Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058452.t1 | XP_003588798.2 | 97.1 | 1011 | 28 | 1 | 1 | 1010 | 1 | 1011 | 0.00E+00 | 1813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058452.t1 | Q3S4A7 | 55.9 | 1030 | 325 | 15 | 1 | 1010 | 1 | 921 | 3.7e-289 | 995.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058452.t1 | G7I7J7 | 97.1 | 1011 | 28 | 1 | 1 | 1010 | 1 | 1011 | 0.0e+00 | 1813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene058452.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050444 | MS.gene058452 | -0.800773 | 1.23E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene058452 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene051517 | MS.gene058452 | 0.870916 | 1.02E-66 | -1.69E-46 |
| MS.gene05470 | MS.gene058452 | -0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene058452 | 0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene058452 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene058452 | 0.815364 | 9.60E-52 | -1.69E-46 |
| MS.gene057717 | MS.gene058452 | 0.822122 | 2.81E-53 | -1.69E-46 |
| MS.gene058416 | MS.gene058452 | 0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene058603 | 0.812586 | 3.93E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene060405 | 0.818741 | 1.67E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene061683 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene061777 | 0.833388 | 5.49E-56 | -1.69E-46 |
| MS.gene058452 | MS.gene063148 | 0.815346 | 9.69E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene065424 | 0.821199 | 4.59E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene066309 | 0.811657 | 6.28E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene068585 | 0.812828 | 3.48E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene069871 | 0.814902 | 1.22E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene070268 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene070463 | 0.802948 | 4.40E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene07082 | -0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene071307 | -0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene071308 | -0.831929 | 1.26E-55 | -1.69E-46 |
| MS.gene058452 | MS.gene072378 | 0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene072979 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene073297 | 0.813267 | 2.79E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene074380 | -0.814274 | 1.67E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene07440 | -0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene07839 | 0.800819 | 1.21E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene08402 | 0.811857 | 5.67E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene08407 | 0.824291 | 8.74E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene08658 | 0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene08883 | 0.813833 | 2.10E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene09072 | 0.81017 | 1.32E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene09791 | 0.81186 | 5.67E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene20235 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene21274 | 0.806594 | 7.62E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene22400 | 0.804266 | 2.35E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene24420 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene24521 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene24522 | 0.816464 | 5.46E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene25516 | 0.824418 | 8.16E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene26474 | 0.81668 | 4.88E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene26475 | 0.82813 | 1.07E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene26518 | 0.811455 | 6.94E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene27790 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene28077 | 0.839349 | 1.67E-57 | -1.69E-46 |
| MS.gene058452 | MS.gene28334 | -0.805612 | 1.23E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene29925 | -0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene29927 | -0.82736 | 1.63E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene30459 | 0.808667 | 2.77E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene31867 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene33084 | 0.904193 | 1.58E-79 | -1.69E-46 |
| MS.gene058452 | MS.gene35208 | 0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene35546 | 0.806481 | 8.06E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene35794 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene35795 | 0.827214 | 1.77E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene35853 | 0.847057 | 1.47E-59 | -1.69E-46 |
| MS.gene058452 | MS.gene35931 | 0.822297 | 2.55E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene36354 | 0.834736 | 2.52E-56 | -1.69E-46 |
| MS.gene058452 | MS.gene36841 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene38577 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene38615 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene41367 | 0.822771 | 1.98E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene44249 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene45776 | 0.813348 | 2.68E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene45887 | 0.801299 | 9.62E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene46198 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene47437 | 0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene47882 | 0.82014 | 8.03E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene47883 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene49425 | 0.821217 | 4.54E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene50058 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene50072 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene50620 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene51130 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene51748 | 0.817069 | 3.99E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene52027 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene52323 | 0.842732 | 2.16E-58 | -1.69E-46 |
| MS.gene058452 | MS.gene54709 | -0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene55078 | 0.804892 | 1.74E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene55086 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene55899 | 0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene56240 | 0.828524 | 8.57E-55 | -1.69E-46 |
| MS.gene058452 | MS.gene56389 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene57291 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene058452 | MS.gene57587 | -0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene57588 | -0.819878 | 9.22E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene57590 | -0.80366 | 3.13E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene58720 | 0.813653 | 2.30E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene59037 | 0.820928 | 5.29E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene59415 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene60041 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene65040 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene65822 | 0.818914 | 1.53E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene68071 | -0.80262 | 5.15E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene68203 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene68849 | 0.803648 | 3.15E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene68946 | 0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene69635 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene73164 | 0.823936 | 1.06E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene73788 | 0.818284 | 2.12E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene75365 | 0.833437 | 5.33E-56 | -1.69E-46 |
| MS.gene058452 | MS.gene76536 | 0.823208 | 1.57E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene77859 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene78250 | 0.83502 | 2.14E-56 | -1.69E-46 |
| MS.gene058452 | MS.gene79518 | 0.805766 | 1.14E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene81577 | 0.819826 | 9.47E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene81725 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene84157 | 0.818806 | 1.62E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene85152 | 0.836735 | 7.86E-57 | -1.69E-46 |
| MS.gene058452 | MS.gene88812 | -0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene91317 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene92089 | 0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene92334 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene92392 | 0.817305 | 3.53E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene93105 | 0.830155 | 3.44E-55 | -1.69E-46 |
| MS.gene058452 | MS.gene95132 | 0.815856 | 7.46E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene95478 | 0.817391 | 3.38E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene96299 | 0.813881 | 2.04E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene96335 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene97131 | 0.803456 | 3.46E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene98077 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene058452 | MS.gene98078 | 0.807906 | 4.02E-50 | -1.69E-46 |
| MS.gene058452 | MS.gene98480 | 0.801843 | 7.44E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058452.t1 | MTR_1g013360 | 98.516 | 1011 | 14 | 1 | 1 | 1010 | 1 | 1011 | 0.0 | 2071 |
| MS.gene058452.t1 | MTR_3g105590 | 69.185 | 1019 | 232 | 15 | 5 | 1011 | 1 | 949 | 0.0 | 1354 |
| MS.gene058452.t1 | MTR_1g014670 | 82.707 | 399 | 58 | 3 | 43 | 441 | 2 | 389 | 0.0 | 655 |
| MS.gene058452.t1 | MTR_3g085130 | 35.220 | 318 | 171 | 7 | 379 | 695 | 240 | 523 | 1.60e-41 | 165 |
| MS.gene058452.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 698 | 822 | 2.32e-13 | 75.1 |
| MS.gene058452.t1 | MTR_3g085130 | 35.220 | 318 | 171 | 7 | 379 | 695 | 450 | 733 | 8.65e-41 | 163 |
| MS.gene058452.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 908 | 1032 | 7.04e-13 | 73.6 |
| MS.gene058452.t1 | MTR_8g106150 | 34.921 | 315 | 178 | 9 | 379 | 686 | 143 | 437 | 1.38e-38 | 155 |
| MS.gene058452.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 601 | 752 | 1.98e-16 | 84.7 |
| MS.gene058452.t1 | MTR_8g106150 | 34.603 | 315 | 179 | 8 | 379 | 686 | 386 | 680 | 4.19e-38 | 155 |
| MS.gene058452.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 844 | 995 | 2.48e-16 | 84.7 |
| MS.gene058452.t1 | MTR_8g080770 | 33.993 | 303 | 163 | 6 | 379 | 680 | 395 | 661 | 1.52e-37 | 153 |
| MS.gene058452.t1 | MTR_8g080770 | 33.993 | 303 | 163 | 6 | 379 | 680 | 286 | 552 | 1.92e-37 | 152 |
| MS.gene058452.t1 | MTR_5g097410 | 32.237 | 304 | 173 | 6 | 379 | 680 | 620 | 892 | 1.16e-34 | 144 |
| MS.gene058452.t1 | MTR_5g097410 | 31.429 | 140 | 89 | 2 | 858 | 996 | 1065 | 1198 | 2.80e-12 | 71.6 |
| MS.gene058452.t1 | MTR_4g031150 | 38.095 | 147 | 88 | 2 | 380 | 524 | 397 | 542 | 5.01e-24 | 109 |
| MS.gene058452.t1 | MTR_8g075340 | 28.667 | 300 | 165 | 7 | 379 | 676 | 474 | 726 | 8.41e-24 | 109 |
| MS.gene058452.t1 | MTR_8g075340 | 28.346 | 254 | 124 | 8 | 773 | 1004 | 942 | 1159 | 2.64e-11 | 68.6 |
| MS.gene058452.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 1.05e-23 | 108 |
| MS.gene058452.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 1.32e-23 | 108 |
| MS.gene058452.t1 | MTR_5g022470 | 29.592 | 196 | 82 | 4 | 832 | 999 | 1018 | 1185 | 8.78e-11 | 66.6 |
| MS.gene058452.t1 | MTR_7g109150 | 26.608 | 342 | 174 | 10 | 380 | 717 | 348 | 616 | 1.89e-22 | 103 |
| MS.gene058452.t1 | MTR_1g087140 | 27.273 | 330 | 174 | 12 | 381 | 692 | 394 | 675 | 1.16e-16 | 85.9 |
| MS.gene058452.t1 | MTR_1g090850 | 25.956 | 366 | 204 | 12 | 328 | 680 | 337 | 648 | 9.28e-16 | 82.8 |
| MS.gene058452.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 2.83e-11 | 67.8 |
| MS.gene058452.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 4.85e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058452.t1 | AT5G10720 | 56.195 | 1025 | 330 | 19 | 1 | 1010 | 1 | 921 | 0.0 | 1058 |
| MS.gene058452.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.18e-41 | 150 |
| MS.gene058452.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.18e-41 | 150 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 464 | 743 | 2.05e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 936 | 1046 | 2.82e-11 | 68.6 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 475 | 754 | 2.13e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 947 | 1057 | 3.03e-11 | 68.2 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene058452.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene058452.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene058452.t1 | AT1G27320 | 33.993 | 303 | 161 | 6 | 379 | 680 | 453 | 717 | 9.31e-37 | 150 |
| MS.gene058452.t1 | AT1G27320 | 33.083 | 133 | 82 | 3 | 865 | 996 | 888 | 1014 | 5.86e-13 | 73.9 |
| MS.gene058452.t1 | AT5G35750 | 33.550 | 307 | 164 | 6 | 379 | 680 | 590 | 861 | 8.27e-34 | 141 |
| MS.gene058452.t1 | AT5G35750 | 33.333 | 129 | 79 | 3 | 869 | 996 | 1037 | 1159 | 3.04e-12 | 71.6 |
| MS.gene058452.t1 | AT2G17820 | 25.505 | 396 | 224 | 13 | 309 | 697 | 443 | 774 | 4.45e-25 | 113 |
| MS.gene058452.t1 | AT1G66340 | 37.584 | 149 | 91 | 2 | 372 | 518 | 338 | 486 | 8.40e-23 | 105 |
| MS.gene058452.t1 | AT2G47430 | 27.536 | 345 | 194 | 11 | 347 | 680 | 366 | 665 | 2.45e-19 | 94.7 |
| MS.gene058452.t1 | AT2G40940 | 29.545 | 220 | 121 | 6 | 338 | 524 | 282 | 500 | 1.65e-16 | 84.7 |
Find 175 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCACCTGTTGTTAT+TGG | 0.158249 | 1.4:+7222337 | MS.gene058452:CDS |
| AACTTTCGTGCTTAGTTTCT+AGG | 0.186732 | 1.4:-7225831 | None:intergenic |
| GAGATAAGATCGCCACTTTC+TGG | 0.209695 | 1.4:+7223699 | MS.gene058452:CDS |
| TTGGTGAGATTCTTCTTCTT+TGG | 0.219070 | 1.4:-7224692 | None:intergenic |
| CAAACGTCCGGTTTCGATAT+TGG | 0.225048 | 1.4:+7222030 | MS.gene058452:CDS |
| GGAAGTTGAGCAAAGAAAAT+TGG | 0.237386 | 1.4:+7221955 | MS.gene058452:CDS |
| TTGATCACATCTCATACTTC+TGG | 0.237521 | 1.4:-7224782 | None:intergenic |
| TTTGGAACAGGTTGAATTAA+TGG | 0.245842 | 1.4:+7225435 | MS.gene058452:intron |
| ACTGGTCTTCTGTGACCTTT+TGG | 0.259087 | 1.4:-7224711 | None:intergenic |
| TAAAGAGCAAAGACAGCTTT+TGG | 0.270075 | 1.4:+7223764 | MS.gene058452:CDS |
| CTTACAAATTATACAGATAA+AGG | 0.272256 | 1.4:+7221830 | MS.gene058452:CDS |
| CATGTTATCTTCAGGAGATT+TGG | 0.286514 | 1.4:+7223791 | MS.gene058452:CDS |
| AACATATCTTGGTCTCTTCC+TGG | 0.287184 | 1.4:-7221749 | None:intergenic |
| AATAAAACCATTCACATTAC+AGG | 0.292769 | 1.4:+7223529 | MS.gene058452:CDS |
| CCAATTCCAACCACGAACTT+TGG | 0.307599 | 1.4:+7225612 | MS.gene058452:CDS |
| TCTTTGGCAAATGCTGGTTC+TGG | 0.312428 | 1.4:-7224676 | None:intergenic |
| CATTGTTAAACACATGATTC+TGG | 0.316290 | 1.4:-7224843 | None:intergenic |
| GCAGACCATGCTCGAAAATA+TGG | 0.317830 | 1.4:+7225165 | MS.gene058452:CDS |
| AACAATTGGAGTAAACTATA+TGG | 0.319084 | 1.4:+7223324 | MS.gene058452:CDS |
| CAATTCCAACCACGAACTTT+GGG | 0.320655 | 1.4:+7225613 | MS.gene058452:CDS |
| AGTATGATACTGTTGTTTAC+TGG | 0.324129 | 1.4:+7222143 | MS.gene058452:CDS |
| GTTTGAAGACCATTCATAAC+TGG | 0.338515 | 1.4:-7226336 | None:intergenic |
| ACATCAGTTCCAACATCTTC+TGG | 0.341534 | 1.4:-7221701 | None:intergenic |
| ACAAAACCATGATAATAATA+AGG | 0.343332 | 1.4:+7225870 | MS.gene058452:CDS |
| TCGGAGAGAGGATATATTAA+AGG | 0.347750 | 1.4:+7222210 | MS.gene058452:CDS |
| CTATACCTACTTTATTTAGA+AGG | 0.350625 | 1.4:+7225127 | MS.gene058452:CDS |
| ATTCGGCTTTAACGTCGATT+TGG | 0.353565 | 1.4:-7226052 | None:intergenic |
| TCTTCAACAAGAAGAATATT+CGG | 0.358321 | 1.4:-7226069 | None:intergenic |
| TTACTTCTTCCAACATATCT+TGG | 0.359994 | 1.4:-7221760 | None:intergenic |
| GGCTTATTTAATGCAACATT+GGG | 0.361294 | 1.4:+7221865 | MS.gene058452:CDS |
| GCAATGGTGCTGCAGCTGTC+TGG | 0.366539 | 1.4:-7224290 | None:intergenic |
| CCAAAGTTCGTGGTTGGAAT+TGG | 0.374939 | 1.4:-7225612 | None:intergenic |
| AGCATGGATGTCGTGAATAA+TGG | 0.377420 | 1.4:+7226144 | MS.gene058452:CDS |
| TTGGATGTCATGTTATCTTC+AGG | 0.380119 | 1.4:+7223783 | MS.gene058452:CDS |
| CATGCACCTTATTATTATCA+TGG | 0.383722 | 1.4:-7225876 | None:intergenic |
| CTAGAGTTTGCACTACCATT+TGG | 0.384833 | 1.4:-7225907 | None:intergenic |
| CTTATGAAGAAACAGGCAAT+TGG | 0.396625 | 1.4:+7226376 | MS.gene058452:CDS |
| TTCGAGGAAGAGATTAGTTA+TGG | 0.399361 | 1.4:+7222001 | MS.gene058452:CDS |
| ATTACCTCTTCTTGTAAACT+TGG | 0.403224 | 1.4:-7222983 | None:intergenic |
| AACAGTTGGAGGCGAGTATT+CGG | 0.405955 | 1.4:+7222191 | MS.gene058452:CDS |
| AATTGGAAGCTACAAAATTC+AGG | 0.406669 | 1.4:+7224241 | MS.gene058452:CDS |
| GAAGTGTTATATACCTCAAT+AGG | 0.406853 | 1.4:-7224354 | None:intergenic |
| TGATCACATCTCATACTTCT+GGG | 0.407144 | 1.4:-7224781 | None:intergenic |
| TGATGATCCAGATGATCTTT+CGG | 0.409319 | 1.4:+7225549 | MS.gene058452:CDS |
| ACCTGTTGTTATTGGCCATC+AGG | 0.410974 | 1.4:+7222345 | MS.gene058452:CDS |
| AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | 1.4:+7223205 | MS.gene058452:CDS |
| TCTTCTTCTTTGGCAAATGC+TGG | 0.415639 | 1.4:-7224682 | None:intergenic |
| CAGTCAACTATTTCAGCAAA+TGG | 0.416796 | 1.4:+7224730 | MS.gene058452:CDS |
| TCAAGTAACATCATTTCAAA+TGG | 0.417988 | 1.4:+7225727 | MS.gene058452:CDS |
| ATGTATAGGAGCTATGAAAT+TGG | 0.423052 | 1.4:+7224224 | MS.gene058452:intron |
| ATTAGGTCTTATGAAGAAAC+AGG | 0.429646 | 1.4:+7226369 | MS.gene058452:CDS |
| TTGGAACAGGTTGAATTAAT+GGG | 0.430242 | 1.4:+7225436 | MS.gene058452:intron |
| GATCTTTCCAAGGTTGAGTC+AGG | 0.431218 | 1.4:+7223840 | MS.gene058452:CDS |
| CACATTCATACTACCATACA+AGG | 0.433058 | 1.4:+7225504 | MS.gene058452:CDS |
| AAATATGGAGGCACAGGTCT+AGG | 0.436640 | 1.4:+7225180 | MS.gene058452:CDS |
| TCGAGGAAGAGATTAGTTAT+GGG | 0.438884 | 1.4:+7222002 | MS.gene058452:CDS |
| AAGATCTACCGGCGGCGATA+AGG | 0.439631 | 1.4:+7222074 | MS.gene058452:CDS |
| TCAAAATAATGTCGTATGAA+TGG | 0.440366 | 1.4:-7226194 | None:intergenic |
| TTCAAACAACAAAACTGATT+AGG | 0.443792 | 1.4:+7226352 | MS.gene058452:CDS |
| AGATAAAGGGTCATCTCAAT+TGG | 0.444089 | 1.4:+7221844 | MS.gene058452:CDS |
| ATAAGCAGGCGAACGCGGTT+CGG | 0.446744 | 1.4:+7221891 | MS.gene058452:CDS |
| CAAGCTGTTGAAACCTTGTA+TGG | 0.450617 | 1.4:-7225517 | None:intergenic |
| TGGGATGCTGCAAGAGAAGC+TGG | 0.451002 | 1.4:+7226396 | MS.gene058452:CDS |
| ATGTAAATATTGCAGGTCAC+TGG | 0.451028 | 1.4:+7224432 | MS.gene058452:intron |
| CGAGGAAGAGATTAGTTATG+GGG | 0.452682 | 1.4:+7222003 | MS.gene058452:CDS |
| TCAGGCCAAGAGAGGTAGTA+AGG | 0.452778 | 1.4:+7224259 | MS.gene058452:CDS |
| TGGCTTATTTAATGCAACAT+TGG | 0.452961 | 1.4:+7221864 | MS.gene058452:CDS |
| AAATGGAACAAATTCAATTG+AGG | 0.453149 | 1.4:+7225744 | MS.gene058452:CDS |
| ACTAGCAATATGTAAACAAC+TGG | 0.455705 | 1.4:+7225203 | MS.gene058452:CDS |
| TTGAAATGATGTTACTTGAA+TGG | 0.456614 | 1.4:-7225723 | None:intergenic |
| AGTGTCTTGAAAAGTATCTA+AGG | 0.457868 | 1.4:+7226804 | MS.gene058452:CDS |
| AGATTCCTTCACACCTGCTC+CGG | 0.458251 | 1.4:-7223173 | None:intergenic |
| CTGGTTCTGGAACAACATAA+AGG | 0.460292 | 1.4:-7224663 | None:intergenic |
| TCGACATCCGAAAGATCATC+TGG | 0.460612 | 1.4:-7225556 | None:intergenic |
| CAGAAAATGTTAACATTGGA+AGG | 0.461173 | 1.4:+7224312 | MS.gene058452:CDS |
| ACAATTGGAGTAAACTATAT+GGG | 0.461326 | 1.4:+7223325 | MS.gene058452:CDS |
| AGCAAGGCAGGTGAAACAAT+TGG | 0.462061 | 1.4:+7223310 | MS.gene058452:CDS |
| GATTAAACCTGTAATGTGAA+TGG | 0.463646 | 1.4:-7223536 | None:intergenic |
| CTCTACTTGCTTCATTACAT+TGG | 0.472879 | 1.4:-7225930 | None:intergenic |
| AGATTCTTACAAATTTAGTC+AGG | 0.474911 | 1.4:+7224475 | MS.gene058452:CDS |
| ACATGCCTTACTACCTCTCT+TGG | 0.479070 | 1.4:-7224264 | None:intergenic |
| CTATACATGGCAAGATCTAC+CGG | 0.482979 | 1.4:+7222063 | MS.gene058452:CDS |
| TGAACCACAACAAACATGTC+AGG | 0.483397 | 1.4:+7225978 | MS.gene058452:CDS |
| GTTTACATGCCAGTTATGAA+TGG | 0.483418 | 1.4:+7226327 | MS.gene058452:CDS |
| AGAATGTTTCGCCAACGGTA+TGG | 0.484664 | 1.4:+7226739 | MS.gene058452:CDS |
| ACCTGATGGCCAATAACAAC+AGG | 0.484985 | 1.4:-7222346 | None:intergenic |
| ACTTTCTGGTGTTGTTAGCA+TGG | 0.486916 | 1.4:+7223713 | MS.gene058452:CDS |
| TTACAAATTATACAGATAAA+GGG | 0.487288 | 1.4:+7221831 | MS.gene058452:CDS |
| TTATGAAGAAACAGGCAATT+GGG | 0.491132 | 1.4:+7226377 | MS.gene058452:CDS |
| GGGAATGGAAATAACAGATC+AGG | 0.491945 | 1.4:+7223345 | MS.gene058452:CDS |
| AGAATCTCACACAAGTTCAA+TGG | 0.492632 | 1.4:+7225673 | MS.gene058452:CDS |
| AAACAAGAGAATTGAAATTG+AGG | 0.492797 | 1.4:+7222117 | MS.gene058452:CDS |
| TATTTCAGCAAATGGATTGA+AGG | 0.494958 | 1.4:+7224738 | MS.gene058452:CDS |
| GAACCTGTGTTTAGCAAGGC+AGG | 0.495935 | 1.4:+7223298 | MS.gene058452:CDS |
| CTTTGAAAATCAGCTATAGC+TGG | 0.498599 | 1.4:-7221797 | None:intergenic |
| GATGTGTACGACACTGGAAT+TGG | 0.499123 | 1.4:+7224958 | MS.gene058452:CDS |
| GAGAAAGAATGGCAAAGCTA+AGG | 0.499190 | 1.4:+7223467 | MS.gene058452:CDS |
| TTTCTAACCTGACTCAACCT+TGG | 0.509156 | 1.4:-7223847 | None:intergenic |
| AAGCACGAAAGTTTATGTAA+TGG | 0.515480 | 1.4:+7225841 | MS.gene058452:CDS |
| GCATCGTCCAATATCGAAAC+CGG | 0.516844 | 1.4:-7222037 | None:intergenic |
| AGATAACAAGATTAATATCA+TGG | 0.517181 | 1.4:+7226089 | MS.gene058452:CDS |
| GTTTGAAATGGTTTGTGAGA+TGG | 0.519841 | 1.4:+7221625 | None:intergenic |
| GTGTGAGATTCTATGAGGCC+TGG | 0.520618 | 1.4:-7225662 | None:intergenic |
| TAAAGAGAATAATCGATTCG+AGG | 0.522514 | 1.4:+7221985 | MS.gene058452:CDS |
| AGGAAGAGACCAAGATATGT+TGG | 0.524319 | 1.4:+7221751 | MS.gene058452:CDS |
| ATTGCAGAAAATGTTAACAT+TGG | 0.525478 | 1.4:+7224308 | MS.gene058452:CDS |
| GAAGATGTTGGAACTGATGT+TGG | 0.527223 | 1.4:+7221704 | MS.gene058452:CDS |
| AGAAGAAGAATCTCACCAAA+AGG | 0.528810 | 1.4:+7224696 | MS.gene058452:CDS |
| AATGAGAGCAAAACAAATGC+TGG | 0.532235 | 1.4:+7223662 | MS.gene058452:CDS |
| ATGGCTCTGAACTGCGCGTA+TGG | 0.532419 | 1.4:-7226175 | None:intergenic |
| TTTACACATCAAGGCAAAGT+TGG | 0.534123 | 1.4:+7224634 | MS.gene058452:CDS |
| GCTCGAAAATATGGAGGCAC+AGG | 0.535185 | 1.4:+7225174 | MS.gene058452:CDS |
| CATTTGCTGAAATAGTTGAC+TGG | 0.538486 | 1.4:-7224729 | None:intergenic |
| ATCTGTGACAGTTCCTCCAC+AGG | 0.539752 | 1.4:-7222277 | None:intergenic |
| GCTGTCAAGTTTACACATCA+AGG | 0.539918 | 1.4:+7224625 | MS.gene058452:CDS |
| TTAAACACATGATTCTGGAT+AGG | 0.541070 | 1.4:-7224838 | None:intergenic |
| TGATATACTTGATCTTTCCA+AGG | 0.542061 | 1.4:+7223830 | MS.gene058452:CDS |
| AGCCGATGATATACCTATTG+AGG | 0.543862 | 1.4:+7224341 | MS.gene058452:CDS |
| AAAAGCGAGCCCAAAGTTCG+TGG | 0.544177 | 1.4:-7225622 | None:intergenic |
| TTTGAGTAAGAATCGTTGTC+CGG | 0.544394 | 1.4:-7225700 | None:intergenic |
| TGGACGATGCTTACTATACA+TGG | 0.547039 | 1.4:+7222050 | MS.gene058452:CDS |
| ATGCTAACAACACCAGAAAG+TGG | 0.550524 | 1.4:-7223711 | None:intergenic |
| AACAAACATGTCAGGGTCAA+GGG | 0.550696 | 1.4:+7225986 | MS.gene058452:CDS |
| GCGAGCCCAAAGTTCGTGGT+TGG | 0.551447 | 1.4:-7225618 | None:intergenic |
| TACAAAATTCAGGCCAAGAG+AGG | 0.552848 | 1.4:+7224251 | MS.gene058452:CDS |
| TGGAGTAAACTATATGGGAA+TGG | 0.555183 | 1.4:+7223330 | MS.gene058452:CDS |
| GTGCATGATAGCTTACCAAA+TGG | 0.555791 | 1.4:+7225892 | MS.gene058452:CDS |
| GACACTGGAATTGGCATACC+AGG | 0.557084 | 1.4:+7224967 | MS.gene058452:CDS |
| GCAACATTGGGAGTATAAGC+AGG | 0.560108 | 1.4:+7221877 | MS.gene058452:CDS |
| TGACCCTGACATGTTTGTTG+TGG | 0.560232 | 1.4:-7225982 | None:intergenic |
| AGAAAGAATGGCAAAGCTAA+GGG | 0.561686 | 1.4:+7223468 | MS.gene058452:CDS |
| TGGAACAGGTTGAATTAATG+GGG | 0.566185 | 1.4:+7225437 | MS.gene058452:intron |
| CAACAAACATGTCAGGGTCA+AGG | 0.567768 | 1.4:+7225985 | MS.gene058452:CDS |
| CAATCTTAGCAAACAAAGGA+AGG | 0.568976 | 1.4:+7221934 | MS.gene058452:CDS |
| CACAAATGCGTCCATACCGT+TGG | 0.570023 | 1.4:-7226750 | None:intergenic |
| ACACATGATTCTGGATAGGA+TGG | 0.570041 | 1.4:-7224834 | None:intergenic |
| CGTTGTGATGTGTACGACAC+TGG | 0.576348 | 1.4:+7224952 | MS.gene058452:CDS |
| ATGTACCTTCTAAATAAAGT+AGG | 0.578318 | 1.4:-7225132 | None:intergenic |
| AACTTGTGTGAGATTCTATG+AGG | 0.581575 | 1.4:-7225667 | None:intergenic |
| TCACTTCTAATGGATCCACC+AGG | 0.589068 | 1.4:+7225644 | MS.gene058452:CDS |
| TCACCTGCCTTGCTAAACAC+AGG | 0.591633 | 1.4:-7223301 | None:intergenic |
| AAGTCAATGATGAAGCAGCT+AGG | 0.595119 | 1.4:+7226117 | MS.gene058452:CDS |
| GAGGAAGAGATTAGTTATGG+GGG | 0.595191 | 1.4:+7222004 | MS.gene058452:CDS |
| TACCTCAATAGGTATATCAT+CGG | 0.595988 | 1.4:-7224343 | None:intergenic |
| CATCTCATACTTCTGGGTGA+TGG | 0.595990 | 1.4:-7224775 | None:intergenic |
| TTTCACCGGAGCAGGTGTGA+AGG | 0.596051 | 1.4:+7223168 | MS.gene058452:CDS |
| AACATGTCAGGGTCAAGGGA+AGG | 0.598087 | 1.4:+7225990 | MS.gene058452:CDS |
| GGAGGCGAGTATTCGGAGAG+AGG | 0.602582 | 1.4:+7222198 | MS.gene058452:CDS |
| TTGACAATCTTAGCAAACAA+AGG | 0.607034 | 1.4:+7221930 | MS.gene058452:CDS |
| TGTAGAACCTGTGTTTAGCA+AGG | 0.614185 | 1.4:+7223294 | MS.gene058452:CDS |
| TGATTGTATTGAAGACATGA+TGG | 0.615316 | 1.4:+7221652 | MS.gene058452:CDS |
| TTGGAATTGGAAGAATCCCT+CGG | 0.616918 | 1.4:-7225599 | None:intergenic |
| GAAGCAGCTAGGATATAGCA+TGG | 0.617920 | 1.4:+7226128 | MS.gene058452:CDS |
| GCTGAAGAATGTTTCGCCAA+CGG | 0.618188 | 1.4:+7226734 | MS.gene058452:CDS |
| TCAATGTGGCCAGAAGATGT+TGG | 0.623443 | 1.4:+7221692 | MS.gene058452:CDS |
| GAACCACAACAAACATGTCA+GGG | 0.628011 | 1.4:+7225979 | MS.gene058452:CDS |
| CTGTTGTTTACTGGAAACAA+CGG | 0.636650 | 1.4:+7222152 | MS.gene058452:CDS |
| GGAACAGGTTGAATTAATGG+GGG | 0.643012 | 1.4:+7225438 | MS.gene058452:intron |
| TGAGATTCTATGAGGCCTGG+TGG | 0.645843 | 1.4:-7225659 | None:intergenic |
| AAGACAATCATCACCTGTGG+AGG | 0.647566 | 1.4:+7222264 | MS.gene058452:CDS |
| AATTGCAGTTCAGAAAGCAA+AGG | 0.648370 | 1.4:+7223495 | MS.gene058452:CDS |
| GGAGTATAAGCAGGCGAACG+CGG | 0.650670 | 1.4:+7221886 | MS.gene058452:CDS |
| TGAAAGACAATCATCACCTG+TGG | 0.652639 | 1.4:+7222261 | MS.gene058452:CDS |
| AAAGCGCATCCACATTGTTG+CGG | 0.653392 | 1.4:+7226467 | MS.gene058452:CDS |
| TTGAAGAGTTATCTTCAATG+TGG | 0.654257 | 1.4:+7221678 | MS.gene058452:CDS |
| AACGAAGATGACACAACCGA+GGG | 0.659560 | 1.4:+7225583 | MS.gene058452:CDS |
| GACCATGCTCGAAAATATGG+AGG | 0.667505 | 1.4:+7225168 | MS.gene058452:CDS |
| GAACAGGTTGAATTAATGGG+GGG | 0.672744 | 1.4:+7225439 | MS.gene058452:intron |
| GGATGTCGTGAATAATGGAG+TGG | 0.687300 | 1.4:+7226149 | MS.gene058452:CDS |
| TAACGAAGATGACACAACCG+AGG | 0.691038 | 1.4:+7225582 | MS.gene058452:CDS |
| GTGACTAGCAAAGAACATTG+TGG | 0.699673 | 1.4:+7225472 | MS.gene058452:CDS |
| GTATGGTAGTATGAATGTGA+AGG | 0.713387 | 1.4:-7225500 | None:intergenic |
| AATTGCTCACCGCAACAATG+TGG | 0.726029 | 1.4:-7226476 | None:intergenic |
| ATTCAACTGAAACAACAGTG+TGG | 0.734063 | 1.4:+7224926 | MS.gene058452:CDS |
| TACATGGCAAGATCTACCGG+CGG | 0.803486 | 1.4:+7222066 | MS.gene058452:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCATATATTAAGATT+TGG | - | chr1.4:7223569-7223588 | None:intergenic | 10.0% |
| !! | TTAAATTATATATCTTCTAT+TGG | + | chr1.4:7222652-7222671 | MS.gene058452:intron | 10.0% |
| !! | TTTATACAATAAAAAAACTT+AGG | + | chr1.4:7226589-7226608 | MS.gene058452:intron | 10.0% |
| !!! | AATAATTTGATAACAAAAAA+TGG | - | chr1.4:7223882-7223901 | None:intergenic | 10.0% |
| !! | TGAATTAAACTTATAACTAA+AGG | - | chr1.4:7225288-7225307 | None:intergenic | 15.0% |
| !! | TTACAAATTATACAGATAAA+GGG | + | chr1.4:7221831-7221850 | MS.gene058452:CDS | 15.0% |
| !!! | AATGAATTTTTCAATCTAAA+AGG | + | chr1.4:7222726-7222745 | MS.gene058452:intron | 15.0% |
| !!! | ATTTTTAAGTGTAAATTACT+TGG | - | chr1.4:7224406-7224425 | None:intergenic | 15.0% |
| !!! | TGTTATTTTGGTTTTTTTTA+AGG | + | chr1.4:7223375-7223394 | MS.gene058452:intron | 15.0% |
| !! | ACAAAACCATGATAATAATA+AGG | + | chr1.4:7225870-7225889 | MS.gene058452:CDS | 20.0% |
| !! | AGATAACAAGATTAATATCA+TGG | + | chr1.4:7226089-7226108 | MS.gene058452:CDS | 20.0% |
| !! | CTTACAAATTATACAGATAA+AGG | + | chr1.4:7221830-7221849 | MS.gene058452:CDS | 20.0% |
| !! | TATATCTAATAAGATTTCCT+TGG | + | chr1.4:7225411-7225430 | MS.gene058452:intron | 20.0% |
| !!! | TAATTTTCTCGAATTATTAG+CGG | + | chr1.4:7222512-7222531 | MS.gene058452:intron | 20.0% |
| !!! | TACTTTATTTTATCCAAACA+AGG | - | chr1.4:7223939-7223958 | None:intergenic | 20.0% |
| !!! | TCAATAGATGATTTTTATCA+TGG | - | chr1.4:7224085-7224104 | None:intergenic | 20.0% |
| !!! | TCAATTCTAAAACAAAAGAA+AGG | - | chr1.4:7225013-7225032 | None:intergenic | 20.0% |
| !!! | TCAGGTAAAAATTGTTATTT+TGG | + | chr1.4:7223363-7223382 | MS.gene058452:intron | 20.0% |
| !!! | TTAGTTAAGAGTTTGTTAAT+CGG | - | chr1.4:7225388-7225407 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGATTCATCATTT+TGG | + | chr1.4:7222678-7222697 | MS.gene058452:intron | 20.0% |
| ! | AAACAAGAGAATTGAAATTG+AGG | + | chr1.4:7222117-7222136 | MS.gene058452:CDS | 25.0% |
| ! | AAATGGAACAAATTCAATTG+AGG | + | chr1.4:7225744-7225763 | MS.gene058452:CDS | 25.0% |
| ! | AACAATTGGAGTAAACTATA+TGG | + | chr1.4:7223324-7223343 | MS.gene058452:CDS | 25.0% |
| ! | AATAAAACCATTCACATTAC+AGG | + | chr1.4:7223529-7223548 | MS.gene058452:CDS | 25.0% |
| ! | ACAATTGGAGTAAACTATAT+GGG | + | chr1.4:7223325-7223344 | MS.gene058452:CDS | 25.0% |
| ! | AGATTCTTACAAATTTAGTC+AGG | + | chr1.4:7224475-7224494 | MS.gene058452:CDS | 25.0% |
| ! | ATGTACCTTCTAAATAAAGT+AGG | - | chr1.4:7225135-7225154 | None:intergenic | 25.0% |
| ! | ATTGCAGAAAATGTTAACAT+TGG | + | chr1.4:7224308-7224327 | MS.gene058452:CDS | 25.0% |
| ! | CAACTCATGTTTAAATACTA+CGG | - | chr1.4:7222775-7222794 | None:intergenic | 25.0% |
| ! | CAATAAAAAAACTTAGGAAG+TGG | + | chr1.4:7226595-7226614 | MS.gene058452:intron | 25.0% |
| ! | CTAAAGGAAACTAAAGATTA+AGG | - | chr1.4:7225272-7225291 | None:intergenic | 25.0% |
| ! | TAAATTACTTGGCATTTATC+TGG | - | chr1.4:7224395-7224414 | None:intergenic | 25.0% |
| ! | TAATAAGATTTCCTTGGATT+TGG | + | chr1.4:7225417-7225436 | MS.gene058452:intron | 25.0% |
| ! | TATCTGGTAATAATCAAGTA+TGG | - | chr1.4:7224379-7224398 | None:intergenic | 25.0% |
| ! | TCAAAATAATGTCGTATGAA+TGG | - | chr1.4:7226197-7226216 | None:intergenic | 25.0% |
| ! | TCAAGTAACATCATTTCAAA+TGG | + | chr1.4:7225727-7225746 | MS.gene058452:CDS | 25.0% |
| ! | TCTTCAACAAGAAGAATATT+CGG | - | chr1.4:7226072-7226091 | None:intergenic | 25.0% |
| ! | TTCAAACAACAAAACTGATT+AGG | + | chr1.4:7226352-7226371 | MS.gene058452:CDS | 25.0% |
| ! | TTCAGTTTAAATACAAGTGT+CGG | - | chr1.4:7222487-7222506 | None:intergenic | 25.0% |
| ! | TTCTTTCATGTAAATATTGC+AGG | + | chr1.4:7224425-7224444 | MS.gene058452:intron | 25.0% |
| !! | AATGTTAACATTTTCTGCAA+TGG | - | chr1.4:7224309-7224328 | None:intergenic | 25.0% |
| !! | CTATACCTACTTTATTTAGA+AGG | + | chr1.4:7225127-7225146 | MS.gene058452:CDS | 25.0% |
| !! | GATTAGTTATCCTTATCAAT+CGG | - | chr1.4:7225344-7225363 | None:intergenic | 25.0% |
| !! | TAATTTTTCCAGGACATTAT+AGG | + | chr1.4:7223127-7223146 | MS.gene058452:intron | 25.0% |
| !! | TAGGAAGTGGTTTTTAATAT+TGG | + | chr1.4:7226608-7226627 | MS.gene058452:intron | 25.0% |
| !! | TTGAAATGATGTTACTTGAA+TGG | - | chr1.4:7225726-7225745 | None:intergenic | 25.0% |
| !! | TTGATAACAAAAAATGGTGA+AGG | - | chr1.4:7223876-7223895 | None:intergenic | 25.0% |
| !!! | AAAGTTATTTCCTTTTTTGC+AGG | - | chr1.4:7223235-7223254 | None:intergenic | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | + | chr1.4:7223198-7223217 | MS.gene058452:CDS | 25.0% |
| !!! | TTATCTGTTTTCTCTAGAAT+CGG | + | chr1.4:7224512-7224531 | MS.gene058452:intron | 25.0% |
| !!! | TTATGCGATTTTTTGTGATA+CGG | + | chr1.4:7226280-7226299 | MS.gene058452:intron | 25.0% |
| !!! | TTCATACGACATTATTTTGA+TGG | + | chr1.4:7226197-7226216 | MS.gene058452:CDS | 25.0% |
| AAGCACGAAAGTTTATGTAA+TGG | + | chr1.4:7225841-7225860 | MS.gene058452:CDS | 30.0% | |
| AATAAGTCGAAAACATCTCA+TGG | + | chr1.4:7223996-7224015 | MS.gene058452:intron | 30.0% | |
| AATAATATCGAGAAAATCGC+AGG | + | chr1.4:7223435-7223454 | MS.gene058452:intron | 30.0% | |
| AATTGGAAGCTACAAAATTC+AGG | + | chr1.4:7224241-7224260 | MS.gene058452:CDS | 30.0% | |
| ACTAGCAATATGTAAACAAC+TGG | + | chr1.4:7225203-7225222 | MS.gene058452:CDS | 30.0% | |
| ATGTATAGGAGCTATGAAAT+TGG | + | chr1.4:7224224-7224243 | MS.gene058452:intron | 30.0% | |
| ATTACCTCTTCTTGTAAACT+TGG | - | chr1.4:7222986-7223005 | None:intergenic | 30.0% | |
| CAATTCAACATAGAAAAACC+AGG | + | chr1.4:7221731-7221750 | MS.gene058452:CDS | 30.0% | |
| CAGAAAATGTTAACATTGGA+AGG | + | chr1.4:7224312-7224331 | MS.gene058452:CDS | 30.0% | |
| CATGCACCTTATTATTATCA+TGG | - | chr1.4:7225879-7225898 | None:intergenic | 30.0% | |
| CATTGTTAAACACATGATTC+TGG | - | chr1.4:7224846-7224865 | None:intergenic | 30.0% | |
| GAATGTTAAAACAGAAATCC+TGG | - | chr1.4:7222908-7222927 | None:intergenic | 30.0% | |
| GATTAAACCTGTAATGTGAA+TGG | - | chr1.4:7223539-7223558 | None:intergenic | 30.0% | |
| GGCTTATTTAATGCAACATT+GGG | + | chr1.4:7221865-7221884 | MS.gene058452:CDS | 30.0% | |
| TACCTCAATAGGTATATCAT+CGG | - | chr1.4:7224346-7224365 | None:intergenic | 30.0% | |
| TGATATACTTGATCTTTCCA+AGG | + | chr1.4:7223830-7223849 | MS.gene058452:CDS | 30.0% | |
| TGATTGTATTGAAGACATGA+TGG | + | chr1.4:7221652-7221671 | MS.gene058452:CDS | 30.0% | |
| TGGCTTATTTAATGCAACAT+TGG | + | chr1.4:7221864-7221883 | MS.gene058452:CDS | 30.0% | |
| TTAAACACATGATTCTGGAT+AGG | - | chr1.4:7224841-7224860 | None:intergenic | 30.0% | |
| TTACTTCTTCCAACATATCT+TGG | - | chr1.4:7221763-7221782 | None:intergenic | 30.0% | |
| TTATGAAGAAACAGGCAATT+GGG | + | chr1.4:7226377-7226396 | MS.gene058452:CDS | 30.0% | |
| TTGAAGAGTTATCTTCAATG+TGG | + | chr1.4:7221678-7221697 | MS.gene058452:CDS | 30.0% | |
| TTGACAATCTTAGCAAACAA+AGG | + | chr1.4:7221930-7221949 | MS.gene058452:CDS | 30.0% | |
| TTTACAGAAACCGATTGATA+AGG | + | chr1.4:7225331-7225350 | MS.gene058452:intron | 30.0% | |
| ! | AGTATGATACTGTTGTTTAC+TGG | + | chr1.4:7222143-7222162 | MS.gene058452:CDS | 30.0% |
| ! | ATTAGGTCTTATGAAGAAAC+AGG | + | chr1.4:7226369-7226388 | MS.gene058452:CDS | 30.0% |
| ! | CAAGACACTCTTTCAATTTT+AGG | - | chr1.4:7226793-7226812 | None:intergenic | 30.0% |
| ! | CAGAAATTTTATGCAGCTTT+TGG | - | chr1.4:7223067-7223086 | None:intergenic | 30.0% |
| ! | GAAGTGTTATATACCTCAAT+AGG | - | chr1.4:7224357-7224376 | None:intergenic | 30.0% |
| ! | GTTTTTCGTATCTATTAACC+AGG | + | chr1.4:7222887-7222906 | MS.gene058452:intron | 30.0% |
| ! | TACTTGCTCATAATTTTTCC+AGG | + | chr1.4:7223117-7223136 | MS.gene058452:intron | 30.0% |
| ! | TCATAGCTTGCAAAAAATCT+TGG | + | chr1.4:7222578-7222597 | MS.gene058452:intron | 30.0% |
| ! | TCGCATAATGTGTGAATTTT+AGG | - | chr1.4:7226268-7226287 | None:intergenic | 30.0% |
| ! | TTGCAAAAAATCTTGGTGTA+TGG | + | chr1.4:7222585-7222604 | MS.gene058452:intron | 30.0% |
| ! | TTGGAACAGGTTGAATTAAT+GGG | + | chr1.4:7225436-7225455 | MS.gene058452:intron | 30.0% |
| ! | TTTGGAACAGGTTGAATTAA+TGG | + | chr1.4:7225435-7225454 | MS.gene058452:intron | 30.0% |
| ! | TTTTCCAAGTTTACAAGAAG+AGG | + | chr1.4:7222979-7222998 | MS.gene058452:CDS | 30.0% |
| !! | AGATTTTGAAAAACAGTTGG+AGG | + | chr1.4:7222180-7222199 | MS.gene058452:CDS | 30.0% |
| !! | AGCTGATTTTCAAAGACTAA+TGG | + | chr1.4:7221805-7221824 | MS.gene058452:CDS | 30.0% |
| !! | AGTGTCTTGAAAAGTATCTA+AGG | + | chr1.4:7226804-7226823 | MS.gene058452:CDS | 30.0% |
| !! | GCAAGATTTTGAAAAACAGT+TGG | + | chr1.4:7222177-7222196 | MS.gene058452:CDS | 30.0% |
| !! | TAAAGAGAATAATCGATTCG+AGG | + | chr1.4:7221985-7222004 | MS.gene058452:CDS | 30.0% |
| !! | TATTTCAGCAAATGGATTGA+AGG | + | chr1.4:7224738-7224757 | MS.gene058452:CDS | 30.0% |
| !! | TTCAATTTTAGGAATGTCAC+TGG | - | chr1.4:7226782-7226801 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGACAGAACTATT+TGG | + | chr1.4:7223250-7223269 | MS.gene058452:CDS | 30.0% |
| AAACAACTGGTAAACTCTTC+CGG | + | chr1.4:7225216-7225235 | MS.gene058452:intron | 35.0% | |
| AACTTGTGTGAGATTCTATG+AGG | - | chr1.4:7225670-7225689 | None:intergenic | 35.0% | |
| AACTTTCGTGCTTAGTTTCT+AGG | - | chr1.4:7225834-7225853 | None:intergenic | 35.0% | |
| AATGAGAGCAAAACAAATGC+TGG | + | chr1.4:7223662-7223681 | MS.gene058452:CDS | 35.0% | |
| AATTGCAGTTCAGAAAGCAA+AGG | + | chr1.4:7223495-7223514 | MS.gene058452:CDS | 35.0% | |
| ACATTCTGATTATCTCTTGC+AGG | + | chr1.4:7222922-7222941 | MS.gene058452:intron | 35.0% | |
| ACTCACTGTAATATACCTGA+TGG | - | chr1.4:7222363-7222382 | None:intergenic | 35.0% | |
| AGAAAGAATGGCAAAGCTAA+GGG | + | chr1.4:7223468-7223487 | MS.gene058452:CDS | 35.0% | |
| AGAAGAAGAATCTCACCAAA+AGG | + | chr1.4:7224696-7224715 | MS.gene058452:CDS | 35.0% | |
| AGAATCTCACACAAGTTCAA+TGG | + | chr1.4:7225673-7225692 | MS.gene058452:CDS | 35.0% | |
| AGATAAAGGGTCATCTCAAT+TGG | + | chr1.4:7221844-7221863 | MS.gene058452:CDS | 35.0% | |
| ATCAGAACTACGATACTTAG+AGG | - | chr1.4:7224584-7224603 | None:intergenic | 35.0% | |
| ATGTAAATATTGCAGGTCAC+TGG | + | chr1.4:7224432-7224451 | MS.gene058452:intron | 35.0% | |
| ATTCAACTGAAACAACAGTG+TGG | + | chr1.4:7224926-7224945 | MS.gene058452:CDS | 35.0% | |
| CAAAATGCACCTGTTGTTAT+TGG | + | chr1.4:7222337-7222356 | MS.gene058452:CDS | 35.0% | |
| CAAACAACAACAGACAACTT+AGG | + | chr1.4:7226522-7226541 | MS.gene058452:intron | 35.0% | |
| CAAGCTATGAAACACGTATA+CGG | - | chr1.4:7222568-7222587 | None:intergenic | 35.0% | |
| CAATCTTAGCAAACAAAGGA+AGG | + | chr1.4:7221934-7221953 | MS.gene058452:CDS | 35.0% | |
| CACAATTACTAACACATACC+TGG | - | chr1.4:7224988-7225007 | None:intergenic | 35.0% | |
| CACATTCATACTACCATACA+AGG | + | chr1.4:7225504-7225523 | MS.gene058452:CDS | 35.0% | |
| CAGTCAACTATTTCAGCAAA+TGG | + | chr1.4:7224730-7224749 | MS.gene058452:CDS | 35.0% | |
| CATGTTATCTTCAGGAGATT+TGG | + | chr1.4:7223791-7223810 | MS.gene058452:CDS | 35.0% | |
| CATTACTTGCAAATGAAGCA+CGG | + | chr1.4:7222409-7222428 | MS.gene058452:intron | 35.0% | |
| CATTGTCTCCTCTATTACAA+GGG | - | chr1.4:7223646-7223665 | None:intergenic | 35.0% | |
| CCACTACACAACTTATGTAT+AGG | + | chr1.4:7224210-7224229 | MS.gene058452:intron | 35.0% | |
| CCTATACATAAGTTGTGTAG+TGG | - | chr1.4:7224213-7224232 | None:intergenic | 35.0% | |
| CTTATGAAGAAACAGGCAAT+TGG | + | chr1.4:7226376-7226395 | MS.gene058452:CDS | 35.0% | |
| GGAAGTTGAGCAAAGAAAAT+TGG | + | chr1.4:7221955-7221974 | MS.gene058452:CDS | 35.0% | |
| GGTGAGAAAAAGAGAAAGAA+TGG | + | chr1.4:7223456-7223475 | MS.gene058452:intron | 35.0% | |
| GTATGGTAGTATGAATGTGA+AGG | - | chr1.4:7225503-7225522 | None:intergenic | 35.0% | |
| GTCAAATGAAAATGCTTTGC+CGG | - | chr1.4:7225238-7225257 | None:intergenic | 35.0% | |
| GTTGTAATGTGACACAGAAA+AGG | + | chr1.4:7225104-7225123 | MS.gene058452:intron | 35.0% | |
| GTTTACATGCCAGTTATGAA+TGG | + | chr1.4:7226327-7226346 | MS.gene058452:CDS | 35.0% | |
| GTTTGAAGACCATTCATAAC+TGG | - | chr1.4:7226339-7226358 | None:intergenic | 35.0% | |
| GTTTGACACTTTCACTTTAC+AGG | + | chr1.4:7226302-7226321 | MS.gene058452:intron | 35.0% | |
| TCAGAACTACGATACTTAGA+GGG | - | chr1.4:7224583-7224602 | None:intergenic | 35.0% | |
| TCATCTGCATCAATATGAGA+TGG | - | chr1.4:7226691-7226710 | None:intergenic | 35.0% | |
| TCATTGTCTCCTCTATTACA+AGG | - | chr1.4:7223647-7223666 | None:intergenic | 35.0% | |
| TCGGAGAGAGGATATATTAA+AGG | + | chr1.4:7222210-7222229 | MS.gene058452:CDS | 35.0% | |
| TGATCACATCTCATACTTCT+GGG | - | chr1.4:7224784-7224803 | None:intergenic | 35.0% | |
| TGATGATCCAGATGATCTTT+CGG | + | chr1.4:7225549-7225568 | MS.gene058452:CDS | 35.0% | |
| TGGAGTAAACTATATGGGAA+TGG | + | chr1.4:7223330-7223349 | MS.gene058452:CDS | 35.0% | |
| TTCTTGATCCCTTGTAATAG+AGG | + | chr1.4:7223635-7223654 | MS.gene058452:intron | 35.0% | |
| TTGATCACATCTCATACTTC+TGG | - | chr1.4:7224785-7224804 | None:intergenic | 35.0% | |
| TTGGATGTCATGTTATCTTC+AGG | + | chr1.4:7223783-7223802 | MS.gene058452:CDS | 35.0% | |
| TTGGTGAGATTCTTCTTCTT+TGG | - | chr1.4:7224695-7224714 | None:intergenic | 35.0% | |
| TTTACACATCAAGGCAAAGT+TGG | + | chr1.4:7224634-7224653 | MS.gene058452:CDS | 35.0% | |
| TTTGAGTAAGAATCGTTGTC+CGG | - | chr1.4:7225703-7225722 | None:intergenic | 35.0% | |
| ! | AAAAATCTTGGTGTATGGCT+TGG | + | chr1.4:7222590-7222609 | MS.gene058452:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | + | chr1.4:7223205-7223224 | MS.gene058452:CDS | 35.0% |
| ! | AAGGAAGCACAAATAAAAGC+TGG | - | chr1.4:7224555-7224574 | None:intergenic | 35.0% |
| ! | ACACAAGTTCAATGGTTTTC+CGG | + | chr1.4:7225681-7225700 | MS.gene058452:CDS | 35.0% |
| ! | ACAGATGTCGAAATTTTCAC+CGG | + | chr1.4:7223154-7223173 | MS.gene058452:CDS | 35.0% |
| ! | ACTGTTTTCATAAGCTGTGT+TGG | + | chr1.4:7223961-7223980 | MS.gene058452:intron | 35.0% |
| ! | CATTTGCTGAAATAGTTGAC+TGG | - | chr1.4:7224732-7224751 | None:intergenic | 35.0% |
| ! | CTGTTGTTTACTGGAAACAA+CGG | + | chr1.4:7222152-7222171 | MS.gene058452:CDS | 35.0% |
| ! | CTTTGAAAATCAGCTATAGC+TGG | - | chr1.4:7221800-7221819 | None:intergenic | 35.0% |
| ! | TAAAGAGCAAAGACAGCTTT+TGG | + | chr1.4:7223764-7223783 | MS.gene058452:CDS | 35.0% |
| ! | TCGAGGAAGAGATTAGTTAT+GGG | + | chr1.4:7222002-7222021 | MS.gene058452:CDS | 35.0% |
| ! | TGGAACAGGTTGAATTAATG+GGG | + | chr1.4:7225437-7225456 | MS.gene058452:intron | 35.0% |
| ! | TTCGAGGAAGAGATTAGTTA+TGG | + | chr1.4:7222001-7222020 | MS.gene058452:CDS | 35.0% |
| !! | CTGTTTTTCCTATAATGTCC+TGG | - | chr1.4:7223138-7223157 | None:intergenic | 35.0% |
| !! | TTAAATACAAGTGTCGGTGT+CGG | - | chr1.4:7222481-7222500 | None:intergenic | 35.0% |
| !!! | CTGGAGATGTTTTAAGGATT+CGG | + | chr1.4:7224451-7224470 | MS.gene058452:CDS | 35.0% |
| !!! | TGTTTTCTCTAGAATCGGAT+TGG | + | chr1.4:7224517-7224536 | MS.gene058452:intron | 35.0% |
| AACAAACATGTCAGGGTCAA+GGG | + | chr1.4:7225986-7226005 | MS.gene058452:CDS | 40.0% | |
| AACATATCTTGGTCTCTTCC+TGG | - | chr1.4:7221752-7221771 | None:intergenic | 40.0% | |
| AAGTCAATGATGAAGCAGCT+AGG | + | chr1.4:7226117-7226136 | MS.gene058452:CDS | 40.0% | |
| ACACATGATTCTGGATAGGA+TGG | - | chr1.4:7224837-7224856 | None:intergenic | 40.0% | |
| ACATCAGTTCCAACATCTTC+TGG | - | chr1.4:7221704-7221723 | None:intergenic | 40.0% | |
| AGAACTACGATACTTAGAGG+GGG | - | chr1.4:7224581-7224600 | None:intergenic | 40.0% | |
| AGCATGGATGTCGTGAATAA+TGG | + | chr1.4:7226144-7226163 | MS.gene058452:CDS | 40.0% | |
| AGCCGATGATATACCTATTG+AGG | + | chr1.4:7224341-7224360 | MS.gene058452:CDS | 40.0% | |
| AGGAAGAGACCAAGATATGT+TGG | + | chr1.4:7221751-7221770 | MS.gene058452:CDS | 40.0% | |
| ATGAAACACGTATACGGACA+CGG | - | chr1.4:7222562-7222581 | None:intergenic | 40.0% | |
| ATGCTAACAACACCAGAAAG+TGG | - | chr1.4:7223714-7223733 | None:intergenic | 40.0% | |
| CAAGCTGTTGAAACCTTGTA+TGG | - | chr1.4:7225520-7225539 | None:intergenic | 40.0% | |
| CAATTCCAACCACGAACTTT+GGG | + | chr1.4:7225613-7225632 | MS.gene058452:CDS | 40.0% | |
| CAGAACTACGATACTTAGAG+GGG | - | chr1.4:7224582-7224601 | None:intergenic | 40.0% | |
| CTAGAGTTTGCACTACCATT+TGG | - | chr1.4:7225910-7225929 | None:intergenic | 40.0% | |
| CTATACATGGCAAGATCTAC+CGG | + | chr1.4:7222063-7222082 | MS.gene058452:CDS | 40.0% | |
| GAACCACAACAAACATGTCA+GGG | + | chr1.4:7225979-7225998 | MS.gene058452:CDS | 40.0% | |
| GAAGATGTTGGAACTGATGT+TGG | + | chr1.4:7221704-7221723 | MS.gene058452:CDS | 40.0% | |
| GAGAAAGAATGGCAAAGCTA+AGG | + | chr1.4:7223467-7223486 | MS.gene058452:CDS | 40.0% | |
| GCTGTCAAGTTTACACATCA+AGG | + | chr1.4:7224625-7224644 | MS.gene058452:CDS | 40.0% | |
| GGGAATGGAAATAACAGATC+AGG | + | chr1.4:7223345-7223364 | MS.gene058452:CDS | 40.0% | |
| GTGACTAGCAAAGAACATTG+TGG | + | chr1.4:7225472-7225491 | MS.gene058452:CDS | 40.0% | |
| GTGCATGATAGCTTACCAAA+TGG | + | chr1.4:7225892-7225911 | MS.gene058452:CDS | 40.0% | |
| TACAAAATTCAGGCCAAGAG+AGG | + | chr1.4:7224251-7224270 | MS.gene058452:CDS | 40.0% | |
| TCTCGAATTATTAGCGGTGT+CGG | + | chr1.4:7222518-7222537 | MS.gene058452:intron | 40.0% | |
| TCTTCTTCTTTGGCAAATGC+TGG | - | chr1.4:7224685-7224704 | None:intergenic | 40.0% | |
| TGAAAGACAATCATCACCTG+TGG | + | chr1.4:7222261-7222280 | MS.gene058452:CDS | 40.0% | |
| TGAACCACAACAAACATGTC+AGG | + | chr1.4:7225978-7225997 | MS.gene058452:CDS | 40.0% | |
| TGGACGATGCTTACTATACA+TGG | + | chr1.4:7222050-7222069 | MS.gene058452:CDS | 40.0% | |
| TGTAGAACCTGTGTTTAGCA+AGG | + | chr1.4:7223294-7223313 | MS.gene058452:CDS | 40.0% | |
| TGTATCCTTGCACACAATTG+CGG | - | chr1.4:7226569-7226588 | None:intergenic | 40.0% | |
| TGTGAAGACTACACCTTGTT+TGG | + | chr1.4:7223923-7223942 | MS.gene058452:intron | 40.0% | |
| TTCAACCTGTTCCAAATCCA+AGG | - | chr1.4:7225431-7225450 | None:intergenic | 40.0% | |
| TTCAATCTAAAAGGCCGACT+CGG | + | chr1.4:7222735-7222754 | MS.gene058452:intron | 40.0% | |
| TTGGAATTGGAAGAATCCCT+CGG | - | chr1.4:7225602-7225621 | None:intergenic | 40.0% | |
| TTTCTAACCTGACTCAACCT+TGG | - | chr1.4:7223850-7223869 | None:intergenic | 40.0% | |
| ! | AGGTCACTGGAGATGTTTTA+AGG | + | chr1.4:7224445-7224464 | MS.gene058452:intron | 40.0% |
| ! | ATTCGGCTTTAACGTCGATT+TGG | - | chr1.4:7226055-7226074 | None:intergenic | 40.0% |
| ! | CGAGGAAGAGATTAGTTATG+GGG | + | chr1.4:7222003-7222022 | MS.gene058452:CDS | 40.0% |
| ! | GAACAGGTTGAATTAATGGG+GGG | + | chr1.4:7225439-7225458 | MS.gene058452:intron | 40.0% |
| ! | GAGGAAGAGATTAGTTATGG+GGG | + | chr1.4:7222004-7222023 | MS.gene058452:CDS | 40.0% |
| ! | GATTTCCTTGGATTTGGAAC+AGG | + | chr1.4:7225423-7225442 | MS.gene058452:intron | 40.0% |
| ! | GGAACAGGTTGAATTAATGG+GGG | + | chr1.4:7225438-7225457 | MS.gene058452:intron | 40.0% |
| !! | AATGTGGATGCGCTTTTTAG+GGG | - | chr1.4:7226463-7226482 | None:intergenic | 40.0% |
| !! | ACAATGTGGATGCGCTTTTT+AGG | - | chr1.4:7226465-7226484 | None:intergenic | 40.0% |
| !! | ACTTTCTGGTGTTGTTAGCA+TGG | + | chr1.4:7223713-7223732 | MS.gene058452:CDS | 40.0% |
| !! | CAATGTGGATGCGCTTTTTA+GGG | - | chr1.4:7226464-7226483 | None:intergenic | 40.0% |
| !! | CTGGTTCTGGAACAACATAA+AGG | - | chr1.4:7224666-7224685 | None:intergenic | 40.0% |
| !!! | CTTTTGAAGCTCTTGTTGCA+AGG | + | chr1.4:7223011-7223030 | MS.gene058452:intron | 40.0% |
| AAAGCGCATCCACATTGTTG+CGG | + | chr1.4:7226467-7226486 | MS.gene058452:CDS | 45.0% | |
| AACAGTTGGAGGCGAGTATT+CGG | + | chr1.4:7222191-7222210 | MS.gene058452:CDS | 45.0% | |
| AACGAAGATGACACAACCGA+GGG | + | chr1.4:7225583-7225602 | MS.gene058452:CDS | 45.0% | |
| AAGACAATCATCACCTGTGG+AGG | + | chr1.4:7222264-7222283 | MS.gene058452:CDS | 45.0% | |
| AAGCTGTGTTGGAGAGCTTA+TGG | + | chr1.4:7223972-7223991 | MS.gene058452:intron | 45.0% | |
| AATTGCTCACCGCAACAATG+TGG | - | chr1.4:7226479-7226498 | None:intergenic | 45.0% | |
| ACATGCCTTACTACCTCTCT+TGG | - | chr1.4:7224267-7224286 | None:intergenic | 45.0% | |
| ACCTGATGGCCAATAACAAC+AGG | - | chr1.4:7222349-7222368 | None:intergenic | 45.0% | |
| AGAATGTTTCGCCAACGGTA+TGG | + | chr1.4:7226739-7226758 | MS.gene058452:CDS | 45.0% | |
| AGCAAGGCAGGTGAAACAAT+TGG | + | chr1.4:7223310-7223329 | MS.gene058452:CDS | 45.0% | |
| CAAACGTCCGGTTTCGATAT+TGG | + | chr1.4:7222030-7222049 | MS.gene058452:CDS | 45.0% | |
| CAACAAACATGTCAGGGTCA+AGG | + | chr1.4:7225985-7226004 | MS.gene058452:CDS | 45.0% | |
| CATCTCATACTTCTGGGTGA+TGG | - | chr1.4:7224778-7224797 | None:intergenic | 45.0% | |
| CCAAAGTTCGTGGTTGGAAT+TGG | - | chr1.4:7225615-7225634 | None:intergenic | 45.0% | |
| CCAATTCCAACCACGAACTT+TGG | + | chr1.4:7225612-7225631 | MS.gene058452:CDS | 45.0% | |
| GAAGCAGCTAGGATATAGCA+TGG | + | chr1.4:7226128-7226147 | MS.gene058452:CDS | 45.0% | |
| GACCATGCTCGAAAATATGG+AGG | + | chr1.4:7225168-7225187 | MS.gene058452:CDS | 45.0% | |
| GATCTTTCCAAGGTTGAGTC+AGG | + | chr1.4:7223840-7223859 | MS.gene058452:CDS | 45.0% | |
| GATGTGTACGACACTGGAAT+TGG | + | chr1.4:7224958-7224977 | MS.gene058452:CDS | 45.0% | |
| GCAGACCATGCTCGAAAATA+TGG | + | chr1.4:7225165-7225184 | MS.gene058452:CDS | 45.0% | |
| GCATCGTCCAATATCGAAAC+CGG | - | chr1.4:7222040-7222059 | None:intergenic | 45.0% | |
| GCTGAAGAATGTTTCGCCAA+CGG | + | chr1.4:7226734-7226753 | MS.gene058452:CDS | 45.0% | |
| TAACGAAGATGACACAACCG+AGG | + | chr1.4:7225582-7225601 | MS.gene058452:CDS | 45.0% | |
| TCAATGTGGCCAGAAGATGT+TGG | + | chr1.4:7221692-7221711 | MS.gene058452:CDS | 45.0% | |
| TCCACTTTACAACACCGAGT+CGG | - | chr1.4:7222752-7222771 | None:intergenic | 45.0% | |
| TCGACATCCGAAAGATCATC+TGG | - | chr1.4:7225559-7225578 | None:intergenic | 45.0% | |
| ! | AAATATGGAGGCACAGGTCT+AGG | + | chr1.4:7225180-7225199 | MS.gene058452:CDS | 45.0% |
| ! | ACCTGTTGTTATTGGCCATC+AGG | + | chr1.4:7222345-7222364 | MS.gene058452:CDS | 45.0% |
| ! | GAGATAAGATCGCCACTTTC+TGG | + | chr1.4:7223699-7223718 | MS.gene058452:CDS | 45.0% |
| ! | GCAACATTGGGAGTATAAGC+AGG | + | chr1.4:7221877-7221896 | MS.gene058452:CDS | 45.0% |
| ! | GGATGTCGTGAATAATGGAG+TGG | + | chr1.4:7226149-7226168 | MS.gene058452:CDS | 45.0% |
| ! | TCACTTCTAATGGATCCACC+AGG | + | chr1.4:7225644-7225663 | MS.gene058452:CDS | 45.0% |
| ! | TGACCCTGACATGTTTGTTG+TGG | - | chr1.4:7225985-7226004 | None:intergenic | 45.0% |
| !! | ATGTGGATGCGCTTTTTAGG+GGG | - | chr1.4:7226462-7226481 | None:intergenic | 45.0% |
| !! | GAAAGGAGTGCCTGCAAAAA+AGG | + | chr1.4:7223222-7223241 | MS.gene058452:CDS | 45.0% |
| !! | GGCTCGCTTTTCACTTCTAA+TGG | + | chr1.4:7225634-7225653 | MS.gene058452:CDS | 45.0% |
| !! | TCTTTGGCAAATGCTGGTTC+TGG | - | chr1.4:7224679-7224698 | None:intergenic | 45.0% |
| !! | TGCCTCCATATTTTCGAGCA+TGG | - | chr1.4:7225173-7225192 | None:intergenic | 45.0% |
| !!! | ACTGGTCTTCTGTGACCTTT+TGG | - | chr1.4:7224714-7224733 | None:intergenic | 45.0% |
| AAAAGCGAGCCCAAAGTTCG+TGG | - | chr1.4:7225625-7225644 | None:intergenic | 50.0% | |
| AACATGTCAGGGTCAAGGGA+AGG | + | chr1.4:7225990-7226009 | MS.gene058452:CDS | 50.0% | |
| AATGAAGCACGGACACTCCT+CGG | + | chr1.4:7222420-7222439 | MS.gene058452:intron | 50.0% | |
| AGATTCCTTCACACCTGCTC+CGG | - | chr1.4:7223176-7223195 | None:intergenic | 50.0% | |
| AGTCTCCGCAATTGTGTGCA+AGG | + | chr1.4:7226561-7226580 | MS.gene058452:intron | 50.0% | |
| ATCTGTGACAGTTCCTCCAC+AGG | - | chr1.4:7222280-7222299 | None:intergenic | 50.0% | |
| CACAAATGCGTCCATACCGT+TGG | - | chr1.4:7226753-7226772 | None:intergenic | 50.0% | |
| CCAAGTAGCTACTCTGCAGT+CGG | + | chr1.4:7222807-7222826 | MS.gene058452:intron | 50.0% | |
| CGACTGCAGAGTAGCTACTT+GGG | - | chr1.4:7222809-7222828 | None:intergenic | 50.0% | |
| CGATACTTAGAGGGGGTAGA+AGG | - | chr1.4:7224574-7224593 | None:intergenic | 50.0% | |
| CGTTGTGATGTGTACGACAC+TGG | + | chr1.4:7224952-7224971 | MS.gene058452:CDS | 50.0% | |
| GAACCTGTGTTTAGCAAGGC+AGG | + | chr1.4:7223298-7223317 | MS.gene058452:CDS | 50.0% | |
| GACACTGGAATTGGCATACC+AGG | + | chr1.4:7224967-7224986 | MS.gene058452:CDS | 50.0% | |
| GACTGCAGAGTAGCTACTTG+GGG | - | chr1.4:7222808-7222827 | None:intergenic | 50.0% | |
| GTCGGAGACGTAAGGACTAT+TGG | + | chr1.4:7222825-7222844 | MS.gene058452:intron | 50.0% | |
| GTGTGAGATTCTATGAGGCC+TGG | - | chr1.4:7225665-7225684 | None:intergenic | 50.0% | |
| TACATGGCAAGATCTACCGG+CGG | + | chr1.4:7222066-7222085 | MS.gene058452:CDS | 50.0% | |
| TCACCTGCCTTGCTAAACAC+AGG | - | chr1.4:7223304-7223323 | None:intergenic | 50.0% | |
| TCAGGCCAAGAGAGGTAGTA+AGG | + | chr1.4:7224259-7224278 | MS.gene058452:CDS | 50.0% | |
| TGAGATTCTATGAGGCCTGG+TGG | - | chr1.4:7225662-7225681 | None:intergenic | 50.0% | |
| TTATGGGGGAGACAAACGTC+CGG | + | chr1.4:7222018-7222037 | MS.gene058452:CDS | 50.0% | |
| ! | GCTCGAAAATATGGAGGCAC+AGG | + | chr1.4:7225174-7225193 | MS.gene058452:CDS | 50.0% |
| ! | GTCGAAATTTTCACCGGAGC+AGG | + | chr1.4:7223160-7223179 | MS.gene058452:CDS | 50.0% |
| !! | TCACTTTTCCTTATCGCCGC+CGG | - | chr1.4:7222085-7222104 | None:intergenic | 50.0% |
| AAGATCTACCGGCGGCGATA+AGG | + | chr1.4:7222074-7222093 | MS.gene058452:CDS | 55.0% | |
| ACGTATACGGACACGGACAC+CGG | - | chr1.4:7222555-7222574 | None:intergenic | 55.0% | |
| ACTCTGCAGTCGGAGACGTA+AGG | + | chr1.4:7222817-7222836 | MS.gene058452:intron | 55.0% | |
| ATAAGCAGGCGAACGCGGTT+CGG | + | chr1.4:7221891-7221910 | MS.gene058452:CDS | 55.0% | |
| CCGACTGCAGAGTAGCTACT+TGG | - | chr1.4:7222810-7222829 | None:intergenic | 55.0% | |
| GGAGTATAAGCAGGCGAACG+CGG | + | chr1.4:7221886-7221905 | MS.gene058452:CDS | 55.0% | |
| TGGGATGCTGCAAGAGAAGC+TGG | + | chr1.4:7226396-7226415 | MS.gene058452:CDS | 55.0% | |
| TGTCGGACACGACATGTGTC+CGG | - | chr1.4:7222464-7222483 | None:intergenic | 55.0% | |
| TTTCACCGGAGCAGGTGTGA+AGG | + | chr1.4:7223168-7223187 | MS.gene058452:CDS | 55.0% | |
| !! | ATGGCTCTGAACTGCGCGTA+TGG | - | chr1.4:7226178-7226197 | None:intergenic | 55.0% |
| !! | GCCGACTCGGTGTTGTAAAG+TGG | + | chr1.4:7222748-7222767 | MS.gene058452:intron | 55.0% |
| ACACGACATGTGTCCGGCAC+TGG | - | chr1.4:7222458-7222477 | None:intergenic | 60.0% | |
| ACTGGGACACGCCTAATCCG+AGG | - | chr1.4:7222440-7222459 | None:intergenic | 60.0% | |
| CACGACATGTGTCCGGCACT+GGG | - | chr1.4:7222457-7222476 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCAGTGC+CGG | + | chr1.4:7222442-7222461 | MS.gene058452:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr1.4:7222426-7222445 | MS.gene058452:intron | 60.0% | |
| GCGAGCCCAAAGTTCGTGGT+TGG | - | chr1.4:7225621-7225640 | None:intergenic | 60.0% | |
| GGAGGCGAGTATTCGGAGAG+AGG | + | chr1.4:7222198-7222217 | MS.gene058452:CDS | 60.0% | |
| !! | GCAATGGTGCTGCAGCTGTC+TGG | - | chr1.4:7224293-7224312 | None:intergenic | 60.0% |
| !! | GGTGTCGGCGTGTTAGTGTC+CGG | + | chr1.4:7222533-7222552 | MS.gene058452:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 7221632 | 7226829 | 7221632 | ID=MS.gene058452 |
| chr1.4 | mRNA | 7221632 | 7226829 | 7221632 | ID=MS.gene058452.t1;Parent=MS.gene058452 |
| chr1.4 | exon | 7221632 | 7222366 | 7221632 | ID=MS.gene058452.t1.exon1;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7221632 | 7222366 | 7221632 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7222944 | 7223000 | 7222944 | ID=MS.gene058452.t1.exon2;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7222944 | 7223000 | 7222944 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7223139 | 7223366 | 7223139 | ID=MS.gene058452.t1.exon3;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7223139 | 7223366 | 7223139 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7223457 | 7223550 | 7223457 | ID=MS.gene058452.t1.exon4;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7223457 | 7223550 | 7223457 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7223655 | 7223861 | 7223655 | ID=MS.gene058452.t1.exon5;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7223655 | 7223861 | 7223655 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7224232 | 7224362 | 7224232 | ID=MS.gene058452.t1.exon6;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7224232 | 7224362 | 7224232 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7224447 | 7224496 | 7224447 | ID=MS.gene058452.t1.exon7;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7224447 | 7224496 | 7224447 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7224621 | 7224988 | 7224621 | ID=MS.gene058452.t1.exon8;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7224621 | 7224988 | 7224621 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7225121 | 7225224 | 7225121 | ID=MS.gene058452.t1.exon9;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7225121 | 7225224 | 7225121 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7225445 | 7226218 | 7225445 | ID=MS.gene058452.t1.exon10;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7225445 | 7226218 | 7225445 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7226324 | 7226488 | 7226324 | ID=MS.gene058452.t1.exon11;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7226324 | 7226488 | 7226324 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| chr1.4 | exon | 7226707 | 7226829 | 7226707 | ID=MS.gene058452.t1.exon12;Parent=MS.gene058452.t1 |
| chr1.4 | CDS | 7226707 | 7226829 | 7226707 | ID=cds.MS.gene058452.t1;Parent=MS.gene058452.t1 |
| Gene Sequence |
| Protein sequence |
