | 65.0% | |
| ! | TCTGGGATCCCGGTGGTTGG+AGG | + | chr1.2:64974873-64974892 | MS.gene050361:CDS | 65.0% |
| ACATTGCAGGCGCGGGGAGG+GGG | - | chr1.2:64975474-64975493 | None:intergenic | 70.0% | |
| ACCGGGATCCCAGACCGGAG+TGG | - | chr1.2:64974867-64974886 | None:intergenic | 70.0% | |
| CACATTGCAGGCGCGGGGAG+GGG | - | chr1.2:64975475-64975494 | None:intergenic | 70.0% | |
| CCGGGATCCCAGACCGGAGT+GGG | - | chr1.2:64974866-64974885 | None:intergenic | 70.0% | |
| GCACATTGCAGGCGCGGGGA+GGG | - | chr1.2:64975476-64975495 | None:intergenic | 70.0% | |
| ! | ACTCCGGTCTGGGATCCCGG+TGG | + | chr1.2:64974866-64974885 | MS.gene050361:CDS | 70.0% |
| ! | CCCACTCCGGTCTGGGATCC+CGG | + | chr1.2:64974863-64974882 | MS.gene050361:CDS | 70.0% |
| ! | CGGTCTGGGATCCCGGTGGT+TGG | + | chr1.2:64974870-64974889 | MS.gene050361:CDS | 70.0% |
| GGCACATTGCAGGCGCGGGG+AGG | - | chr1.2:64975477-64975496 | None:intergenic | 75.0% | |
| ! | TTGCAGGCGCGGGGAGGGGG+AGG | - | chr1.2:64975471-64975490 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 64974675 | 64976750 | 64974675 | ID=MS.gene050361 |
| chr1.2 | mRNA | 64974675 | 64976750 | 64974675 | ID=MS.gene050361.t1;Parent=MS.gene050361 |
| chr1.2 | exon | 64974675 | 64975252 | 64974675 | ID=MS.gene050361.t1.exon1;Parent=MS.gene050361.t1 |
| chr1.2 | CDS | 64974675 | 64975252 | 64974675 | ID=cds.MS.gene050361.t1;Parent=MS.gene050361.t1 |
| chr1.2 | exon | 64976569 | 64976750 | 64976569 | ID=MS.gene050361.t1.exon2;Parent=MS.gene050361.t1 |
| chr1.2 | CDS | 64976569 | 64976750 | 64976569 | ID=cds.MS.gene050361.t1;Parent=MS.gene050361.t1 |
| Gene Sequence |
| Protein sequence |
