Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53862.t1 | XP_003600574.1 | 96.6 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 2.60E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53862.t1 | G7IV74 | 96.6 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 1.9e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene53862 | -0.808633 | 2.81E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene53862 | -0.804995 | 1.65E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene53862 | -0.808478 | 3.04E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene53862 | -0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene53862 | -0.833135 | 6.35E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene53862 | -0.842921 | 1.92E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene53862 | -0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene53862 | -0.827025 | 1.96E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene53862 | -0.812516 | 4.08E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene53862 | 0.809785 | 1.59E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene53862 | -0.801564 | 8.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53862.t1 | MTR_3g062850 | 96.637 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 858 |
| MS.gene53862.t1 | MTR_7g074150 | 47.884 | 378 | 166 | 10 | 1 | 373 | 1 | 352 | 3.40e-93 | 287 |
| MS.gene53862.t1 | MTR_8g005120 | 58.791 | 182 | 61 | 4 | 213 | 380 | 132 | 313 | 5.22e-58 | 194 |
| MS.gene53862.t1 | MTR_7g094870 | 34.263 | 251 | 131 | 5 | 147 | 378 | 53 | 288 | 3.49e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53862.t1 | AT2G30530 | 59.627 | 322 | 98 | 8 | 52 | 371 | 57 | 348 | 2.23e-98 | 300 |
| MS.gene53862.t1 | AT5G01970 | 55.363 | 289 | 111 | 4 | 87 | 371 | 35 | 309 | 4.44e-95 | 290 |
| MS.gene53862.t1 | AT5G01970 | 64.623 | 212 | 70 | 3 | 164 | 371 | 2 | 212 | 4.01e-84 | 259 |
| MS.gene53862.t1 | AT1G30050 | 46.011 | 376 | 126 | 10 | 1 | 370 | 1 | 305 | 6.98e-82 | 258 |
| MS.gene53862.t1 | AT4G02800 | 36.098 | 205 | 119 | 2 | 161 | 355 | 79 | 281 | 2.36e-32 | 125 |
Find 110 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAAGTGATTCGAATTT+TGG | 0.069894 | 3.1:+52776605 | None:intergenic |
| TCTTCGCTTTCGTCGCTTTA+TGG | 0.109391 | 3.1:-52779072 | MS.gene53862:CDS |
| CTTTATATCCTTTCCTGATA+TGG | 0.141349 | 3.1:+52772628 | None:intergenic |
| CTCCTTGCGTTGGCGACATC+TGG | 0.173544 | 3.1:+52776135 | None:intergenic |
| GTCCCAGGTATTTCAGATTC+TGG | 0.193774 | 3.1:+52777253 | None:intergenic |
| GCGACATCTGGGACCGCAAC+TGG | 0.216020 | 3.1:+52776147 | None:intergenic |
| ATGAGCCCAAGAGTGGATTT+TGG | 0.240487 | 3.1:-52777327 | MS.gene53862:CDS |
| GGACAGTCCGACAATTATTA+AGG | 0.278402 | 3.1:-52776566 | MS.gene53862:CDS |
| GAAGAAGACGGTGTAATAAT+TGG | 0.289785 | 3.1:+52779177 | None:intergenic |
| CCAAAGCAAAACTGCTTCTT+CGG | 0.293791 | 3.1:-52774877 | MS.gene53862:CDS |
| GACGGTGTAATAATTGGATT+AGG | 0.303446 | 3.1:+52779183 | None:intergenic |
| TGGCACCATTGGTAAATCTT+TGG | 0.322461 | 3.1:-52776506 | MS.gene53862:CDS |
| GGCATTTCATCTCCCATATC+AGG | 0.332511 | 3.1:-52772641 | MS.gene53862:CDS |
| TGGCATCTGAAGACATTGAT+AGG | 0.340914 | 3.1:+52772693 | None:intergenic |
| TTAGAATCGAGGGGCATAAT+AGG | 0.343574 | 3.1:+52772734 | None:intergenic |
| TTTATATCCTTTCCTGATAT+GGG | 0.343848 | 3.1:+52772629 | None:intergenic |
| TTCTGATCCCATGCCAAGAT+TGG | 0.373653 | 3.1:+52772673 | None:intergenic |
| TAGCCAAGATGATGATGATT+TGG | 0.376397 | 3.1:-52774753 | MS.gene53862:intron |
| CGTTGACACTTCTTCAACTT+CGG | 0.385273 | 3.1:-52779142 | MS.gene53862:CDS |
| AGGAAACCCGTAAACATATC+AGG | 0.396756 | 3.1:-52776235 | MS.gene53862:CDS |
| CGACATCTGGGACCGCAACT+GGG | 0.398383 | 3.1:+52776148 | None:intergenic |
| CCAAAATTCGAATCACTTAG+AGG | 0.398799 | 3.1:-52776605 | MS.gene53862:CDS |
| GAAGACTGTCAAGGCTGATC+TGG | 0.400598 | 3.1:-52774849 | MS.gene53862:CDS |
| TAAAGCTATTAGAGCTTCTT+CGG | 0.429020 | 3.1:-52779106 | MS.gene53862:CDS |
| CAAAGCAAAACTGCTTCTTC+GGG | 0.430445 | 3.1:-52774876 | MS.gene53862:CDS |
| AACGCCCCAAAATCCACTCT+TGG | 0.436480 | 3.1:+52777321 | None:intergenic |
| TAGGACTTCAGATATCATTC+AGG | 0.441846 | 3.1:-52776255 | MS.gene53862:CDS |
| GACAGTCCGACAATTATTAA+GGG | 0.445266 | 3.1:-52776565 | MS.gene53862:CDS |
| TCCTTGCGTTGGCGACATCT+GGG | 0.451239 | 3.1:+52776136 | None:intergenic |
| ACGGTGTAATAATTGGATTA+GGG | 0.453368 | 3.1:+52779184 | None:intergenic |
| ACATCTTCTCTTACTCATAT+CGG | 0.454109 | 3.1:-52776529 | MS.gene53862:CDS |
| TAGAGGAGGGCAATCTCAAA+AGG | 0.454947 | 3.1:-52776588 | MS.gene53862:CDS |
| TCTAATCCCTTAATAATTGT+CGG | 0.472952 | 3.1:+52776559 | None:intergenic |
| AAGAGCATCTCTTCTATAGC+TGG | 0.472982 | 3.1:-52772563 | MS.gene53862:CDS |
| CTCCCCTTTCGCGATTTACA+CGG | 0.478421 | 3.1:+52774777 | None:intergenic |
| ATGTCTTCAGATGCCAATCT+TGG | 0.479100 | 3.1:-52772686 | MS.gene53862:CDS |
| GAACTTTGTAGGACAGAGTC+AGG | 0.482745 | 3.1:-52776201 | MS.gene53862:CDS |
| GTTCTTGCAACGTTGTAGAA+TGG | 0.485883 | 3.1:+52776171 | None:intergenic |
| TTTCCCCTTGATGTTACGCC+AGG | 0.486371 | 3.1:+52777214 | None:intergenic |
| AATATCCTGGCGTAACATCA+AGG | 0.490768 | 3.1:-52777219 | MS.gene53862:CDS |
| ACTCATATCGGTGGCACCAT+TGG | 0.490889 | 3.1:-52776517 | MS.gene53862:CDS |
| ATACCAAATCATCATCATCT+TGG | 0.501866 | 3.1:+52774750 | None:intergenic |
| TCGAGGGGCATAATAGGCAC+TGG | 0.503893 | 3.1:+52772740 | None:intergenic |
| TATTGTGACCTTGTTGTCCC+AGG | 0.505682 | 3.1:+52777238 | None:intergenic |
| CGAGGGGCATAATAGGCACT+GGG | 0.508411 | 3.1:+52772741 | None:intergenic |
| ACGCCCCAAAATCCACTCTT+GGG | 0.513772 | 3.1:+52777322 | None:intergenic |
| CACCATTGGTAAATCTTTGG+AGG | 0.517755 | 3.1:-52776503 | MS.gene53862:intron |
| CCGTCTTCTTCGAGTAATGA+TGG | 0.518729 | 3.1:-52779165 | MS.gene53862:CDS |
| CAGAGAGAGACCTTGGAGGA+TGG | 0.520933 | 3.1:+52779000 | None:intergenic |
| GATGGAGGAGCAGTAGGAGT+AGG | 0.521685 | 3.1:+52779018 | None:intergenic |
| CTGAAATACCTGGGACAACA+AGG | 0.524496 | 3.1:-52777246 | MS.gene53862:CDS |
| TTGGAGGATGGAGGAGCAGT+AGG | 0.525146 | 3.1:+52779012 | None:intergenic |
| TACTGCTCCTCCATCCTCCA+AGG | 0.525395 | 3.1:-52779010 | MS.gene53862:intron |
| TCTAGCTGAGAAAGCTCGCT+TGG | 0.528045 | 3.1:-52772903 | MS.gene53862:CDS |
| CCTCCGTGTAAATCGCGAAA+GGG | 0.528321 | 3.1:-52774780 | MS.gene53862:CDS |
| TTCAGATGCCAATCTTGGCA+TGG | 0.533283 | 3.1:-52772681 | MS.gene53862:CDS |
| TCCCAGATGTCGCCAACGCA+AGG | 0.538434 | 3.1:-52776137 | MS.gene53862:CDS |
| GATTTCGTTGCAGGTTGCAA+TGG | 0.540974 | 3.1:-52774909 | MS.gene53862:intron |
| CATCTCTTCTATAGCTGGAA+AGG | 0.547815 | 3.1:-52772558 | MS.gene53862:CDS |
| AGTTCTTGATCTCCTTGCGT+TGG | 0.549331 | 3.1:+52776125 | None:intergenic |
| CTCTGTCCTACAAAGTTCCC+AGG | 0.551784 | 3.1:+52776206 | None:intergenic |
| ACACCAGAATCTGAAATACC+TGG | 0.553757 | 3.1:-52777256 | MS.gene53862:CDS |
| ATATCATCAACTTACGATGC+AGG | 0.555351 | 3.1:-52772825 | MS.gene53862:CDS |
| TCAGATGCCAATCTTGGCAT+GGG | 0.561084 | 3.1:-52772680 | MS.gene53862:CDS |
| ATATCCTGGCGTAACATCAA+GGG | 0.567253 | 3.1:-52777218 | MS.gene53862:CDS |
| GCGTATAGAAGGAGACAATA+CGG | 0.571739 | 3.1:-52779255 | MS.gene53862:CDS |
| GGCTGATCTGGCATTTGCAA+AGG | 0.572702 | 3.1:-52774837 | MS.gene53862:CDS |
| GAGTTCTGAGGTGATTGTAA+AGG | 0.573419 | 3.1:-52772606 | MS.gene53862:CDS |
| GGCATCTGAAGACATTGATA+GGG | 0.575152 | 3.1:+52772694 | None:intergenic |
| ACAACAAGGTCACAATATCC+TGG | 0.578035 | 3.1:-52777232 | MS.gene53862:CDS |
| CTCGTGAGAATCGCTTTCTG+AGG | 0.578990 | 3.1:-52772859 | MS.gene53862:CDS |
| TGAGAATCGCTTTCTGAGGG+AGG | 0.579459 | 3.1:-52772855 | MS.gene53862:CDS |
| AAAGCAGAGAGAGACCTTGG+AGG | 0.579961 | 3.1:+52778996 | None:intergenic |
| GTTGCAGGTTGCAATGGCAA+TGG | 0.581158 | 3.1:-52774903 | MS.gene53862:intron |
| TTCATCTCCCATATCAGGAA+AGG | 0.581530 | 3.1:-52772636 | MS.gene53862:CDS |
| AGAGGAGGGCAATCTCAAAA+GGG | 0.582424 | 3.1:-52776587 | MS.gene53862:CDS |
| TCGGGAGTTGAAGACTGTCA+AGG | 0.584666 | 3.1:-52774858 | MS.gene53862:CDS |
| GACATCTGGGACCGCAACTG+GGG | 0.584957 | 3.1:+52776149 | None:intergenic |
| TCTTCTATAGCTGGAAAGGA+CGG | 0.587921 | 3.1:-52772554 | MS.gene53862:CDS |
| CTCCGTGTAAATCGCGAAAG+GGG | 0.587932 | 3.1:-52774779 | MS.gene53862:CDS |
| TGAAGACATTGATAGGGATG+TGG | 0.588765 | 3.1:+52772700 | None:intergenic |
| AGACGGAGTATTAGAATCGA+GGG | 0.589106 | 3.1:+52772724 | None:intergenic |
| AGATCAAGAACTTCAGCTGA+AGG | 0.589254 | 3.1:-52776114 | MS.gene53862:CDS |
| GCTTCGTCTTCGAAAAGCGA+AGG | 0.592367 | 3.1:+52779216 | None:intergenic |
| AATTCGAATCACTTAGAGGA+GGG | 0.593525 | 3.1:-52776601 | MS.gene53862:CDS |
| TCCTCCGTGTAAATCGCGAA+AGG | 0.600826 | 3.1:-52774781 | MS.gene53862:CDS |
| TGGCGTAACATCAAGGGGAA+AGG | 0.601994 | 3.1:-52777212 | MS.gene53862:intron |
| TCGTGAGAATCGCTTTCTGA+GGG | 0.604235 | 3.1:-52772858 | MS.gene53862:CDS |
| GAAAGCAAAATCAATCATTG+AGG | 0.606900 | 3.1:-52777290 | MS.gene53862:CDS |
| CACCAGAATCTGAAATACCT+GGG | 0.610375 | 3.1:-52777255 | MS.gene53862:CDS |
| AGAGAGACCTTGGAGGATGG+AGG | 0.612833 | 3.1:+52779003 | None:intergenic |
| AAATTGAATGAGCCCAAGAG+TGG | 0.624865 | 3.1:-52777334 | MS.gene53862:CDS |
| ATTGATAGGGATGTGGCAGA+CGG | 0.626543 | 3.1:+52772707 | None:intergenic |
| GGATCGATGTGCTCAACTAG+AGG | 0.635385 | 3.1:-52774816 | MS.gene53862:CDS |
| CCCTTTCGCGATTTACACGG+AGG | 0.635650 | 3.1:+52774780 | None:intergenic |
| TATCCTGGCGTAACATCAAG+GGG | 0.637290 | 3.1:-52777217 | MS.gene53862:CDS |
| CGTTGCAAGAACCCCAGTTG+CGG | 0.640459 | 3.1:-52776160 | MS.gene53862:CDS |
| AAAGGATATAAAGAGTTCTG+AGG | 0.642104 | 3.1:-52772618 | MS.gene53862:CDS |
| CAGACGGAGTATTAGAATCG+AGG | 0.646425 | 3.1:+52772723 | None:intergenic |
| CACCTCCAAAGATTTACCAA+TGG | 0.660310 | 3.1:+52776501 | None:intergenic |
| GTAGGAGTAGGTTGAGACCG+CGG | 0.663912 | 3.1:+52779030 | None:intergenic |
| AAATTCGAATCACTTAGAGG+AGG | 0.665089 | 3.1:-52776602 | MS.gene53862:CDS |
| TCTTCTCTTACTCATATCGG+TGG | 0.669381 | 3.1:-52776526 | MS.gene53862:CDS |
| ATGGGATCAGAATTAACAAG+AGG | 0.670588 | 3.1:-52772662 | MS.gene53862:CDS |
| CCATCATTACTCGAAGAAGA+CGG | 0.678461 | 3.1:+52779165 | None:intergenic |
| ACTCTAATCTCTCTTCTCCG+CGG | 0.708525 | 3.1:-52779047 | MS.gene53862:CDS |
| GACGGAGTATTAGAATCGAG+GGG | 0.708812 | 3.1:+52772725 | None:intergenic |
| AGGGGCATAATAGGCACTGG+GGG | 0.728448 | 3.1:+52772743 | None:intergenic |
| GTACTTAGACGAGAGCAATG+AGG | 0.740298 | 3.1:-52772795 | MS.gene53862:CDS |
| GAGGGGCATAATAGGCACTG+GGG | 0.777820 | 3.1:+52772742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAACAAAAAAGATA+AGG | + | chr3.1:52774029-52774048 | None:intergenic | 10.0% |
| !!! | ATATATAGTTTTTTTAAAGA+TGG | - | chr3.1:52772975-52772994 | MS.gene53862:intron | 10.0% |
| ! | CCCCCCCCCCCCCCCCCCCC+CGG | - | chr3.1:52773379-52773398 | MS.gene53862:intron | 100.0% |
| ! | CCGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773398-52773417 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773397-52773416 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773379-52773398 | None:intergenic | 100.0% |
| !! | AAGACAAAGAATAAAAATAA+TGG | + | chr3.1:52776232-52776251 | None:intergenic | 15.0% |
| !! | ATAAGTAAAAAACTTATAAG+TGG | + | chr3.1:52775349-52775368 | None:intergenic | 15.0% |
| !! | ATATCAAATAAAAAGAAAGA+AGG | - | chr3.1:52774907-52774926 | MS.gene53862:intron | 15.0% |
| !! | ATCAATAATTAAATAAAGCT+GGG | + | chr3.1:52774125-52774144 | None:intergenic | 15.0% |
| !! | CATTAAAATACAGAAAATTT+AGG | + | chr3.1:52778841-52778860 | None:intergenic | 15.0% |
| !! | TTAGTTAAACACATATTATA+TGG | - | chr3.1:52778497-52778516 | MS.gene53862:intron | 15.0% |
| !!! | AAATGAAATTTTAGATTAAG+GGG | + | chr3.1:52778437-52778456 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAACAAACAACAT+AGG | + | chr3.1:52775816-52775835 | None:intergenic | 15.0% |
| !!! | CAAATGAAATTTTAGATTAA+GGG | + | chr3.1:52778438-52778457 | None:intergenic | 15.0% |
| !!! | CAAATGTTATTTGTAATTTT+AGG | + | chr3.1:52776262-52776281 | None:intergenic | 15.0% |
| !!! | TTTTAAAAACAAACAACATA+GGG | + | chr3.1:52775815-52775834 | None:intergenic | 15.0% |
| !! | AAAAATGGAAAACTATTTAC+GGG | - | chr3.1:52773474-52773493 | MS.gene53862:intron | 20.0% |
| !! | AAACACAGATCTTTAATATA+TGG | + | chr3.1:52776132-52776151 | None:intergenic | 20.0% |
| !! | AAATTAGAGTTGAGAAAAAA+GGG | + | chr3.1:52778593-52778612 | None:intergenic | 20.0% |
| !! | AAGAATTGTGATACTATTAA+AGG | - | chr3.1:52775936-52775955 | MS.gene53862:intron | 20.0% |
| !! | AAGTACTATATATCCAAAAA+AGG | + | chr3.1:52777289-52777308 | None:intergenic | 20.0% |
| !! | AATTGAACTCTGAATATTTA+AGG | + | chr3.1:52777965-52777984 | None:intergenic | 20.0% |
| !! | AGATATTTACAGATGATTAT+AGG | + | chr3.1:52776523-52776542 | None:intergenic | 20.0% |
| !! | ATACATAAAGCAGTAAATTA+TGG | + | chr3.1:52777852-52777871 | None:intergenic | 20.0% |
| !! | ATGATTGTTGTCTATTAAAT+TGG | - | chr3.1:52777541-52777560 | MS.gene53862:intron | 20.0% |
| !! | ATTTGCTTCATAGAATAAAT+CGG | + | chr3.1:52776022-52776041 | None:intergenic | 20.0% |
| !! | CAAAAATAAACTTGGAAAAA+TGG | - | chr3.1:52773459-52773478 | MS.gene53862:intron | 20.0% |
| !! | CATCAATAATTAAATAAAGC+TGG | + | chr3.1:52774102-52774121 | None:intergenic | 20.0% |
| !! | GAAAAATGGAAAACTATTTA+CGG | - | chr3.1:52773473-52773492 | MS.gene53862:intron | 20.0% |
| !! | GAAAACAAGAAAAATGAAAA+TGG | - | chr3.1:52777879-52777898 | MS.gene53862:intron | 20.0% |
| !! | GATATATTGAATGAAAATAG+AGG | + | chr3.1:52776433-52776452 | None:intergenic | 20.0% |
| !! | TTAATATATGGTATTTCAAG+AGG | + | chr3.1:52776120-52776139 | None:intergenic | 20.0% |
| !! | TTGTATAGATTAGAATGTTA+AGG | - | chr3.1:52774830-52774849 | MS.gene53862:CDS | 20.0% |
| !!! | AAAAAAAAATCCCTCTTTTA+AGG | + | chr3.1:52773803-52773822 | None:intergenic | 20.0% |
| !!! | AAAATTTTGGTAACATAATG+TGG | - | chr3.1:52774690-52774709 | MS.gene53862:intron | 20.0% |
| !!! | AATAATTTGGTGTTAGTTTT+AGG | - | chr3.1:52776632-52776651 | MS.gene53862:intron | 20.0% |
| !!! | ACATACTTAAAAGAACTTTT+TGG | + | chr3.1:52773773-52773792 | None:intergenic | 20.0% |
| !!! | AGTTCAATTATTTTAAAGCT+GGG | - | chr3.1:52777976-52777995 | MS.gene53862:intron | 20.0% |
| !!! | ATATATTTTTGCTTTAGATG+AGG | + | chr3.1:52776364-52776383 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTACAACAAATT+TGG | + | chr3.1:52774190-52774209 | None:intergenic | 20.0% |
| !!! | CATTTTTCCAAGTTTATTTT+TGG | + | chr3.1:52773461-52773480 | None:intergenic | 20.0% |
| !!! | CTTTTTCTGCAAAAAAATTT+TGG | - | chr3.1:52774677-52774696 | MS.gene53862:intron | 20.0% |
| !!! | GAATTACAAAATACCTTTTT+TGG | - | chr3.1:52777273-52777292 | MS.gene53862:CDS | 20.0% |
| !!! | GCAAATGAAATTTTAGATTA+AGG | + | chr3.1:52778439-52778458 | None:intergenic | 20.0% |
| !!! | GTCAAAATAACATGATTTTT+TGG | + | chr3.1:52777783-52777802 | None:intergenic | 20.0% |
| !!! | GTTTTAAACATACATCAATA+TGG | + | chr3.1:52776182-52776201 | None:intergenic | 20.0% |
| !!! | GTTTTCTAGATAATATCATA+TGG | - | chr3.1:52778461-52778480 | MS.gene53862:intron | 20.0% |
| !!! | TAATTTTTGACACAAGTAAT+CGG | - | chr3.1:52776386-52776405 | MS.gene53862:intron | 20.0% |
| !!! | TATCAGTTTTAGATTAGAAA+TGG | - | chr3.1:52775019-52775038 | MS.gene53862:intron | 20.0% |
| !!! | TTATTTTTGAACCATGAAAT+TGG | - | chr3.1:52775151-52775170 | MS.gene53862:intron | 20.0% |
| ! | AAAACACATGCAAAAATTTG+AGG | + | chr3.1:52775847-52775866 | None:intergenic | 25.0% |
| ! | AAACTTTATAGTTCCACATT+TGG | + | chr3.1:52778695-52778714 | None:intergenic | 25.0% |
| ! | AACTTTATAGTTCCACATTT+GGG | + | chr3.1:52778694-52778713 | None:intergenic | 25.0% |
| ! | AATATACTATAGCAAGAGAA+AGG | + | chr3.1:52773879-52773898 | None:intergenic | 25.0% |
| ! | ACTCAGAAGTTCAAAATAAT+AGG | + | chr3.1:52775427-52775446 | None:intergenic | 25.0% |
| ! | AGATCTATCTGTTACAATTA+TGG | - | chr3.1:52774227-52774246 | MS.gene53862:intron | 25.0% |
| ! | ATACATATAAAAGGAAGGTA+AGG | - | chr3.1:52774934-52774953 | MS.gene53862:intron | 25.0% |
| ! | ATATTAGCAGAACATCAAAT+GGG | - | chr3.1:52775058-52775077 | MS.gene53862:intron | 25.0% |
| ! | ATGAAGCAAATACATAGATA+TGG | - | chr3.1:52776031-52776050 | MS.gene53862:intron | 25.0% |
| ! | CATATACAATGGGTATATAT+GGG | - | chr3.1:52773640-52773659 | MS.gene53862:intron | 25.0% |
| ! | GAAATTAGAGTTGAGAAAAA+AGG | + | chr3.1:52778594-52778613 | None:intergenic | 25.0% |
| ! | GAAGGAGAAATACATATAAA+AGG | - | chr3.1:52774925-52774944 | MS.gene53862:intron | 25.0% |
| ! | GAGAAATACATATAAAAGGA+AGG | - | chr3.1:52774929-52774948 | MS.gene53862:intron | 25.0% |
| ! | GTTGTCTATTAAATTGGTAT+GGG | - | chr3.1:52777547-52777566 | MS.gene53862:intron | 25.0% |
| ! | TAATCATCTGTAAATATCTG+AGG | - | chr3.1:52776524-52776543 | MS.gene53862:CDS | 25.0% |
| ! | TATATATGGGCAATTCAAAT+CGG | - | chr3.1:52773653-52773672 | MS.gene53862:intron | 25.0% |
| ! | TCTAATCCCTTAATAATTGT+CGG | + | chr3.1:52775249-52775268 | None:intergenic | 25.0% |
| ! | TGTTGTCTATTAAATTGGTA+TGG | - | chr3.1:52777546-52777565 | MS.gene53862:intron | 25.0% |
| ! | TTAAGCGAAAATGATGTATA+TGG | + | chr3.1:52775087-52775106 | None:intergenic | 25.0% |
| ! | TTTATATCCTTTCCTGATAT+GGG | + | chr3.1:52779179-52779198 | None:intergenic | 25.0% |
| !! | AGATATTTTCCTGAAAAAGT+TGG | - | chr3.1:52774805-52774824 | MS.gene53862:CDS | 25.0% |
| !! | ATTATACTGCATTTTTGTGT+TGG | - | chr3.1:52775873-52775892 | MS.gene53862:intron | 25.0% |
| !! | CAAAATAAACCTGTTTCTTA+GGG | + | chr3.1:52776818-52776837 | None:intergenic | 25.0% |
| !! | GAAAAATGAAAATGGCATTT+TGG | - | chr3.1:52777887-52777906 | MS.gene53862:intron | 25.0% |
| !! | GTTTTACAATTGTTGAGAAT+AGG | - | chr3.1:52775531-52775550 | MS.gene53862:intron | 25.0% |
| !! | TAAAGGATCATACCTTTTAT+TGG | - | chr3.1:52773535-52773554 | MS.gene53862:intron | 25.0% |
| !! | TAATTTTGCTAAACATAGTG+CGG | - | chr3.1:52774400-52774419 | MS.gene53862:intron | 25.0% |
| !! | TCAAAATAAACCTGTTTCTT+AGG | + | chr3.1:52776819-52776838 | None:intergenic | 25.0% |
| !! | TCTAATTTTCTGATGACAAA+GGG | - | chr3.1:52776327-52776346 | MS.gene53862:intron | 25.0% |
| !! | TTCTAATCTAAAACTGATAC+TGG | + | chr3.1:52775018-52775037 | None:intergenic | 25.0% |
| !! | TTTCTCTTGCTATAGTATAT+TGG | - | chr3.1:52773878-52773897 | MS.gene53862:intron | 25.0% |
| !! | TTTTACTTATGCAATAGACA+GGG | - | chr3.1:52775359-52775378 | MS.gene53862:intron | 25.0% |
| !! | TTTTTACGGCTCTTATATTT+TGG | - | chr3.1:52776679-52776698 | MS.gene53862:intron | 25.0% |
| !! | TTTTTACTTATGCAATAGAC+AGG | - | chr3.1:52775358-52775377 | MS.gene53862:intron | 25.0% |
| !!! | AATTTTTTTGCAGAAAAAGC+TGG | + | chr3.1:52774676-52774695 | None:intergenic | 25.0% |
| !!! | CAAGTTTATTTTTGGAAACT+CGG | + | chr3.1:52773453-52773472 | None:intergenic | 25.0% |
| !!! | CTATTTCTATACATGGATTT+TGG | - | chr3.1:52778146-52778165 | MS.gene53862:intron | 25.0% |
| !!! | GAGTTCAATTATTTTAAAGC+TGG | - | chr3.1:52777975-52777994 | MS.gene53862:intron | 25.0% |
| !!! | GTTCAATTATTTTAAAGCTG+GGG | - | chr3.1:52777977-52777996 | MS.gene53862:intron | 25.0% |
| !!! | TATACAATTCCAACTTTTTC+AGG | + | chr3.1:52774817-52774836 | None:intergenic | 25.0% |
| !!! | TCATGGTTTTTTTAAGGTAA+CGG | - | chr3.1:52776749-52776768 | MS.gene53862:intron | 25.0% |
| !!! | TCTTTCTCATGGTTTTTTTA+AGG | - | chr3.1:52776743-52776762 | MS.gene53862:intron | 25.0% |
| !!! | TTTTTGAAAACAACACAATG+TGG | + | chr3.1:52778784-52778803 | None:intergenic | 25.0% |
| AAAACCAAATGTCAAAGAGT+TGG | - | chr3.1:52777673-52777692 | MS.gene53862:intron | 30.0% | |
| AAAGGATATAAAGAGTTCTG+AGG | - | chr3.1:52779187-52779206 | MS.gene53862:CDS | 30.0% | |
| AAGTCCAATAGAAATGATGT+TGG | - | chr3.1:52778107-52778126 | MS.gene53862:intron | 30.0% | |
| AATAGAGGTTAACATAGGAA+GGG | + | chr3.1:52778557-52778576 | None:intergenic | 30.0% | |
| ACATCTTCTCTTACTCATAT+CGG | - | chr3.1:52775276-52775295 | MS.gene53862:intron | 30.0% | |
| ACGGTGTAATAATTGGATTA+GGG | + | chr3.1:52772624-52772643 | None:intergenic | 30.0% | |
| AGAGAAGTCAACAAACAAAA+AGG | + | chr3.1:52777085-52777104 | None:intergenic | 30.0% | |
| AGATTGAACTAGTGATTAGA+AGG | + | chr3.1:52776479-52776498 | None:intergenic | 30.0% | |
| AGTACAAAATATTGGGAGTT+TGG | + | chr3.1:52777316-52777335 | None:intergenic | 30.0% | |
| AGTTGAAGAGATAGAGAAAT+TGG | - | chr3.1:52773040-52773059 | MS.gene53862:intron | 30.0% | |
| ATACCAAATCATCATCATCT+TGG | + | chr3.1:52777058-52777077 | None:intergenic | 30.0% | |
| ATGTATAGATGCCTTAAAAG+AGG | - | chr3.1:52773789-52773808 | MS.gene53862:intron | 30.0% | |
| CAAACAATAGAGGTTAACAT+AGG | + | chr3.1:52778562-52778581 | None:intergenic | 30.0% | |
| CATGAATCATTCCTATATTG+AGG | + | chr3.1:52775995-52776014 | None:intergenic | 30.0% | |
| CGAGTTTCCAAAAATAAACT+TGG | - | chr3.1:52773451-52773470 | MS.gene53862:intron | 30.0% | |
| CGATAGTTGTTTATATCACA+GGG | + | chr3.1:52777199-52777218 | None:intergenic | 30.0% | |
| CTCAATATAGGAATGATTCA+TGG | - | chr3.1:52775993-52776012 | MS.gene53862:intron | 30.0% | |
| CTTATACAGAGCTAATACAA+AGG | + | chr3.1:52778276-52778295 | None:intergenic | 30.0% | |
| CTTCACGAGTACAAAATATT+GGG | + | chr3.1:52777323-52777342 | None:intergenic | 30.0% | |
| CTTTATATCCTTTCCTGATA+TGG | + | chr3.1:52779180-52779199 | None:intergenic | 30.0% | |
| GAAAGCAAAATCAATCATTG+AGG | - | chr3.1:52774515-52774534 | MS.gene53862:intron | 30.0% | |
| GAGTGATGGTACTAATAATT+TGG | - | chr3.1:52776619-52776638 | MS.gene53862:intron | 30.0% | |
| GATATTAGCAGAACATCAAA+TGG | - | chr3.1:52775057-52775076 | MS.gene53862:intron | 30.0% | |
| GATGGAAGAAAATTAGTTAG+AGG | - | chr3.1:52772993-52773012 | MS.gene53862:intron | 30.0% | |
| GCATATACAATGGGTATATA+TGG | - | chr3.1:52773639-52773658 | MS.gene53862:intron | 30.0% | |
| TAAAGCTATTAGAGCTTCTT+CGG | - | chr3.1:52772699-52772718 | MS.gene53862:CDS | 30.0% | |
| TATAAAAGGAAGGTAAGGAA+AGG | - | chr3.1:52774939-52774958 | MS.gene53862:intron | 30.0% | |
| TATTAGCAGAACATCAAATG+GGG | - | chr3.1:52775059-52775078 | MS.gene53862:intron | 30.0% | |
| TCCAAAAGACTAGATGTATT+TGG | - | chr3.1:52778528-52778547 | MS.gene53862:intron | 30.0% | |
| TCTTACTACTCAAAGAGAAT+AGG | + | chr3.1:52777641-52777660 | None:intergenic | 30.0% | |
| TGTATAGATGCCTTAAAAGA+GGG | - | chr3.1:52773790-52773809 | MS.gene53862:intron | 30.0% | |
| TTCTTGTTGCATGAATTCTT+TGG | - | chr3.1:52774047-52774066 | MS.gene53862:intron | 30.0% | |
| ! | ATATTTAAGGCCTATTTGGT+TGG | + | chr3.1:52777952-52777971 | None:intergenic | 30.0% |
| ! | CATTACAACAAATTTGGAAC+TGG | + | chr3.1:52774184-52774203 | None:intergenic | 30.0% |
| ! | CTCTAATTTTCTGATGACAA+AGG | - | chr3.1:52776326-52776345 | MS.gene53862:intron | 30.0% |
| ! | CTGAATATTTAAGGCCTATT+TGG | + | chr3.1:52777956-52777975 | None:intergenic | 30.0% |
| ! | CTTTTTCCTGATATGTTTAC+GGG | + | chr3.1:52775579-52775598 | None:intergenic | 30.0% |
| ! | GTCACAGTTTAAAGTATTCT+TGG | - | chr3.1:52777512-52777531 | MS.gene53862:intron | 30.0% |
| ! | TATGCAGTGCATTTGTTAAA+GGG | + | chr3.1:52773510-52773529 | None:intergenic | 30.0% |
| ! | TCATTTTCTTGTCTTTCTCA+TGG | - | chr3.1:52776732-52776751 | MS.gene53862:intron | 30.0% |
| ! | TTTGGTAGTTAGTGAAAACA+AGG | - | chr3.1:52777905-52777924 | MS.gene53862:intron | 30.0% |
| !! | GCTTTTTCCTGATATGTTTA+CGG | + | chr3.1:52775580-52775599 | None:intergenic | 30.0% |
| !! | GGTCAAACTATTTCTATACA+TGG | - | chr3.1:52778139-52778158 | MS.gene53862:intron | 30.0% |
| !! | GTCAATTGATTTGGTTATTC+AGG | - | chr3.1:52778752-52778771 | MS.gene53862:intron | 30.0% |
| !! | TCCAAATACATCTAGTCTTT+TGG | + | chr3.1:52778532-52778551 | None:intergenic | 30.0% |
| !!! | CTGTGTATCACTTTTTAATG+TGG | - | chr3.1:52775737-52775756 | MS.gene53862:intron | 30.0% |
| !!! | TCACTCTCACTCTTTTTTTA+CGG | - | chr3.1:52776665-52776684 | MS.gene53862:intron | 30.0% |
| !!! | TTCAAGAGGTACTTATGTTT+TGG | + | chr3.1:52776106-52776125 | None:intergenic | 30.0% |
| AAACATAAAATGTTGGCACC+TGG | + | chr3.1:52773320-52773339 | None:intergenic | 35.0% | |
| AAACATATCAGGAAAAAGCC+TGG | - | chr3.1:52775581-52775600 | MS.gene53862:intron | 35.0% | |
| AAAGCATATCCTTATGGAAG+AGG | + | chr3.1:52775471-52775490 | None:intergenic | 35.0% | |
| AAATGTCAAAGAGTTGGATG+GGG | - | chr3.1:52777679-52777698 | MS.gene53862:intron | 35.0% | |
| AAATTCGAATCACTTAGAGG+AGG | - | chr3.1:52775203-52775222 | MS.gene53862:intron | 35.0% | |
| AACATAAAATGTTGGCACCT+GGG | + | chr3.1:52773319-52773338 | None:intergenic | 35.0% | |
| AACATATCAGGAAAAAGCCT+GGG | - | chr3.1:52775582-52775601 | MS.gene53862:intron | 35.0% | |
| AAGCATATCCTTATGGAAGA+GGG | + | chr3.1:52775470-52775489 | None:intergenic | 35.0% | |
| AATGTGTTGTCAAACCAAAG+AGG | + | chr3.1:52777719-52777738 | None:intergenic | 35.0% | |
| AATTCGAATCACTTAGAGGA+GGG | - | chr3.1:52775204-52775223 | MS.gene53862:intron | 35.0% | |
| ACATTGCTTTGCTCATATGA+AGG | + | chr3.1:52773957-52773976 | None:intergenic | 35.0% | |
| ACTTCAACACTGTAACTTCT+AGG | + | chr3.1:52773826-52773845 | None:intergenic | 35.0% | |
| AGAGTCGTAAATAATTGTGC+TGG | + | chr3.1:52776310-52776329 | None:intergenic | 35.0% | |
| AGTGCGGTGTTTGTAAATAT+AGG | - | chr3.1:52774416-52774435 | MS.gene53862:intron | 35.0% | |
| ATATCATCAACTTACGATGC+AGG | - | chr3.1:52778980-52778999 | MS.gene53862:intron | 35.0% | |
| ATCAATGAATCCTATCTCTG+AGG | + | chr3.1:52774645-52774664 | None:intergenic | 35.0% | |
| ATGGCCAACATCATTTCTAT+TGG | + | chr3.1:52778114-52778133 | None:intergenic | 35.0% | |
| ATGGGATCAGAATTAACAAG+AGG | - | chr3.1:52779143-52779162 | MS.gene53862:CDS | 35.0% | |
| ATTAGCAGAACATCAAATGG+GGG | - | chr3.1:52775060-52775079 | MS.gene53862:intron | 35.0% | |
| CAAATGTCAAAGAGTTGGAT+GGG | - | chr3.1:52777678-52777697 | MS.gene53862:intron | 35.0% | |
| CAATAGAGGTTAACATAGGA+AGG | + | chr3.1:52778558-52778577 | None:intergenic | 35.0% | |
| CCAAAATTCGAATCACTTAG+AGG | - | chr3.1:52775200-52775219 | MS.gene53862:intron | 35.0% | |
| CCTTCACGAGTACAAAATAT+TGG | + | chr3.1:52777324-52777343 | None:intergenic | 35.0% | |
| CTCAAAGACTACCTAATATG+GGG | + | chr3.1:52773423-52773442 | None:intergenic | 35.0% | |
| GAAACAGAGAAGCCAATTTA+GGG | + | chr3.1:52778013-52778032 | None:intergenic | 35.0% | |
| GAAATAGTTTGACCATCTCA+TGG | + | chr3.1:52778133-52778152 | None:intergenic | 35.0% | |
| GAAGAAGACGGTGTAATAAT+TGG | + | chr3.1:52772631-52772650 | None:intergenic | 35.0% | |
| GACAGTCCGACAATTATTAA+GGG | - | chr3.1:52775240-52775259 | MS.gene53862:intron | 35.0% | |
| GACGGTGTAATAATTGGATT+AGG | + | chr3.1:52772625-52772644 | None:intergenic | 35.0% | |
| GAGTCGTAAATAATTGTGCT+GGG | + | chr3.1:52776309-52776328 | None:intergenic | 35.0% | |
| GATCACAAAGCATATCCTTA+TGG | + | chr3.1:52775477-52775496 | None:intergenic | 35.0% | |
| GATCTGTGTTTGTTTGTACA+CGG | - | chr3.1:52776141-52776160 | MS.gene53862:CDS | 35.0% | |
| GCGATAGTTGTTTATATCAC+AGG | + | chr3.1:52777200-52777219 | None:intergenic | 35.0% | |
| GCTCAAAGACTACCTAATAT+GGG | + | chr3.1:52773424-52773443 | None:intergenic | 35.0% | |
| GGAGTAAGTACAAACAATAG+AGG | + | chr3.1:52778572-52778591 | None:intergenic | 35.0% | |
| GGCAACAATATGCCAATAAA+AGG | + | chr3.1:52773550-52773569 | None:intergenic | 35.0% | |
| GGTTTGACTATACCCTAAAT+TGG | - | chr3.1:52777998-52778017 | MS.gene53862:intron | 35.0% | |
| GTAAAAAAAGAGTGAGAGTG+AGG | + | chr3.1:52776666-52776685 | None:intergenic | 35.0% | |
| GTCTATTAAATTGGTATGGG+TGG | - | chr3.1:52777550-52777569 | MS.gene53862:intron | 35.0% | |
| TAGGACTTCAGATATCATTC+AGG | - | chr3.1:52775550-52775569 | MS.gene53862:intron | 35.0% | |
| TCAAAGACTACCTAATATGG+GGG | + | chr3.1:52773422-52773441 | None:intergenic | 35.0% | |
| TCAAATCGGCATCAACTTTA+AGG | - | chr3.1:52773667-52773686 | MS.gene53862:intron | 35.0% | |
| TCACAAACTTCAGAGAATCA+TGG | + | chr3.1:52778238-52778257 | None:intergenic | 35.0% | |
| TCTATCAAAGGCCTCAATAT+AGG | - | chr3.1:52775981-52776000 | MS.gene53862:intron | 35.0% | |
| TCTATCTCACGAAAAGACAA+GGG | + | chr3.1:52777126-52777145 | None:intergenic | 35.0% | |
| TCTTTACGAGTGTCTTCAAA+GGG | + | chr3.1:52778657-52778676 | None:intergenic | 35.0% | |
| TGAAACAGAGAAGCCAATTT+AGG | + | chr3.1:52778014-52778033 | None:intergenic | 35.0% | |
| TGAGCTAAGAGAAAAAGAGT+TGG | - | chr3.1:52773150-52773169 | MS.gene53862:intron | 35.0% | |
| TGAGTGTGTTTGTCTATCAA+AGG | - | chr3.1:52775969-52775988 | MS.gene53862:intron | 35.0% | |
| TGTTTGTTTGTACACGGATA+TGG | - | chr3.1:52776147-52776166 | MS.gene53862:CDS | 35.0% | |
| TTAACAAATGCACTGCATAC+TGG | - | chr3.1:52773511-52773530 | MS.gene53862:intron | 35.0% | |
| TTAGAAGGTCAATAGATAGC+TGG | + | chr3.1:52776464-52776483 | None:intergenic | 35.0% | |
| TTAGCGAAAACCTATGAGTT+TGG | - | chr3.1:52773693-52773712 | MS.gene53862:intron | 35.0% | |
| TTAGGTGAAATGAGTAGTGT+TGG | + | chr3.1:52778823-52778842 | None:intergenic | 35.0% | |
| TTATGGGAATGTGTTACAGT+AGG | - | chr3.1:52775388-52775407 | MS.gene53862:intron | 35.0% | |
| TTCTATCTCACGAAAAGACA+AGG | + | chr3.1:52777127-52777146 | None:intergenic | 35.0% | |
| TTCTTTACGAGTGTCTTCAA+AGG | + | chr3.1:52778658-52778677 | None:intergenic | 35.0% | |
| TTTCGTGAGATAGAAGTTGA+TGG | - | chr3.1:52777132-52777151 | MS.gene53862:intron | 35.0% | |
| ! | AATTTGGAACTGGAGTTGTA+TGG | + | chr3.1:52774174-52774193 | None:intergenic | 35.0% |
| ! | AGGTGCCAACATTTTATGTT+TGG | - | chr3.1:52773319-52773338 | MS.gene53862:intron | 35.0% |
| ! | ATGAAGGTCTTCTAAGGATT+TGG | + | chr3.1:52773941-52773960 | None:intergenic | 35.0% |
| ! | ATTTGGAACTGGAGTTGTAT+GGG | + | chr3.1:52774173-52774192 | None:intergenic | 35.0% |
| ! | CCAATATTTTGTACTCGTGA+AGG | - | chr3.1:52777321-52777340 | MS.gene53862:CDS | 35.0% |
| ! | CCTCTAAGTGATTCGAATTT+TGG | + | chr3.1:52775203-52775222 | None:intergenic | 35.0% |
| ! | GGTGCCAACATTTTATGTTT+GGG | - | chr3.1:52773320-52773339 | MS.gene53862:intron | 35.0% |
| ! | GTATGCAGTGCATTTGTTAA+AGG | + | chr3.1:52773511-52773530 | None:intergenic | 35.0% |
| ! | TAGCCAAGATGATGATGATT+TGG | - | chr3.1:52777052-52777071 | MS.gene53862:intron | 35.0% |
| !! | AGAGGAAAGAAGCATCATTT+AGG | + | chr3.1:52776415-52776434 | None:intergenic | 35.0% |
| !! | ATTTTTGGAAACTCGGTATC+TGG | + | chr3.1:52773446-52773465 | None:intergenic | 35.0% |
| !! | TCAAAGGTACTCAATTGCAA+GGG | - | chr3.1:52773106-52773125 | MS.gene53862:intron | 35.0% |
| !! | TCTCTACAAACCTTTTGGTT+TGG | - | chr3.1:52773347-52773366 | MS.gene53862:intron | 35.0% |
| !!! | TTGAAGCATTTTTTGCCATC+TGG | - | chr3.1:52776874-52776893 | MS.gene53862:intron | 35.0% |
| AAAAAAGCAGAGAGAGACCT+TGG | + | chr3.1:52772815-52772834 | None:intergenic | 40.0% | |
| AAAAAGCCTGGGAACTTTGT+AGG | - | chr3.1:52775593-52775612 | MS.gene53862:intron | 40.0% | |
| AAAGTGTACTGTGCAAAGGT+GGG | - | chr3.1:52778193-52778212 | MS.gene53862:intron | 40.0% | |
| AAATGATGTTGGCCATGAGA+TGG | - | chr3.1:52778118-52778137 | MS.gene53862:intron | 40.0% | |
| AAATTGAATGAGCCCAAGAG+TGG | - | chr3.1:52774471-52774490 | MS.gene53862:intron | 40.0% | |
| AACGCCGAATTATAAACCAG+AGG | + | chr3.1:52778730-52778749 | None:intergenic | 40.0% | |
| AAGTTGCAGTCGTATCTGTA+AGG | + | chr3.1:52778874-52778893 | None:intergenic | 40.0% | |
| AATAGACAGGGATGGGATTA+TGG | - | chr3.1:52775371-52775390 | MS.gene53862:intron | 40.0% | |
| AATATCCTGGCGTAACATCA+AGG | - | chr3.1:52774586-52774605 | MS.gene53862:intron | 40.0% | |
| AATCTACTTCAAGCCCCATA+TGG | - | chr3.1:52777361-52777380 | MS.gene53862:CDS | 40.0% | |
| ACAACAAGGTCACAATATCC+TGG | - | chr3.1:52774573-52774592 | MS.gene53862:intron | 40.0% | |
| ACAACCTAAAGCTATTGCTG+AGG | - | chr3.1:52774254-52774273 | MS.gene53862:intron | 40.0% | |
| ACATAAAATGTTGGCACCTG+GGG | + | chr3.1:52773318-52773337 | None:intergenic | 40.0% | |
| ACCAAAAGGTTTGTAGAGAC+TGG | + | chr3.1:52773346-52773365 | None:intergenic | 40.0% | |
| ACCACAGCAAAAGTAATCGA+TGG | + | chr3.1:52777250-52777269 | None:intergenic | 40.0% | |
| ACCCATTGTATATGCTACAC+AGG | + | chr3.1:52773634-52773653 | None:intergenic | 40.0% | |
| ACTTATGCAATAGACAGGGA+TGG | - | chr3.1:52775363-52775382 | MS.gene53862:intron | 40.0% | |
| AGAAAAAGAGTTGGAGGTTC+TGG | - | chr3.1:52773159-52773178 | MS.gene53862:intron | 40.0% | |
| AGAAGCTAGTCCAAACTCAT+AGG | + | chr3.1:52773706-52773725 | None:intergenic | 40.0% | |
| AGATCAAGAACTTCAGCTGA+AGG | - | chr3.1:52775691-52775710 | MS.gene53862:intron | 40.0% | |
| AGATGGACCTAGGAAAACTA+TGG | + | chr3.1:52776569-52776588 | None:intergenic | 40.0% | |
| AGCTTCTTCTCCAACCAAAT+AGG | - | chr3.1:52777939-52777958 | MS.gene53862:intron | 40.0% | |
| AGGAAACCCGTAAACATATC+AGG | - | chr3.1:52775570-52775589 | MS.gene53862:intron | 40.0% | |
| AGTACACGTGTGGTTAAGTA+CGG | - | chr3.1:52775764-52775783 | MS.gene53862:intron | 40.0% | |
| AGTTGCAGTCGTATCTGTAA+GGG | + | chr3.1:52778873-52778892 | None:intergenic | 40.0% | |
| ATAGACAGGGATGGGATTAT+GGG | - | chr3.1:52775372-52775391 | MS.gene53862:intron | 40.0% | |
| ATATCCTGGCGTAACATCAA+GGG | - | chr3.1:52774587-52774606 | MS.gene53862:intron | 40.0% | |
| ATGTCTTCAGATGCCAATCT+TGG | - | chr3.1:52779119-52779138 | MS.gene53862:CDS | 40.0% | |
| CAAAGCAAAACTGCTTCTTC+GGG | - | chr3.1:52776929-52776948 | MS.gene53862:intron | 40.0% | |
| CAAGAAGCTTTACCCAAATG+TGG | - | chr3.1:52778679-52778698 | MS.gene53862:intron | 40.0% | |
| CACATTTGGGTAAAGCTTCT+TGG | + | chr3.1:52778681-52778700 | None:intergenic | 40.0% | |
| CACCATTGGTAAATCTTTGG+AGG | - | chr3.1:52775302-52775321 | MS.gene53862:intron | 40.0% | |
| CACCTCCAAAGATTTACCAA+TGG | + | chr3.1:52775307-52775326 | None:intergenic | 40.0% | |
| CATCTCTTCTATAGCTGGAA+AGG | - | chr3.1:52779247-52779266 | MS.gene53862:CDS | 40.0% | |
| CCAAAGCAAAACTGCTTCTT+CGG | - | chr3.1:52776928-52776947 | MS.gene53862:intron | 40.0% | |
| CCAAATGTCAAAGAGTTGGA+TGG | - | chr3.1:52777677-52777696 | MS.gene53862:intron | 40.0% | |
| CCATCATTACTCGAAGAAGA+CGG | + | chr3.1:52772643-52772662 | None:intergenic | 40.0% | |
| CCATCCAACTCTTTGACATT+TGG | + | chr3.1:52777680-52777699 | None:intergenic | 40.0% | |
| CCCATTGTATATGCTACACA+GGG | + | chr3.1:52773633-52773652 | None:intergenic | 40.0% | |
| CCCTGTGTAGCATATACAAT+GGG | - | chr3.1:52773630-52773649 | MS.gene53862:intron | 40.0% | |
| CCGAATTATAAACCAGAGGT+GGG | + | chr3.1:52778726-52778745 | None:intergenic | 40.0% | |
| CGGCGTTAAGTCAATTGATT+TGG | - | chr3.1:52778743-52778762 | MS.gene53862:intron | 40.0% | |
| CGTTGACACTTCTTCAACTT+CGG | - | chr3.1:52772663-52772682 | MS.gene53862:CDS | 40.0% | |
| CTAAGGATTTGGAGGCAATA+GGG | + | chr3.1:52773930-52773949 | None:intergenic | 40.0% | |
| CTGGCCCAAACATAAAATGT+TGG | + | chr3.1:52773327-52773346 | None:intergenic | 40.0% | |
| CTTATGCAATAGACAGGGAT+GGG | - | chr3.1:52775364-52775383 | MS.gene53862:intron | 40.0% | |
| CTTTACGAGTGTCTTCAAAG+GGG | + | chr3.1:52778656-52778675 | None:intergenic | 40.0% | |
| CTTTGACACAGAGAGAAACA+GGG | + | chr3.1:52773092-52773111 | None:intergenic | 40.0% | |
| GAAAAAGAGTTGGAGGTTCT+GGG | - | chr3.1:52773160-52773179 | MS.gene53862:intron | 40.0% | |
| GAAGATTCGAAATGCATGTG+TGG | - | chr3.1:52774292-52774311 | MS.gene53862:intron | 40.0% | |
| GACACTAGCATCCAATTTCA+TGG | + | chr3.1:52775165-52775184 | None:intergenic | 40.0% | |
| GCAATTGAAGCCAAACCAAA+AGG | + | chr3.1:52773360-52773379 | None:intergenic | 40.0% | |
| GCATAAAGTGTACTGTGCAA+AGG | - | chr3.1:52778189-52778208 | MS.gene53862:intron | 40.0% | |
| GCGTATAGAAGGAGACAATA+CGG | - | chr3.1:52772550-52772569 | MS.gene53862:CDS | 40.0% | |
| GCTAAGAGAAAAAGAGTTGG+AGG | - | chr3.1:52773153-52773172 | MS.gene53862:intron | 40.0% | |
| GCTCATATGAAGGTCTTCTA+AGG | + | chr3.1:52773947-52773966 | None:intergenic | 40.0% | |
| GGACAGTCCGACAATTATTA+AGG | - | chr3.1:52775239-52775258 | MS.gene53862:intron | 40.0% | |
| GGCATCTGAAGACATTGATA+GGG | + | chr3.1:52779114-52779133 | None:intergenic | 40.0% | |
| GGCTCAAAGACTACCTAATA+TGG | + | chr3.1:52773425-52773444 | None:intergenic | 40.0% | |
| GTTCTTGCAACGTTGTAGAA+TGG | + | chr3.1:52775637-52775656 | None:intergenic | 40.0% | |
| GTTTCATGTTCAATTACCCC+AGG | - | chr3.1:52773299-52773318 | MS.gene53862:intron | 40.0% | |
| TAAAGTGTACTGTGCAAAGG+TGG | - | chr3.1:52778192-52778211 | MS.gene53862:intron | 40.0% | |
| TAAATTGGTATGGGTGGAGA+GGG | - | chr3.1:52777556-52777575 | MS.gene53862:intron | 40.0% | |
| TATCCTTATGGAAGAGGGAA+AGG | + | chr3.1:52775465-52775484 | None:intergenic | 40.0% | |
| TATTTAATGCTACCCCTGCA+GGG | - | chr3.1:52777408-52777427 | MS.gene53862:intron | 40.0% | |
| TCTAAGGATTTGGAGGCAAT+AGG | + | chr3.1:52773931-52773950 | None:intergenic | 40.0% | |
| TCTTCTATAGCTGGAAAGGA+CGG | - | chr3.1:52779251-52779270 | MS.gene53862:CDS | 40.0% | |
| TCTTCTCTTACTCATATCGG+TGG | - | chr3.1:52775279-52775298 | MS.gene53862:intron | 40.0% | |
| TGAAGACATTGATAGGGATG+TGG | + | chr3.1:52779108-52779127 | None:intergenic | 40.0% | |
| TGGCACCATTGGTAAATCTT+TGG | - | chr3.1:52775299-52775318 | MS.gene53862:intron | 40.0% | |
| TGGCATCTGAAGACATTGAT+AGG | + | chr3.1:52779115-52779134 | None:intergenic | 40.0% | |
| TGGTAACATAATGTGGTCGT+GGG | - | chr3.1:52774697-52774716 | MS.gene53862:intron | 40.0% | |
| TTAAATTGGTATGGGTGGAG+AGG | - | chr3.1:52777555-52777574 | MS.gene53862:intron | 40.0% | |
| TTAGCAGAACATCAAATGGG+GGG | - | chr3.1:52775061-52775080 | MS.gene53862:intron | 40.0% | |
| TTCATCTCCCATATCAGGAA+AGG | - | chr3.1:52779169-52779188 | MS.gene53862:CDS | 40.0% | |
| TTGGATGGGGCTGTAATATA+GGG | - | chr3.1:52777692-52777711 | MS.gene53862:intron | 40.0% | |
| TTTGACACAGAGAGAAACAG+GGG | + | chr3.1:52773091-52773110 | None:intergenic | 40.0% | |
| ! | AAGGTCTTCTAAGGATTTGG+AGG | + | chr3.1:52773938-52773957 | None:intergenic | 40.0% |
| ! | ACACCAGAATCTGAAATACC+TGG | - | chr3.1:52774549-52774568 | MS.gene53862:intron | 40.0% |
| ! | AGACGGAGTATTAGAATCGA+GGG | + | chr3.1:52779084-52779103 | None:intergenic | 40.0% |
| ! | ATGCACTGCATACTGGTTAA+AGG | - | chr3.1:52773518-52773537 | MS.gene53862:intron | 40.0% |
| ! | ATGTGGTAAAAGTACACGTG+TGG | - | chr3.1:52775754-52775773 | MS.gene53862:intron | 40.0% |
| ! | CACCAGAATCTGAAATACCT+GGG | - | chr3.1:52774550-52774569 | MS.gene53862:intron | 40.0% |
| ! | CCCACCTCTGGTTTATAATT+CGG | - | chr3.1:52778723-52778742 | MS.gene53862:intron | 40.0% |
| ! | GTTTTCCTAGGTCCATCTTA+CGG | - | chr3.1:52776571-52776590 | MS.gene53862:CDS | 40.0% |
| ! | TACCATCACTCTTGTTTCAG+CGG | + | chr3.1:52776610-52776629 | None:intergenic | 40.0% |
| ! | TGATGTTGCCTGCTTCTTTT+CGG | - | chr3.1:52777472-52777491 | MS.gene53862:intron | 40.0% |
| ! | TGTCTGTGACTATTTCTCTG+AGG | - | chr3.1:52774000-52774019 | MS.gene53862:intron | 40.0% |
| ! | TTAGAATCGAGGGGCATAAT+AGG | + | chr3.1:52779074-52779093 | None:intergenic | 40.0% |
| ! | TTGGTAACATAATGTGGTCG+TGG | - | chr3.1:52774696-52774715 | MS.gene53862:intron | 40.0% |
| !! | AAAGGTACTCAATTGCAAGG+GGG | - | chr3.1:52773108-52773127 | MS.gene53862:intron | 40.0% |
| !! | AAGAGCATCTCTTCTATAGC+TGG | - | chr3.1:52779242-52779261 | MS.gene53862:CDS | 40.0% |
| !! | ACCATCGATTACTTTTGCTG+TGG | - | chr3.1:52777246-52777265 | MS.gene53862:CDS | 40.0% |
| !! | CAAAGGTACTCAATTGCAAG+GGG | - | chr3.1:52773107-52773126 | MS.gene53862:intron | 40.0% |
| !! | GAGTTCTGAGGTGATTGTAA+AGG | - | chr3.1:52779199-52779218 | MS.gene53862:CDS | 40.0% |
| !! | GTCAAAGGTACTCAATTGCA+AGG | - | chr3.1:52773105-52773124 | MS.gene53862:intron | 40.0% |
| !! | TGGACTAGCTTCTAGTTGAT+GGG | - | chr3.1:52773713-52773732 | MS.gene53862:intron | 40.0% |
| !! | TTGGACTAGCTTCTAGTTGA+TGG | - | chr3.1:52773712-52773731 | MS.gene53862:intron | 40.0% |
| AAAAAGAGTGAGAGTGAGGC+TGG | + | chr3.1:52776662-52776681 | None:intergenic | 45.0% | |
| AACCTGCAACGAAATCCAGA+TGG | + | chr3.1:52776892-52776911 | None:intergenic | 45.0% | |
| ACAAACCTTGCAAAGCCAGA+GGG | + | chr3.1:52773606-52773625 | None:intergenic | 45.0% | |
| ACACAAGACTCCCACCATAT+GGG | + | chr3.1:52777378-52777397 | None:intergenic | 45.0% | |
| ACTCTAATCTCTCTTCTCCG+CGG | - | chr3.1:52772758-52772777 | MS.gene53862:CDS | 45.0% | |
| AGAGACAACCGAAAAGAAGC+AGG | + | chr3.1:52777483-52777502 | None:intergenic | 45.0% | |
| AGAGGAGGGCAATCTCAAAA+GGG | - | chr3.1:52775218-52775237 | MS.gene53862:intron | 45.0% | |
| AGTTCTTGATCTCCTTGCGT+TGG | + | chr3.1:52775683-52775702 | None:intergenic | 45.0% | |
| ATTGATAGGGATGTGGCAGA+CGG | + | chr3.1:52779101-52779120 | None:intergenic | 45.0% | |
| ATTTAATGCTACCCCTGCAG+GGG | - | chr3.1:52777409-52777428 | MS.gene53862:intron | 45.0% | |
| CAAAATCTTTAGCGCGAAGC+TGG | - | chr3.1:52773243-52773262 | MS.gene53862:intron | 45.0% | |
| CAGACTTCATGTCCGTAAGA+TGG | + | chr3.1:52776586-52776605 | None:intergenic | 45.0% | |
| CCGTCTTCTTCGAGTAATGA+TGG | - | chr3.1:52772640-52772659 | MS.gene53862:CDS | 45.0% | |
| CCTGCAAACACGAATTGCAT+GGG | + | chr3.1:52775508-52775527 | None:intergenic | 45.0% | |
| CCTTTGACACAGAGAGAAAC+AGG | + | chr3.1:52773093-52773112 | None:intergenic | 45.0% | |
| CTGAAATACCTGGGACAACA+AGG | - | chr3.1:52774559-52774578 | MS.gene53862:intron | 45.0% | |
| CTGTAATATAGGGGCCTCTT+TGG | - | chr3.1:52777702-52777721 | MS.gene53862:intron | 45.0% | |
| GAACTTTGTAGGACAGAGTC+AGG | - | chr3.1:52775604-52775623 | MS.gene53862:intron | 45.0% | |
| GATTTCGTTGCAGGTTGCAA+TGG | - | chr3.1:52776896-52776915 | MS.gene53862:intron | 45.0% | |
| GCCCTGTGTAGCATATACAA+TGG | - | chr3.1:52773629-52773648 | MS.gene53862:intron | 45.0% | |
| GCCGAATTATAAACCAGAGG+TGG | + | chr3.1:52778727-52778746 | None:intergenic | 45.0% | |
| GGCATTTCATCTCCCATATC+AGG | - | chr3.1:52779164-52779183 | MS.gene53862:CDS | 45.0% | |
| GTACTTAGACGAGAGCAATG+AGG | - | chr3.1:52779010-52779029 | MS.gene53862:intron | 45.0% | |
| GTATTTAATGCTACCCCTGC+AGG | - | chr3.1:52777407-52777426 | MS.gene53862:intron | 45.0% | |
| GTCCCAGGTATTTCAGATTC+TGG | + | chr3.1:52774555-52774574 | None:intergenic | 45.0% | |
| GTGACCTCAGCAATAGCTTT+AGG | + | chr3.1:52774261-52774280 | None:intergenic | 45.0% | |
| GTTGGATGGGGCTGTAATAT+AGG | - | chr3.1:52777691-52777710 | MS.gene53862:intron | 45.0% | |
| TACACAAGACTCCCACCATA+TGG | + | chr3.1:52777379-52777398 | None:intergenic | 45.0% | |
| TACTCAATTGCAAGGGGGTT+GGG | - | chr3.1:52773113-52773132 | MS.gene53862:intron | 45.0% | |
| TACTTCAAGCCCCATATGGT+GGG | - | chr3.1:52777365-52777384 | MS.gene53862:CDS | 45.0% | |
| TAGAGGAGGGCAATCTCAAA+AGG | - | chr3.1:52775217-52775236 | MS.gene53862:intron | 45.0% | |
| TATCCTGGCGTAACATCAAG+GGG | - | chr3.1:52774588-52774607 | MS.gene53862:intron | 45.0% | |
| TCAGATGCCAATCTTGGCAT+GGG | - | chr3.1:52779125-52779144 | MS.gene53862:CDS | 45.0% | |
| TCCTGCAAACACGAATTGCA+TGG | + | chr3.1:52775509-52775528 | None:intergenic | 45.0% | |
| TCGTGAGAATCGCTTTCTGA+GGG | - | chr3.1:52778947-52778966 | MS.gene53862:intron | 45.0% | |
| TCTCCTTTCCCTCTTCCATA+AGG | - | chr3.1:52775459-52775478 | MS.gene53862:intron | 45.0% | |
| TCTCTCAAGTCCTCAGAGAT+AGG | - | chr3.1:52774632-52774651 | MS.gene53862:intron | 45.0% | |
| TGCAATTCGTGTTTGCAGGA+AGG | - | chr3.1:52775509-52775528 | MS.gene53862:intron | 45.0% | |
| TGGATGGGGCTGTAATATAG+GGG | - | chr3.1:52777693-52777712 | MS.gene53862:intron | 45.0% | |
| TTCAGATGCCAATCTTGGCA+TGG | - | chr3.1:52779124-52779143 | MS.gene53862:CDS | 45.0% | |
| TTCTGATCCCATGCCAAGAT+TGG | + | chr3.1:52779135-52779154 | None:intergenic | 45.0% | |
| TTTCTTAGGGTAGAGAGGGA+AGG | + | chr3.1:52776805-52776824 | None:intergenic | 45.0% | |
| ! | ACCTGTTTCTTAGGGTAGAG+AGG | + | chr3.1:52776810-52776829 | None:intergenic | 45.0% |
| ! | ATGGTGGGAGTCTTGTGTAT+TGG | - | chr3.1:52777380-52777399 | MS.gene53862:intron | 45.0% |
| ! | CAAGCGAAAAGCACACTCAT+AGG | + | chr3.1:52773279-52773298 | None:intergenic | 45.0% |
| ! | CAGACGGAGTATTAGAATCG+AGG | + | chr3.1:52779085-52779104 | None:intergenic | 45.0% |
| ! | CCGAAGAAGCAGTTTTGCTT+TGG | + | chr3.1:52776931-52776950 | None:intergenic | 45.0% |
| ! | CCTGTTTCTCTCTGTGTCAA+AGG | - | chr3.1:52773090-52773109 | MS.gene53862:intron | 45.0% |
| ! | CCTGTTTCTTAGGGTAGAGA+GGG | + | chr3.1:52776809-52776828 | None:intergenic | 45.0% |
| ! | CTATGAGTGTGCTTTTCGCT+TGG | - | chr3.1:52773277-52773296 | MS.gene53862:intron | 45.0% |
| ! | GACGGAGTATTAGAATCGAG+GGG | + | chr3.1:52779083-52779102 | None:intergenic | 45.0% |
| ! | GCCAGTCTCTACAAACCTTT+TGG | - | chr3.1:52773342-52773361 | MS.gene53862:intron | 45.0% |
| ! | GTTTGAGTTTATCCCACCTC+TGG | - | chr3.1:52778711-52778730 | MS.gene53862:intron | 45.0% |
| ! | TATTGTGACCTTGTTGTCCC+AGG | + | chr3.1:52774570-52774589 | None:intergenic | 45.0% |
| ! | TCTTCGCTTTCGTCGCTTTA+TGG | - | chr3.1:52772733-52772752 | MS.gene53862:CDS | 45.0% |
| !! | ATGAGCCCAAGAGTGGATTT+TGG | - | chr3.1:52774478-52774497 | MS.gene53862:intron | 45.0% |
| !! | TGAGCCCAAGAGTGGATTTT+GGG | - | chr3.1:52774479-52774498 | MS.gene53862:intron | 45.0% |
| !!! | TATTTTTTAATAGAAATAAA+AGG | - | chr3.1:52774880-52774899 | MS.gene53862:CDS | 5.0% |
| AAAGCAGAGAGAGACCTTGG+AGG | + | chr3.1:52772812-52772831 | None:intergenic | 50.0% | |
| AACGCCCCAAAATCCACTCT+TGG | + | chr3.1:52774487-52774506 | None:intergenic | 50.0% | |
| ACCTAGGAAAACTATGGCCC+TGG | + | chr3.1:52776563-52776582 | None:intergenic | 50.0% | |
| ACGCCCCAAAATCCACTCTT+GGG | + | chr3.1:52774486-52774505 | None:intergenic | 50.0% | |
| ACTACCTAATATGGGGGACC+GGG | + | chr3.1:52773416-52773435 | None:intergenic | 50.0% | |
| ACTCATATCGGTGGCACCAT+TGG | - | chr3.1:52775288-52775307 | MS.gene53862:intron | 50.0% | |
| ACTGTGCAAAGGTGGGCAAA+GGG | - | chr3.1:52778200-52778219 | MS.gene53862:intron | 50.0% | |
| AGTGTCTTCAAAGGGGAAGC+AGG | + | chr3.1:52778649-52778668 | None:intergenic | 50.0% | |
| CAAACTCAAAACCCCTGCAG+GGG | + | chr3.1:52777423-52777442 | None:intergenic | 50.0% | |
| CACAAACCTTGCAAAGCCAG+AGG | + | chr3.1:52773607-52773626 | None:intergenic | 50.0% | |
| CACAAGACTCCCACCATATG+GGG | + | chr3.1:52777377-52777396 | None:intergenic | 50.0% | |
| CATGTCCGTAAGATGGACCT+AGG | + | chr3.1:52776579-52776598 | None:intergenic | 50.0% | |
| CCAAACTCAAAACCCCTGCA+GGG | + | chr3.1:52777424-52777443 | None:intergenic | 50.0% | |
| CCCATGCAATTCGTGTTTGC+AGG | - | chr3.1:52775505-52775524 | MS.gene53862:intron | 50.0% | |
| CCCTCTCTACCCTAAGAAAC+AGG | - | chr3.1:52776806-52776825 | MS.gene53862:intron | 50.0% | |
| CCTAGGAAAACTATGGCCCT+GGG | + | chr3.1:52776562-52776581 | None:intergenic | 50.0% | |
| CCTCCGTGTAAATCGCGAAA+GGG | - | chr3.1:52777025-52777044 | MS.gene53862:intron | 50.0% | |
| CTACTTCAAGCCCCATATGG+TGG | - | chr3.1:52777364-52777383 | MS.gene53862:CDS | 50.0% | |
| CTCCCCTTTCGCGATTTACA+CGG | + | chr3.1:52777031-52777050 | None:intergenic | 50.0% | |
| CTCCGTGTAAATCGCGAAAG+GGG | - | chr3.1:52777026-52777045 | MS.gene53862:intron | 50.0% | |
| CTCGTGAGAATCGCTTTCTG+AGG | - | chr3.1:52778946-52778965 | MS.gene53862:intron | 50.0% | |
| CTCTGTCCTACAAAGTTCCC+AGG | + | chr3.1:52775602-52775621 | None:intergenic | 50.0% | |
| CTGGGTTCAAACTCGTTGGA+AGG | - | chr3.1:52773178-52773197 | MS.gene53862:intron | 50.0% | |
| GAAGACTGTCAAGGCTGATC+TGG | - | chr3.1:52776956-52776975 | MS.gene53862:intron | 50.0% | |
| GACCGCTGAAACAAGAGTGA+TGG | - | chr3.1:52776605-52776624 | MS.gene53862:CDS | 50.0% | |
| GACTACCTAATATGGGGGAC+CGG | + | chr3.1:52773417-52773436 | None:intergenic | 50.0% | |
| GCTTCGTCTTCGAAAAGCGA+AGG | + | chr3.1:52772592-52772611 | None:intergenic | 50.0% | |
| GGATCGATGTGCTCAACTAG+AGG | - | chr3.1:52776989-52777008 | MS.gene53862:intron | 50.0% | |
| GGCTGATCTGGCATTTGCAA+AGG | - | chr3.1:52776968-52776987 | MS.gene53862:intron | 50.0% | |
| GGTCAAGTGTGAGTAGGCAA+TGG | - | chr3.1:52773577-52773596 | MS.gene53862:intron | 50.0% | |
| GTACTCAATTGCAAGGGGGT+TGG | - | chr3.1:52773112-52773131 | MS.gene53862:intron | 50.0% | |
| GTGTCTTCAAAGGGGAAGCA+GGG | + | chr3.1:52778648-52778667 | None:intergenic | 50.0% | |
| GTTGCAGGTTGCAATGGCAA+TGG | - | chr3.1:52776902-52776921 | MS.gene53862:intron | 50.0% | |
| TACTGTGCAAAGGTGGGCAA+AGG | - | chr3.1:52778199-52778218 | MS.gene53862:intron | 50.0% | |
| TCCTCCGTGTAAATCGCGAA+AGG | - | chr3.1:52777024-52777043 | MS.gene53862:intron | 50.0% | |
| TCGGGAGTTGAAGACTGTCA+AGG | - | chr3.1:52776947-52776966 | MS.gene53862:intron | 50.0% | |
| TCTAGCTGAGAAAGCTCGCT+TGG | - | chr3.1:52778902-52778921 | MS.gene53862:intron | 50.0% | |
| TGCCATCTGGATTTCGTTGC+AGG | - | chr3.1:52776887-52776906 | MS.gene53862:intron | 50.0% | |
| TGGCGTAACATCAAGGGGAA+AGG | - | chr3.1:52774593-52774612 | MS.gene53862:intron | 50.0% | |
| TTTCCCCTTGATGTTACGCC+AGG | + | chr3.1:52774594-52774613 | None:intergenic | 50.0% | |
| ! | GCTAGTGTCATTCTCTGTGC+AGG | - | chr3.1:52775176-52775195 | MS.gene53862:intron | 50.0% |
| ! | TGAGAATCGCTTTCTGAGGG+AGG | - | chr3.1:52778950-52778969 | MS.gene53862:intron | 50.0% |
| !! | GAGCCCAAGAGTGGATTTTG+GGG | - | chr3.1:52774480-52774499 | MS.gene53862:intron | 50.0% |
| !! | GAGGTTCTAAAGCCTACCCA+GGG | - | chr3.1:52776543-52776562 | MS.gene53862:CDS | 50.0% |
| !! | GGTTCTGGGTTCAAACTCGT+TGG | - | chr3.1:52773174-52773193 | MS.gene53862:intron | 50.0% |
| !! | TGAGGTTCTAAAGCCTACCC+AGG | - | chr3.1:52776542-52776561 | MS.gene53862:CDS | 50.0% |
| !!! | GATTTTGGGGCGTTCTAGCT+AGG | - | chr3.1:52774493-52774512 | MS.gene53862:intron | 50.0% |
| ACTCACACTTGACCTTGCGC+AGG | + | chr3.1:52773571-52773590 | None:intergenic | 55.0% | |
| AGAGAGACCTTGGAGGATGG+AGG | + | chr3.1:52772805-52772824 | None:intergenic | 55.0% | |
| AGTAGGCAATGGAAGCCCTC+TGG | - | chr3.1:52773588-52773607 | MS.gene53862:intron | 55.0% | |
| CAGAGAGAGACCTTGGAGGA+TGG | + | chr3.1:52772808-52772827 | None:intergenic | 55.0% | |
| CCCTTTCGCGATTTACACGG+AGG | + | chr3.1:52777028-52777047 | None:intergenic | 55.0% | |
| CGTTGCAAGAACCCCAGTTG+CGG | - | chr3.1:52775645-52775664 | MS.gene53862:intron | 55.0% | |
| CTACCTAATATGGGGGACCG+GGG | + | chr3.1:52773415-52773434 | None:intergenic | 55.0% | |
| CTGTGCAAAGGTGGGCAAAG+GGG | - | chr3.1:52778201-52778220 | MS.gene53862:intron | 55.0% | |
| GACACAGAGAGAAACAGGGG+AGG | + | chr3.1:52773088-52773107 | None:intergenic | 55.0% | |
| GATGGAGGAGCAGTAGGAGT+AGG | + | chr3.1:52772790-52772809 | None:intergenic | 55.0% | |
| GCCAAACTCAAAACCCCTGC+AGG | + | chr3.1:52777425-52777444 | None:intergenic | 55.0% | |
| GCGCAAGGTCAAGTGTGAGT+AGG | - | chr3.1:52773571-52773590 | MS.gene53862:intron | 55.0% | |
| GGAAAACTATGGCCCTGGGT+AGG | + | chr3.1:52776558-52776577 | None:intergenic | 55.0% | |
| GGCATATTGTTGCCTGCGCA+AGG | - | chr3.1:52773556-52773575 | MS.gene53862:intron | 55.0% | |
| TACCTAATATGGGGGACCGG+GGG | + | chr3.1:52773414-52773433 | None:intergenic | 55.0% | |
| TACTGCTCCTCCATCCTCCA+AGG | - | chr3.1:52772795-52772814 | MS.gene53862:CDS | 55.0% | |
| TTGGAGGATGGAGGAGCAGT+AGG | + | chr3.1:52772796-52772815 | None:intergenic | 55.0% | |
| ! | CCCAGGGCCATAGTTTTCCT+AGG | - | chr3.1:52776559-52776578 | MS.gene53862:CDS | 55.0% |
| ! | CGAGGGGCATAATAGGCACT+GGG | + | chr3.1:52779067-52779086 | None:intergenic | 55.0% |
| ! | GAGGGGCATAATAGGCACTG+GGG | + | chr3.1:52779066-52779085 | None:intergenic | 55.0% |
| ! | GGCACTGGGGGTAAGTTAAG+AGG | + | chr3.1:52779053-52779072 | None:intergenic | 55.0% |
| ! | GTAGGAGTAGGTTGAGACCG+CGG | + | chr3.1:52772778-52772797 | None:intergenic | 55.0% |
| ! | TCCTTGCGTTGGCGACATCT+GGG | + | chr3.1:52775672-52775691 | None:intergenic | 55.0% |
| ! | TCGAGGGGCATAATAGGCAC+TGG | + | chr3.1:52779068-52779087 | None:intergenic | 55.0% |
| !! | AGGGGCATAATAGGCACTGG+GGG | + | chr3.1:52779065-52779084 | None:intergenic | 55.0% |
| !! | TGAAGGCATCTCGCGACGTA+AGG | - | chr3.1:52775708-52775727 | MS.gene53862:intron | 55.0% |
| !!! | CCCTGCAGGGGTTTTGAGTT+TGG | - | chr3.1:52777421-52777440 | MS.gene53862:intron | 55.0% |
| AAGGTGGGCAAAGGGGAGCA+TGG | - | chr3.1:52778208-52778227 | MS.gene53862:intron | 60.0% | |
| ACCTAATATGGGGGACCGGG+GGG | + | chr3.1:52773413-52773432 | None:intergenic | 60.0% | |
| AGGCATCTCGCGACGTAAGG+TGG | - | chr3.1:52775711-52775730 | MS.gene53862:intron | 60.0% | |
| CAAAGGGGAAGCAGGGAGAG+TGG | + | chr3.1:52778641-52778660 | None:intergenic | 60.0% | |
| TCCCAGATGTCGCCAACGCA+AGG | - | chr3.1:52775668-52775687 | MS.gene53862:intron | 60.0% | |
| ! | CGACATCTGGGACCGCAACT+GGG | + | chr3.1:52775660-52775679 | None:intergenic | 60.0% |
| ! | CTCCTTGCGTTGGCGACATC+TGG | + | chr3.1:52775673-52775692 | None:intergenic | 60.0% |
| ! | GACATCTGGGACCGCAACTG+GGG | + | chr3.1:52775659-52775678 | None:intergenic | 60.0% |
| !! | GGAAGCCCTCTGGCTTTGCA+AGG | - | chr3.1:52773598-52773617 | MS.gene53862:intron | 60.0% |
| CCTAATATGGGGGACCGGGG+GGG | + | chr3.1:52773412-52773431 | None:intergenic | 65.0% | |
| CTAATATGGGGGACCGGGGG+GGG | + | chr3.1:52773411-52773430 | None:intergenic | 65.0% | |
| TAATATGGGGGACCGGGGGG+GGG | + | chr3.1:52773410-52773429 | None:intergenic | 65.0% | |
| ! | GCGACATCTGGGACCGCAAC+TGG | + | chr3.1:52775661-52775680 | None:intergenic | 65.0% |
| AATATGGGGGACCGGGGGGG+GGG | + | chr3.1:52773409-52773428 | None:intergenic | 70.0% | |
| CCCCCCCGGTCCCCCATATT+AGG | - | chr3.1:52773409-52773428 | MS.gene53862:intron | 70.0% | |
| ATATGGGGGACCGGGGGGGG+GGG | + | chr3.1:52773408-52773427 | None:intergenic | 75.0% | |
| ! | TATGGGGGACCGGGGGGGGG+GGG | + | chr3.1:52773407-52773426 | None:intergenic | 80.0% |
| ! | ATGGGGGACCGGGGGGGGGG+GGG | + | chr3.1:52773406-52773425 | None:intergenic | 85.0% |
| ! | TGGGGGACCGGGGGGGGGGG+GGG | + | chr3.1:52773405-52773424 | None:intergenic | 90.0% |
| ! | ACCGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773399-52773418 | None:intergenic | 95.0% |
| ! | GACCGGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773400-52773419 | None:intergenic | 95.0% |
| ! | GGACCGGGGGGGGGGGGGGG+GGG | + | chr3.1:52773401-52773420 | None:intergenic | 95.0% |
| ! | GGGACCGGGGGGGGGGGGGG+GGG | + | chr3.1:52773402-52773421 | None:intergenic | 95.0% |
| ! | GGGGACCGGGGGGGGGGGGG+GGG | + | chr3.1:52773403-52773422 | None:intergenic | 95.0% |
| ! | GGGGGACCGGGGGGGGGGGG+GGG | + | chr3.1:52773404-52773423 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 52772547 | 52779280 | 52772547 | ID=MS.gene53862 |
| chr3.1 | mRNA | 52772547 | 52779280 | 52772547 | ID=MS.gene53862.t1;Parent=MS.gene53862 |
| chr3.1 | exon | 52779011 | 52779280 | 52779011 | ID=MS.gene53862.t1.exon1;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52779011 | 52779280 | 52779011 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| chr3.1 | exon | 52777213 | 52777389 | 52777213 | ID=MS.gene53862.t1.exon2;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52777213 | 52777389 | 52777213 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| chr3.1 | exon | 52776504 | 52776629 | 52776504 | ID=MS.gene53862.t1.exon3;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52776504 | 52776629 | 52776504 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| chr3.1 | exon | 52776103 | 52776300 | 52776103 | ID=MS.gene53862.t1.exon4;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52776103 | 52776300 | 52776103 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| chr3.1 | exon | 52774754 | 52774918 | 52774754 | ID=MS.gene53862.t1.exon5;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52774754 | 52774918 | 52774754 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| chr3.1 | exon | 52772547 | 52772948 | 52772547 | ID=MS.gene53862.t1.exon6;Parent=MS.gene53862.t1 |
| chr3.1 | CDS | 52772547 | 52772948 | 52772547 | ID=cds.MS.gene53862.t1;Parent=MS.gene53862.t1 |
| Gene Sequence |
| Protein sequence |
