Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52323.t1 | AES80745.2 | 81.2 | 144 | 27 | 0 | 90 | 233 | 190 | 333 | 6.90E-57 | 230.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52323.t1 | Q9AVK0 | 40.5 | 121 | 66 | 1 | 113 | 233 | 253 | 367 | 1.3e-19 | 98.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52323.t1 | G7KXC1 | 81.2 | 144 | 27 | 0 | 90 | 233 | 190 | 333 | 4.9e-57 | 230.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049611 | MS.gene52323 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene52323 | 0.815198 | 1.05E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene52323 | 0.801359 | 9.34E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene52323 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene52323 | 0.820267 | 7.51E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene52323 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene52323 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene52323 | 0.842732 | 2.16E-58 | -1.69E-46 |
| MS.gene060405 | MS.gene52323 | 0.821367 | 4.19E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52323.t1 | MTR_7g084330 | 81.250 | 144 | 27 | 0 | 90 | 233 | 190 | 333 | 6.20e-78 | 238 |
| MS.gene52323.t1 | MTR_7g084620 | 85.950 | 121 | 17 | 0 | 113 | 233 | 245 | 365 | 4.06e-72 | 224 |
| MS.gene52323.t1 | MTR_7g084350 | 68.182 | 154 | 46 | 1 | 80 | 233 | 215 | 365 | 2.62e-68 | 214 |
| MS.gene52323.t1 | MTR_3g467560 | 68.750 | 144 | 40 | 2 | 90 | 231 | 247 | 387 | 2.27e-61 | 197 |
| MS.gene52323.t1 | MTR_7g084340 | 70.732 | 123 | 36 | 0 | 109 | 231 | 7 | 129 | 3.15e-57 | 178 |
| MS.gene52323.t1 | MTR_6g015620 | 48.760 | 121 | 57 | 2 | 114 | 231 | 18 | 136 | 3.36e-32 | 114 |
| MS.gene52323.t1 | MTR_3g117060 | 44.286 | 140 | 63 | 3 | 105 | 231 | 230 | 367 | 2.89e-30 | 115 |
| MS.gene52323.t1 | MTR_1g022465 | 41.322 | 121 | 63 | 2 | 113 | 231 | 262 | 376 | 1.34e-20 | 89.4 |
| MS.gene52323.t1 | MTR_1g022455 | 39.496 | 119 | 69 | 1 | 113 | 231 | 262 | 377 | 2.35e-18 | 83.2 |
| MS.gene52323.t1 | MTR_8g077040 | 34.328 | 134 | 80 | 3 | 106 | 233 | 239 | 370 | 1.23e-17 | 80.9 |
| MS.gene52323.t1 | MTR_3g467270 | 31.343 | 134 | 84 | 2 | 106 | 233 | 238 | 369 | 2.74e-17 | 80.1 |
| MS.gene52323.t1 | MTR_5g020940 | 28.095 | 210 | 126 | 6 | 47 | 231 | 170 | 379 | 5.76e-17 | 79.3 |
| MS.gene52323.t1 | MTR_4g018820 | 32.847 | 137 | 73 | 3 | 107 | 231 | 228 | 357 | 1.20e-16 | 78.2 |
| MS.gene52323.t1 | MTR_8g076900 | 31.092 | 119 | 78 | 1 | 113 | 231 | 246 | 360 | 5.95e-14 | 70.5 |
| MS.gene52323.t1 | MTR_8g020690 | 31.746 | 126 | 79 | 3 | 106 | 231 | 240 | 358 | 8.62e-13 | 67.0 |
| MS.gene52323.t1 | MTR_8g020700 | 29.134 | 127 | 80 | 2 | 105 | 231 | 239 | 355 | 1.10e-12 | 66.6 |
| MS.gene52323.t1 | MTR_6g056070 | 30.579 | 121 | 74 | 2 | 113 | 233 | 247 | 357 | 4.22e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52323.t1 | AT1G19640 | 37.097 | 124 | 73 | 2 | 113 | 231 | 264 | 387 | 5.85e-21 | 90.5 |
| MS.gene52323.t1 | AT3G11480 | 36.508 | 126 | 73 | 1 | 106 | 231 | 260 | 378 | 4.16e-16 | 76.6 |
| MS.gene52323.t1 | AT5G66430 | 39.091 | 110 | 63 | 2 | 106 | 213 | 228 | 335 | 2.47e-15 | 74.3 |
| MS.gene52323.t1 | AT5G04370 | 37.705 | 122 | 65 | 4 | 113 | 231 | 295 | 408 | 2.42e-14 | 72.0 |
| MS.gene52323.t1 | AT5G04370 | 37.705 | 122 | 65 | 4 | 113 | 231 | 276 | 389 | 2.43e-14 | 71.6 |
| MS.gene52323.t1 | AT5G04370 | 37.705 | 122 | 65 | 4 | 113 | 231 | 281 | 394 | 3.19e-14 | 71.6 |
| MS.gene52323.t1 | AT5G38020 | 37.273 | 110 | 58 | 4 | 113 | 213 | 241 | 348 | 2.12e-12 | 65.9 |
| MS.gene52323.t1 | AT5G38020 | 37.273 | 110 | 58 | 4 | 113 | 213 | 202 | 309 | 2.47e-12 | 65.5 |
| MS.gene52323.t1 | AT4G36470 | 30.252 | 119 | 76 | 1 | 113 | 231 | 258 | 369 | 2.87e-11 | 62.8 |
Find 60 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGTTTGCAAATC+TGG | 0.189499 | 7.3:-24237106 | MS.gene52323:CDS |
| TTTGGTTGAAGAAGCAAAAT+TGG | 0.233886 | 7.3:-24237376 | MS.gene52323:CDS |
| TTACCATATTTAAGGATTCT+TGG | 0.269472 | 7.3:+24237026 | None:intergenic |
| ACATCTTGAGTGGTTGGATT+TGG | 0.286217 | 7.3:-24240255 | MS.gene52323:CDS |
| AATCAACAATATCTTCTTGT+AGG | 0.299467 | 7.3:+24237235 | None:intergenic |
| GGATTAGGTGGTTTCGGTGG+TGG | 0.319096 | 7.3:+24240467 | None:intergenic |
| ATTAGGTGGTTTCGGTGGTG+GGG | 0.331398 | 7.3:+24240469 | None:intergenic |
| AGGTGAGATGGTCACGGATT+AGG | 0.354118 | 7.3:+24240452 | None:intergenic |
| TTAGGTGGTTTCGGTGGTGG+GGG | 0.359329 | 7.3:+24240470 | None:intergenic |
| GTGCTTTGGTGGTCGCGTTT+CGG | 0.375468 | 7.3:+24240622 | None:intergenic |
| TGTTTCACTTCCTCTATAGT+AGG | 0.377591 | 7.3:+24237327 | None:intergenic |
| GCCGCTGTTGGATTGTGCTT+TGG | 0.383948 | 7.3:+24240608 | None:intergenic |
| GCGCTCTGCTGTTGGGTGTT+CGG | 0.385102 | 7.3:+24240680 | None:intergenic |
| GATTAGGTGGTTTCGGTGGT+GGG | 0.394550 | 7.3:+24240468 | None:intergenic |
| GGTCCGGTGGTGTGAGGTGG+TGG | 0.407472 | 7.3:+24240498 | None:intergenic |
| GGTGGTCCGGTGGTGTGAGG+TGG | 0.414727 | 7.3:+24240495 | None:intergenic |
| AGCAGTCTGCGCTCTGCTGT+TGG | 0.415264 | 7.3:+24240672 | None:intergenic |
| GGTGGTGGTCCGGTGGTGTG+AGG | 0.415756 | 7.3:+24240492 | None:intergenic |
| GGTCACGGATTAGGTGGTTT+CGG | 0.421531 | 7.3:+24240461 | None:intergenic |
| TAGGTGGTTTCGGTGGTGGG+GGG | 0.436608 | 7.3:+24240471 | None:intergenic |
| GCAGTCTGCGCTCTGCTGTT+GGG | 0.455993 | 7.3:+24240673 | None:intergenic |
| ATAAACAGCCCTGTGATACT+TGG | 0.473009 | 7.3:+24237176 | None:intergenic |
| GAATCTACATCTTGAGTGGT+TGG | 0.473133 | 7.3:-24240261 | MS.gene52323:CDS |
| TCTATAGTAGGATGATATAC+AGG | 0.482913 | 7.3:+24237339 | None:intergenic |
| AAAAGTCTTCAATGTTTGAA+GGG | 0.485869 | 7.3:+24237278 | None:intergenic |
| TGTATATCATCCTACTATAG+AGG | 0.486196 | 7.3:-24237337 | MS.gene52323:CDS |
| AATTCATAGCCAAGTATCAC+AGG | 0.487711 | 7.3:-24237185 | MS.gene52323:CDS |
| TAAAAGTCTTCAATGTTTGA+AGG | 0.490410 | 7.3:+24237277 | None:intergenic |
| TCATGGATGAATTGTTCTCA+AGG | 0.497534 | 7.3:-24237119 | MS.gene52323:CDS |
| TGTCACCAAGCTGCCGCTGT+TGG | 0.501419 | 7.3:+24240596 | None:intergenic |
| GCGGCAGCTTGGTGACAGTC+AGG | 0.507389 | 7.3:-24240590 | MS.gene52323:CDS |
| ACAATCCAACAGCGGCAGCT+TGG | 0.532660 | 7.3:-24240601 | MS.gene52323:CDS |
| CCAAACCCGGCTATGAAAAG+AGG | 0.536351 | 7.3:+24237150 | None:intergenic |
| GTCGCGTTTCGGCCTTGCGG+TGG | 0.543170 | 7.3:+24240633 | None:intergenic |
| GCTGTTGGATTGTGCTTTGG+TGG | 0.543284 | 7.3:+24240611 | None:intergenic |
| TTGTCGATAGCAAAATGAGA+GGG | 0.543353 | 7.3:-24237209 | MS.gene52323:CDS |
| AAGAAGGTGGTGCGGAGACA+AGG | 0.551729 | 7.3:-24240306 | MS.gene52323:CDS |
| AGATCTGTGCAGATCTGTGT+TGG | 0.558348 | 7.3:+24240522 | None:intergenic |
| GGAAGTGAAACAAGTGATTG+AGG | 0.563062 | 7.3:-24237316 | MS.gene52323:CDS |
| CACAACCACCGCCAGGAAGG+AGG | 0.565416 | 7.3:-24240549 | MS.gene52323:CDS |
| ACTCATTGAGATAGAGACAT+TGG | 0.576407 | 7.3:-24237076 | MS.gene52323:CDS |
| GTGAACGGAGATGCTGAAGA+AGG | 0.578111 | 7.3:-24240322 | MS.gene52323:CDS |
| ACAGAAGCACAACCACCGCC+AGG | 0.578249 | 7.3:-24240556 | MS.gene52323:CDS |
| CTACCACCACCTCACACCAC+CGG | 0.582229 | 7.3:-24240501 | MS.gene52323:CDS |
| AAGCACAACCACCGCCAGGA+AGG | 0.582413 | 7.3:-24240552 | MS.gene52323:CDS |
| CACGGATTAGGTGGTTTCGG+TGG | 0.589069 | 7.3:+24240464 | None:intergenic |
| TGAGATGGTCACGGATTAGG+TGG | 0.592507 | 7.3:+24240455 | None:intergenic |
| ACCAAAGCACAATCCAACAG+CGG | 0.616275 | 7.3:-24240609 | MS.gene52323:CDS |
| AAACAAGTGATTGAGGCAGA+AGG | 0.616874 | 7.3:-24237309 | MS.gene52323:CDS |
| GATGTAGATTCTAGCAGCGG+TGG | 0.629412 | 7.3:+24240273 | None:intergenic |
| CGGGTTTGGAGAAAACATCA+TGG | 0.634728 | 7.3:-24237136 | MS.gene52323:CDS |
| AGATGCTGAAGAAGGTGGTG+CGG | 0.639762 | 7.3:-24240314 | MS.gene52323:CDS |
| GCTAGAATCTACATCTTGAG+TGG | 0.646583 | 7.3:-24240265 | MS.gene52323:CDS |
| GTTGTCGATAGCAAAATGAG+AGG | 0.657254 | 7.3:-24237210 | MS.gene52323:CDS |
| CAAGATGTAGATTCTAGCAG+CGG | 0.661598 | 7.3:+24240270 | None:intergenic |
| ACGCTGCTACAACCACCGCA+AGG | 0.674947 | 7.3:-24240645 | MS.gene52323:CDS |
| TGTCGATAGCAAAATGAGAG+GGG | 0.698320 | 7.3:-24237208 | MS.gene52323:CDS |
| ATTCATAGCCAAGTATCACA+GGG | 0.701859 | 7.3:-24237184 | MS.gene52323:CDS |
| GTGGTCGCGTTTCGGCCTTG+CGG | 0.703911 | 7.3:+24240630 | None:intergenic |
| AACGGAGATGCTGAAGAAGG+TGG | 0.705574 | 7.3:-24240319 | MS.gene52323:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAAAGTAATAAAATT+TGG | - | chr7.3:24239144-24239163 | MS.gene52323:intron | 10.0% |
| !! | ATAAAAAATATCAACATTAT+TGG | - | chr7.3:24239967-24239986 | MS.gene52323:intron | 10.0% |
| !! | TAAAAAATATCAACATTATT+GGG | - | chr7.3:24239968-24239987 | MS.gene52323:intron | 10.0% |
| !! | TATTATAGTCATTATAAAAA+GGG | + | chr7.3:24239380-24239399 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr7.3:24238442-24238461 | None:intergenic | 10.0% |
| !! | TTATTATAGTCATTATAAAA+AGG | + | chr7.3:24239381-24239400 | None:intergenic | 10.0% |
| !!! | ATAACTATCATTTTTTTATA+AGG | - | chr7.3:24238847-24238866 | MS.gene52323:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr7.3:24238381-24238400 | None:intergenic | 10.0% |
| !!! | TAACTATCATTTTTTTATAA+GGG | - | chr7.3:24238848-24238867 | MS.gene52323:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr7.3:24238380-24238399 | None:intergenic | 10.0% |
| !!! | TTACTTTCTTTTTTTTTTTT+TGG | - | chr7.3:24239888-24239907 | MS.gene52323:intron | 10.0% |
| !!! | TTTTTATCTTTATTTTCATA+GGG | + | chr7.3:24239954-24239973 | None:intergenic | 10.0% |
| !!! | TTTTTTATCTTTATTTTCAT+AGG | + | chr7.3:24239955-24239974 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTCCTTTTTAA+GGG | + | chr7.3:24238251-24238270 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCCTTTTTA+AGG | + | chr7.3:24238252-24238271 | None:intergenic | 10.0% |
| !! | AAAAATAATAAATGTTGCAT+TGG | - | chr7.3:24237858-24237877 | MS.gene52323:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr7.3:24238782-24238763 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr7.3:24238692-24238711 | MS.gene52323:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr7.3:24238764-24238783 | MS.gene52323:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr7.3:24238783-24238764 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr7.3:24238783-24238764 | None:intergenic | 15.0% |
| !! | ACTAAAAATGTCTTATATTT+AGG | - | chr7.3:24238042-24238061 | MS.gene52323:intron | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr7.3:24238573-24238592 | MS.gene52323:intron | 15.0% |
| !! | ATTATAGTAAACTTTATATC+GGG | + | chr7.3:24238200-24238219 | None:intergenic | 15.0% |
| !! | CATTATAGTAAACTTTATAT+CGG | + | chr7.3:24238201-24238220 | None:intergenic | 15.0% |
| !! | CTAAAAATGTCTTATATTTA+GGG | - | chr7.3:24238043-24238062 | MS.gene52323:intron | 15.0% |
| !! | TAAAATAAATATGGATATGT+TGG | - | chr7.3:24237955-24237974 | MS.gene52323:intron | 15.0% |
| !! | TAGATAAAAAAAATAAACCT+TGG | - | chr7.3:24240273-24240292 | MS.gene52323:CDS | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr7.3:24239262-24239243 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr7.3:24238413-24238432 | None:intergenic | 15.0% |
| !!! | AAATTTTGCGATAATTTTTT+GGG | - | chr7.3:24239178-24239197 | MS.gene52323:intron | 15.0% |
| !!! | AATAAATAAGGGTATATTAA+TGG | - | chr7.3:24237833-24237852 | MS.gene52323:intron | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr7.3:24238608-24238627 | MS.gene52323:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr7.3:24237899-24237918 | MS.gene52323:intron | 15.0% |
| !!! | GTTTTGATTTTCAATATATA+GGG | - | chr7.3:24239841-24239860 | MS.gene52323:intron | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr7.3:24238414-24238433 | None:intergenic | 15.0% |
| !!! | TCAACATATTACATTTTTTT+TGG | - | chr7.3:24240222-24240241 | MS.gene52323:intron | 15.0% |
| !!! | TGTTTTGATTTTCAATATAT+AGG | - | chr7.3:24239840-24239859 | MS.gene52323:intron | 15.0% |
| !!! | TTTTTTTTTTCCTTTTTAAG+GGG | + | chr7.3:24238250-24238269 | None:intergenic | 15.0% |
| !! | AAAATCTGGGAATATAATTA+GGG | + | chr7.3:24240157-24240176 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr7.3:24239273-24239292 | MS.gene52323:intron | 20.0% |
| !! | AACTTCTGTCATTATATTTA+GGG | - | chr7.3:24239399-24239418 | MS.gene52323:intron | 20.0% |
| !! | AATGATAGTTATTACTTTGA+AGG | + | chr7.3:24238839-24238858 | None:intergenic | 20.0% |
| !! | ATAAGGAATCTTAATACAAA+AGG | + | chr7.3:24240316-24240335 | None:intergenic | 20.0% |
| !! | ATGATAGTTATTACTTTGAA+GGG | + | chr7.3:24238838-24238857 | None:intergenic | 20.0% |
| !! | CGATATAAAGTTTACTATAA+TGG | - | chr7.3:24238199-24238218 | MS.gene52323:intron | 20.0% |
| !! | GAAAACCCATAAAAATAAAT+GGG | + | chr7.3:24240034-24240053 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr7.3:24237822-24237841 | MS.gene52323:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr7.3:24239272-24239291 | MS.gene52323:intron | 20.0% |
| !! | TAACTTCTGTCATTATATTT+AGG | - | chr7.3:24239398-24239417 | MS.gene52323:intron | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr7.3:24237821-24237840 | MS.gene52323:intron | 20.0% |
| !!! | AAGATTCCTTATAATTTGTA+GGG | - | chr7.3:24240324-24240343 | MS.gene52323:CDS | 20.0% |
| !!! | AATTAATATGTTGCACATTT+TGG | + | chr7.3:24239807-24239826 | None:intergenic | 20.0% |
| !!! | ACATATTACATTTTTTTTGG+TGG | - | chr7.3:24240225-24240244 | MS.gene52323:intron | 20.0% |
| !!! | ACATTGAAGACTTTTAATAT+CGG | - | chr7.3:24240453-24240472 | MS.gene52323:intron | 20.0% |
| !!! | CAAATTTTGCGATAATTTTT+TGG | - | chr7.3:24239177-24239196 | MS.gene52323:intron | 20.0% |
| !!! | CTCTTTTTATAAGATATCTT+TGG | + | chr7.3:24238010-24238029 | None:intergenic | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr7.3:24238662-24238681 | None:intergenic | 20.0% |
| !!! | TAAGATTCCTTATAATTTGT+AGG | - | chr7.3:24240323-24240342 | MS.gene52323:CDS | 20.0% |
| !!! | TGAAACCCATTTATTTTTAT+GGG | - | chr7.3:24240026-24240045 | MS.gene52323:intron | 20.0% |
| ! | AAAAGTCTTCAATGTTTGAA+GGG | + | chr7.3:24240448-24240467 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr7.3:24238703-24238722 | MS.gene52323:intron | 25.0% |
| ! | AAACGACTATAATTTAGAGA+TGG | + | chr7.3:24237689-24237708 | None:intergenic | 25.0% |
| ! | AAATCTGGGAATATAATTAG+GGG | + | chr7.3:24240156-24240175 | None:intergenic | 25.0% |
| ! | AATCAACAATATCTTCTTGT+AGG | + | chr7.3:24240491-24240510 | None:intergenic | 25.0% |
| ! | ACTTCTGTCATTATATTTAG+GGG | - | chr7.3:24239400-24239419 | MS.gene52323:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr7.3:24239306-24239325 | MS.gene52323:intron | 25.0% |
| ! | ATAGAAATGACACAAAATCT+GGG | + | chr7.3:24240170-24240189 | None:intergenic | 25.0% |
| ! | CAAAATCTGGGAATATAATT+AGG | + | chr7.3:24240158-24240177 | None:intergenic | 25.0% |
| ! | CTCTAAATTATAGTCGTTTA+AGG | - | chr7.3:24237690-24237709 | MS.gene52323:intron | 25.0% |
| ! | GGAAAACCCATAAAAATAAA+TGG | + | chr7.3:24240035-24240054 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr7.3:24238638-24238657 | None:intergenic | 25.0% |
| ! | TAAAAGTCTTCAATGTTTGA+AGG | + | chr7.3:24240449-24240468 | None:intergenic | 25.0% |
| ! | TATAGAAATGACACAAAATC+TGG | + | chr7.3:24240171-24240190 | None:intergenic | 25.0% |
| !! | AGTAGGGTTAATTATGTTTT+TGG | - | chr7.3:24238293-24238312 | MS.gene52323:intron | 25.0% |
| !! | CATAAAAATAAATGGGTTTC+AGG | + | chr7.3:24240027-24240046 | None:intergenic | 25.0% |
| !! | GAGGGAGTATAAAATAAATA+TGG | - | chr7.3:24237946-24237965 | MS.gene52323:intron | 25.0% |
| !! | TACAAGATTGCAATTTTGTA+GGG | + | chr7.3:24238320-24238339 | None:intergenic | 25.0% |
| !! | TGAAGGGTTAATTATGTTTT+TGG | + | chr7.3:24238822-24238841 | None:intergenic | 25.0% |
| !! | TTACAAGATTGCAATTTTGT+AGG | + | chr7.3:24238321-24238340 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr7.3:24238984-24239003 | None:intergenic | 25.0% |
| !!! | CTGAAACCCATTTATTTTTA+TGG | - | chr7.3:24240025-24240044 | MS.gene52323:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr7.3:24238985-24239004 | None:intergenic | 25.0% |
| AAAAACCCAAAAAAATGGGT+TGG | + | chr7.3:24240087-24240106 | None:intergenic | 30.0% | |
| AACCCAAAACCAAATCAAAT+AGG | - | chr7.3:24239456-24239475 | MS.gene52323:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | - | chr7.3:24238779-24238798 | MS.gene52323:intron | 30.0% | |
| AATTAGGGACTAAACTTACA+AGG | - | chr7.3:24239321-24239340 | MS.gene52323:intron | 30.0% | |
| ACCAAACCCTACAAATTATA+AGG | + | chr7.3:24240333-24240352 | None:intergenic | 30.0% | |
| ACCCAAAAAACCCAAAAAAA+TGG | + | chr7.3:24240092-24240111 | None:intergenic | 30.0% | |
| ACCCAAAACCAAATCAAATA+GGG | - | chr7.3:24239457-24239476 | MS.gene52323:intron | 30.0% | |
| ATCAACATTATTGGGTAAGT+GGG | - | chr7.3:24239976-24239995 | MS.gene52323:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr7.3:24239047-24239066 | MS.gene52323:intron | 30.0% | |
| CCACTAACTACAACTAATAA+GGG | + | chr7.3:24237790-24237809 | None:intergenic | 30.0% | |
| CCCAAAAAACCCAAAAAAAT+GGG | + | chr7.3:24240091-24240110 | None:intergenic | 30.0% | |
| GACTATAATTTAGAGATGGA+GGG | + | chr7.3:24237685-24237704 | None:intergenic | 30.0% | |
| GAGTGCAGAAAAACAAAATT+AGG | - | chr7.3:24239305-24239324 | MS.gene52323:intron | 30.0% | |
| GTACAACAATTTGTATGCTT+TGG | - | chr7.3:24239910-24239929 | MS.gene52323:intron | 30.0% | |
| TATCAACATTATTGGGTAAG+TGG | - | chr7.3:24239975-24239994 | MS.gene52323:intron | 30.0% | |
| TCCACTAACTACAACTAATA+AGG | + | chr7.3:24237791-24237810 | None:intergenic | 30.0% | |
| TCTATAGTAGGATGATATAC+AGG | + | chr7.3:24240387-24240406 | None:intergenic | 30.0% | |
| TGTATATCATCCTACTATAG+AGG | - | chr7.3:24240386-24240405 | MS.gene52323:intron | 30.0% | |
| TTTGGTTGAAGAAGCAAAAT+TGG | - | chr7.3:24240347-24240366 | MS.gene52323:intron | 30.0% | |
| ! | AAAACCCAAAAAAATGGGTT+GGG | + | chr7.3:24240086-24240105 | None:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+CGG | - | chr7.3:24238476-24238495 | MS.gene52323:intron | 30.0% |
| ! | TCCTTATAATTTGTAGGGTT+TGG | - | chr7.3:24240329-24240348 | MS.gene52323:intron | 30.0% |
| ! | TGAAGACTTTTAATATCGGT+TGG | - | chr7.3:24240457-24240476 | MS.gene52323:intron | 30.0% |
| ! | TTAACCCTACTTTGAAAGTT+AGG | + | chr7.3:24238284-24238303 | None:intergenic | 30.0% |
| ! | TTGTTGCAGGTATTTTATGA+TGG | + | chr7.3:24239742-24239761 | None:intergenic | 30.0% |
| !! | AAAAAAATGGGTTGGGTAAT+TGG | + | chr7.3:24240079-24240098 | None:intergenic | 30.0% |
| !! | AAAAAATGGGTTGGGTAATT+GGG | + | chr7.3:24240078-24240097 | None:intergenic | 30.0% |
| !! | AATATAATTAGGGGTGTTCA+TGG | + | chr7.3:24240147-24240166 | None:intergenic | 30.0% |
| !! | ATAACCACTTGCTATACTAT+TGG | - | chr7.3:24239503-24239522 | MS.gene52323:intron | 30.0% |
| !! | ATATAATTAGGGGTGTTCAT+GGG | + | chr7.3:24240146-24240165 | None:intergenic | 30.0% |
| !! | GAAGACTTTTAATATCGGTT+GGG | - | chr7.3:24240458-24240477 | MS.gene52323:intron | 30.0% |
| !! | TAACCACTTGCTATACTATT+GGG | - | chr7.3:24239504-24239523 | MS.gene52323:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr7.3:24239337-24239356 | MS.gene52323:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr7.3:24239356-24239337 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr7.3:24239336-24239355 | MS.gene52323:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr7.3:24239355-24239336 | None:intergenic | 30.0% |
| !! | TTATTTTACCTTACCCAAAC+CGG | + | chr7.3:24239487-24239506 | None:intergenic | 30.0% |
| !!! | AATTACCCAACCCATTTTTT+TGG | - | chr7.3:24240078-24240097 | MS.gene52323:intron | 30.0% |
| !!! | ACCCATTTTTTTGGGTTTTT+TGG | - | chr7.3:24240087-24240106 | MS.gene52323:intron | 30.0% |
| !!! | ACCCTATTTGATTTGGTTTT+GGG | + | chr7.3:24239461-24239480 | None:intergenic | 30.0% |
| !!! | ATTACCCAACCCATTTTTTT+GGG | - | chr7.3:24240079-24240098 | MS.gene52323:intron | 30.0% |
| !!! | ATTTGATTTGGTTTTGGGTT+TGG | + | chr7.3:24239456-24239475 | None:intergenic | 30.0% |
| !!! | ATTTTTTTGGGTTTTTTGGG+TGG | - | chr7.3:24240091-24240110 | MS.gene52323:intron | 30.0% |
| !!! | CCCATTTTTTTGGGTTTTTT+GGG | - | chr7.3:24240088-24240107 | MS.gene52323:intron | 30.0% |
| !!! | TACCCTATTTGATTTGGTTT+TGG | + | chr7.3:24239462-24239481 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr7.3:24238611-24238630 | MS.gene52323:intron | 30.0% |
| !!! | TTTTTTTGGGTTTTTTGGGT+GGG | - | chr7.3:24240092-24240111 | MS.gene52323:intron | 30.0% |
| AACCCAACCCAAAAATTAGT+GGG | + | chr7.3:24239544-24239563 | None:intergenic | 35.0% | |
| AAGAAAAACGAAGGAGGAAA+GGG | - | chr7.3:24237499-24237518 | MS.gene52323:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr7.3:24238907-24238926 | None:intergenic | 35.0% | |
| AATTCATAGCCAAGTATCAC+AGG | - | chr7.3:24240538-24240557 | MS.gene52323:CDS | 35.0% | |
| ACTCATTGAGATAGAGACAT+TGG | - | chr7.3:24240647-24240666 | MS.gene52323:CDS | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr7.3:24237801-24237820 | MS.gene52323:intron | 35.0% | |
| ATTCATAGCCAAGTATCACA+GGG | - | chr7.3:24240539-24240558 | MS.gene52323:CDS | 35.0% | |
| CCCTTATTAGTTGTAGTTAG+TGG | - | chr7.3:24237787-24237806 | MS.gene52323:intron | 35.0% | |
| CCTACCTAACTTTCAAAGTA+GGG | - | chr7.3:24238277-24238296 | MS.gene52323:intron | 35.0% | |
| CGACTATAATTTAGAGATGG+AGG | + | chr7.3:24237686-24237705 | None:intergenic | 35.0% | |
| GACAATTATTGTGAGACAGA+GGG | - | chr7.3:24237928-24237947 | MS.gene52323:intron | 35.0% | |
| TCATGGATGAATTGTTCTCA+AGG | - | chr7.3:24240604-24240623 | MS.gene52323:CDS | 35.0% | |
| TCCTACCTAACTTTCAAAGT+AGG | - | chr7.3:24238276-24238295 | MS.gene52323:intron | 35.0% | |
| TCGTCATATTCCCCTTAAAA+AGG | - | chr7.3:24238237-24238256 | MS.gene52323:intron | 35.0% | |
| TGACAATTATTGTGAGACAG+AGG | - | chr7.3:24237927-24237946 | MS.gene52323:intron | 35.0% | |
| TGTCTTATATTTAGGGACGA+AGG | - | chr7.3:24238050-24238069 | MS.gene52323:intron | 35.0% | |
| TGTTTCACTTCCTCTATAGT+AGG | + | chr7.3:24240399-24240418 | None:intergenic | 35.0% | |
| TTGTCGATAGCAAAATGAGA+GGG | - | chr7.3:24240514-24240533 | MS.gene52323:CDS | 35.0% | |
| ! | AGGGTACAATTTGCATGTTT+TGG | - | chr7.3:24239860-24239879 | MS.gene52323:intron | 35.0% |
| ! | GATCTGTTTTCAGATCTAGT+TGG | + | chr7.3:24237300-24237319 | None:intergenic | 35.0% |
| ! | GGACAAACCCACTAATTTTT+GGG | - | chr7.3:24239534-24239553 | MS.gene52323:intron | 35.0% |
| ! | GTGGGTATGGTTTCTAAAAA+TGG | + | chr7.3:24240056-24240075 | None:intergenic | 35.0% |
| ! | TATGAACCTCTTTTCATAGC+CGG | - | chr7.3:24240567-24240586 | MS.gene52323:CDS | 35.0% |
| ! | TGGACAAACCCACTAATTTT+TGG | - | chr7.3:24239533-24239552 | MS.gene52323:intron | 35.0% |
| !! | ACAAGGTCGCTATTTTATAG+GGG | - | chr7.3:24239338-24239357 | MS.gene52323:intron | 35.0% |
| !! | ATGCAACTTTAGTTTGTTGC+AGG | + | chr7.3:24239755-24239774 | None:intergenic | 35.0% |
| !! | ATTATATTTAGGGGTGTTCG+TGG | - | chr7.3:24239409-24239428 | MS.gene52323:intron | 35.0% |
| !! | TTAGAGAGAGAAAGCGTTTA+TGG | - | chr7.3:24237558-24237577 | MS.gene52323:intron | 35.0% |
| !! | TTATATTTAGGGGTGTTCGT+GGG | - | chr7.3:24239410-24239429 | MS.gene52323:intron | 35.0% |
| !!! | AAACCCACTAATTTTTGGGT+TGG | - | chr7.3:24239538-24239557 | MS.gene52323:intron | 35.0% |
| !!! | AACCCACTAATTTTTGGGTT+GGG | - | chr7.3:24239539-24239558 | MS.gene52323:intron | 35.0% |
| !!! | ATTGGGTAAGTGGGTTTTTT+GGG | - | chr7.3:24239985-24240004 | MS.gene52323:intron | 35.0% |
| !!! | GAGTGCAGAAGTTTTTTGTA+GGG | - | chr7.3:24238735-24238754 | MS.gene52323:intron | 35.0% |
| !!! | TATTGGGTAAGTGGGTTTTT+TGG | - | chr7.3:24239984-24240003 | MS.gene52323:intron | 35.0% |
| !!! | TGAGTGCAGAAGTTTTTTGT+AGG | - | chr7.3:24238734-24238753 | MS.gene52323:intron | 35.0% |
| !!! | TGTTTTTGGTCCCTACAAAA+TGG | + | chr7.3:24238326-24238307 | None:intergenic | 35.0% |
| AAACAAGTGATTGAGGCAGA+AGG | - | chr7.3:24240414-24240433 | MS.gene52323:intron | 40.0% | |
| ACAGAAACTGGACATGAAAC+CGG | - | chr7.3:24237327-24237346 | MS.gene52323:CDS | 40.0% | |
| ACATCTTGAGTGGTTGGATT+TGG | - | chr7.3:24237468-24237487 | MS.gene52323:intron | 40.0% | |
| AGAAAAACGAAGGAGGAAAG+GGG | - | chr7.3:24237500-24237519 | MS.gene52323:intron | 40.0% | |
| AGTGGTTGGATTTGGATTGT+GGG | - | chr7.3:24237476-24237495 | MS.gene52323:intron | 40.0% | |
| ATAAACAGCCCTGTGATACT+TGG | + | chr7.3:24240550-24240569 | None:intergenic | 40.0% | |
| CAAATCACAAGCTAAAGCCA+AGG | + | chr7.3:24240293-24240312 | None:intergenic | 40.0% | |
| CAACCCAACCCAAAAATTAG+TGG | + | chr7.3:24239545-24239564 | None:intergenic | 40.0% | |
| CAAGATGTAGATTCTAGCAG+CGG | + | chr7.3:24237456-24237475 | None:intergenic | 40.0% | |
| GAAGAAAAACGAAGGAGGAA+AGG | - | chr7.3:24237498-24237517 | MS.gene52323:intron | 40.0% | |
| GAATCTACATCTTGAGTGGT+TGG | - | chr7.3:24237462-24237481 | MS.gene52323:intron | 40.0% | |
| GATTGTGGGAAGAAAAACGA+AGG | - | chr7.3:24237490-24237509 | MS.gene52323:intron | 40.0% | |
| GCTAGAATCTACATCTTGAG+TGG | - | chr7.3:24237458-24237477 | MS.gene52323:intron | 40.0% | |
| GGAAGTGAAACAAGTGATTG+AGG | - | chr7.3:24240407-24240426 | MS.gene52323:intron | 40.0% | |
| GTTCTCAAGGTTTGCAAATC+TGG | - | chr7.3:24240617-24240636 | MS.gene52323:CDS | 40.0% | |
| GTTGTCGATAGCAAAATGAG+AGG | - | chr7.3:24240513-24240532 | MS.gene52323:CDS | 40.0% | |
| TGTCGATAGCAAAATGAGAG+GGG | - | chr7.3:24240515-24240534 | MS.gene52323:CDS | 40.0% | |
| TTCATGTCCAGTTTCTGTTG+CGG | + | chr7.3:24237325-24237344 | None:intergenic | 40.0% | |
| ! | ATGAACCTCTTTTCATAGCC+GGG | - | chr7.3:24240568-24240587 | MS.gene52323:CDS | 40.0% |
| ! | CATGATGTTTTCTCCAAACC+CGG | + | chr7.3:24240589-24240608 | None:intergenic | 40.0% |
| ! | CCAAATCAAATAGGGTACTC+CGG | - | chr7.3:24239465-24239484 | MS.gene52323:intron | 40.0% |
| ! | CCCTACTTTGAAAGTTAGGT+AGG | + | chr7.3:24238280-24238299 | None:intergenic | 40.0% |
| ! | CTGTTTTCAGATCTAGTTGG+AGG | + | chr7.3:24237297-24237316 | None:intergenic | 40.0% |
| ! | TTTTCAGATCTAGTTGGAGG+AGG | + | chr7.3:24237294-24237313 | None:intergenic | 40.0% |
| !! | CACTTGCTATACTATTGGGT+GGG | - | chr7.3:24239508-24239527 | MS.gene52323:intron | 40.0% |
| !! | TACAAGGTCGCCATTTTGTA+GGG | - | chr7.3:24238795-24238814 | MS.gene52323:intron | 40.0% |
| !! | TTACAAGGTCGCCATTTTGT+AGG | - | chr7.3:24238794-24238813 | MS.gene52323:intron | 40.0% |
| !!! | ATTTTTGGGTTGGGTTGGAT+TGG | - | chr7.3:24239548-24239567 | MS.gene52323:intron | 40.0% |
| !!! | CACTAATTTTTGGGTTGGGT+TGG | - | chr7.3:24239543-24239562 | MS.gene52323:intron | 40.0% |
| !!! | TGGGTTTGACCAGGTTTTTT+GGG | - | chr7.3:24240111-24240130 | MS.gene52323:intron | 40.0% |
| !!! | TTTTTGGGTTGGGTTGGATT+GGG | - | chr7.3:24239549-24239568 | MS.gene52323:intron | 40.0% |
| AAACCGGAGTGAACAGTGAA+CGG | - | chr7.3:24237386-24237405 | MS.gene52323:intron | 45.0% | |
| ACCAAAGCACAATCCAACAG+CGG | - | chr7.3:24237114-24237133 | MS.gene52323:CDS | 45.0% | |
| AGATCTGTGCAGATCTGTGT+TGG | + | chr7.3:24237204-24237223 | None:intergenic | 45.0% | |
| CCACCCAATAGTATAGCAAG+TGG | + | chr7.3:24239510-24239529 | None:intergenic | 45.0% | |
| CGGGTTTGGAGAAAACATCA+TGG | - | chr7.3:24240587-24240606 | MS.gene52323:CDS | 45.0% | |
| GAAAAACGAAGGAGGAAAGG+GGG | - | chr7.3:24237501-24237520 | MS.gene52323:intron | 45.0% | |
| GAAGTGTAGAGAGAAGTCAG+AGG | - | chr7.3:24237525-24237544 | MS.gene52323:intron | 45.0% | |
| GAGTGGTTGGATTTGGATTG+TGG | - | chr7.3:24237475-24237494 | MS.gene52323:intron | 45.0% | |
| TGTGGGAAGAAAAACGAAGG+AGG | - | chr7.3:24237493-24237512 | MS.gene52323:intron | 45.0% | |
| TTGGGTCAACCCAAAAAACC+TGG | + | chr7.3:24240123-24240142 | None:intergenic | 45.0% | |
| ! | CAAATAGGGTACTCCGGTTT+GGG | - | chr7.3:24239471-24239490 | MS.gene52323:intron | 45.0% |
| ! | CCGGAGTACCCTATTTGATT+TGG | + | chr7.3:24239468-24239487 | None:intergenic | 45.0% |
| ! | GCTATACTATTGGGTGGGTT+TGG | - | chr7.3:24239513-24239532 | MS.gene52323:intron | 45.0% |
| ! | TCAAATAGGGTACTCCGGTT+TGG | - | chr7.3:24239470-24239489 | MS.gene52323:intron | 45.0% |
| !! | AAATGGGTTGGGTAATTGGG+TGG | + | chr7.3:24240075-24240094 | None:intergenic | 45.0% |
| !! | AATGGGTTGGGTAATTGGGT+GGG | + | chr7.3:24240074-24240093 | None:intergenic | 45.0% |
| !! | AATTAGGGGTGTTCATGGGT+TGG | + | chr7.3:24240142-24240161 | None:intergenic | 45.0% |
| !! | ATTAGGGGTGTTCATGGGTT+GGG | + | chr7.3:24240141-24240160 | None:intergenic | 45.0% |
| !! | CCACTTGCTATACTATTGGG+TGG | - | chr7.3:24239507-24239526 | MS.gene52323:intron | 45.0% |
| !! | GTTGGGTTGGATTGGGTAAT+GGG | - | chr7.3:24239556-24239575 | MS.gene52323:intron | 45.0% |
| !!! | GTGGGTTTGACCAGGTTTTT+TGG | - | chr7.3:24240110-24240129 | MS.gene52323:intron | 45.0% |
| !!! | TTTTTTGGGTGGGTTTGACC+AGG | - | chr7.3:24240102-24240121 | MS.gene52323:intron | 45.0% |
| !! | AAAAAAATAGAAAAATAAAT+TGG | + | chr7.3:24239586-24239605 | None:intergenic | 5.0% |
| !! | AAAAAATAGAAAAATAAATT+GGG | + | chr7.3:24239585-24239604 | None:intergenic | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr7.3:24238952-24238971 | None:intergenic | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr7.3:24238951-24238970 | None:intergenic | 5.0% |
| AACGGAGATGCTGAAGAAGG+TGG | - | chr7.3:24237404-24237423 | MS.gene52323:intron | 50.0% | |
| AGATCAGCCGCAACAGAAAC+TGG | - | chr7.3:24237315-24237334 | MS.gene52323:CDS | 50.0% | |
| AGATGCTGAAGAAGGTGGTG+CGG | - | chr7.3:24237409-24237428 | MS.gene52323:intron | 50.0% | |
| AGGTGAGATGGTCACGGATT+AGG | + | chr7.3:24237274-24237293 | None:intergenic | 50.0% | |
| ATTAGGTGGTTTCGGTGGTG+GGG | + | chr7.3:24237257-24237276 | None:intergenic | 50.0% | |
| CCAAACCCGGCTATGAAAAG+AGG | + | chr7.3:24240576-24240595 | None:intergenic | 50.0% | |
| GATGTAGATTCTAGCAGCGG+TGG | + | chr7.3:24237453-24237472 | None:intergenic | 50.0% | |
| GATTAGGTGGTTTCGGTGGT+GGG | + | chr7.3:24237258-24237277 | None:intergenic | 50.0% | |
| GCAACGAAACGAAACGCGAA+TGG | - | chr7.3:24237349-24237368 | MS.gene52323:CDS | 50.0% | |
| GCTGTTGGATTGTGCTTTGG+TGG | + | chr7.3:24237115-24237134 | None:intergenic | 50.0% | |
| GGAGCAAAACGAAGCCAAAC+CGG | - | chr7.3:24237370-24237389 | MS.gene52323:CDS | 50.0% | |
| GTGAACGGAGATGCTGAAGA+AGG | - | chr7.3:24237401-24237420 | MS.gene52323:intron | 50.0% | |
| GTTCACTGTTCACTCCGGTT+TGG | + | chr7.3:24237387-24237406 | None:intergenic | 50.0% | |
| GTTGGGTAATTGGGTGGGTA+TGG | + | chr7.3:24240069-24240088 | None:intergenic | 50.0% | |
| TCTAGTTGGAGGAGGTGAGA+TGG | + | chr7.3:24237286-24237305 | None:intergenic | 50.0% | |
| TCTCCGTTCACTGTTCACTC+CGG | + | chr7.3:24237392-24237411 | None:intergenic | 50.0% | |
| TTCGCGTTTCGTTTCGTTGC+CGG | + | chr7.3:24237349-24237368 | None:intergenic | 50.0% | |
| ! | CCTCTTTTCATAGCCGGGTT+TGG | - | chr7.3:24240573-24240592 | MS.gene52323:CDS | 50.0% |
| !! | ATTTAGGGGTGTTCGTGGGT+GGG | - | chr7.3:24239414-24239433 | MS.gene52323:intron | 50.0% |
| !! | GGTCACGGATTAGGTGGTTT+CGG | + | chr7.3:24237265-24237284 | None:intergenic | 50.0% |
| !! | GGTTGGGTTGGATTGGGTAA+TGG | - | chr7.3:24239555-24239574 | MS.gene52323:intron | 50.0% |
| !! | TATTTAGGGGTGTTCGTGGG+TGG | - | chr7.3:24239413-24239432 | MS.gene52323:intron | 50.0% |
| !! | TGAGATGGTCACGGATTAGG+TGG | + | chr7.3:24237271-24237290 | None:intergenic | 50.0% |
| !! | TTGGTTTTCCTCCTTCCTGG+CGG | + | chr7.3:24237185-24237204 | None:intergenic | 50.0% |
| !!! | GTGTTGGTTTTCCTCCTTCC+TGG | + | chr7.3:24237188-24237207 | None:intergenic | 50.0% |
| AAGAAGGTGGTGCGGAGACA+AGG | - | chr7.3:24237417-24237436 | MS.gene52323:intron | 55.0% | |
| ACAATCCAACAGCGGCAGCT+TGG | - | chr7.3:24237122-24237141 | MS.gene52323:CDS | 55.0% | |
| GCCGCTGTTGGATTGTGCTT+TGG | + | chr7.3:24237118-24237137 | None:intergenic | 55.0% | |
| GGATTAGGTGGTTTCGGTGG+TGG | + | chr7.3:24237259-24237278 | None:intergenic | 55.0% | |
| TGGAGGAGGTGAGATGGTCA+CGG | + | chr7.3:24237280-24237299 | None:intergenic | 55.0% | |
| ! | GTGCTTTGGTGGTCGCGTTT+CGG | + | chr7.3:24237104-24237123 | None:intergenic | 55.0% |
| ! | TTAGGTGGTTTCGGTGGTGG+GGG | + | chr7.3:24237256-24237275 | None:intergenic | 55.0% |
| ! | TTCGTGGGTGGGTTTGGGTT+GGG | - | chr7.3:24239425-24239444 | MS.gene52323:intron | 55.0% |
| !! | AGGGTACTCCGGTTTGGGTA+AGG | - | chr7.3:24239476-24239495 | MS.gene52323:intron | 55.0% |
| !! | CACGGATTAGGTGGTTTCGG+TGG | + | chr7.3:24237262-24237281 | None:intergenic | 55.0% |
| AAGCACAACCACCGCCAGGA+AGG | - | chr7.3:24237171-24237190 | MS.gene52323:CDS | 60.0% | |
| ACGCTGCTACAACCACCGCA+AGG | - | chr7.3:24237078-24237097 | MS.gene52323:CDS | 60.0% | |
| AGCAGTCTGCGCTCTGCTGT+TGG | + | chr7.3:24237054-24237073 | None:intergenic | 60.0% | |
| CTACCACCACCTCACACCAC+CGG | - | chr7.3:24237222-24237241 | MS.gene52323:CDS | 60.0% | |
| GCAGTCTGCGCTCTGCTGTT+GGG | + | chr7.3:24237053-24237072 | None:intergenic | 60.0% | |
| GCGCTCTGCTGTTGGGTGTT+CGG | + | chr7.3:24237046-24237065 | None:intergenic | 60.0% | |
| TGTCACCAAGCTGCCGCTGT+TGG | + | chr7.3:24237130-24237149 | None:intergenic | 60.0% | |
| ! | ACAGAAGCACAACCACCGCC+AGG | - | chr7.3:24237167-24237186 | MS.gene52323:CDS | 60.0% |
| ! | GGGTGTTCGTGGGTGGGTTT+GGG | - | chr7.3:24239420-24239439 | MS.gene52323:intron | 60.0% |
| ! | GTTCGTGGGTGGGTTTGGGT+TGG | - | chr7.3:24239424-24239443 | MS.gene52323:intron | 60.0% |
| ! | GTTTTCCTCCTTCCTGGCGG+TGG | + | chr7.3:24237182-24237201 | None:intergenic | 60.0% |
| !! | GGGTGGGTTTGGGTTGGGTT+TGG | - | chr7.3:24239430-24239449 | MS.gene52323:intron | 60.0% |
| !! | TAGGTGGTTTCGGTGGTGGG+GGG | + | chr7.3:24237255-24237274 | None:intergenic | 60.0% |
| CACAACCACCGCCAGGAAGG+AGG | - | chr7.3:24237174-24237193 | MS.gene52323:CDS | 65.0% | |
| GTGGTCGCGTTTCGGCCTTG+CGG | + | chr7.3:24237096-24237115 | None:intergenic | 65.0% | |
| ! | GCGGCAGCTTGGTGACAGTC+AGG | - | chr7.3:24237133-24237152 | MS.gene52323:CDS | 65.0% |
| ! | GGGGTGTTCGTGGGTGGGTT+TGG | - | chr7.3:24239419-24239438 | MS.gene52323:intron | 65.0% |
| GGTCCGGTGGTGTGAGGTGG+TGG | + | chr7.3:24237228-24237247 | None:intergenic | 70.0% | |
| GGTGGTCCGGTGGTGTGAGG+TGG | + | chr7.3:24237231-24237250 | None:intergenic | 70.0% | |
| GTCGCGTTTCGGCCTTGCGG+TGG | + | chr7.3:24237093-24237112 | None:intergenic | 70.0% | |
| ! | GGTGGTGGTCCGGTGGTGTG+AGG | + | chr7.3:24237234-24237253 | None:intergenic | 70.0% |
| !! | GTGGTTTCGGTGGTGGGGGG+TGG | + | chr7.3:24237252-24237271 | None:intergenic | 70.0% |
| !! | GTTTCGGTGGTGGGGGGTGG+TGG | + | chr7.3:24237249-24237268 | None:intergenic | 70.0% |
| !! | GGTGGTGGGGGGTGGTGGTC+CGG | + | chr7.3:24237244-24237263 | None:intergenic | 75.0% |
| !! | GGTGGGGGGTGGTGGTCCGG+TGG | + | chr7.3:24237241-24237260 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24237035 | 24240710 | 24237035 | ID=MS.gene52323 |
| chr7.3 | mRNA | 24237035 | 24240710 | 24237035 | ID=MS.gene52323.t1;Parent=MS.gene52323 |
| chr7.3 | exon | 24240467 | 24240710 | 24240467 | ID=MS.gene52323.t1.exon1;Parent=MS.gene52323.t1 |
| chr7.3 | CDS | 24240467 | 24240710 | 24240467 | ID=cds.MS.gene52323.t1;Parent=MS.gene52323.t1 |
| chr7.3 | exon | 24240252 | 24240343 | 24240252 | ID=MS.gene52323.t1.exon2;Parent=MS.gene52323.t1 |
| chr7.3 | CDS | 24240252 | 24240343 | 24240252 | ID=cds.MS.gene52323.t1;Parent=MS.gene52323.t1 |
| chr7.3 | exon | 24237035 | 24237400 | 24237035 | ID=MS.gene52323.t1.exon3;Parent=MS.gene52323.t1 |
| chr7.3 | CDS | 24237035 | 24237400 | 24237035 | ID=cds.MS.gene52323.t1;Parent=MS.gene52323.t1 |
| Gene Sequence |
| Protein sequence |
