Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53040.t1 | XP_003598073.1 | 97.8 | 360 | 8 | 0 | 1 | 360 | 1 | 360 | 5.20E-197 | 696.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53040.t1 | A1RYE4 | 34.6 | 263 | 147 | 5 | 106 | 360 | 58 | 303 | 5.4e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53040.t1 | G7J081 | 97.8 | 360 | 8 | 0 | 1 | 360 | 1 | 360 | 3.8e-197 | 696.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056069 | MS.gene53040 | -0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene058798 | MS.gene53040 | 0.938843 | 3.44E-99 | -1.69E-46 |
| MS.gene060165 | MS.gene53040 | 0.813608 | 2.35E-51 | -1.69E-46 |
| MS.gene060619 | MS.gene53040 | 0.800477 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012318 | MS.gene53040 | PPI |
| MS.gene073336 | MS.gene53040 | PPI |
| MS.gene96326 | MS.gene53040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53040.t1 | MTR_3g005970 | 97.778 | 360 | 8 | 0 | 1 | 360 | 1 | 360 | 0.0 | 732 |
| MS.gene53040.t1 | MTR_1g107480 | 31.020 | 245 | 151 | 3 | 117 | 359 | 118 | 346 | 1.80e-29 | 119 |
| MS.gene53040.t1 | MTR_4g005880 | 32.114 | 246 | 147 | 5 | 117 | 359 | 151 | 379 | 2.19e-29 | 119 |
| MS.gene53040.t1 | MTR_8g033410 | 26.567 | 335 | 198 | 11 | 45 | 360 | 1 | 306 | 3.66e-26 | 107 |
| MS.gene53040.t1 | MTR_8g033400 | 28.016 | 257 | 151 | 6 | 107 | 354 | 76 | 307 | 3.72e-25 | 104 |
| MS.gene53040.t1 | MTR_8g033390 | 27.692 | 260 | 161 | 6 | 107 | 360 | 65 | 303 | 5.95e-25 | 103 |
| MS.gene53040.t1 | MTR_4g012960 | 26.587 | 252 | 165 | 3 | 108 | 359 | 58 | 289 | 2.04e-24 | 102 |
| MS.gene53040.t1 | MTR_4g013090 | 28.462 | 260 | 153 | 6 | 108 | 359 | 58 | 292 | 1.51e-23 | 99.8 |
| MS.gene53040.t1 | MTR_4g013100 | 27.451 | 255 | 162 | 5 | 108 | 359 | 59 | 293 | 1.94e-23 | 99.4 |
| MS.gene53040.t1 | MTR_6g007170 | 31.746 | 252 | 138 | 9 | 112 | 351 | 116 | 345 | 1.04e-21 | 95.5 |
| MS.gene53040.t1 | MTR_2g101840 | 26.515 | 264 | 171 | 4 | 99 | 359 | 50 | 293 | 1.55e-20 | 91.3 |
| MS.gene53040.t1 | MTR_6g007175 | 29.181 | 281 | 143 | 12 | 86 | 351 | 56 | 295 | 8.56e-17 | 80.9 |
| MS.gene53040.t1 | MTR_7g075830 | 24.231 | 260 | 159 | 6 | 118 | 360 | 57 | 295 | 1.28e-15 | 77.0 |
| MS.gene53040.t1 | MTR_4g013135 | 28.627 | 255 | 159 | 5 | 108 | 359 | 58 | 292 | 5.20e-15 | 75.5 |
| MS.gene53040.t1 | MTR_1g112510 | 26.587 | 252 | 168 | 7 | 119 | 359 | 88 | 333 | 5.59e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53040.t1 | AT1G72190 | 62.570 | 358 | 124 | 3 | 5 | 360 | 2 | 351 | 1.25e-161 | 457 |
| MS.gene53040.t1 | AT1G17745 | 32.143 | 280 | 168 | 8 | 85 | 359 | 111 | 373 | 4.12e-31 | 124 |
| MS.gene53040.t1 | AT4G34200 | 31.707 | 246 | 148 | 5 | 117 | 359 | 124 | 352 | 1.79e-29 | 119 |
| MS.gene53040.t1 | AT1G17745 | 29.642 | 307 | 167 | 9 | 85 | 359 | 111 | 400 | 2.70e-28 | 116 |
| MS.gene53040.t1 | AT3G19480 | 31.933 | 238 | 142 | 5 | 117 | 351 | 109 | 329 | 5.07e-26 | 109 |
| MS.gene53040.t1 | AT2G45630 | 29.032 | 248 | 151 | 5 | 118 | 360 | 91 | 318 | 1.39e-25 | 105 |
| MS.gene53040.t1 | AT5G14780 | 33.473 | 239 | 125 | 9 | 125 | 351 | 101 | 317 | 8.04e-23 | 98.6 |
| MS.gene53040.t1 | AT5G14780 | 33.473 | 239 | 125 | 9 | 125 | 351 | 127 | 343 | 8.73e-23 | 98.6 |
| MS.gene53040.t1 | AT5G14780 | 32.773 | 238 | 128 | 8 | 125 | 351 | 113 | 329 | 9.64e-23 | 98.2 |
| MS.gene53040.t1 | AT1G12550 | 27.481 | 262 | 162 | 7 | 105 | 360 | 62 | 301 | 1.30e-22 | 97.4 |
| MS.gene53040.t1 | AT1G79870 | 28.627 | 255 | 159 | 7 | 108 | 359 | 58 | 292 | 4.53e-20 | 90.1 |
| MS.gene53040.t1 | AT1G79870 | 25.794 | 252 | 151 | 6 | 108 | 359 | 58 | 273 | 1.53e-15 | 76.6 |
| MS.gene53040.t1 | AT1G68010 | 27.347 | 245 | 163 | 6 | 125 | 359 | 94 | 333 | 2.34e-14 | 73.9 |
| MS.gene53040.t1 | AT1G68010 | 27.092 | 251 | 168 | 6 | 119 | 359 | 88 | 333 | 3.43e-14 | 73.6 |
| MS.gene53040.t1 | AT1G68010 | 26.984 | 252 | 168 | 7 | 119 | 359 | 88 | 334 | 1.36e-12 | 68.9 |
Find 73 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATCGGTGATACTTTATT+TGG | 0.071786 | 3.3:-1573799 | MS.gene53040:CDS |
| GATAATGTAGATATTCATTT+TGG | 0.088675 | 3.3:-1572814 | MS.gene53040:intron |
| CTTCATTTCTTCCATGAAAA+AGG | 0.182361 | 3.3:-1572255 | MS.gene53040:intron |
| TTTATTTCAGGGTGCCCTTC+TGG | 0.268864 | 3.3:-1571368 | MS.gene53040:intron |
| AAATTTCAATATCTGATCAT+TGG | 0.336562 | 3.3:+1571234 | None:intergenic |
| TCCAAGCTTCCTTTGCTGTA+TGG | 0.363828 | 3.3:+1573825 | None:intergenic |
| AAGACCCAACATTAGATATA+TGG | 0.364315 | 3.3:+1574634 | None:intergenic |
| CTATCGGTGATACTTTATTT+GGG | 0.376577 | 3.3:-1573798 | MS.gene53040:CDS |
| AATTTCAATATCTGATCATT+GGG | 0.380747 | 3.3:+1571235 | None:intergenic |
| AGAGAAGAGAAGTGAGTGTT+GGG | 0.398307 | 3.3:+1577955 | None:intergenic |
| CTCCTAAGTGTCCGGATTCA+AGG | 0.399021 | 3.3:+1571296 | None:intergenic |
| ATCATGACTCCTCATATTGC+AGG | 0.400259 | 3.3:-1571202 | MS.gene53040:CDS |
| TACTACACAAACATGATAGT+TGG | 0.402501 | 3.3:+1574920 | None:intergenic |
| ATCTGATCATTGGGATCAAA+TGG | 0.411289 | 3.3:+1571244 | None:intergenic |
| GCACGACGATTGAAACCATT+TGG | 0.411552 | 3.3:-1572765 | MS.gene53040:CDS |
| AGGATCCCCAGTGGTGCTAC+TGG | 0.419307 | 3.3:-1574683 | MS.gene53040:CDS |
| TAGAGATGTACCTTGATAGA+TGG | 0.426362 | 3.3:+1576770 | None:intergenic |
| TTCAGTTGCATGTGCTGAAA+TGG | 0.438602 | 3.3:-1574657 | MS.gene53040:CDS |
| TAGAGAAGAGAAGTGAGTGT+TGG | 0.439410 | 3.3:+1577954 | None:intergenic |
| CTTATAATGCAGTATGGTGT+TGG | 0.439984 | 3.3:-1574846 | MS.gene53040:CDS |
| AACCTTAGCCATGGATCTAT+AGG | 0.450234 | 3.3:+1571165 | None:intergenic |
| TATTGCTACAAAGCGGAGTT+GGG | 0.456275 | 3.3:-1572733 | MS.gene53040:CDS |
| ATGAAGCTTATAATGCAGTA+TGG | 0.460758 | 3.3:-1574852 | MS.gene53040:CDS |
| CCTTGGGAATTTCTTCCAAC+GGG | 0.461257 | 3.3:+1574949 | None:intergenic |
| TCCATACAGCAAAGGAAGCT+TGG | 0.462894 | 3.3:-1573826 | MS.gene53040:CDS |
| ATGATAGTTGGCAATAGCCT+TGG | 0.466311 | 3.3:+1574932 | None:intergenic |
| TCCTAGCCCTCCTAAGTGTC+CGG | 0.468903 | 3.3:+1571288 | None:intergenic |
| AAAATCTGATGGAGAGAAAT+GGG | 0.472016 | 3.3:-1576895 | MS.gene53040:CDS |
| TTATTGCTACAAAGCGGAGT+TGG | 0.473922 | 3.3:-1572734 | MS.gene53040:CDS |
| AATGGCCATATATCTAATGT+TGG | 0.489549 | 3.3:-1574639 | MS.gene53040:CDS |
| CTACAACAACTCAAGATTCG+AGG | 0.494217 | 3.3:-1577934 | MS.gene53040:intron |
| TGAATTTCCAGTAGCACCAC+TGG | 0.503475 | 3.3:+1574676 | None:intergenic |
| ATGGCCATATATCTAATGTT+GGG | 0.506294 | 3.3:-1574638 | MS.gene53040:CDS |
| TGATAGTTGGCAATAGCCTT+GGG | 0.519273 | 3.3:+1574933 | None:intergenic |
| CTTAAACTTAAACAGTGAAA+CGG | 0.520932 | 3.3:-1572496 | MS.gene53040:intron |
| GCCTTGGGAATTTCTTCCAA+CGG | 0.523993 | 3.3:+1574948 | None:intergenic |
| ATCGATGCTGCAACAAAGCA+TGG | 0.530276 | 3.3:-1574719 | MS.gene53040:CDS |
| AACCTTGAATCCGGACACTT+AGG | 0.536199 | 3.3:-1571298 | MS.gene53040:CDS |
| GCAGAATCATCCATCTATCA+AGG | 0.542084 | 3.3:-1576780 | MS.gene53040:intron |
| GGCTAGGAACCGATGTTGCA+TGG | 0.544266 | 3.3:-1571273 | MS.gene53040:CDS |
| AGGAACCGATGTTGCATGGA+CGG | 0.557674 | 3.3:-1571269 | MS.gene53040:CDS |
| TTATAATGCAGTATGGTGTT+GGG | 0.558492 | 3.3:-1574845 | MS.gene53040:CDS |
| ACAGCCTCATAGTCTAAAAG+AGG | 0.560341 | 3.3:+1571328 | None:intergenic |
| CTCCTATAGATCCATGGCTA+AGG | 0.568330 | 3.3:-1571167 | None:intergenic |
| CTTGAATCCGGACACTTAGG+AGG | 0.570448 | 3.3:-1571295 | MS.gene53040:CDS |
| CCAAATAAAGTATCACCGAT+AGG | 0.575385 | 3.3:+1573799 | None:intergenic |
| AATGCAGTATGGTGTTGGGC+TGG | 0.576747 | 3.3:-1574841 | MS.gene53040:CDS |
| CAGTATGGTGTTGGGCTGGA+AGG | 0.577929 | 3.3:-1574837 | MS.gene53040:intron |
| GAATTTCCAGTAGCACCACT+GGG | 0.581979 | 3.3:+1574677 | None:intergenic |
| TCCGGACACTTAGGAGGGCT+AGG | 0.583295 | 3.3:-1571289 | MS.gene53040:CDS |
| GTAGGTTGATGTTCTCCCGT+TGG | 0.587056 | 3.3:-1574964 | MS.gene53040:intron |
| CTTCTGGTTAATGTTGCTAG+AGG | 0.594373 | 3.3:-1571352 | MS.gene53040:CDS |
| CTCTAGCAACATTAACCAGA+AGG | 0.595259 | 3.3:+1571353 | None:intergenic |
| TGCAGATTTCCATACAGCAA+AGG | 0.595617 | 3.3:-1573834 | MS.gene53040:CDS |
| GAAGATACTATACTTGCTTG+CGG | 0.595687 | 3.3:+1574609 | None:intergenic |
| AGCCACACAAACCTTAGCCA+TGG | 0.596880 | 3.3:+1571156 | None:intergenic |
| TGATGATCTTGTTGATGTGA+AGG | 0.599066 | 3.3:-1572574 | MS.gene53040:CDS |
| AGGAAGCTTGGAGAGCCTAT+CGG | 0.606938 | 3.3:-1573814 | MS.gene53040:CDS |
| AGCATGGAATCAAAGTTGCT+AGG | 0.608422 | 3.3:-1574703 | MS.gene53040:CDS |
| AGAACACTCCTATAGATCCA+TGG | 0.614020 | 3.3:-1571173 | MS.gene53040:CDS |
| CCCGTTGGAAGAAATTCCCA+AGG | 0.614180 | 3.3:-1574949 | MS.gene53040:CDS |
| GTTGTATATAGATGAGAACA+TGG | 0.621208 | 3.3:+1576812 | None:intergenic |
| TCTGTAACGCCTGCAATATG+AGG | 0.621540 | 3.3:+1571193 | None:intergenic |
| GATGATCTTGTTGATGTGAA+GGG | 0.630775 | 3.3:-1572573 | MS.gene53040:CDS |
| TGGCTCCGTCCATGCAACAT+CGG | 0.631902 | 3.3:+1571264 | None:intergenic |
| AAAGTGTGTTGTACTTGTTG+AGG | 0.638382 | 3.3:-1578006 | MS.gene53040:CDS |
| AGATGAGAACATGGGAACTG+AGG | 0.641093 | 3.3:+1576821 | None:intergenic |
| TTGAATCCGGACACTTAGGA+GGG | 0.659810 | 3.3:-1571294 | MS.gene53040:CDS |
| TCTAGCAACATTAACCAGAA+GGG | 0.669159 | 3.3:+1571354 | None:intergenic |
| TAAAAGTTATTGCTACAAAG+CGG | 0.687855 | 3.3:-1572740 | MS.gene53040:CDS |
| TTGTATATAGATGAGAACAT+GGG | 0.718125 | 3.3:+1576813 | None:intergenic |
| AAAGTTGCTAGGATCCCCAG+TGG | 0.758524 | 3.3:-1574692 | MS.gene53040:CDS |
| AATTTCCAGTAGCACCACTG+GGG | 0.785993 | 3.3:+1574678 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAATAAGTAAATTTA+AGG | + | chr3.3:1576977-1576996 | None:intergenic | 10.0% |
| !! | AATGAAATAAGTAAATTTAA+GGG | + | chr3.3:1576976-1576995 | None:intergenic | 10.0% |
| !! | ATTTCAGTAAATATAAATAT+GGG | + | chr3.3:1576073-1576092 | None:intergenic | 10.0% |
| !! | TATTTCAGTAAATATAAATA+TGG | + | chr3.3:1576074-1576093 | None:intergenic | 10.0% |
| !!! | AAATATATATAGTTTACTTT+TGG | - | chr3.3:1575677-1575696 | MS.gene53040:intron | 10.0% |
| !!! | ATTTACTTATTTCATTTTTT+AGG | - | chr3.3:1576980-1576999 | MS.gene53040:intron | 10.0% |
| !!! | TAGAAATATAGATTTTATTT+CGG | + | chr3.3:1575564-1575583 | None:intergenic | 10.0% |
| !!! | TTTACTTATTTCATTTTTTA+GGG | - | chr3.3:1576981-1577000 | MS.gene53040:intron | 10.0% |
| !! | AAAACGAATAAATAAATGAT+TGG | + | chr3.3:1576725-1576744 | None:intergenic | 15.0% |
| !! | AATAGAAATAGAGAAAATAA+TGG | - | chr3.3:1577128-1577147 | MS.gene53040:intron | 15.0% |
| !! | AATATTTGTCAATAAAAATG+TGG | + | chr3.3:1574665-1574684 | None:intergenic | 15.0% |
| !! | ATAGATACCAATTTAAATTA+AGG | + | chr3.3:1573992-1574011 | None:intergenic | 15.0% |
| !! | ATATTTCGTTATATCTAAAT+TGG | - | chr3.3:1573233-1573252 | MS.gene53040:intron | 15.0% |
| !! | ATCAAATTTCTGTTATATTT+AGG | + | chr3.3:1572873-1572892 | None:intergenic | 15.0% |
| !! | ATGAAATAAGTAAATTTAAG+GGG | + | chr3.3:1576975-1576994 | None:intergenic | 15.0% |
| !! | ATTCTAAATTCAATATCATT+AGG | - | chr3.3:1571860-1571879 | MS.gene53040:intron | 15.0% |
| !! | ATTCTAAATTCAATGTAATT+AGG | - | chr3.3:1572198-1572217 | MS.gene53040:intron | 15.0% |
| !! | GAAAAATAATAAATAATCAG+AGG | + | chr3.3:1574430-1574449 | None:intergenic | 15.0% |
| !! | GAAAATATCAAAATGAAAAA+AGG | + | chr3.3:1572474-1572493 | None:intergenic | 15.0% |
| !! | TATATTGTCAAAATATGAAT+TGG | + | chr3.3:1573015-1573034 | None:intergenic | 15.0% |
| !! | TTATATTTACTGAAATAGAT+CGG | - | chr3.3:1576077-1576096 | MS.gene53040:intron | 15.0% |
| !! | TTATCTAACCTAAAATTAAT+TGG | + | chr3.3:1574180-1574199 | None:intergenic | 15.0% |
| !!! | AATTTGAAATGAAGAAAAAT+AGG | + | chr3.3:1573191-1573210 | None:intergenic | 15.0% |
| !!! | ATAATGTAGATATTCATTTT+GGG | - | chr3.3:1576371-1576390 | MS.gene53040:intron | 15.0% |
| !!! | ATATTGAATTTAGAATTAAC+TGG | + | chr3.3:1571856-1571875 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTTTTATCAGT+AGG | - | chr3.3:1577586-1577605 | MS.gene53040:intron | 15.0% |
| !!! | TATTGAATTTAGAATTAACT+GGG | + | chr3.3:1571855-1571874 | None:intergenic | 15.0% |
| !!! | TATTTATTATTTTTCCTCTT+AGG | - | chr3.3:1574435-1574454 | MS.gene53040:intron | 15.0% |
| !! | AAATTAAAATTAGTAGCCTA+AGG | - | chr3.3:1577377-1577396 | MS.gene53040:intron | 20.0% |
| !! | AAATTTCAATATCTGATCAT+TGG | + | chr3.3:1577953-1577972 | None:intergenic | 20.0% |
| !! | AACAAGATTAAAAATGCAAA+AGG | + | chr3.3:1572620-1572639 | None:intergenic | 20.0% |
| !! | AATAATGTATAACTGGAATT+TGG | - | chr3.3:1577543-1577562 | MS.gene53040:intron | 20.0% |
| !! | AATTTCAATATCTGATCATT+GGG | + | chr3.3:1577952-1577971 | None:intergenic | 20.0% |
| !! | ACATAGAAATAATGTATAAC+TGG | - | chr3.3:1577536-1577555 | MS.gene53040:intron | 20.0% |
| !! | AGTTAAAACAAAAGGAATTA+TGG | - | chr3.3:1572815-1572834 | MS.gene53040:intron | 20.0% |
| !! | ATAATCAAAGAATAGTTCAT+AGG | + | chr3.3:1577288-1577307 | None:intergenic | 20.0% |
| !! | ATTTAAATTGGTATCTATCA+TGG | - | chr3.3:1573994-1574013 | MS.gene53040:intron | 20.0% |
| !! | CCAATTTAAATTAAGGAAAT+AGG | + | chr3.3:1573985-1574004 | None:intergenic | 20.0% |
| !! | CCTATTTCCTTAATTTAAAT+TGG | - | chr3.3:1573982-1574001 | MS.gene53040:intron | 20.0% |
| !! | CTAAGCTATAATTTCAATAT+TGG | - | chr3.3:1572254-1572273 | MS.gene53040:intron | 20.0% |
| !! | GTTAAAACAAAAGGAATTAT+GGG | - | chr3.3:1572816-1572835 | MS.gene53040:intron | 20.0% |
| !! | TAATCAAAGAATAGTTCATA+GGG | + | chr3.3:1577287-1577306 | None:intergenic | 20.0% |
| !! | TAGATTGAATTAAGTTTCTT+CGG | - | chr3.3:1573093-1573112 | MS.gene53040:intron | 20.0% |
| !! | TATAAAACAATAGTGATGAA+TGG | - | chr3.3:1572583-1572602 | MS.gene53040:CDS | 20.0% |
| !! | TTCAGAGAAACAATTAAAAT+TGG | - | chr3.3:1573744-1573763 | MS.gene53040:intron | 20.0% |
| !! | TTTAAATTGGTATCTATCAT+GGG | - | chr3.3:1573995-1574014 | MS.gene53040:intron | 20.0% |
| !!! | AACTACTAGAAACTTTTTAA+AGG | - | chr3.3:1574824-1574843 | MS.gene53040:intron | 20.0% |
| !!! | ACTACTAGAAACTTTTTAAA+GGG | - | chr3.3:1574825-1574844 | MS.gene53040:intron | 20.0% |
| !!! | ATTTTAATTTCGTAGAGAAT+AGG | + | chr3.3:1577367-1577386 | None:intergenic | 20.0% |
| !!! | CATTTCTTGTTGTTTTATAT+AGG | - | chr3.3:1577694-1577713 | MS.gene53040:intron | 20.0% |
| !!! | CTTCTTATTTCATAATTCTA+CGG | + | chr3.3:1572966-1572985 | None:intergenic | 20.0% |
| !!! | GATAATGTAGATATTCATTT+TGG | - | chr3.3:1576370-1576389 | MS.gene53040:intron | 20.0% |
| !!! | GTTTCATTCCAATTAATTTT+AGG | - | chr3.3:1574169-1574188 | MS.gene53040:intron | 20.0% |
| !!! | GTTTTAACTTTTAAATGTCA+TGG | - | chr3.3:1572515-1572534 | MS.gene53040:CDS | 20.0% |
| !!! | TAATGTAGATATTCATTTTG+GGG | - | chr3.3:1576372-1576391 | MS.gene53040:intron | 20.0% |
| !!! | TACAAGATATTTTGAGATTA+AGG | - | chr3.3:1571491-1571510 | MS.gene53040:intron | 20.0% |
| !!! | TCTATATTTCTACCTTAAAA+AGG | - | chr3.3:1575572-1575591 | MS.gene53040:intron | 20.0% |
| !!! | TTTGCATTTTTAATCTTGTT+GGG | - | chr3.3:1572620-1572639 | MS.gene53040:intron | 20.0% |
| !!! | TTTTCATTACAATTTGCTTT+TGG | - | chr3.3:1576803-1576822 | MS.gene53040:CDS | 20.0% |
| !!! | TTTTGCATTTTTAATCTTGT+TGG | - | chr3.3:1572619-1572638 | MS.gene53040:intron | 20.0% |
| ! | AAAAAATCTAAAAGCCTCAT+CGG | + | chr3.3:1571379-1571398 | None:intergenic | 25.0% |
| ! | ACTTTACTATAAGTCCAAAT+AGG | + | chr3.3:1572930-1572949 | None:intergenic | 25.0% |
| ! | AGTAGCAAGTACATATAAAA+TGG | + | chr3.3:1574040-1574059 | None:intergenic | 25.0% |
| ! | ATCTCTAATAACAAGCAATT+AGG | - | chr3.3:1575947-1575966 | MS.gene53040:intron | 25.0% |
| ! | ATCTTTAACGATTGTTTCAA+CGG | + | chr3.3:1576247-1576266 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAACTAAAACAG+TGG | - | chr3.3:1576328-1576347 | MS.gene53040:intron | 25.0% |
| ! | CGTAGAATTATGAAATAAGA+AGG | - | chr3.3:1572964-1572983 | MS.gene53040:intron | 25.0% |
| ! | CTTAAACTTAAACAGTGAAA+CGG | - | chr3.3:1576688-1576707 | MS.gene53040:intron | 25.0% |
| ! | GAAATAACCTAAAAACTAAG+AGG | + | chr3.3:1572847-1572866 | None:intergenic | 25.0% |
| ! | GCAATCTCATTTAGAAATAA+TGG | + | chr3.3:1574621-1574640 | None:intergenic | 25.0% |
| ! | TAAAAGTTATTGCTACAAAG+CGG | - | chr3.3:1576444-1576463 | MS.gene53040:intron | 25.0% |
| ! | TAAATTTAAGGGGTTAATCT+TGG | + | chr3.3:1576965-1576984 | None:intergenic | 25.0% |
| ! | TAATGTACAATTAAACTGCT+TGG | - | chr3.3:1573496-1573515 | MS.gene53040:intron | 25.0% |
| ! | TCATTAAGTAAACATAACCA+CGG | + | chr3.3:1577234-1577253 | None:intergenic | 25.0% |
| ! | TCTCTAATAACAAGCAATTA+GGG | - | chr3.3:1575948-1575967 | MS.gene53040:intron | 25.0% |
| ! | TCTGTAAGAAACTATGTTAA+GGG | - | chr3.3:1573319-1573338 | MS.gene53040:intron | 25.0% |
| ! | TGACAAATATTTGAAAGCAA+GGG | - | chr3.3:1574674-1574693 | MS.gene53040:CDS | 25.0% |
| ! | TGATTAATGAGCTTCAATTT+AGG | - | chr3.3:1572687-1572706 | MS.gene53040:intron | 25.0% |
| ! | TTAAATTGGTATCTATCATG+GGG | - | chr3.3:1573996-1574015 | MS.gene53040:intron | 25.0% |
| ! | TTCTGTAAGAAACTATGTTA+AGG | - | chr3.3:1573318-1573337 | MS.gene53040:intron | 25.0% |
| ! | TTGACAAATATTTGAAAGCA+AGG | - | chr3.3:1574673-1574692 | MS.gene53040:CDS | 25.0% |
| ! | TTGTATATAGATGAGAACAT+GGG | + | chr3.3:1572374-1572393 | None:intergenic | 25.0% |
| ! | TTTCAGTAGTAGTTATCTTT+AGG | - | chr3.3:1573881-1573900 | MS.gene53040:intron | 25.0% |
| !! | AAATTGGTGTTCTATCATTT+GGG | - | chr3.3:1573249-1573268 | MS.gene53040:intron | 25.0% |
| !! | ACAATTAAAATTGGTGATCT+TGG | - | chr3.3:1573753-1573772 | MS.gene53040:intron | 25.0% |
| !! | ACATTGAATTTAGAATCTAG+TGG | + | chr3.3:1572194-1572213 | None:intergenic | 25.0% |
| !! | ATAGACTTTTGATCAAGATA+AGG | - | chr3.3:1577493-1577512 | MS.gene53040:intron | 25.0% |
| !! | CAATTAAAATTGGTGATCTT+GGG | - | chr3.3:1573754-1573773 | MS.gene53040:intron | 25.0% |
| !! | CATTGAATTTAGAATCTAGT+GGG | + | chr3.3:1572193-1572212 | None:intergenic | 25.0% |
| !! | GTTGCATACATTGATTAAAA+TGG | - | chr3.3:1575522-1575541 | MS.gene53040:intron | 25.0% |
| !! | TAAATTGGTGTTCTATCATT+TGG | - | chr3.3:1573248-1573267 | MS.gene53040:intron | 25.0% |
| !! | TAGACTTTTGATCAAGATAA+GGG | - | chr3.3:1577494-1577513 | MS.gene53040:intron | 25.0% |
| !! | TGTTTTATATAGGCTAGATT+GGG | - | chr3.3:1577704-1577723 | MS.gene53040:intron | 25.0% |
| !! | TTACGAATTCCTTTATTTCA+GGG | - | chr3.3:1577805-1577824 | MS.gene53040:intron | 25.0% |
| !! | TTCAATCAATTTTCACGAAA+CGG | + | chr3.3:1575709-1575728 | None:intergenic | 25.0% |
| !! | TTTTCACAAGTTATTCCAAA+CGG | - | chr3.3:1572038-1572057 | MS.gene53040:intron | 25.0% |
| !! | TTTTCGTTGAAACAAAGATT+TGG | + | chr3.3:1571208-1571227 | None:intergenic | 25.0% |
| !!! | ATCCAGGCAATAATTTTTTT+AGG | - | chr3.3:1575614-1575633 | MS.gene53040:intron | 25.0% |
| !!! | CTACTAGAAACTTTTTAAAG+GGG | - | chr3.3:1574826-1574845 | MS.gene53040:intron | 25.0% |
| !!! | GTCTAAAAGTTTATTTTGCT+TGG | - | chr3.3:1577770-1577789 | MS.gene53040:intron | 25.0% |
| !!! | TAATTTTTTTAGGTGTCTGA+TGG | - | chr3.3:1575624-1575643 | MS.gene53040:intron | 25.0% |
| !!! | TTCCTTTTGTTTTAACTCTT+CGG | + | chr3.3:1572812-1572831 | None:intergenic | 25.0% |
| !!! | TTGTTTTATATAGGCTAGAT+TGG | - | chr3.3:1577703-1577722 | MS.gene53040:intron | 25.0% |
| AAAAATCTGATGGAGAGAAA+TGG | - | chr3.3:1572288-1572307 | MS.gene53040:intron | 30.0% | |
| AAAATCTGATGGAGAGAAAT+GGG | - | chr3.3:1572289-1572308 | MS.gene53040:intron | 30.0% | |
| AAAATTAAAGCAATGCTCAG+AGG | + | chr3.3:1575884-1575903 | None:intergenic | 30.0% | |
| AACATTGTTTCCTATGTTGT+TGG | + | chr3.3:1573863-1573882 | None:intergenic | 30.0% | |
| AACCGAAGAGTTAAAACAAA+AGG | - | chr3.3:1572807-1572826 | MS.gene53040:CDS | 30.0% | |
| AAGACCCAACATTAGATATA+TGG | + | chr3.3:1574553-1574572 | None:intergenic | 30.0% | |
| AATAAGCTGTTTACCAAAAC+AGG | + | chr3.3:1571518-1571537 | None:intergenic | 30.0% | |
| AATGGCCATATATCTAATGT+TGG | - | chr3.3:1574545-1574564 | MS.gene53040:intron | 30.0% | |
| ACAAATATTTGAAAGCAAGG+GGG | - | chr3.3:1574676-1574695 | MS.gene53040:CDS | 30.0% | |
| ATAAGCTGTTTACCAAAACA+GGG | + | chr3.3:1571517-1571536 | None:intergenic | 30.0% | |
| ATCAAGGTACATCTCTATTA+GGG | - | chr3.3:1572420-1572439 | MS.gene53040:intron | 30.0% | |
| ATGAAGCTTATAATGCAGTA+TGG | - | chr3.3:1574332-1574351 | MS.gene53040:intron | 30.0% | |
| ATGGCCATATATCTAATGTT+GGG | - | chr3.3:1574546-1574565 | MS.gene53040:intron | 30.0% | |
| ATTGAAGCTCATTAATCACT+CGG | + | chr3.3:1572685-1572704 | None:intergenic | 30.0% | |
| ATTTCATAATTCTACGGTGT+GGG | + | chr3.3:1572960-1572979 | None:intergenic | 30.0% | |
| CAAATTGAATAGTACAGTCA+CGG | + | chr3.3:1573059-1573078 | None:intergenic | 30.0% | |
| CAATTTAGGCTGAATCAATT+CGG | - | chr3.3:1572701-1572720 | MS.gene53040:CDS | 30.0% | |
| CACCTAAAAAAATTATTGCC+TGG | + | chr3.3:1575619-1575638 | None:intergenic | 30.0% | |
| CTTCATTTCTTCCATGAAAA+AGG | - | chr3.3:1576929-1576948 | MS.gene53040:intron | 30.0% | |
| GACAAATATTTGAAAGCAAG+GGG | - | chr3.3:1574675-1574694 | MS.gene53040:CDS | 30.0% | |
| GACATGTTAGATAATGTTAG+AGG | + | chr3.3:1575026-1575045 | None:intergenic | 30.0% | |
| GAGTCAAACAAAACATTTGA+AGG | - | chr3.3:1576028-1576047 | MS.gene53040:intron | 30.0% | |
| GTTGTATATAGATGAGAACA+TGG | + | chr3.3:1572375-1572394 | None:intergenic | 30.0% | |
| TAAGCTCATAATGTATGTAC+AGG | - | chr3.3:1577008-1577027 | MS.gene53040:intron | 30.0% | |
| TAATGTATGTACAGGATGAT+AGG | - | chr3.3:1577016-1577035 | MS.gene53040:intron | 30.0% | |
| TACTACACAAACATGATAGT+TGG | + | chr3.3:1574267-1574286 | None:intergenic | 30.0% | |
| TATCAAGGTACATCTCTATT+AGG | - | chr3.3:1572419-1572438 | MS.gene53040:intron | 30.0% | |
| TATTTCATAATTCTACGGTG+TGG | + | chr3.3:1572961-1572980 | None:intergenic | 30.0% | |
| TCTCAAACTATCTTGTGATT+AGG | + | chr3.3:1571932-1571951 | None:intergenic | 30.0% | |
| TCTTAGTTACTGAATCAACT+AGG | + | chr3.3:1576162-1576181 | None:intergenic | 30.0% | |
| TGGTTACCAGAAAATTGTAT+TGG | + | chr3.3:1574974-1574993 | None:intergenic | 30.0% | |
| TGTATGAGTGCTTAAAACTA+CGG | + | chr3.3:1577628-1577647 | None:intergenic | 30.0% | |
| TTAAAGGAAGGGAATTTAAG+TGG | - | chr3.3:1573286-1573305 | MS.gene53040:intron | 30.0% | |
| TTATAATGCAGTATGGTGTT+GGG | - | chr3.3:1574339-1574358 | MS.gene53040:intron | 30.0% | |
| TTTAACTGAAGAATGAGTTG+TGG | - | chr3.3:1577164-1577183 | MS.gene53040:intron | 30.0% | |
| TTTGTTCCTAAAACACAGAA+TGG | + | chr3.3:1577109-1577128 | None:intergenic | 30.0% | |
| ! | AAATTTAACGTCTGGTTTGA+AGG | - | chr3.3:1573628-1573647 | MS.gene53040:intron | 30.0% |
| ! | ACAGATTGATGGTTTCTTAT+TGG | - | chr3.3:1571792-1571811 | MS.gene53040:intron | 30.0% |
| ! | CACAAGATAGTTTGAGATTA+GGG | - | chr3.3:1571935-1571954 | MS.gene53040:intron | 30.0% |
| ! | CGATACAATTATGGTTAGTT+GGG | - | chr3.3:1575992-1576011 | MS.gene53040:intron | 30.0% |
| ! | CTATCGGTGATACTTTATTT+GGG | - | chr3.3:1575386-1575405 | MS.gene53040:intron | 30.0% |
| ! | GCAATAACTTTTACACCAAA+TGG | + | chr3.3:1576437-1576456 | None:intergenic | 30.0% |
| ! | GTTACGAATTCCTTTATTTC+AGG | - | chr3.3:1577804-1577823 | MS.gene53040:intron | 30.0% |
| ! | GTTGATTCAGTAACTAAGAT+CGG | - | chr3.3:1576163-1576182 | MS.gene53040:intron | 30.0% |
| ! | GTTTTATATAGGCTAGATTG+GGG | - | chr3.3:1577705-1577724 | MS.gene53040:intron | 30.0% |
| ! | TCAATCAATTTTCACGAAAC+GGG | + | chr3.3:1575708-1575727 | None:intergenic | 30.0% |
| ! | TCACAAGATAGTTTGAGATT+AGG | - | chr3.3:1571934-1571953 | MS.gene53040:intron | 30.0% |
| ! | TTTTATATAGGCTAGATTGG+GGG | - | chr3.3:1577706-1577725 | MS.gene53040:intron | 30.0% |
| !! | ACATAGTTTGTTACGTTAAG+TGG | - | chr3.3:1572901-1572920 | MS.gene53040:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr3.3:1571970-1571989 | MS.gene53040:intron | 30.0% |
| !! | TATCTTTAGGACGTAATAAG+TGG | - | chr3.3:1573894-1573913 | MS.gene53040:intron | 30.0% |
| !! | TTAACATGTAACTTGTTCCT+AGG | - | chr3.3:1575853-1575872 | MS.gene53040:intron | 30.0% |
| !!! | TAGATATTCATTTTGGGGTT+CGG | - | chr3.3:1576377-1576396 | MS.gene53040:intron | 30.0% |
| !!! | TTCACTCTGTTTTGTTTGAA+TGG | - | chr3.3:1571341-1571360 | MS.gene53040:CDS | 30.0% |
| AAAAGCAATGGCATATGCTT+TGG | - | chr3.3:1573688-1573707 | MS.gene53040:intron | 35.0% | |
| AAAATCTGCATGACAAAACC+AGG | - | chr3.3:1574864-1574883 | MS.gene53040:CDS | 35.0% | |
| AAAGCAATGGCATATGCTTT+GGG | - | chr3.3:1573689-1573708 | MS.gene53040:intron | 35.0% | |
| AAATGAAGAGAGGGTAATAG+TGG | - | chr3.3:1573792-1573811 | MS.gene53040:CDS | 35.0% | |
| AACTTCCTGGATTTAAAGGA+AGG | - | chr3.3:1573274-1573293 | MS.gene53040:intron | 35.0% | |
| AAGCTGTCTATTGCATTTGT+AGG | - | chr3.3:1574202-1574221 | MS.gene53040:intron | 35.0% | |
| AAGTAACAGAAGTAGAAGCT+TGG | + | chr3.3:1576758-1576777 | None:intergenic | 35.0% | |
| AAGTGTAATACGAAAGTGGT+GGG | + | chr3.3:1574142-1574161 | None:intergenic | 35.0% | |
| AATATGAATTGGATTGCCTC+TGG | + | chr3.3:1573004-1573023 | None:intergenic | 35.0% | |
| AATTCCCTTCCTTTAAATCC+AGG | + | chr3.3:1573282-1573301 | None:intergenic | 35.0% | |
| AATTGCTTTGGCATAAGCTT+GGG | - | chr3.3:1575072-1575091 | MS.gene53040:intron | 35.0% | |
| ACACATTCTTATACATCACC+AGG | + | chr3.3:1574727-1574746 | None:intergenic | 35.0% | |
| ACTTCCTGGATTTAAAGGAA+GGG | - | chr3.3:1573275-1573294 | MS.gene53040:intron | 35.0% | |
| AGCTTATGCCAAAGCAATTA+TGG | + | chr3.3:1575071-1575090 | None:intergenic | 35.0% | |
| ATAAACTAAGCCTAGTATGC+TGG | - | chr3.3:1576839-1576858 | MS.gene53040:CDS | 35.0% | |
| ATAAGTTGTATGAGACCGTT+TGG | + | chr3.3:1572056-1572075 | None:intergenic | 35.0% | |
| ATCTAACATGTCCTCATGTT+TGG | - | chr3.3:1575034-1575053 | MS.gene53040:intron | 35.0% | |
| ATCTGATCATTGGGATCAAA+TGG | + | chr3.3:1577943-1577962 | None:intergenic | 35.0% | |
| ATGATAAAAATCTGTCCTCC+TGG | - | chr3.3:1577188-1577207 | MS.gene53040:intron | 35.0% | |
| CAAACTATCTTGTGATTAGG+TGG | + | chr3.3:1571929-1571948 | None:intergenic | 35.0% | |
| CACAGAAGTAAATGAAGAGA+GGG | - | chr3.3:1573783-1573802 | MS.gene53040:intron | 35.0% | |
| CCAATAAGAAACCATCAATC+TGG | + | chr3.3:1571795-1571814 | None:intergenic | 35.0% | |
| CCTATCGGTGATACTTTATT+TGG | - | chr3.3:1575385-1575404 | MS.gene53040:intron | 35.0% | |
| CGTGACTGTACTATTCAATT+TGG | - | chr3.3:1573057-1573076 | MS.gene53040:intron | 35.0% | |
| CGTTAAATTTCTTGCACAAC+AGG | + | chr3.3:1573618-1573637 | None:intergenic | 35.0% | |
| CTTATAATGCAGTATGGTGT+TGG | - | chr3.3:1574338-1574357 | MS.gene53040:intron | 35.0% | |
| CTTGGTCAAAGATAAACAGA+CGG | - | chr3.3:1573461-1573480 | MS.gene53040:intron | 35.0% | |
| GAAGATACTATACTTGCTTG+CGG | + | chr3.3:1574578-1574597 | None:intergenic | 35.0% | |
| GAATACCCAAATTTGATTCC+TGG | - | chr3.3:1572723-1572742 | MS.gene53040:CDS | 35.0% | |
| GATGATCTTGTTGATGTGAA+GGG | - | chr3.3:1576611-1576630 | MS.gene53040:intron | 35.0% | |
| GCAGAATACAATATGCTCAT+TGG | + | chr3.3:1571466-1571485 | None:intergenic | 35.0% | |
| GCGATACAATTATGGTTAGT+TGG | - | chr3.3:1575991-1576010 | MS.gene53040:intron | 35.0% | |
| GGTTAACTTCCTGGATTTAA+AGG | - | chr3.3:1573270-1573289 | MS.gene53040:intron | 35.0% | |
| GTATGAGTGCTTAAAACTAC+GGG | + | chr3.3:1577627-1577646 | None:intergenic | 35.0% | |
| GTGAAGATGTAAAAACTGCT+TGG | - | chr3.3:1573443-1573462 | MS.gene53040:intron | 35.0% | |
| GTGGAATACAAGATACTCAT+TGG | + | chr3.3:1571910-1571929 | None:intergenic | 35.0% | |
| GTGTCTCTGTCTTTATTCTT+TGG | - | chr3.3:1577043-1577062 | MS.gene53040:intron | 35.0% | |
| TAATTGCTTTGGCATAAGCT+TGG | - | chr3.3:1575071-1575090 | MS.gene53040:intron | 35.0% | |
| TAGAGATGTACCTTGATAGA+TGG | + | chr3.3:1572417-1572436 | None:intergenic | 35.0% | |
| TCGGTTCATGATACGTTAAA+TGG | + | chr3.3:1573660-1573679 | None:intergenic | 35.0% | |
| TCTAACATGTCCTCATGTTT+GGG | - | chr3.3:1575035-1575054 | MS.gene53040:intron | 35.0% | |
| TCTAGCAACATTAACCAGAA+GGG | + | chr3.3:1577833-1577852 | None:intergenic | 35.0% | |
| TCTGTCATAAAGCAGTTCAA+AGG | + | chr3.3:1573125-1573144 | None:intergenic | 35.0% | |
| TGAGAAGAAAATACTTAGCC+TGG | - | chr3.3:1574706-1574725 | MS.gene53040:CDS | 35.0% | |
| TGATAAAAATCTGTCCTCCT+GGG | - | chr3.3:1577189-1577208 | MS.gene53040:intron | 35.0% | |
| TGATGATCTTGTTGATGTGA+AGG | - | chr3.3:1576610-1576629 | MS.gene53040:intron | 35.0% | |
| TGTACTATTCATGTGCTTCT+AGG | - | chr3.3:1575780-1575799 | MS.gene53040:intron | 35.0% | |
| TGTGCAAGAAATTTAACGTC+TGG | - | chr3.3:1573620-1573639 | MS.gene53040:intron | 35.0% | |
| TTCCAAGTGTAATACGAAAG+TGG | + | chr3.3:1574146-1574165 | None:intergenic | 35.0% | |
| TTCTCTGAACATTGATGTGA+GGG | + | chr3.3:1573733-1573752 | None:intergenic | 35.0% | |
| TTCTTATGTGCAGGAAATGA+TGG | - | chr3.3:1573831-1573850 | MS.gene53040:CDS | 35.0% | |
| TTGAAGCTCATTAATCACTC+GGG | + | chr3.3:1572684-1572703 | None:intergenic | 35.0% | |
| TTGGTCAAAGATAAACAGAC+GGG | - | chr3.3:1573462-1573481 | MS.gene53040:intron | 35.0% | |
| TTTAACGTATCATGAACCGA+TGG | - | chr3.3:1573660-1573679 | MS.gene53040:intron | 35.0% | |
| TTTAAGGGGTTAATCTTGGA+TGG | + | chr3.3:1576961-1576980 | None:intergenic | 35.0% | |
| TTTCATAATTCTACGGTGTG+GGG | + | chr3.3:1572959-1572978 | None:intergenic | 35.0% | |
| TTTCTCTGAACATTGATGTG+AGG | + | chr3.3:1573734-1573753 | None:intergenic | 35.0% | |
| ! | AAAGTGTGTTGTACTTGTTG+AGG | - | chr3.3:1571178-1571197 | MS.gene53040:CDS | 35.0% |
| ! | ATAAGCTTTGTGAGACTGTT+TGG | + | chr3.3:1571717-1571736 | None:intergenic | 35.0% |
| ! | CCAAATAAAGTATCACCGAT+AGG | + | chr3.3:1575388-1575407 | None:intergenic | 35.0% |
| ! | CCAGATTGATGGTTTCTTAT+TGG | - | chr3.3:1572130-1572149 | MS.gene53040:intron | 35.0% |
| ! | CTTGGATATGATGTCTTTTC+AGG | - | chr3.3:1576887-1576906 | MS.gene53040:CDS | 35.0% |
| ! | TAAGCTTTGTGAGACTGTTT+GGG | + | chr3.3:1571716-1571735 | None:intergenic | 35.0% |
| ! | TAATCTGAAATTCGGCTAGA+AGG | + | chr3.3:1572774-1572793 | None:intergenic | 35.0% |
| ! | TACTTCTGTTACTTCTAGCT+AGG | - | chr3.3:1576764-1576783 | MS.gene53040:intron | 35.0% |
| ! | TATCATTTGGGTTAACTTCC+TGG | - | chr3.3:1573261-1573280 | MS.gene53040:intron | 35.0% |
| ! | TCATCGCCAATACAATTTTC+TGG | - | chr3.3:1574965-1574984 | MS.gene53040:intron | 35.0% |
| ! | TGGTTAGTTGGGTTGTAAAT+AGG | - | chr3.3:1576003-1576022 | MS.gene53040:intron | 35.0% |
| ! | TTAAAATTGGTGATCTTGGG+TGG | - | chr3.3:1573757-1573776 | MS.gene53040:intron | 35.0% |
| ! | TTTGATTTATTCAGTGCTCC+TGG | + | chr3.3:1574885-1574904 | None:intergenic | 35.0% |
| !! | ATCCAATCTAATGGATTCGT+TGG | - | chr3.3:1573343-1573362 | MS.gene53040:intron | 35.0% |
| !! | GAAACCATGTGCAGTTTTAA+AGG | - | chr3.3:1574931-1574950 | MS.gene53040:CDS | 35.0% |
| !! | GATGGTACAAACCTTTTTCA+TGG | + | chr3.3:1576943-1576962 | None:intergenic | 35.0% |
| !! | GGATCATCCTCTTAGTTTTT+AGG | - | chr3.3:1572837-1572856 | MS.gene53040:intron | 35.0% |
| !! | GTTAAGGGTATCCAATCTAA+TGG | - | chr3.3:1573334-1573353 | MS.gene53040:intron | 35.0% |
| !! | TTTCAATATTGGTGCTGTGT+AGG | - | chr3.3:1572265-1572284 | MS.gene53040:CDS | 35.0% |
| !! | TTTTAACTCTTCGGTTCACA+GGG | + | chr3.3:1572803-1572822 | None:intergenic | 35.0% |
| !!! | AGATATTCATTTTGGGGTTC+GGG | - | chr3.3:1576378-1576397 | MS.gene53040:intron | 35.0% |
| !!! | TGGTTTTGTCATGCAGATTT+TGG | + | chr3.3:1574865-1574884 | None:intergenic | 35.0% |
| AAATGTCTGCGATCACTACT+GGG | + | chr3.3:1577679-1577698 | None:intergenic | 40.0% | |
| AACGATTGTTTCAACGGAAC+AGG | + | chr3.3:1576241-1576260 | None:intergenic | 40.0% | |
| AAGGGAATTTAAGTGGCTAG+CGG | - | chr3.3:1573293-1573312 | MS.gene53040:intron | 40.0% | |
| AATCTGACAATCACTGGAAC+TGG | - | chr3.3:1573154-1573173 | MS.gene53040:intron | 40.0% | |
| ACAATTGAGTCATCTCCATC+AGG | + | chr3.3:1574764-1574783 | None:intergenic | 40.0% | |
| ACAGCCTCATAGTCTAAAAG+AGG | + | chr3.3:1577859-1577878 | None:intergenic | 40.0% | |
| ACGTTAAGTGGCTTCCTATT+TGG | - | chr3.3:1572913-1572932 | MS.gene53040:intron | 40.0% | |
| AGAACACTCCTATAGATCCA+TGG | - | chr3.3:1578011-1578030 | MS.gene53040:CDS | 40.0% | |
| AGAGAAGAGAAGTGAGTGTT+GGG | + | chr3.3:1571232-1571251 | None:intergenic | 40.0% | |
| AGAGAGGGTAATAGTGGTTA+TGG | - | chr3.3:1573798-1573817 | MS.gene53040:CDS | 40.0% | |
| AGCATGGAATCAAAGTTGCT+AGG | - | chr3.3:1574481-1574500 | MS.gene53040:intron | 40.0% | |
| AGCCGAATTTCAGATTACCA+AGG | - | chr3.3:1572777-1572796 | MS.gene53040:CDS | 40.0% | |
| AGCTCGACTGACAATAATCA+CGG | + | chr3.3:1574375-1574394 | None:intergenic | 40.0% | |
| AGGGATACTACACATGAGTA+CGG | - | chr3.3:1575967-1575986 | MS.gene53040:intron | 40.0% | |
| AGTTCCAGTGATTGTCAGAT+TGG | + | chr3.3:1573155-1573174 | None:intergenic | 40.0% | |
| ATAACCACGGCTCAATTGTA+AGG | + | chr3.3:1577221-1577240 | None:intergenic | 40.0% | |
| ATAGTACAGTCACGGAACTT+TGG | + | chr3.3:1573051-1573070 | None:intergenic | 40.0% | |
| ATCATGACTCCTCATATTGC+AGG | - | chr3.3:1577982-1578001 | MS.gene53040:CDS | 40.0% | |
| ATCTGTCATGTCATACGACT+AGG | + | chr3.3:1571778-1571797 | None:intergenic | 40.0% | |
| ATGATAGTTGGCAATAGCCT+TGG | + | chr3.3:1574255-1574274 | None:intergenic | 40.0% | |
| ATGGAATCAGCCAACAACAT+AGG | - | chr3.3:1573850-1573869 | MS.gene53040:intron | 40.0% | |
| ATGTCCTCATGTTTGGGTAT+GGG | - | chr3.3:1575041-1575060 | MS.gene53040:intron | 40.0% | |
| CAAGTGTAATACGAAAGTGG+TGG | + | chr3.3:1574143-1574162 | None:intergenic | 40.0% | |
| CACCACTTTCGTATTACACT+TGG | - | chr3.3:1574141-1574160 | MS.gene53040:intron | 40.0% | |
| CAGAATGGCAGTTAAGAAAC+AGG | - | chr3.3:1573566-1573585 | MS.gene53040:intron | 40.0% | |
| CAGGAGTGATGAATACAGAA+TGG | - | chr3.3:1573551-1573570 | MS.gene53040:intron | 40.0% | |
| CATCGATATCAACACCTAAG+AGG | + | chr3.3:1574452-1574471 | None:intergenic | 40.0% | |
| CGAGAAGAGAAAAAGATGCA+GGG | + | chr3.3:1575167-1575186 | None:intergenic | 40.0% | |
| CGTATGACATGACAGATTGA+TGG | - | chr3.3:1571781-1571800 | MS.gene53040:intron | 40.0% | |
| CGTTGGAGAAGAATGTTGAA+GGG | - | chr3.3:1573360-1573379 | MS.gene53040:intron | 40.0% | |
| CTACAACAACTCAAGATTCG+AGG | - | chr3.3:1571250-1571269 | MS.gene53040:CDS | 40.0% | |
| CTCCAACGAATCCATTAGAT+TGG | + | chr3.3:1573348-1573367 | None:intergenic | 40.0% | |
| CTCTAGCAACATTAACCAGA+AGG | + | chr3.3:1577834-1577853 | None:intergenic | 40.0% | |
| CTGCACATGGTTTCTACAAT+TGG | + | chr3.3:1574925-1574944 | None:intergenic | 40.0% | |
| GCACAGAAGTAAATGAAGAG+AGG | - | chr3.3:1573782-1573801 | MS.gene53040:intron | 40.0% | |
| GCAGAATCATCCATCTATCA+AGG | - | chr3.3:1572404-1572423 | MS.gene53040:intron | 40.0% | |
| GCAGGTCAACTAAAAGAAAC+TGG | - | chr3.3:1574998-1575017 | MS.gene53040:intron | 40.0% | |
| GCCAAAAATTCCAGCATACT+AGG | + | chr3.3:1576852-1576871 | None:intergenic | 40.0% | |
| GCTGTGTAGGAAAAATCTGA+TGG | - | chr3.3:1572278-1572297 | MS.gene53040:CDS | 40.0% | |
| GTAAAAGTTGCACCACATGA+GGG | + | chr3.3:1576300-1576319 | None:intergenic | 40.0% | |
| GTGGTCAAAAACCTTGAATC+CGG | - | chr3.3:1577877-1577896 | MS.gene53040:intron | 40.0% | |
| TAACCACGGCTCAATTGTAA+GGG | + | chr3.3:1577220-1577239 | None:intergenic | 40.0% | |
| TAGAGAAGAGAAGTGAGTGT+TGG | + | chr3.3:1571233-1571252 | None:intergenic | 40.0% | |
| TATTGCTACAAAGCGGAGTT+GGG | - | chr3.3:1576451-1576470 | MS.gene53040:intron | 40.0% | |
| TCATACAACTAAGGCCTGTT+TGG | + | chr3.3:1572106-1572125 | None:intergenic | 40.0% | |
| TCATCAAAAGCAATGTCCCA+TGG | + | chr3.3:1575482-1575501 | None:intergenic | 40.0% | |
| TCCAGCCAGGAATCAAATTT+GGG | + | chr3.3:1572731-1572750 | None:intergenic | 40.0% | |
| TCGTTGGAGAAGAATGTTGA+AGG | - | chr3.3:1573359-1573378 | MS.gene53040:intron | 40.0% | |
| TCTGGCATGTCATACAACTA+AGG | + | chr3.3:1572115-1572134 | None:intergenic | 40.0% | |
| TCTGTCATGTCATACGACTA+GGG | + | chr3.3:1571777-1571796 | None:intergenic | 40.0% | |
| TGATAGTTGGCAATAGCCTT+GGG | + | chr3.3:1574254-1574273 | None:intergenic | 40.0% | |
| TGCAGATTTCCATACAGCAA+AGG | - | chr3.3:1575350-1575369 | MS.gene53040:intron | 40.0% | |
| TGGGAAAGCCATAATTGCTT+TGG | - | chr3.3:1575060-1575079 | MS.gene53040:intron | 40.0% | |
| TGTAAAAGTTGCACCACATG+AGG | + | chr3.3:1576301-1576320 | None:intergenic | 40.0% | |
| TGTATGACATGCCAGATTGA+TGG | - | chr3.3:1572119-1572138 | MS.gene53040:intron | 40.0% | |
| TTATTGCTACAAAGCGGAGT+TGG | - | chr3.3:1576450-1576469 | MS.gene53040:intron | 40.0% | |
| TTCAGTTGCATGTGCTGAAA+TGG | - | chr3.3:1574527-1574546 | MS.gene53040:intron | 40.0% | |
| TTCCAGCCAGGAATCAAATT+TGG | + | chr3.3:1572732-1572751 | None:intergenic | 40.0% | |
| TTTCAGTTACGCTATCCTGA+TGG | - | chr3.3:1574746-1574765 | MS.gene53040:intron | 40.0% | |
| ! | AGGAGTTACCAGCTTTTGAT+GGG | - | chr3.3:1573586-1573605 | MS.gene53040:intron | 40.0% |
| ! | AGGTCCTCTTTTAGACTATG+AGG | - | chr3.3:1577852-1577871 | MS.gene53040:intron | 40.0% |
| ! | ATGAGTAGTGGAATGAATGG+AGG | - | chr3.3:1573400-1573419 | MS.gene53040:intron | 40.0% |
| ! | CAAGGTCCATTCTGTGTTTT+AGG | - | chr3.3:1577100-1577119 | MS.gene53040:intron | 40.0% |
| ! | CACTAATAGTCGCTCTGAAT+TGG | + | chr3.3:1573426-1573445 | None:intergenic | 40.0% |
| ! | CATTTGTTTCTTCCCTCATG+TGG | - | chr3.3:1576285-1576304 | MS.gene53040:intron | 40.0% |
| ! | CTTAAAAAGGAGCGTGAAGT+GGG | - | chr3.3:1575585-1575604 | MS.gene53040:intron | 40.0% |
| ! | CTTCTGGTTAATGTTGCTAG+AGG | - | chr3.3:1577832-1577851 | MS.gene53040:intron | 40.0% |
| ! | GCCTAGTATGCTGGAATTTT+TGG | - | chr3.3:1576848-1576867 | MS.gene53040:CDS | 40.0% |
| ! | GGCATGCATACTTATTGACT+TGG | - | chr3.3:1576869-1576888 | MS.gene53040:CDS | 40.0% |
| ! | GGCCTTGGTAATCTGAAATT+CGG | + | chr3.3:1572782-1572801 | None:intergenic | 40.0% |
| ! | TCTTTTAGACTATGAGGCTG+TGG | - | chr3.3:1577858-1577877 | MS.gene53040:intron | 40.0% |
| ! | TTGAGATTAAGGCCCTGTTT+TGG | - | chr3.3:1571502-1571521 | MS.gene53040:intron | 40.0% |
| !! | ACTGAAATAGATCGGCTTGT+TGG | - | chr3.3:1576085-1576104 | MS.gene53040:intron | 40.0% |
| !! | CTGAAATAGATCGGCTTGTT+GGG | - | chr3.3:1576086-1576105 | MS.gene53040:intron | 40.0% |
| !! | GAGGCTCTGAAATTCATGTA+AGG | - | chr3.3:1575814-1575833 | MS.gene53040:intron | 40.0% |
| !! | GATATGATGTCTTTTCAGGC+TGG | - | chr3.3:1576891-1576910 | MS.gene53040:CDS | 40.0% |
| !! | TGATGATGGTTAGTTGCATG+AGG | - | chr3.3:1575496-1575515 | MS.gene53040:intron | 40.0% |
| !! | TGGGACATTGCTTTTGATGA+TGG | - | chr3.3:1575482-1575501 | MS.gene53040:intron | 40.0% |
| !! | TGTCAGTCGAGCTTTATTGA+TGG | - | chr3.3:1574382-1574401 | MS.gene53040:intron | 40.0% |
| !! | TTTAGGTGTCTGATGGACTT+TGG | - | chr3.3:1575631-1575650 | MS.gene53040:intron | 40.0% |
| !! | TTTCTTTTAGTTGACCTGCG+AGG | + | chr3.3:1574997-1575016 | None:intergenic | 40.0% |
| !!! | ACCATGTGCAGTTTTAAAGG+CGG | - | chr3.3:1574934-1574953 | MS.gene53040:CDS | 40.0% |
| !!! | ACGACTCGTGTTTTGTTTTG+TGG | - | chr3.3:1572339-1572358 | MS.gene53040:intron | 40.0% |
| !!! | GGATGTGTTTTTTGATCCAG+AGG | - | chr3.3:1572985-1573004 | MS.gene53040:intron | 40.0% |
| !!! | GTTTTAACTCTTCGGTTCAC+AGG | + | chr3.3:1572804-1572823 | None:intergenic | 40.0% |
| AACCTTGAATCCGGACACTT+AGG | - | chr3.3:1577886-1577905 | MS.gene53040:intron | 45.0% | |
| AAGCAGTAATCCACGAGAAC+AGG | + | chr3.3:1576525-1576544 | None:intergenic | 45.0% | |
| AATCACTGGAACTGGTGTGA+TGG | - | chr3.3:1573162-1573181 | MS.gene53040:intron | 45.0% | |
| AATGCTCAGAGGAGATTCCT+AGG | + | chr3.3:1575873-1575892 | None:intergenic | 45.0% | |
| AATTTCCAGTAGCACCACTG+GGG | + | chr3.3:1574509-1574528 | None:intergenic | 45.0% | |
| ACCCAAATTTGATTCCTGGC+TGG | - | chr3.3:1572727-1572746 | MS.gene53040:CDS | 45.0% | |
| AGATGAGAACATGGGAACTG+AGG | + | chr3.3:1572366-1572385 | None:intergenic | 45.0% | |
| AGCAGTAATCCACGAGAACA+GGG | + | chr3.3:1576524-1576543 | None:intergenic | 45.0% | |
| AGTACGGGGCGATACAATTA+TGG | - | chr3.3:1575983-1576002 | MS.gene53040:intron | 45.0% | |
| AGTAGCCTAAGGCTGTAAGT+TGG | - | chr3.3:1577388-1577407 | MS.gene53040:intron | 45.0% | |
| ATCGATGCTGCAACAAAGCA+TGG | - | chr3.3:1574465-1574484 | MS.gene53040:intron | 45.0% | |
| CAAAGATAAACAGACGGGCA+CGG | - | chr3.3:1573467-1573486 | MS.gene53040:intron | 45.0% | |
| CAACTAAGGCCTGTTTGGAT+TGG | + | chr3.3:1572101-1572120 | None:intergenic | 45.0% | |
| CAATTGTAAGGGAACATCCC+AGG | + | chr3.3:1577209-1577228 | None:intergenic | 45.0% | |
| CATGTCCTCATGTTTGGGTA+TGG | - | chr3.3:1575040-1575059 | MS.gene53040:intron | 45.0% | |
| CCTTGGGAATTTCTTCCAAC+GGG | + | chr3.3:1574238-1574257 | None:intergenic | 45.0% | |
| CTCGTTAAGCCAATCCAAAC+AGG | - | chr3.3:1572089-1572108 | MS.gene53040:intron | 45.0% | |
| CTGAACATTGATGTGAGGGA+CGG | + | chr3.3:1573729-1573748 | None:intergenic | 45.0% | |
| CTTTCCCATACCCAAACATG+AGG | + | chr3.3:1575048-1575067 | None:intergenic | 45.0% | |
| GAAATGTCTGCGATCACTAC+TGG | + | chr3.3:1577680-1577699 | None:intergenic | 45.0% | |
| GAATTTCCAGTAGCACCACT+GGG | + | chr3.3:1574510-1574529 | None:intergenic | 45.0% | |
| GAGATCATCCTCTAACCAAG+TGG | - | chr3.3:1572653-1572672 | MS.gene53040:intron | 45.0% | |
| GATGCCAATCTGACAATCAC+TGG | - | chr3.3:1573148-1573167 | MS.gene53040:intron | 45.0% | |
| GCACGACGATTGAAACCATT+TGG | - | chr3.3:1576419-1576438 | MS.gene53040:intron | 45.0% | |
| GCCTTGGGAATTTCTTCCAA+CGG | + | chr3.3:1574239-1574258 | None:intergenic | 45.0% | |
| GCGAGAAGAGAAAAAGATGC+AGG | + | chr3.3:1575168-1575187 | None:intergenic | 45.0% | |
| GGATACTACACATGAGTACG+GGG | - | chr3.3:1575969-1575988 | MS.gene53040:intron | 45.0% | |
| GGATGAAGATGAAACCGATG+AGG | - | chr3.3:1571362-1571381 | MS.gene53040:intron | 45.0% | |
| GGCTTAACGAGCTTATCTAC+TGG | + | chr3.3:1572080-1572099 | None:intergenic | 45.0% | |
| GGGATACTACACATGAGTAC+GGG | - | chr3.3:1575968-1575987 | MS.gene53040:intron | 45.0% | |
| TCATACGACTAGGGTCTGTT+TGG | + | chr3.3:1571768-1571787 | None:intergenic | 45.0% | |
| TCATCCTCTAACCAAGTGGA+TGG | - | chr3.3:1572657-1572676 | MS.gene53040:intron | 45.0% | |
| TCCATACAGCAAAGGAAGCT+TGG | - | chr3.3:1575358-1575377 | MS.gene53040:intron | 45.0% | |
| TCCTCAAGTCAGCATGTGAT+TGG | + | chr3.3:1577430-1577449 | None:intergenic | 45.0% | |
| TCTGTAACGCCTGCAATATG+AGG | + | chr3.3:1577994-1578013 | None:intergenic | 45.0% | |
| TGAATTTCCAGTAGCACCAC+TGG | + | chr3.3:1574511-1574530 | None:intergenic | 45.0% | |
| TTGAATCCGGACACTTAGGA+GGG | - | chr3.3:1577890-1577909 | MS.gene53040:intron | 45.0% | |
| TTGTGTCCAGGTGCACAAAA+GGG | + | chr3.3:1575195-1575214 | None:intergenic | 45.0% | |
| TTGTTTCAACGGAACAGGCT+AGG | + | chr3.3:1576236-1576255 | None:intergenic | 45.0% | |
| TTTGTGTCCAGGTGCACAAA+AGG | + | chr3.3:1575196-1575215 | None:intergenic | 45.0% | |
| ! | AACTAAGATCGGCTCAAGCT+AGG | - | chr3.3:1576174-1576193 | MS.gene53040:intron | 45.0% |
| ! | AATGGCATATGCTTTGGGTG+CGG | - | chr3.3:1573694-1573713 | MS.gene53040:intron | 45.0% |
| ! | ATTTTCCTTCCCTGTTCTCG+TGG | - | chr3.3:1576512-1576531 | MS.gene53040:intron | 45.0% |
| ! | CAGAGCTGATTCTTATGTGC+AGG | - | chr3.3:1573822-1573841 | MS.gene53040:CDS | 45.0% |
| ! | CAGGAGTTACCAGCTTTTGA+TGG | - | chr3.3:1573585-1573604 | MS.gene53040:intron | 45.0% |
| ! | CCACTTCACGCTCCTTTTTA+AGG | + | chr3.3:1575587-1575606 | None:intergenic | 45.0% |
| ! | CCTTAAAAAGGAGCGTGAAG+TGG | - | chr3.3:1575584-1575603 | MS.gene53040:intron | 45.0% |
| ! | CTAGAAGGTACGTCTGACTA+AGG | + | chr3.3:1572759-1572778 | None:intergenic | 45.0% |
| ! | GCATGACAGATTTTGTGTCC+AGG | + | chr3.3:1575207-1575226 | None:intergenic | 45.0% |
| ! | GGAGTTACCAGCTTTTGATG+GGG | - | chr3.3:1573587-1573606 | MS.gene53040:intron | 45.0% |
| ! | GGCATGAGTAGTGGAATGAA+TGG | - | chr3.3:1573397-1573416 | MS.gene53040:intron | 45.0% |
| ! | GTAAGTTGGAGGACATAGTG+AGG | - | chr3.3:1577402-1577421 | MS.gene53040:intron | 45.0% |
| ! | TCCAAGCTTCCTTTGCTGTA+TGG | + | chr3.3:1575362-1575381 | None:intergenic | 45.0% |
| ! | TTTATTTCAGGGTGCCCTTC+TGG | - | chr3.3:1577816-1577835 | MS.gene53040:intron | 45.0% |
| !! | AATGTTGAAGGGCTAGCTTC+TGG | - | chr3.3:1573371-1573390 | MS.gene53040:intron | 45.0% |
| !! | ACCGCCTTTAAAACTGCACA+TGG | + | chr3.3:1574938-1574957 | None:intergenic | 45.0% |
| !! | AGAAGGGCACCCTGAAATAA+AGG | + | chr3.3:1577817-1577836 | None:intergenic | 45.0% |
| !! | ATGTTGAAGGGCTAGCTTCT+GGG | - | chr3.3:1573372-1573391 | MS.gene53040:intron | 45.0% |
| !! | CCATTGCTTTTCCTCTCCAT+CGG | + | chr3.3:1573679-1573698 | None:intergenic | 45.0% |
| !! | TCCAATCACATGCTGACTTG+AGG | - | chr3.3:1577426-1577445 | MS.gene53040:intron | 45.0% |
| !!! | ATTTTGGGGTTCGGGAACAT+TGG | - | chr3.3:1576386-1576405 | MS.gene53040:intron | 45.0% |
| !!! | TTTAATTTTTTTTTTTATCA+AGG | - | chr3.3:1575895-1575914 | MS.gene53040:intron | 5.0% |
| AAAGTTGCTAGGATCCCCAG+TGG | - | chr3.3:1574492-1574511 | MS.gene53040:intron | 50.0% | |
| AGCTAGGTCTGATGTAGGCT+AGG | - | chr3.3:1576190-1576209 | MS.gene53040:intron | 50.0% | |
| AGGAACCGATGTTGCATGGA+CGG | - | chr3.3:1577915-1577934 | MS.gene53040:intron | 50.0% | |
| AGGAAGCTTGGAGAGCCTAT+CGG | - | chr3.3:1575370-1575389 | MS.gene53040:intron | 50.0% | |
| ATGTGCTTCTAGGCTGTGTC+TGG | - | chr3.3:1575790-1575809 | MS.gene53040:intron | 50.0% | |
| CAAAACTGAGCTGTAGCAGC+AGG | - | chr3.3:1573532-1573551 | MS.gene53040:intron | 50.0% | |
| CCCGTTGGAAGAAATTCCCA+AGG | - | chr3.3:1574235-1574254 | MS.gene53040:intron | 50.0% | |
| CCGATGGAGAGGAAAAGCAA+TGG | - | chr3.3:1573676-1573695 | MS.gene53040:intron | 50.0% | |
| CGACTAGGGTCTGTTTGGAT+TGG | + | chr3.3:1571763-1571782 | None:intergenic | 50.0% | |
| CGTATCATGAACCGATGGAG+AGG | - | chr3.3:1573665-1573684 | MS.gene53040:intron | 50.0% | |
| CTCCTAAGTGTCCGGATTCA+AGG | + | chr3.3:1577891-1577910 | None:intergenic | 50.0% | |
| CTTGAATCCGGACACTTAGG+AGG | - | chr3.3:1577889-1577908 | MS.gene53040:intron | 50.0% | |
| GACTAAGGATTGTTCCAGCC+AGG | + | chr3.3:1572744-1572763 | None:intergenic | 50.0% | |
| GCTCAAGCTAGGTCTGATGT+AGG | - | chr3.3:1576185-1576204 | MS.gene53040:intron | 50.0% | |
| GGATTTGCCCCATCAAAAGC+TGG | + | chr3.3:1573597-1573616 | None:intergenic | 50.0% | |
| GGTATCTATCATGGGGCTTG+TGG | - | chr3.3:1574003-1574022 | MS.gene53040:intron | 50.0% | |
| GTAATCCACGAGAACAGGGA+AGG | + | chr3.3:1576520-1576539 | None:intergenic | 50.0% | |
| GTCCTCCAACTTACAGCCTT+AGG | + | chr3.3:1577396-1577415 | None:intergenic | 50.0% | |
| GTGAAGTGGGTAGATGATCC+AGG | - | chr3.3:1575598-1575617 | MS.gene53040:intron | 50.0% | |
| GTTCCCTTACAATTGAGCCG+TGG | - | chr3.3:1577214-1577233 | MS.gene53040:intron | 50.0% | |
| TCCAGGTGCACAAAAGGGAA+TGG | + | chr3.3:1575190-1575209 | None:intergenic | 50.0% | |
| TCTGATGTAGGCTAGGCCAT+AGG | - | chr3.3:1576197-1576216 | MS.gene53040:intron | 50.0% | |
| TGCACACACACACACACGTA+GGG | - | chr3.3:1577076-1577095 | MS.gene53040:intron | 50.0% | |
| TTGTAAGGGAACATCCCAGG+AGG | + | chr3.3:1577206-1577225 | None:intergenic | 50.0% | |
| ! | AATGCAGTATGGTGTTGGGC+TGG | - | chr3.3:1574343-1574362 | MS.gene53040:intron | 50.0% |
| ! | AGCCTAAGGCTGTAAGTTGG+AGG | - | chr3.3:1577391-1577410 | MS.gene53040:intron | 50.0% |
| ! | CTGCTGCTACAGCTCAGTTT+TGG | + | chr3.3:1573534-1573553 | None:intergenic | 50.0% |
| ! | TATGCTTTGGGTGCGGAGAA+AGG | - | chr3.3:1573701-1573720 | MS.gene53040:intron | 50.0% |
| !! | CTTTTAGTTGACCTGCGAGG+TGG | + | chr3.3:1574994-1575013 | None:intergenic | 50.0% |
| !! | GTAGGTTGATGTTCTCCCGT+TGG | - | chr3.3:1574220-1574239 | MS.gene53040:intron | 50.0% |
| !! | TTCTGGGTTGGCATGAGTAG+TGG | - | chr3.3:1573388-1573407 | MS.gene53040:intron | 50.0% |
| !! | TTTTCTGGTAACCACCTCGC+AGG | - | chr3.3:1574980-1574999 | MS.gene53040:intron | 50.0% |
| AGGCCATAGGCTCCATTGAC+CGG | - | chr3.3:1576210-1576229 | MS.gene53040:intron | 55.0% | |
| ATCACTCGGGACCATCCACT+TGG | + | chr3.3:1572671-1572690 | None:intergenic | 55.0% | |
| CACACACACACGTAGGGTCA+AGG | - | chr3.3:1577082-1577101 | MS.gene53040:intron | 55.0% | |
| CTACTGGGTTCAAGCGCAAG+AGG | + | chr3.3:1577664-1577683 | None:intergenic | 55.0% | |
| CTTCTAGGCTGTGTCTGGAG+AGG | - | chr3.3:1575795-1575814 | MS.gene53040:intron | 55.0% | |
| GGCTAGGAACCGATGTTGCA+TGG | - | chr3.3:1577911-1577930 | MS.gene53040:intron | 55.0% | |
| GGGACCATCCACTTGGTTAG+AGG | + | chr3.3:1572664-1572683 | None:intergenic | 55.0% | |
| GTGCACACACACACACACGT+AGG | - | chr3.3:1577075-1577094 | MS.gene53040:intron | 55.0% | |
| TCCTAGCCCTCCTAAGTGTC+CGG | + | chr3.3:1577899-1577918 | None:intergenic | 55.0% | |
| TGGCTCCGTCCATGCAACAT+CGG | + | chr3.3:1577923-1577942 | None:intergenic | 55.0% | |
| TGGGTTCAAGCGCAAGAGGT+TGG | + | chr3.3:1577660-1577679 | None:intergenic | 55.0% | |
| TTCAACGGAACAGGCTAGGC+CGG | + | chr3.3:1576232-1576251 | None:intergenic | 55.0% | |
| ! | CAGTATGGTGTTGGGCTGGA+AGG | - | chr3.3:1574347-1574366 | MS.gene53040:intron | 55.0% |
| ! | GCCATTCCCTTTTGTGCACC+TGG | - | chr3.3:1575186-1575205 | MS.gene53040:intron | 55.0% |
| !! | TGAAGGGCTAGCTTCTGGGT+TGG | - | chr3.3:1573376-1573395 | MS.gene53040:intron | 55.0% |
| AGGCCGGTCAATGGAGCCTA+TGG | + | chr3.3:1576216-1576235 | None:intergenic | 60.0% | |
| CTCTTCGGTTCACAGGGCCT+TGG | + | chr3.3:1572797-1572816 | None:intergenic | 60.0% | |
| GAACAGGCTAGGCCGGTCAA+TGG | + | chr3.3:1576225-1576244 | None:intergenic | 60.0% | |
| TCCGGACACTTAGGAGGGCT+AGG | - | chr3.3:1577895-1577914 | MS.gene53040:intron | 60.0% | |
| !! | AGGATCCCCAGTGGTGCTAC+TGG | - | chr3.3:1574501-1574520 | MS.gene53040:intron | 60.0% |
| !! | AGCGCAAGAGGTTGGTGCGC+AGG | + | chr3.3:1577652-1577671 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1571168 | 1578038 | 1571168 | ID=MS.gene53040 |
| chr3.3 | mRNA | 1571168 | 1578038 | 1571168 | ID=MS.gene53040.t1;Parent=MS.gene53040 |
| chr3.3 | exon | 1577935 | 1578038 | 1577935 | ID=MS.gene53040.t1.exon1;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1577935 | 1578038 | 1577935 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1576781 | 1576919 | 1576781 | ID=MS.gene53040.t1.exon2;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1576781 | 1576919 | 1576781 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1574838 | 1574982 | 1574838 | ID=MS.gene53040.t1.exon3;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1574838 | 1574982 | 1574838 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1574622 | 1574749 | 1574622 | ID=MS.gene53040.t1.exon4;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1574622 | 1574749 | 1574622 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1573792 | 1573863 | 1573792 | ID=MS.gene53040.t1.exon5;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1573792 | 1573863 | 1573792 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1572697 | 1572826 | 1572697 | ID=MS.gene53040.t1.exon6;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1572697 | 1572826 | 1572697 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1572497 | 1572603 | 1572497 | ID=MS.gene53040.t1.exon7;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1572497 | 1572603 | 1572497 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1572256 | 1572297 | 1572256 | ID=MS.gene53040.t1.exon8;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1572256 | 1572297 | 1572256 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| chr3.3 | exon | 1571168 | 1571380 | 1571168 | ID=MS.gene53040.t1.exon9;Parent=MS.gene53040.t1 |
| chr3.3 | CDS | 1571168 | 1571380 | 1571168 | ID=cds.MS.gene53040.t1;Parent=MS.gene53040.t1 |
| Gene Sequence |
| Protein sequence |
