AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52264.t1 MTR_7g077670 96.894 322 10 0 1 322 1 322 0.0 650
MS.gene52264.t1 MTR_8g030880 75.710 317 76 1 2 317 1 317 0.0 511
MS.gene52264.t1 MTR_1g034140 33.762 311 185 8 10 306 26 329 2.83e-44 155
MS.gene52264.t1 MTR_2g083030 31.307 329 180 10 1 310 27 328 1.69e-39 142
MS.gene52264.t1 MTR_4g074130 33.969 262 154 8 10 262 39 290 5.47e-38 138
MS.gene52264.t1 MTR_5g005570 32.103 271 165 8 7 269 33 292 6.58e-38 137
MS.gene52264.t1 MTR_4g087110 30.000 320 192 10 11 306 26 337 7.71e-38 138
MS.gene52264.t1 MTR_4g011720 31.058 293 192 5 26 317 31 314 2.03e-37 136
MS.gene52264.t1 MTR_5g025090 31.379 290 182 5 11 296 5 281 2.49e-37 135
MS.gene52264.t1 MTR_7g451860 31.183 279 156 7 9 269 39 299 4.19e-37 135
MS.gene52264.t1 MTR_7g047670 31.183 279 156 7 9 269 39 299 4.19e-37 135
MS.gene52264.t1 MTR_4g087100 30.820 305 174 12 11 287 26 321 1.02e-36 135
MS.gene52264.t1 MTR_1g034120 30.061 326 188 13 11 307 26 340 2.81e-36 134
MS.gene52264.t1 MTR_4g087140 29.938 324 190 13 5 299 19 334 2.87e-36 134
MS.gene52264.t1 MTR_1g034060 30.303 330 182 13 11 307 26 340 1.18e-35 132
MS.gene52264.t1 MTR_4g011690 28.571 322 212 9 5 317 3 315 8.06e-35 129
MS.gene52264.t1 MTR_6g464620 32.803 314 179 11 10 302 63 365 9.30e-35 130
MS.gene52264.t1 MTR_4g087120 29.836 305 177 11 11 287 26 321 1.00e-34 129
MS.gene52264.t1 MTR_1g102070 32.484 314 178 10 11 302 59 360 1.63e-34 129
MS.gene52264.t1 MTR_8g033380 30.255 314 186 9 10 302 53 354 3.37e-34 129
MS.gene52264.t1 MTR_3g088745 29.338 317 202 8 2 302 27 337 2.04e-33 126
MS.gene52264.t1 MTR_4g087090 30.284 317 190 11 11 306 30 336 3.91e-33 125
MS.gene52264.t1 MTR_7g062550 31.399 293 187 9 9 294 58 343 7.82e-33 125
MS.gene52264.t1 MTR_1g011580 28.247 308 207 7 3 307 55 351 1.05e-32 124
MS.gene52264.t1 MTR_8g093930 26.814 317 210 9 1 302 37 346 1.66e-32 124
MS.gene52264.t1 MTR_2g102570 28.615 325 214 8 1 318 42 355 3.10e-32 123
MS.gene52264.t1 MTR_7g090520 27.891 294 197 7 11 295 10 297 7.58e-32 121
MS.gene52264.t1 MTR_2g070870 30.275 327 189 12 2 308 19 326 1.04e-31 121
MS.gene52264.t1 MTR_6g088665 27.778 324 200 7 2 299 12 327 1.78e-31 120
MS.gene52264.t1 MTR_3g096500 30.097 309 190 10 12 302 67 367 1.91e-31 121
MS.gene52264.t1 MTR_0009s0050 30.033 303 194 9 1 294 37 330 2.29e-31 120
MS.gene52264.t1 MTR_0009s0050 30.033 303 194 9 1 294 37 330 2.37e-31 120
MS.gene52264.t1 MTR_6g088665 27.692 325 200 7 2 299 12 328 2.60e-31 120
MS.gene52264.t1 MTR_5g027230 28.620 297 195 5 11 303 6 289 4.33e-31 119
MS.gene52264.t1 MTR_3g040410 31.579 304 180 10 11 300 6 295 4.57e-31 119
MS.gene52264.t1 MTR_7g062580 28.716 296 191 10 9 294 53 338 1.65e-30 119
MS.gene52264.t1 MTR_8g075830 29.394 330 204 9 10 322 38 355 2.20e-30 118
MS.gene52264.t1 MTR_1g081840 28.155 309 200 8 10 302 52 354 2.81e-30 118
MS.gene52264.t1 MTR_5g025050 28.767 292 187 5 11 296 5 281 8.69e-30 115
MS.gene52264.t1 MTR_4g021380 30.968 310 186 8 6 296 2 302 1.23e-29 115
MS.gene52264.t1 MTR_7g062570 29.592 294 191 11 9 294 53 338 1.30e-29 116
MS.gene52264.t1 MTR_8g009080 32.270 282 156 11 30 295 118 380 1.46e-29 117
MS.gene52264.t1 MTR_1g086550 30.363 303 181 9 11 292 20 313 3.53e-29 114
MS.gene52264.t1 MTR_1g070120 28.472 288 194 6 11 292 38 319 5.89e-29 114
MS.gene52264.t1 MTR_8g024120 28.966 290 180 10 11 287 42 318 1.16e-28 113
MS.gene52264.t1 MTR_4g123020 29.310 290 193 7 11 294 20 303 1.25e-28 112
MS.gene52264.t1 MTR_2g083000 31.273 275 156 10 10 269 32 288 2.70e-28 112
MS.gene52264.t1 MTR_3g108520 28.834 326 206 7 7 317 3 317 4.18e-28 111
MS.gene52264.t1 MTR_2g068960 31.190 311 170 10 11 296 63 354 5.58e-28 112
MS.gene52264.t1 MTR_2g069060 29.260 311 180 10 2 292 40 330 5.61e-28 111
MS.gene52264.t1 MTR_2g069090 29.642 307 175 12 11 295 68 355 6.23e-28 112
MS.gene52264.t1 MTR_3g045230 30.375 293 185 6 11 295 56 337 9.78e-28 111
MS.gene52264.t1 MTR_8g064200 32.281 285 167 13 1 272 42 313 1.12e-27 110
MS.gene52264.t1 MTR_2g019370 29.022 317 192 12 11 306 28 332 1.30e-27 110
MS.gene52264.t1 MTR_8g064200 32.281 285 167 13 1 272 47 318 1.42e-27 110
MS.gene52264.t1 MTR_4g100600 27.000 300 200 9 11 296 9 303 1.54e-27 110
MS.gene52264.t1 MTR_5g059130 30.233 301 177 9 10 293 43 327 2.07e-27 109
MS.gene52264.t1 MTR_8g009110 28.617 311 193 12 3 297 53 350 2.16e-27 110
MS.gene52264.t1 MTR_4g015790 26.073 303 203 8 4 292 55 350 2.48e-27 110
MS.gene52264.t1 MTR_8g102600 25.155 322 205 8 5 299 6 318 3.26e-27 108
MS.gene52264.t1 MTR_5g048470 32.155 283 170 12 1 272 43 314 3.58e-27 109
MS.gene52264.t1 MTR_5g024940 26.936 297 185 7 11 304 6 273 4.59e-27 107
MS.gene52264.t1 MTR_5g055680 29.139 302 196 10 2 294 38 330 4.66e-27 109
MS.gene52264.t1 MTR_5g055690 28.289 304 199 10 1 294 37 331 8.67e-27 108
MS.gene52264.t1 MTR_2g069190 29.470 302 181 10 11 295 68 354 1.09e-26 108
MS.gene52264.t1 MTR_1g070080 29.693 293 188 8 11 294 38 321 1.13e-26 107
MS.gene52264.t1 MTR_3g091350 28.750 320 200 10 9 312 57 364 1.87e-26 107
MS.gene52264.t1 MTR_5g065010 28.197 305 197 9 11 303 39 333 2.30e-26 107
MS.gene52264.t1 MTR_4g087130 27.815 302 186 8 11 287 26 320 2.81e-26 107
MS.gene52264.t1 MTR_3g464530 30.794 315 174 13 11 310 34 319 3.60e-26 106
MS.gene52264.t1 MTR_7g062600 29.693 293 193 9 9 294 49 335 5.33e-26 106
MS.gene52264.t1 MTR_4g021360 26.625 323 198 9 10 308 6 313 6.43e-26 105
MS.gene52264.t1 MTR_8g028435 29.097 299 191 8 11 297 60 349 7.46e-26 106
MS.gene52264.t1 MTR_5g048550 27.483 302 197 10 4 294 40 330 9.38e-26 105
MS.gene52264.t1 MTR_3g043900 29.492 295 184 8 11 295 56 336 1.29e-25 105
MS.gene52264.t1 MTR_3g070860 30.451 266 161 10 11 261 50 306 1.44e-25 105
MS.gene52264.t1 MTR_8g075890 28.244 262 170 6 10 260 38 292 2.12e-25 104
MS.gene52264.t1 MTR_2g068950 29.063 320 183 10 2 296 54 354 2.47e-25 104
MS.gene52264.t1 MTR_7g102720 28.710 310 172 9 7 293 33 316 2.98e-25 103
MS.gene52264.t1 MTR_2g437380 26.885 305 198 10 5 294 44 338 4.01e-25 103
MS.gene52264.t1 MTR_0328s0030 28.947 304 196 10 1 294 35 328 4.67e-25 103
MS.gene52264.t1 MTR_7g068650 26.752 314 184 10 8 296 51 343 5.43e-25 103
MS.gene52264.t1 MTR_7g045650 30.738 244 153 8 10 245 59 294 6.54e-25 102
MS.gene52264.t1 MTR_3g092890 26.224 286 201 6 11 292 38 317 6.92e-25 102
MS.gene52264.t1 MTR_5g048850 27.723 303 197 11 2 293 38 329 8.84e-25 102
MS.gene52264.t1 MTR_6g015950 27.740 292 188 8 5 285 33 312 1.10e-24 102
MS.gene52264.t1 MTR_3g072820 29.352 293 194 8 7 292 38 324 1.37e-24 102
MS.gene52264.t1 MTR_2g072890 27.213 305 202 10 1 294 42 337 1.41e-24 102
MS.gene52264.t1 MTR_0009s0480 30.483 269 169 9 1 260 36 295 1.56e-24 102
MS.gene52264.t1 MTR_2g069010 28.793 323 192 11 2 302 60 366 1.59e-24 102
MS.gene52264.t1 MTR_8g008930 28.990 307 178 13 11 295 60 348 1.62e-24 102
MS.gene52264.t1 MTR_5g048740 30.597 268 171 9 1 260 35 295 2.52e-24 101
MS.gene52264.t1 MTR_5g055900 26.821 302 203 9 2 294 38 330 3.28e-24 101
MS.gene52264.t1 MTR_8g093980 31.868 182 118 4 121 301 180 356 3.30e-24 101
MS.gene52264.t1 MTR_2g068840 29.392 296 190 9 10 293 54 342 3.34e-24 101
MS.gene52264.t1 MTR_1g011600 28.523 298 188 9 11 290 8 298 3.99e-24 100
MS.gene52264.t1 MTR_2g025120 27.333 300 184 13 12 295 5 286 4.81e-24 100
MS.gene52264.t1 MTR_5g085330 27.703 296 190 10 12 295 6 289 6.81e-24 99.8
MS.gene52264.t1 MTR_7g063730 27.036 307 190 9 9 298 62 351 8.63e-24 100
MS.gene52264.t1 MTR_8g009090 27.517 298 193 9 11 295 60 347 1.43e-23 99.8
MS.gene52264.t1 MTR_5g082750 29.474 285 171 11 11 274 49 324 1.59e-23 99.8
MS.gene52264.t1 MTR_3g091360 27.152 302 201 6 9 300 50 342 1.95e-23 99.4
MS.gene52264.t1 MTR_5g055820 27.124 306 198 12 1 293 37 330 2.62e-23 99.0
MS.gene52264.t1 MTR_2g033270 25.667 300 191 8 10 294 18 300 2.75e-23 98.2
MS.gene52264.t1 MTR_3g117420 28.571 315 194 14 5 301 46 347 4.25e-23 98.2
MS.gene52264.t1 MTR_0032s0040 27.517 298 198 8 11 298 70 359 4.41e-23 98.6
MS.gene52264.t1 MTR_1g070085 27.645 293 193 7 11 293 37 320 4.52e-23 98.2
MS.gene52264.t1 MTR_1g070085 27.645 293 193 7 11 293 37 320 4.52e-23 98.2
MS.gene52264.t1 MTR_7g056347 27.632 304 195 11 7 295 63 356 5.36e-23 98.2
MS.gene52264.t1 MTR_2g069020 28.923 325 186 12 2 302 58 361 5.73e-23 98.2
MS.gene52264.t1 MTR_8g009160 26.885 305 201 10 3 295 53 347 5.84e-23 98.2
MS.gene52264.t1 MTR_2g069020 28.793 323 189 11 2 302 58 361 5.99e-23 98.6
MS.gene52264.t1 MTR_5g032880 26.712 292 190 9 11 287 376 658 7.19e-23 99.8
MS.gene52264.t1 MTR_5g032880 25.086 291 202 8 11 294 38 319 4.77e-22 97.1
MS.gene52264.t1 MTR_1g070135 25.589 297 197 7 8 292 35 319 7.92e-23 97.4
MS.gene52264.t1 MTR_5g059140 29.434 265 160 8 11 260 42 294 8.17e-23 97.4
MS.gene52264.t1 MTR_5g032870 26.490 302 192 8 2 285 29 318 8.45e-23 97.4
MS.gene52264.t1 MTR_3g083370 26.573 286 177 11 23 295 19 284 8.97e-23 96.7
MS.gene52264.t1 MTR_3g026150 28.904 301 176 14 11 292 60 341 1.20e-22 97.1
MS.gene52264.t1 MTR_1g093110 29.260 311 183 11 3 293 62 355 1.33e-22 97.1
MS.gene52264.t1 MTR_3g058610 24.691 324 223 8 10 320 38 353 1.36e-22 97.1
MS.gene52264.t1 MTR_4g096840 26.351 296 193 10 11 292 29 313 1.44e-22 96.7
MS.gene52264.t1 MTR_5g025060 25.667 300 165 7 11 298 6 259 1.83e-22 95.1
MS.gene52264.t1 MTR_8g461330 29.900 301 186 11 9 294 25 315 2.93e-22 95.9
MS.gene52264.t1 MTR_2g072910 29.562 274 169 10 1 261 41 303 3.40e-22 95.9
MS.gene52264.t1 MTR_4g100590 25.667 300 199 10 11 296 9 298 4.03e-22 95.1
MS.gene52264.t1 MTR_1g093120 30.519 308 166 13 3 285 59 343 4.37e-22 95.9
MS.gene52264.t1 MTR_5g022020 28.033 239 159 5 28 260 61 292 5.09e-22 95.5
MS.gene52264.t1 MTR_5g048570 25.581 301 202 11 5 294 39 328 6.14e-22 95.1
MS.gene52264.t1 MTR_4g117880 27.707 314 185 12 11 301 60 354 1.02e-21 94.7
MS.gene52264.t1 MTR_1g093140 29.568 301 178 14 4 285 66 351 1.34e-21 94.4
MS.gene52264.t1 MTR_3g088565 25.597 293 200 9 11 293 3 287 1.35e-21 93.6
MS.gene52264.t1 MTR_7g016090 27.985 268 173 8 11 269 41 297 1.41e-21 94.0
MS.gene52264.t1 MTR_7g016090 27.985 268 173 8 11 269 39 295 1.47e-21 93.6
MS.gene52264.t1 MTR_2g069210 28.727 275 175 9 30 295 88 350 1.71e-21 94.0
MS.gene52264.t1 MTR_1g033810 28.623 276 175 9 1 264 37 302 2.32e-21 93.6
MS.gene52264.t1 MTR_8g009170 26.510 298 197 9 11 295 60 348 2.63e-21 93.6
MS.gene52264.t1 MTR_8g041620 29.455 275 159 10 5 261 62 319 2.90e-21 93.6
MS.gene52264.t1 MTR_1g032140 27.632 304 184 9 7 293 62 346 3.74e-21 93.2
MS.gene52264.t1 MTR_4g011720 29.832 238 149 6 26 251 31 262 4.85e-21 90.9
MS.gene52264.t1 MTR_5g055800 27.778 324 169 11 2 293 38 328 4.86e-21 92.4
MS.gene52264.t1 MTR_4g024660 29.286 280 155 9 3 261 59 316 9.57e-21 92.0
MS.gene52264.t1 MTR_3g063180 26.333 300 200 9 9 293 40 333 3.37e-20 90.1
MS.gene52264.t1 MTR_4g116010 30.822 292 181 9 4 285 43 323 3.78e-20 90.1
MS.gene52264.t1 MTR_1g070185 29.276 304 170 11 11 293 69 348 4.06e-20 90.1
MS.gene52264.t1 MTR_8g063070 27.652 264 180 6 3 261 59 316 4.37e-20 90.1
MS.gene52264.t1 MTR_1g062110 24.921 317 206 9 6 303 61 364 4.57e-20 90.1
MS.gene52264.t1 MTR_1g043810 26.846 298 190 9 3 285 46 330 5.94e-20 89.4
MS.gene52264.t1 MTR_7g029655 27.626 257 171 8 11 261 67 314 6.15e-20 89.7
MS.gene52264.t1 MTR_8g062600 28.195 266 168 9 7 261 63 316 7.98e-20 89.4
MS.gene52264.t1 MTR_8g102600 25.556 270 165 8 57 299 8 268 1.18e-19 87.4
MS.gene52264.t1 MTR_2g068800 27.309 249 149 5 10 249 54 279 1.32e-19 87.4
MS.gene52264.t1 MTR_8g041600 28.058 278 159 12 5 261 62 319 1.67e-19 88.6
MS.gene52264.t1 MTR_7g102820 25.574 305 189 9 5 284 61 352 2.59e-19 87.8
MS.gene52264.t1 MTR_3g117485 27.119 295 193 10 5 285 43 329 2.69e-19 87.4
MS.gene52264.t1 MTR_8g074070 27.302 315 198 13 5 301 46 347 2.79e-19 87.4
MS.gene52264.t1 MTR_8g469400 29.299 314 168 14 3 293 59 341 4.11e-19 87.0
MS.gene52264.t1 MTR_1g043770 28.173 323 184 12 3 299 45 345 4.58e-19 87.0
MS.gene52264.t1 MTR_2g069300 27.273 308 181 13 11 295 54 341 5.95e-19 86.7
MS.gene52264.t1 MTR_7g081710 24.359 312 203 9 11 304 49 345 7.67e-19 86.3
MS.gene52264.t1 MTR_5g011250 23.030 330 206 8 4 303 40 351 8.04e-19 86.3
MS.gene52264.t1 MTR_6g035160 35.036 137 85 3 160 295 29 162 1.48e-18 82.0
MS.gene52264.t1 MTR_0009s0480 29.339 242 153 9 1 233 36 268 1.52e-18 84.3
MS.gene52264.t1 MTR_3g040440 52.239 67 31 1 183 249 16 81 1.59e-18 84.0
MS.gene52264.t1 MTR_1g043775 27.961 304 179 11 3 285 46 330 2.40e-18 85.1
MS.gene52264.t1 MTR_5g055690 28.395 243 155 10 1 233 37 270 2.99e-18 83.6
MS.gene52264.t1 MTR_1g032250 34.507 142 85 5 156 293 216 353 3.10e-18 84.7
MS.gene52264.t1 MTR_0009s0050 32.967 182 113 5 119 294 54 232 4.72e-18 82.8
MS.gene52264.t1 MTR_8g074050 27.500 320 192 12 5 303 46 346 4.95e-18 84.0
MS.gene52264.t1 MTR_0009s0050 32.967 182 113 5 119 294 54 232 5.16e-18 82.4
MS.gene52264.t1 MTR_3g072810 26.978 278 182 6 30 295 58 326 5.59e-18 83.6
MS.gene52264.t1 MTR_1g043760 26.962 293 179 11 11 285 54 329 9.33e-18 83.2
MS.gene52264.t1 MTR_7g105070 27.273 286 155 12 1 260 49 307 9.49e-18 83.2
MS.gene52264.t1 MTR_0009s0050 34.641 153 96 3 143 294 1 150 1.02e-17 79.7
MS.gene52264.t1 MTR_8g009120 27.451 306 187 10 3 295 53 336 1.19e-17 82.8
MS.gene52264.t1 MTR_8g009180 38.462 130 75 4 177 302 157 285 2.09e-17 81.3
MS.gene52264.t1 MTR_4g132770 33.835 133 82 4 166 295 28 157 3.39e-17 78.2
MS.gene52264.t1 MTR_5g048850 27.459 244 153 12 2 233 38 269 4.29e-17 80.5
MS.gene52264.t1 MTR_1g070110 40.678 118 64 2 182 294 100 216 4.53e-17 79.3
MS.gene52264.t1 MTR_7g016080 24.549 277 176 10 7 272 37 291 1.03e-16 80.1
MS.gene52264.t1 MTR_0056s0160 36.184 152 89 5 111 260 36 181 1.09e-16 78.6
MS.gene52264.t1 MTR_7g062560 24.742 291 199 9 9 294 60 335 1.38e-16 79.7
MS.gene52264.t1 MTR_1g048940 24.183 306 209 9 8 300 42 337 1.43e-16 79.7
MS.gene52264.t1 MTR_3g117485 27.059 255 172 8 38 285 10 257 1.78e-16 78.6
MS.gene52264.t1 MTR_2g025120 26.695 236 142 11 12 233 5 223 1.97e-16 77.4
MS.gene52264.t1 MTR_1g032220 37.168 113 68 3 183 293 242 353 2.21e-16 79.3
MS.gene52264.t1 MTR_0009s0400 37.815 119 72 2 177 294 9 126 2.92e-16 75.1
MS.gene52264.t1 MTR_3g026150 28.497 193 114 8 111 293 61 239 5.51e-16 76.6
MS.gene52264.t1 MTR_2g437380 25.681 257 172 9 53 300 4 250 7.60e-16 76.6
MS.gene52264.t1 MTR_3g464530 31.092 238 130 11 11 233 34 252 1.12e-15 75.9
MS.gene52264.t1 MTR_2g072910 28.514 249 154 10 1 236 41 278 1.26e-15 76.3
MS.gene52264.t1 MTR_8g006930 29.085 306 192 10 3 293 59 354 1.56e-14 73.9
MS.gene52264.t1 MTR_1g027290 29.319 191 124 5 117 302 144 328 1.70e-14 73.6
MS.gene52264.t1 MTR_1g043840 35.000 140 86 3 122 261 51 185 2.16e-14 73.2
MS.gene52264.t1 MTR_1g070135 24.370 238 156 7 8 233 35 260 4.84e-14 71.6
MS.gene52264.t1 MTR_1g070100 28.814 177 121 3 111 287 61 232 7.82e-14 70.9
MS.gene52264.t1 MTR_1g070085 28.814 177 121 3 111 287 65 236 1.06e-13 70.5
MS.gene52264.t1 MTR_3g026150 29.167 240 136 11 11 233 60 282 1.12e-13 70.5
MS.gene52264.t1 MTR_1g043810 26.337 243 154 7 3 233 46 275 1.67e-13 70.5
MS.gene52264.t1 MTR_7g056393 27.778 306 200 10 3 295 59 356 1.71e-13 70.9
MS.gene52264.t1 MTR_3g083370 24.215 223 139 9 23 233 19 223 1.79e-13 69.3
MS.gene52264.t1 MTR_8g009170 26.180 233 153 7 11 233 60 283 2.12e-13 70.1
MS.gene52264.t1 MTR_7g078010 28.431 306 190 9 5 293 61 354 2.85e-13 70.1
MS.gene52264.t1 MTR_7g056353 40.367 109 58 3 183 285 213 320 4.95e-13 70.1
MS.gene52264.t1 MTR_4g100600 24.889 225 151 8 11 221 9 229 1.38e-12 66.6
MS.gene52264.t1 MTR_4g115990 27.972 286 178 9 5 285 40 302 1.67e-12 67.4
MS.gene52264.t1 MTR_1g043770 28.685 251 137 9 3 233 45 273 1.82e-12 67.4
MS.gene52264.t1 MTR_4g100590 24.710 259 171 10 52 296 3 251 2.82e-12 66.2
MS.gene52264.t1 MTR_8g009150 30.534 131 74 3 182 295 198 328 4.68e-12 66.2
MS.gene52264.t1 MTR_8g074070 31.746 126 82 3 179 301 204 328 4.92e-12 66.2
MS.gene52264.t1 MTR_4g119410 27.124 306 198 8 3 293 59 354 6.24e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52264.t1 AT4G23340 57.407 324 130 4 2 321 1 320 1.49e-130 375
MS.gene52264.t1 AT5G51310 53.727 322 131 6 10 317 4 321 3.81e-119 346
MS.gene52264.t1 AT4G23340 64.356 202 69 2 123 321 1 202 1.16e-92 274
MS.gene52264.t1 AT1G80330 34.915 295 177 7 11 296 49 337 6.40e-46 159
MS.gene52264.t1 AT4G25420 33.333 309 183 8 10 302 60 361 4.63e-41 147
MS.gene52264.t1 AT1G55290 33.437 323 184 9 7 317 58 361 8.10e-40 143
MS.gene52264.t1 AT3G19010 28.834 326 204 9 10 314 27 345 6.44e-37 135
MS.gene52264.t1 AT3G19010 28.834 326 204 9 10 314 27 345 6.44e-37 135
MS.gene52264.t1 AT5G07200 30.225 311 194 9 10 302 57 362 2.86e-36 134
MS.gene52264.t1 AT1G52820 30.075 266 181 3 30 295 38 298 5.03e-36 132
MS.gene52264.t1 AT4G21200 32.472 271 161 9 8 269 39 296 8.86e-36 132
MS.gene52264.t1 AT5G51810 31.013 316 194 10 4 302 51 359 1.78e-35 132
MS.gene52264.t1 AT3G13610 32.653 294 178 7 11 295 62 344 6.01e-35 130
MS.gene52264.t1 AT1G44090 30.380 316 198 9 2 301 54 363 6.09e-34 128
MS.gene52264.t1 AT1G15550 28.571 301 206 4 3 299 49 344 1.59e-33 127
MS.gene52264.t1 AT1G60980 30.449 312 189 9 10 302 56 358 1.26e-32 124
MS.gene52264.t1 AT1G50960 29.936 314 193 9 7 310 36 332 1.14e-31 121
MS.gene52264.t1 AT1G80340 28.713 303 207 4 1 299 40 337 5.29e-31 119
MS.gene52264.t1 AT1G52800 26.183 317 216 7 9 317 8 314 5.77e-31 119
MS.gene52264.t1 AT1G30040 28.897 263 168 8 7 260 28 280 3.56e-30 117
MS.gene52264.t1 AT1G78550 28.525 305 194 10 1 292 43 336 3.63e-30 117
MS.gene52264.t1 AT3G19000 28.750 320 196 9 10 307 31 340 1.61e-29 115
MS.gene52264.t1 AT5G58660 29.893 281 154 10 11 260 34 302 5.68e-28 111
MS.gene52264.t1 AT4G21690 31.461 267 159 9 9 260 45 302 1.51e-27 110
MS.gene52264.t1 AT3G21420 29.333 300 188 10 8 292 52 342 2.57e-27 110
MS.gene52264.t1 AT1G78440 28.814 295 187 7 11 292 18 302 3.15e-27 109
MS.gene52264.t1 AT2G38240 28.425 292 197 7 3 287 40 326 3.37e-27 109
MS.gene52264.t1 AT5G24530 29.450 309 187 9 2 294 29 322 4.12e-27 109
MS.gene52264.t1 AT3G12900 31.985 272 169 7 28 293 76 337 4.25e-27 109
MS.gene52264.t1 AT2G34555 28.740 254 172 5 11 260 27 275 4.35e-27 108
MS.gene52264.t1 AT1G14120 30.389 283 178 8 11 287 8 277 4.43e-27 108
MS.gene52264.t1 AT1G14120 30.389 283 178 8 11 287 8 277 4.43e-27 108
MS.gene52264.t1 AT1G14120 30.389 283 178 8 11 287 8 277 4.43e-27 108
MS.gene52264.t1 AT1G80320 28.383 303 204 6 4 298 2 299 6.99e-27 108
MS.gene52264.t1 AT5G08640 28.374 289 194 8 11 292 43 325 1.26e-26 107
MS.gene52264.t1 AT5G08640 28.374 289 194 8 11 292 43 325 1.26e-26 107
MS.gene52264.t1 AT1G17020 29.811 265 162 10 10 260 52 306 1.41e-26 108
MS.gene52264.t1 AT4G25300 30.370 270 165 10 4 260 45 304 2.11e-26 107
MS.gene52264.t1 AT5G05600 28.115 313 206 10 4 303 55 361 2.68e-26 107
MS.gene52264.t1 AT5G63600 26.871 294 197 9 7 293 29 311 2.87e-26 106
MS.gene52264.t1 AT1G52790 29.536 237 159 5 60 295 62 291 4.29e-26 105
MS.gene52264.t1 AT5G63600 26.621 293 198 8 7 293 29 310 6.17e-26 105
MS.gene52264.t1 AT1G14130 28.826 281 185 7 11 287 9 278 7.11e-26 105
MS.gene52264.t1 AT3G19010 25.926 324 186 9 10 314 27 315 8.14e-26 105
MS.gene52264.t1 AT4G03070 28.155 309 202 8 10 306 13 313 8.99e-26 105
MS.gene52264.t1 AT1G05010 30.363 303 175 14 12 295 5 290 1.40e-25 104
MS.gene52264.t1 AT3G55970 30.189 265 165 8 11 261 52 310 2.93e-25 104
MS.gene52264.t1 AT1G17010 27.632 304 195 10 4 293 47 339 4.39e-25 103
MS.gene52264.t1 AT3G51240 26.718 262 174 6 10 260 37 291 6.55e-25 103
MS.gene52264.t1 AT1G30040 28.814 236 149 8 7 233 28 253 2.09e-24 100
MS.gene52264.t1 AT4G25420 33.051 236 135 8 10 229 60 288 2.13e-24 100
MS.gene52264.t1 AT3G11180 28.803 309 191 11 11 303 95 390 3.65e-24 102
MS.gene52264.t1 AT3G46500 25.407 307 201 10 9 296 15 312 4.70e-24 100
MS.gene52264.t1 AT2G30830 31.399 293 176 9 7 285 50 331 1.20e-23 100
MS.gene52264.t1 AT1G62380 27.759 299 181 14 12 295 8 286 1.22e-23 99.4
MS.gene52264.t1 AT5G63590 28.713 303 191 9 7 296 10 300 1.26e-23 99.0
MS.gene52264.t1 AT3G47190 29.126 309 163 13 4 287 25 302 1.76e-23 99.0
MS.gene52264.t1 AT1G47990 27.037 270 161 7 10 260 14 266 1.79e-23 99.0
MS.gene52264.t1 AT3G11180 28.667 300 186 10 11 295 95 381 2.28e-23 99.8
MS.gene52264.t1 AT3G50210 27.703 296 168 10 1 261 1 285 3.72e-23 98.2
MS.gene52264.t1 AT3G50210 27.703 296 168 10 1 261 1 285 3.72e-23 98.2
MS.gene52264.t1 AT3G50210 27.703 296 168 10 1 261 1 285 3.72e-23 98.2
MS.gene52264.t1 AT1G12010 26.846 298 185 14 12 295 8 286 4.18e-23 97.8
MS.gene52264.t1 AT1G06620 27.575 301 200 8 5 295 56 348 1.07e-22 97.4
MS.gene52264.t1 AT1G03410 29.818 275 166 10 31 292 82 342 1.44e-22 97.1
MS.gene52264.t1 AT5G58660 28.968 252 137 9 11 232 34 273 1.53e-22 95.5
MS.gene52264.t1 AT1G02400 28.571 315 179 10 5 294 18 311 1.83e-22 96.3
MS.gene52264.t1 AT1G03410 30.597 268 159 10 31 285 119 372 2.52e-22 96.7
MS.gene52264.t1 AT5G59540 29.043 303 197 8 3 294 53 348 2.62e-22 96.3
MS.gene52264.t1 AT3G61400 26.644 289 194 6 11 285 60 344 2.94e-22 96.3
MS.gene52264.t1 AT5G43440 29.530 298 180 10 11 292 62 345 3.81e-22 95.9
MS.gene52264.t1 AT3G19010 27.755 245 149 9 10 233 27 264 4.01e-22 94.7
MS.gene52264.t1 AT1G77330 26.316 304 193 12 11 298 3 291 9.32e-22 94.0
MS.gene52264.t1 AT4G10490 27.551 294 195 10 11 294 42 327 1.25e-21 94.4
MS.gene52264.t1 AT5G51810 30.400 250 150 10 4 236 51 293 1.36e-21 93.2
MS.gene52264.t1 AT5G20400 28.339 307 196 12 10 301 44 341 1.42e-21 94.0
MS.gene52264.t1 AT1G52820 28.713 202 139 3 30 231 38 234 2.73e-21 91.7
MS.gene52264.t1 AT1G03400 29.658 263 159 9 8 261 53 298 4.57e-21 92.8
MS.gene52264.t1 AT2G36690 26.117 291 184 9 10 284 60 335 4.68e-21 92.8
MS.gene52264.t1 AT2G36690 26.117 291 184 9 10 284 60 335 4.68e-21 92.8
MS.gene52264.t1 AT5G43450 28.205 312 164 12 11 292 61 342 5.20e-21 92.8
MS.gene52264.t1 AT1G78550 27.170 265 173 9 37 292 5 258 7.88e-21 90.9
MS.gene52264.t1 AT1G06650 28.676 272 180 7 30 295 89 352 8.25e-21 92.0
MS.gene52264.t1 AT4G10500 26.599 297 183 11 11 288 44 324 1.68e-20 90.9
MS.gene52264.t1 AT5G12270 28.716 296 195 8 9 295 54 342 2.77e-20 90.5
MS.gene52264.t1 AT3G19000 26.275 255 159 8 10 242 31 278 2.87e-20 89.4
MS.gene52264.t1 AT5G43935 26.846 298 172 8 10 293 18 283 3.13e-20 89.4
MS.gene52264.t1 AT4G25310 29.918 244 139 12 31 260 76 301 3.23e-20 90.1
MS.gene52264.t1 AT5G59530 27.815 302 195 11 5 292 52 344 3.71e-20 90.1
MS.gene52264.t1 AT3G49620 27.907 301 157 13 1 261 26 306 4.25e-20 90.1
MS.gene52264.t1 AT5G63595 28.016 257 150 8 7 256 21 249 4.43e-20 88.6
MS.gene52264.t1 AT3G46500 25.092 271 175 10 9 260 15 276 5.37e-20 89.0
MS.gene52264.t1 AT2G30840 28.819 288 186 9 13 292 66 342 5.59e-20 89.7
MS.gene52264.t1 AT5G54000 28.772 285 189 8 10 285 45 324 7.84e-20 89.0
MS.gene52264.t1 AT1G04380 27.425 299 186 9 11 294 45 327 8.37e-20 89.0
MS.gene52264.t1 AT3G49630 26.939 245 162 6 30 261 37 277 1.56e-19 87.8
MS.gene52264.t1 AT3G49630 26.939 245 162 6 30 261 41 281 1.60e-19 88.2
MS.gene52264.t1 AT5G20550 28.720 289 187 10 10 286 44 325 1.78e-19 88.2
MS.gene52264.t1 AT1G35190 25.589 297 187 9 14 296 15 291 3.22e-19 86.7
MS.gene52264.t1 AT1G06640 29.197 274 176 9 30 295 89 352 4.11e-19 87.4
MS.gene52264.t1 AT1G35190 24.918 305 202 10 14 296 15 314 2.03e-18 84.7
MS.gene52264.t1 AT1G04350 26.641 259 181 5 31 285 80 333 2.60e-18 84.7
MS.gene52264.t1 AT2G44800 25.658 304 207 8 7 300 48 342 3.38e-18 84.7
MS.gene52264.t1 AT4G03050 36.496 137 83 3 183 318 275 408 4.57e-18 84.7
MS.gene52264.t1 AT4G03050 36.496 137 83 3 183 318 275 408 4.57e-18 84.7
MS.gene52264.t1 AT1G06645 27.574 272 180 9 30 295 102 362 1.27e-17 83.2
MS.gene52264.t1 AT1G49390 28.070 285 191 8 10 285 44 323 1.90e-17 82.4
MS.gene52264.t1 AT3G60290 23.548 310 198 7 11 300 52 342 2.48e-17 82.0
MS.gene52264.t1 AT1G28030 26.797 306 204 9 3 295 5 303 2.86e-17 81.6
MS.gene52264.t1 AT3G51240 27.570 214 142 5 53 260 1 207 7.24e-17 79.7
MS.gene52264.t1 AT5G07480 25.623 281 190 7 31 300 69 341 1.54e-16 79.7
MS.gene52264.t1 AT2G19590 28.431 306 183 14 10 302 10 292 1.77e-16 79.0
MS.gene52264.t1 AT3G55970 27.848 237 151 8 11 233 52 282 2.25e-16 78.6
MS.gene52264.t1 AT5G54000 28.629 248 170 6 41 285 1 244 3.37e-16 77.8
MS.gene52264.t1 AT5G63580 26.991 226 158 4 11 233 19 240 8.03e-16 76.3
MS.gene52264.t1 AT4G22880 25.597 293 197 9 9 286 45 331 9.05e-16 77.4
MS.gene52264.t1 AT4G22880 25.597 293 197 9 9 286 45 331 9.05e-16 77.4
MS.gene52264.t1 AT4G22880 25.597 293 197 9 9 286 45 331 9.05e-16 77.4
MS.gene52264.t1 AT3G61400 25.322 233 160 4 11 233 60 288 1.05e-15 76.6
MS.gene52264.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.22e-15 75.9
MS.gene52264.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.22e-15 75.9
MS.gene52264.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.22e-15 75.9
MS.gene52264.t1 AT5G05600 26.446 242 160 9 4 233 55 290 1.27e-15 76.3
MS.gene52264.t1 AT2G25450 26.736 288 189 7 11 285 55 333 1.97e-15 76.6
MS.gene52264.t1 AT5G63580 26.786 224 157 4 11 231 19 238 3.00e-15 74.3
MS.gene52264.t1 AT4G25300 34.483 145 86 5 119 260 72 210 3.07e-15 74.7
MS.gene52264.t1 AT3G46500 25.114 219 142 7 99 301 31 243 5.13e-15 73.9
MS.gene52264.t1 AT3G46500 25.114 219 142 7 99 301 31 243 5.13e-15 73.9
MS.gene52264.t1 AT5G43440 29.583 240 142 9 11 237 62 287 8.05e-15 73.9
MS.gene52264.t1 AT1G15540 26.623 308 197 12 10 300 8 303 8.52e-15 74.3
MS.gene52264.t1 AT1G15540 26.623 308 197 12 10 300 8 303 8.52e-15 74.3
MS.gene52264.t1 AT3G46500 27.273 187 122 6 123 301 1 181 8.83e-15 72.0
MS.gene52264.t1 AT1G15540 26.623 308 197 12 10 300 11 306 9.17e-15 74.3
MS.gene52264.t1 AT1G15540 26.623 308 197 12 10 300 15 310 9.29e-15 74.3
MS.gene52264.t1 AT1G02400 27.059 255 143 8 5 236 18 252 9.66e-15 73.6
MS.gene52264.t1 AT1G06620 27.731 238 153 8 5 233 56 283 1.23e-14 73.6
MS.gene52264.t1 AT4G16765 30.000 150 93 4 122 260 55 203 1.45e-14 72.4
MS.gene52264.t1 AT3G50210 31.818 154 99 4 112 261 52 203 7.53e-14 70.5
MS.gene52264.t1 AT4G25310 26.582 237 128 10 31 260 76 273 8.08e-14 71.6
MS.gene52264.t1 AT1G49390 28.226 248 171 6 41 285 1 244 1.29e-13 70.1
MS.gene52264.t1 AT3G49630 33.562 146 85 4 124 261 67 208 1.55e-13 69.7
MS.gene52264.t1 AT4G16765 30.952 126 82 2 175 296 69 193 1.14e-12 66.2
MS.gene52264.t1 AT5G07480 28.261 184 121 5 123 300 54 232 2.92e-12 65.9
MS.gene52264.t1 AT4G16770 24.670 227 153 5 10 221 21 244 1.05e-11 64.7
MS.gene52264.t1 AT1G52810 22.034 295 186 7 10 295 11 270 1.26e-11 64.7
MS.gene52264.t1 AT2G19590 27.372 274 168 12 38 302 26 277 2.00e-11 64.3
MS.gene52264.t1 AT3G46500 25.281 178 111 7 99 260 31 202 3.76e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAACTTTGCTTGCTTTA+AGG 0.001962 7.4:+28462146 None:intergenic
TTTGAGAGCCTAAGAGTTAA+TGG 0.172674 7.4:-28461962 MS.gene52264:CDS
TGAGGATGAAAAGGTAATTT+TGG 0.185599 7.4:-28461083 MS.gene52264:CDS
TCCTTAAAGCAAGCAAAGTT+TGG 0.229737 7.4:-28462147 MS.gene52264:CDS
AAGCTTGTATTGATGAGTTT+AGG 0.258602 7.4:-28461457 MS.gene52264:CDS
AAGCTGACTGCAAAGTTCTT+TGG 0.262298 7.4:+28462093 None:intergenic
TGGAATTTCAGCATGAGATT+TGG 0.292777 7.4:+28462216 None:intergenic
TGAGATCAAATGAAGGAAAA+TGG 0.294877 7.4:-28461255 MS.gene52264:CDS
AGTTAGGTCCATTAACTCTT+AGG 0.300447 7.4:+28461954 None:intergenic
AGCTTGTATTGATGAGTTTA+GGG 0.305345 7.4:-28461456 MS.gene52264:CDS
GTATAAACCATTTGTGTGTT+TGG 0.310267 7.4:-28461023 MS.gene52264:CDS
ACAACTAGTGTTCCCTCATT+TGG 0.311556 7.4:+28461220 None:intergenic
CCTTAAAGCAAGCAAAGTTT+GGG 0.324831 7.4:-28462146 MS.gene52264:CDS
ACAAACAGGATTCCAAATTC+AGG 0.335483 7.4:-28461892 MS.gene52264:intron
TTACTCTTGTCAAGAAATAA+TGG 0.352439 7.4:-28461365 MS.gene52264:CDS
TTTCAGAAGGGAGGCTGAAT+AGG 0.357914 7.4:+28462053 None:intergenic
AGAAATCCTCTTTGACAAAC+AGG 0.361377 7.4:-28461906 MS.gene52264:CDS
GGAACACTAGTTGTGAATAT+TGG 0.366651 7.4:-28461211 MS.gene52264:CDS
TCTGAAACTAAACTTAGAAT+TGG 0.389583 7.4:-28462037 MS.gene52264:CDS
TTAGCAGAAACATAAAAGTT+AGG 0.409350 7.4:+28461938 None:intergenic
CCATCTCCAACAACTTCATC+AGG 0.426294 7.4:+28461058 None:intergenic
GATGATCAAGTTGAAGGGCT+TGG 0.429653 7.4:-28461340 MS.gene52264:CDS
GAGAGAATAATGAAAGAGGA+AGG 0.434843 7.4:-28460985 MS.gene52264:CDS
TTTGCTTGCTTTAAGGAAAG+TGG 0.440568 7.4:+28462153 None:intergenic
AGTGTGATACTACAAGAATA+TGG 0.447749 7.4:-28461514 MS.gene52264:CDS
AAATAATCCAAACACACAAA+TGG 0.448457 7.4:+28461016 None:intergenic
TGGAATCCTGTTTGTCAAAG+AGG 0.468715 7.4:+28461900 None:intergenic
ATGGAAGATGATCAAGTTGA+AGG 0.472644 7.4:-28461346 MS.gene52264:CDS
ACTCTTAGGCTCTCAAAGAA+TGG 0.480140 7.4:+28461968 None:intergenic
TTTAGAGAGAATAATGAAAG+AGG 0.482001 7.4:-28460989 MS.gene52264:CDS
ATTCTAAGTTTAGTTTCAGA+AGG 0.493903 7.4:+28462040 None:intergenic
TTGGCACCTGATGAAGTTGT+TGG 0.497640 7.4:-28461064 MS.gene52264:CDS
GATAGATATATGTCCAAATG+AGG 0.514147 7.4:-28461233 MS.gene52264:CDS
AAAGTTCTTTGGAGATTCCA+TGG 0.515956 7.4:+28462104 None:intergenic
AGATTCCATGGTTGATTATG+TGG 0.518398 7.4:+28462116 None:intergenic
ACAAGAATATGGAAATAAGA+TGG 0.519665 7.4:-28461503 MS.gene52264:CDS
TCTGAGTTTAAGAACTGTCA+TGG 0.528456 7.4:-28461406 MS.gene52264:CDS
CCTGATGAAGTTGTTGGAGA+TGG 0.540022 7.4:-28461058 MS.gene52264:CDS
AATGGAGAAGCAATGAAATG+AGG 0.543284 7.4:+28461986 None:intergenic
TGGAAGATGATCAAGTTGAA+GGG 0.565163 7.4:-28461345 MS.gene52264:CDS
TTGTATCAAGATGAAATTGG+AGG 0.566993 7.4:-28461286 MS.gene52264:CDS
TTGTTGGAGATGGAAATAAG+AGG 0.572140 7.4:-28461048 MS.gene52264:CDS
TAAGTTTAGTTTCAGAAGGG+AGG 0.577051 7.4:+28462044 None:intergenic
TTCTAAGTTTAGTTTCAGAA+GGG 0.577834 7.4:+28462041 None:intergenic
TGTATCAAGATGAAATTGGA+GGG 0.579315 7.4:-28461285 MS.gene52264:CDS
AGAACTGTCATGGATACTTG+AGG 0.600309 7.4:-28461396 MS.gene52264:CDS
CTTCAAGTGAGATCAAATGA+AGG 0.602769 7.4:-28461262 MS.gene52264:CDS
TTGGAGATATGCTTCAAGCA+TGG 0.606928 7.4:-28461192 MS.gene52264:CDS
AGAATATGGAAATAAGATGG+AGG 0.616643 7.4:-28461500 MS.gene52264:CDS
TTCTTCCACATAATCAACCA+TGG 0.622356 7.4:-28462121 MS.gene52264:CDS
GTATTGATGAGTTTAGGGGA+AGG 0.629826 7.4:-28461451 MS.gene52264:CDS
ATAGATATATGTCCAAATGA+GGG 0.637798 7.4:-28461232 MS.gene52264:CDS
CTTAAAGCAAGCAAAGTTTG+GGG 0.645655 7.4:-28462145 MS.gene52264:CDS
GCTTGTATTGATGAGTTTAG+GGG 0.646194 7.4:-28461455 MS.gene52264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAACACTTATAGAATA+AGG - chr7.4:28461362-28461381 MS.gene52264:CDS 15.0%
!! ATTAAACACTTATAGAATAA+GGG - chr7.4:28461363-28461382 MS.gene52264:CDS 15.0%
!!! TAAGATTTTAAAGATGAAAA+TGG + chr7.4:28461144-28461163 None:intergenic 15.0%
!! CTACTTATATGAAAATAGTT+TGG + chr7.4:28461404-28461423 None:intergenic 20.0%
!!! ATTTTGTATCAAGATGAAAT+TGG - chr7.4:28461865-28461884 MS.gene52264:intron 20.0%
! AAATAATCCAAACACACAAA+TGG + chr7.4:28462141-28462160 None:intergenic 25.0%
! AATATGTTGAAAACAGCTTA+TGG - chr7.4:28461459-28461478 MS.gene52264:CDS 25.0%
! ACAAGAATATGGAAATAAGA+TGG - chr7.4:28461651-28461670 MS.gene52264:intron 25.0%
! ATAGATATATGTCCAAATGA+GGG - chr7.4:28461922-28461941 MS.gene52264:CDS 25.0%
! CATTACATAAAAGTAGACAT+AGG + chr7.4:28461577-28461596 None:intergenic 25.0%
! TTACTCTTGTCAAGAAATAA+TGG - chr7.4:28461789-28461808 MS.gene52264:intron 25.0%
! TTAGCAGAAACATAAAAGTT+AGG + chr7.4:28461219-28461238 None:intergenic 25.0%
! TTTAGAGAGAATAATGAAAG+AGG - chr7.4:28462165-28462184 MS.gene52264:CDS 25.0%
!! ATTCTAAGTTTAGTTTCAGA+AGG + chr7.4:28461117-28461136 None:intergenic 25.0%
!! TATTGTGTTTTACCTGAATT+TGG + chr7.4:28461277-28461296 None:intergenic 25.0%
!! TCTGAAACTAAACTTAGAAT+TGG - chr7.4:28461117-28461136 MS.gene52264:CDS 25.0%
!! TTCTAAGTTTAGTTTCAGAA+GGG + chr7.4:28461116-28461135 None:intergenic 25.0%
!!! AGCTTCTACTTTTATCAATT+TGG - chr7.4:28461317-28461336 MS.gene52264:CDS 25.0%
!!! CTATGTCTACTTTTATGTAA+TGG - chr7.4:28461575-28461594 MS.gene52264:intron 25.0%
!!! GTTTTTGACATGTCTAAAAT+TGG + chr7.4:28460961-28460980 None:intergenic 25.0%
AGAATATGGAAATAAGATGG+AGG - chr7.4:28461654-28461673 MS.gene52264:intron 30.0%
AGTGTGATACTACAAGAATA+TGG - chr7.4:28461640-28461659 MS.gene52264:intron 30.0%
GATAGATATATGTCCAAATG+AGG - chr7.4:28461921-28461940 MS.gene52264:CDS 30.0%
GTATAAACCATTTGTGTGTT+TGG - chr7.4:28462131-28462150 MS.gene52264:CDS 30.0%
TGAGATCAAATGAAGGAAAA+TGG - chr7.4:28461899-28461918 MS.gene52264:CDS 30.0%
TGTATCAAGATGAAATTGGA+GGG - chr7.4:28461869-28461888 MS.gene52264:intron 30.0%
TTATCAATTTGGACACTGTT+TGG - chr7.4:28461328-28461347 MS.gene52264:CDS 30.0%
TTGTATCAAGATGAAATTGG+AGG - chr7.4:28461868-28461887 MS.gene52264:intron 30.0%
! AAGCTTGTATTGATGAGTTT+AGG - chr7.4:28461697-28461716 MS.gene52264:intron 30.0%
! AGATTTTGCTGGGATTAATA+AGG - chr7.4:28462218-28462237 MS.gene52264:CDS 30.0%
! AGCTTGTATTGATGAGTTTA+GGG - chr7.4:28461698-28461717 MS.gene52264:intron 30.0%
! AGTTTTCGAAAGCTATATCA+TGG - chr7.4:28461422-28461441 MS.gene52264:CDS 30.0%
! GATTTTCACTAGCATTCTTT+TGG - chr7.4:28462043-28462062 MS.gene52264:CDS 30.0%
! TCACTGTTAAAGATTTTGCT+GGG - chr7.4:28462208-28462227 MS.gene52264:CDS 30.0%
! TGAGGATGAAAAGGTAATTT+TGG - chr7.4:28462071-28462090 MS.gene52264:CDS 30.0%
! TTCACTGTTAAAGATTTTGC+TGG - chr7.4:28462207-28462226 MS.gene52264:CDS 30.0%
!! GACTTTTTGAGCTTATCTAT+TGG + chr7.4:28461540-28461559 None:intergenic 30.0%
AATGGAGAAGCAATGAAATG+AGG + chr7.4:28461171-28461190 None:intergenic 35.0%
ACAAACAGGATTCCAAATTC+AGG - chr7.4:28461262-28461281 MS.gene52264:CDS 35.0%
AGAAATCCTCTTTGACAAAC+AGG - chr7.4:28461248-28461267 MS.gene52264:CDS 35.0%
AGAGGAAGGTTTGAAAAAGT+TGG - chr7.4:28462183-28462202 MS.gene52264:CDS 35.0%
AGATTCCATGGTTGATTATG+TGG + chr7.4:28461041-28461060 None:intergenic 35.0%
AGTTAGGTCCATTAACTCTT+AGG + chr7.4:28461203-28461222 None:intergenic 35.0%
CCTTAAAGCAAGCAAAGTTT+GGG - chr7.4:28461008-28461027 MS.gene52264:CDS 35.0%
CTTAAAGCAAGCAAAGTTTG+GGG - chr7.4:28461009-28461028 MS.gene52264:CDS 35.0%
CTTCAAGTGAGATCAAATGA+AGG - chr7.4:28461892-28461911 MS.gene52264:intron 35.0%
GAGAGAATAATGAAAGAGGA+AGG - chr7.4:28462169-28462188 MS.gene52264:CDS 35.0%
GGAACACTAGTTGTGAATAT+TGG - chr7.4:28461943-28461962 MS.gene52264:CDS 35.0%
TCCTTAAAGCAAGCAAAGTT+TGG - chr7.4:28461007-28461026 MS.gene52264:CDS 35.0%
TCTGAGTTTAAGAACTGTCA+TGG - chr7.4:28461748-28461767 MS.gene52264:intron 35.0%
TGGAATTTCAGCATGAGATT+TGG + chr7.4:28460941-28460960 None:intergenic 35.0%
TTCTTCCACATAATCAACCA+TGG - chr7.4:28461033-28461052 MS.gene52264:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG - chr7.4:28462106-28462125 MS.gene52264:CDS 35.0%
TTTGAGAGCCTAAGAGTTAA+TGG - chr7.4:28461192-28461211 MS.gene52264:CDS 35.0%
! AAAGTTCTTTGGAGATTCCA+TGG + chr7.4:28461053-28461072 None:intergenic 35.0%
! GCTTGTATTGATGAGTTTAG+GGG - chr7.4:28461699-28461718 MS.gene52264:intron 35.0%
! TAAGTTTAGTTTCAGAAGGG+AGG + chr7.4:28461113-28461132 None:intergenic 35.0%
!! ATGGAAGATGATCAAGTTGA+AGG - chr7.4:28461808-28461827 MS.gene52264:intron 35.0%
!! TGGAAGATGATCAAGTTGAA+GGG - chr7.4:28461809-28461828 MS.gene52264:intron 35.0%
!! TTTGCTTGCTTTAAGGAAAG+TGG + chr7.4:28461004-28461023 None:intergenic 35.0%
!!! AGCATTCTTTTGGTGTTTTG+AGG - chr7.4:28462053-28462072 MS.gene52264:CDS 35.0%
!!! TTGGTGTTTTGAGGATGAAA+AGG - chr7.4:28462062-28462081 MS.gene52264:CDS 35.0%
AAGCTGACTGCAAAGTTCTT+TGG + chr7.4:28461064-28461083 None:intergenic 40.0%
ACAACTAGTGTTCCCTCATT+TGG + chr7.4:28461937-28461956 None:intergenic 40.0%
ACTCTTAGGCTCTCAAAGAA+TGG + chr7.4:28461189-28461208 None:intergenic 40.0%
AGAACTGTCATGGATACTTG+AGG - chr7.4:28461758-28461777 MS.gene52264:intron 40.0%
AGAGGAACTCGAAGATCTTA+TGG + chr7.4:28461503-28461522 None:intergenic 40.0%
CCCAAACTTTGCTTGCTTTA+AGG + chr7.4:28461011-28461030 None:intergenic 40.0%
TGGAATCCTGTTTGTCAAAG+AGG + chr7.4:28461257-28461276 None:intergenic 40.0%
TTGGAGATATGCTTCAAGCA+TGG - chr7.4:28461962-28461981 MS.gene52264:CDS 40.0%
TTGGCATAAGAAATTGCGAG+AGG + chr7.4:28461521-28461540 None:intergenic 40.0%
! GTATTGATGAGTTTAGGGGA+AGG - chr7.4:28461703-28461722 MS.gene52264:intron 40.0%
CCATCTCCAACAACTTCATC+AGG + chr7.4:28462099-28462118 None:intergenic 45.0%
CCTGATGAAGTTGTTGGAGA+TGG - chr7.4:28462096-28462115 MS.gene52264:CDS 45.0%
TTGGCACCTGATGAAGTTGT+TGG - chr7.4:28462090-28462109 MS.gene52264:CDS 45.0%
TTTCAGAAGGGAGGCTGAAT+AGG + chr7.4:28461104-28461123 None:intergenic 45.0%
!! GATGATCAAGTTGAAGGGCT+TGG - chr7.4:28461814-28461833 MS.gene52264:intron 45.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 28460925 28462251 28460925 ID=MS.gene52264
chr7.4 mRNA 28460925 28462251 28460925 ID=MS.gene52264.t1;Parent=MS.gene52264
chr7.4 exon 28461893 28462251 28461893 ID=MS.gene52264.t1.exon1;Parent=MS.gene52264.t1
chr7.4 CDS 28461893 28462251 28461893 ID=cds.MS.gene52264.t1;Parent=MS.gene52264.t1
chr7.4 exon 28460925 28461534 28460925 ID=MS.gene52264.t1.exon2;Parent=MS.gene52264.t1
chr7.4 CDS 28460925 28461534 28460925 ID=cds.MS.gene52264.t1;Parent=MS.gene52264.t1
Gene Sequence

>MS.gene52264

ATGATGTCTGATTCCAAATCTCATGCTGAAATTCCAATTTTAGACATGTCAAAAACATTAGATTCATCTTCATTATCCACTTTCCTTAAAGCAAGCAAAGTTTGGGGATTCTTCCACATAATCAACCATGGAATCTCCAAAGAACTTTGCAGTCAGCTTCATTCAATATCAAAATACCTATTCAGCCTCCCTTCTGAAACTAAACTTAGAATTGGTCCATTTTCATCTTTAAAATCTTATACTCCTCATTTCATTGCTTCTCCATTCTTTGAGAGCCTAAGAGTTAATGGACCTAACTTTTATGTTTCTGCTAAGAGCTCTTCAGAAATCCTCTTTGACAAACAGGATTCCAAATTCAGGTAAAACACAATAAGCACAGTGTTATCTTATTAAGCTTCTACTTTTATCAATTTGGACACTGTTTGGATAAACAACTTAATTAAACACTTATAGAATAAGGGTTTATCATATAAATGCCAAACTATTTTCATATAAGTAGTTTTCGAAAGCTATATCATGGAGAGTGCTTACGAAAATATGTTGAAAACAGCTTATGGACATGTCATAAGTTGTTTCCATAAGATCTTCGAGTTCCTCTCGCAATTTCTTATGCCAATAGATAAGCTCAAAAAGTCACTTGATGTCTTTTCCTATGTCTACTTTTATGTAATGGAATATAAGTTTATTTATTTATATTATTTTTTTGAATTTGATTAGTGTGATACTACAAGAATATGGAAATAAGATGGAGGAGTTGTCTAAGAAAATTGTAAAGCTTGTATTGATGAGTTTAGGGGAAGGTATTGAGAAAAAGTTTTATGATTCTGAGTTTAAGAACTGTCATGGATACTTGAGGATAAACAATTACTCTTGTCAAGAAATAATGGAAGATGATCAAGTTGAAGGGCTTGGAATGCACACTGACATGAGTTGTATTACTATTTTGTATCAAGATGAAATTGGAGGGCTTCAAGTGAGATCAAATGAAGGAAAATGGATAGATATATGTCCAAATGAGGGAACACTAGTTGTGAATATTGGAGATATGCTTCAAGCATGGAGTAATGATAAATTAAGATCTTCAGAACATAGAGTTGTTTTGAAGCATACTGTTGAGAGATTTTCACTAGCATTCTTTTGGTGTTTTGAGGATGAAAAGGTAATTTTGGCACCTGATGAAGTTGTTGGAGATGGAAATAAGAGGAAGTATAAACCATTTGTGTGTTTGGATTATTTGAAATTTAGAGAGAATAATGAAAGAGGAAGGTTTGAAAAAGTTGGTTTCACTGTTAAAGATTTTGCTGGGATTAATAAGGCTCACCTATAA
Protein sequence

>MS.gene52264.t1

MMSDSKSHAEIPILDMSKTLDSSSLSTFLKASKVWGFFHIINHGISKELCSQLHSISKYLFSLPSETKLRIGPFSSLKSYTPHFIASPFFESLRVNGPNFYVSAKSSSEILFDKQDSKFSVILQEYGNKMEELSKKIVKLVLMSLGEGIEKKFYDSEFKNCHGYLRINNYSCQEIMEDDQVEGLGMHTDMSCITILYQDEIGGLQVRSNEGKWIDICPNEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHTVERFSLAFFWCFEDEKVILAPDEVVGDGNKRKYKPFVCLDYLKFRENNERGRFEKVGFTVKDFAGINKAHL