Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54605.t1 | XP_013456231.1 | 97.1 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 2.20E-236 | 827.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54605.t1 | Q8RWR1 | 70.1 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 7.7e-169 | 594.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54605.t1 | A0A072UKM1 | 97.1 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 1.6e-236 | 827.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052224 | MS.gene54605 | -0.821576 | 3.75E-53 | -1.69E-46 |
MS.gene053509 | MS.gene54605 | 0.821206 | 4.57E-53 | -1.69E-46 |
MS.gene056338 | MS.gene54605 | 0.94067 | 1.57E-100 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54605.t1 | MTR_4g066020 | 97.094 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 0.0 | 830 |
MS.gene54605.t1 | MTR_1g071300 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 1.79e-21 | 97.1 |
MS.gene54605.t1 | MTR_1g071300 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 1.80e-21 | 96.7 |
MS.gene54605.t1 | MTR_1g071300 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 2.29e-21 | 96.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54605.t1 | AT3G20810 | 71.981 | 414 | 109 | 4 | 4 | 411 | 5 | 417 | 0.0 | 607 |
MS.gene54605.t1 | AT3G20810 | 70.118 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 0.0 | 598 |
MS.gene54605.t1 | AT3G20810 | 71.320 | 394 | 107 | 3 | 4 | 392 | 5 | 397 | 0.0 | 579 |
MS.gene54605.t1 | AT3G20810 | 68.807 | 327 | 96 | 3 | 4 | 325 | 5 | 330 | 1.89e-159 | 452 |
MS.gene54605.t1 | AT3G20810 | 69.255 | 322 | 93 | 3 | 4 | 320 | 5 | 325 | 4.26e-158 | 450 |
MS.gene54605.t1 | AT5G19840 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.29e-23 | 101 |
MS.gene54605.t1 | AT5G19840 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.68e-23 | 101 |
MS.gene54605.t1 | AT3G45880 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 1.18e-11 | 66.2 |
MS.gene54605.t1 | AT3G45880 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 1.24e-11 | 65.9 |
Find 115 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGATATGGGGATTATTA+TGG | 0.186608 | 4.3:+38021209 | MS.gene54605:CDS |
CTATGAAAATGGAGAGTTTA+AGG | 0.194905 | 4.3:+38021173 | MS.gene54605:CDS |
TTTGAATACCTGATCAAATA+AGG | 0.226160 | 4.3:-38024633 | None:intergenic |
AGCGCTTAGGGCTTTGGATA+TGG | 0.226645 | 4.3:+38021197 | MS.gene54605:CDS |
CAGCCAGGTAATGATCTTTC+AGG | 0.278024 | 4.3:-38023289 | None:intergenic |
AATGGGAGGTGTAAAGATTT+TGG | 0.296847 | 4.3:+38021309 | MS.gene54605:CDS |
AGGTTGGTTAAGGTTGATAA+TGG | 0.314847 | 4.3:+38021291 | MS.gene54605:CDS |
TCCTTGGCACTCGGTGTTGC+CGG | 0.319116 | 4.3:+38021101 | MS.gene54605:CDS |
CCAGTTTATCAGTTAGCTTT+TGG | 0.327040 | 4.3:+38026210 | MS.gene54605:CDS |
TAAGGAAGCGCTTAGGGCTT+TGG | 0.336994 | 4.3:+38021191 | MS.gene54605:CDS |
GGCGCGAATGTCGCCGGCGG+CGG | 0.341012 | 4.3:-38021034 | None:intergenic |
TTGGATATGGGGATTATTAT+GGG | 0.343770 | 4.3:+38021210 | MS.gene54605:CDS |
GAGTTTGCTTAGAAAGGATT+TGG | 0.346163 | 4.3:+38021236 | MS.gene54605:CDS |
CCAAAAGCTAACTGATAAAC+TGG | 0.357343 | 4.3:-38026210 | None:intergenic |
AATTCCAAGTCTTGCACCTT+AGG | 0.363637 | 4.3:-38026110 | None:intergenic |
GATTACTTGCAAAGAGTTGC+TGG | 0.375148 | 4.3:+38023377 | MS.gene54605:CDS |
GTTTCACACTTCCAGGTTGT+TGG | 0.378528 | 4.3:+38025399 | MS.gene54605:intron |
GCGAAGTGTTGCTATGAAAA+TGG | 0.381872 | 4.3:+38021162 | MS.gene54605:CDS |
AGATCTCTCAATGCTTGGTT+TGG | 0.381952 | 4.3:+38024818 | MS.gene54605:CDS |
ATGCAGTCGCTGATGATAAC+TGG | 0.382618 | 4.3:-38023317 | None:intergenic |
GCGCTTAGGGCTTTGGATAT+GGG | 0.383753 | 4.3:+38021198 | MS.gene54605:CDS |
TTTGAAGCAAGGGACTTAAC+AGG | 0.394352 | 4.3:-38023227 | None:intergenic |
AGCAGCTGCACTCCGGTCCT+TGG | 0.396639 | 4.3:+38021085 | MS.gene54605:CDS |
GGGTGGGAGTTTGCTTAGAA+AGG | 0.397183 | 4.3:+38021230 | MS.gene54605:CDS |
TTCTGCTGTTGTGAAGGTTT+CGG | 0.399127 | 4.3:+38021260 | MS.gene54605:CDS |
TTTCACACTTCCAGGTTGTT+GGG | 0.399540 | 4.3:+38025400 | MS.gene54605:intron |
TGCTGGTGACCGCACTGTTC+CGG | 0.405682 | 4.3:+38023394 | MS.gene54605:CDS |
TCAGCATCCCTTATTTGATC+AGG | 0.417700 | 4.3:+38024625 | MS.gene54605:CDS |
GGAGAAAGCGAGGTTGGTTA+AGG | 0.420028 | 4.3:+38021281 | MS.gene54605:CDS |
AAAACTATTTATGTGCAGAT+TGG | 0.423646 | 4.3:+38024519 | MS.gene54605:CDS |
AATGCTTGGTTTGGTCCAGC+TGG | 0.430502 | 4.3:+38024827 | MS.gene54605:CDS |
GAGAGTTTAAGGAAGCGCTT+AGG | 0.432039 | 4.3:+38021184 | MS.gene54605:CDS |
TTCTGCGGCGCGAATGTCGC+CGG | 0.434979 | 4.3:-38021040 | None:intergenic |
ACAAGAGTAATTACCTCAAC+CGG | 0.440109 | 4.3:-38023413 | None:intergenic |
TTGAATACCTGATCAAATAA+GGG | 0.448968 | 4.3:-38024632 | None:intergenic |
GGTTGGTTAAGGTTGATAAT+GGG | 0.450399 | 4.3:+38021292 | MS.gene54605:CDS |
TGAGATGGAGTGGAGGAGTG+TGG | 0.454775 | 4.3:-38020971 | None:intergenic |
CTTTAGATCTTATCCGATCA+AGG | 0.458405 | 4.3:-38024571 | None:intergenic |
CATAGTGCCACCACTTTGGC+GGG | 0.459007 | 4.3:-38026172 | None:intergenic |
AATGTCGCCGGCGGCGGCGA+GGG | 0.462687 | 4.3:-38021028 | None:intergenic |
TGATAACTGGAGAGCCAGCC+AGG | 0.466614 | 4.3:-38023304 | None:intergenic |
ATGTCCTCCCTCGCCGCCGC+CGG | 0.467944 | 4.3:+38021021 | MS.gene54605:CDS |
CGCTTAGGGCTTTGGATATG+GGG | 0.468020 | 4.3:+38021199 | MS.gene54605:CDS |
GAATGTCGCCGGCGGCGGCG+AGG | 0.469365 | 4.3:-38021029 | None:intergenic |
GCAAAGCATGATTTCTGAGT+AGG | 0.469422 | 4.3:-38025472 | None:intergenic |
GTTTCCTAAGGTGCAAGACT+TGG | 0.471641 | 4.3:+38026106 | MS.gene54605:CDS |
CTTGATCGGATAAGATCTAA+AGG | 0.478631 | 4.3:+38024572 | MS.gene54605:CDS |
GTCGCCGGCGGCGGCGAGGG+AGG | 0.481353 | 4.3:-38021025 | None:intergenic |
AGCTAAGATCTCTCAATGCT+TGG | 0.481715 | 4.3:+38024813 | MS.gene54605:CDS |
GAAGAGATCTGCCTTGTCAC+TGG | 0.484449 | 4.3:+38023259 | MS.gene54605:CDS |
TGACCGCACTGTTCCGGTTG+AGG | 0.485106 | 4.3:+38023400 | MS.gene54605:CDS |
GCACTCCGGTCCTTGGCACT+CGG | 0.485361 | 4.3:+38021092 | MS.gene54605:CDS |
CAAAGCATGATTTCTGAGTA+GGG | 0.486239 | 4.3:-38025471 | None:intergenic |
CGGCGGCGAGGGAGGACATA+CGG | 0.496322 | 4.3:-38021017 | None:intergenic |
AATGGCAGATAAATGAGCTT+CGG | 0.499618 | 4.3:+38024747 | MS.gene54605:intron |
GGGACTTAACAGGCAAAAGT+TGG | 0.501194 | 4.3:-38023217 | None:intergenic |
TCAGCGACTGCATGGCGCAC+TGG | 0.503078 | 4.3:+38023327 | MS.gene54605:CDS |
CACTACAAGCTTTGAAGCAA+GGG | 0.503171 | 4.3:-38023237 | None:intergenic |
CTGAAAGATCATTACCTGGC+TGG | 0.509814 | 4.3:+38023290 | MS.gene54605:CDS |
CGCAGAAGCAGTTCGTGAGA+TGG | 0.510927 | 4.3:+38021056 | MS.gene54605:CDS |
CGCACATAGTGCCACCACTT+TGG | 0.511097 | 4.3:-38026176 | None:intergenic |
CCACCAGTAAAACAATAGTC+AGG | 0.511588 | 4.3:-38024785 | None:intergenic |
GAGATGGAGTGGAGGAGTGT+GGG | 0.514149 | 4.3:-38020970 | None:intergenic |
AGTTCCTCAGACAAAGATGC+TGG | 0.515281 | 4.3:-38025444 | None:intergenic |
AGAGTTTAAGGAAGCGCTTA+GGG | 0.517383 | 4.3:+38021185 | MS.gene54605:CDS |
AAGCAGTTCGTGAGATGGCG+TGG | 0.524892 | 4.3:+38021061 | MS.gene54605:CDS |
CATGCTTTGCAATTCCAGCC+AGG | 0.532765 | 4.3:+38025485 | MS.gene54605:CDS |
GAGAGAGTCGCTGATGGATG+AGG | 0.536053 | 4.3:-38020920 | None:intergenic |
GGTTTCGGAGAAAGCGAGGT+TGG | 0.538332 | 4.3:+38021275 | MS.gene54605:CDS |
CAACACCGAGTGCCAAGGAC+CGG | 0.542861 | 4.3:-38021097 | None:intergenic |
GTATGTTATGATGTGGATCA+TGG | 0.546162 | 4.3:-38024868 | None:intergenic |
TTTGGATTCTGCTGTTGTGA+AGG | 0.548244 | 4.3:+38021254 | MS.gene54605:CDS |
GGATGCTGAGCAAGATATGT+AGG | 0.548812 | 4.3:-38024611 | None:intergenic |
ACATAGTGCCACCACTTTGG+CGG | 0.549361 | 4.3:-38026173 | None:intergenic |
GGAGATTCTGCGTCGAGCGT+TGG | 0.551554 | 4.3:-38020949 | None:intergenic |
AGATGAATTGAAGTTTCCTA+AGG | 0.560556 | 4.3:+38026094 | MS.gene54605:CDS |
TGCGGCGCGAATGTCGCCGG+CGG | 0.563097 | 4.3:-38021037 | None:intergenic |
TTATCCAGCATCTTTGTCTG+AGG | 0.563839 | 4.3:+38025440 | MS.gene54605:CDS |
TGATGTGGATCATGGTGTAA+TGG | 0.564342 | 4.3:-38024860 | None:intergenic |
GTGGCGTGACGCGTACTCGA+TGG | 0.564597 | 4.3:+38021125 | MS.gene54605:CDS |
ATATGGGGATTATTATGGGT+GGG | 0.564715 | 4.3:+38021214 | MS.gene54605:CDS |
CAGAAAACTAAATACCTGGC+TGG | 0.564939 | 4.3:-38025499 | None:intergenic |
CATCTCACGAACTGCTTCTG+CGG | 0.572178 | 4.3:-38021055 | None:intergenic |
CTTCCTGAAAGATCATTACC+TGG | 0.575421 | 4.3:+38023286 | MS.gene54605:CDS |
GCAAGATATGTAGGACCACC+AGG | 0.576296 | 4.3:-38024602 | None:intergenic |
TCTTGAATTTGATGTTTCAA+AGG | 0.576493 | 4.3:+38021356 | MS.gene54605:CDS |
CTCCACTCCATCTCATCCCA+CGG | 0.580867 | 4.3:+38020979 | MS.gene54605:CDS |
ACCGGCAACACCGAGTGCCA+AGG | 0.583074 | 4.3:-38021102 | None:intergenic |
GTAGCCTCCGTGGGATGAGA+TGG | 0.584469 | 4.3:-38020986 | None:intergenic |
AGTTATCATCAGCGACTGCA+TGG | 0.585260 | 4.3:+38023319 | MS.gene54605:CDS |
TCACTACAAGCTTTGAAGCA+AGG | 0.585461 | 4.3:-38023238 | None:intergenic |
CAGGAAGTTCTCCAGTGACA+AGG | 0.586848 | 4.3:-38023270 | None:intergenic |
GATATGGGGATTATTATGGG+TGG | 0.587263 | 4.3:+38021213 | MS.gene54605:CDS |
ACATCATAACATACTAGCAC+AGG | 0.592715 | 4.3:+38024877 | MS.gene54605:CDS |
GGCACTCGGTGTTGCCGGTG+TGG | 0.599102 | 4.3:+38021106 | MS.gene54605:CDS |
AATGGCGTTACAGTTCCAGC+TGG | 0.601305 | 4.3:-38024842 | None:intergenic |
TGAAGGTTTCGGAGAAAGCG+AGG | 0.606598 | 4.3:+38021271 | MS.gene54605:CDS |
TGTTTCGAGAGAGTCGCTGA+TGG | 0.607399 | 4.3:-38020926 | None:intergenic |
GACGTAGGCGTAGCCTCCGT+GGG | 0.608040 | 4.3:-38020995 | None:intergenic |
TGGTTAAGGTTGATAATGGG+AGG | 0.611770 | 4.3:+38021295 | MS.gene54605:CDS |
GCGTGGGAGCAGCTGCACTC+CGG | 0.612868 | 4.3:+38021078 | MS.gene54605:CDS |
TATATATCCCGCCAAAGTGG+TGG | 0.622734 | 4.3:+38026165 | MS.gene54605:CDS |
AGAGTCGCTGATGGATGAGG+TGG | 0.626527 | 4.3:-38020917 | None:intergenic |
AGCAGTTCGTGAGATGGCGT+GGG | 0.629178 | 4.3:+38021062 | MS.gene54605:CDS |
GGACGTAGGCGTAGCCTCCG+TGG | 0.630457 | 4.3:-38020996 | None:intergenic |
CGTGGGATGAGATGGAGTGG+AGG | 0.638713 | 4.3:-38020978 | None:intergenic |
CTCCGTGGGATGAGATGGAG+TGG | 0.638980 | 4.3:-38020981 | None:intergenic |
AAAGCATGATTTCTGAGTAG+GGG | 0.643449 | 4.3:-38025470 | None:intergenic |
AAAGTAATACGACATTAAGA+CGG | 0.647553 | 4.3:-38026257 | None:intergenic |
TGTTATATATCCCGCCAAAG+TGG | 0.659158 | 4.3:+38026162 | MS.gene54605:CDS |
TGTGCTAGTATGTTATGATG+TGG | 0.675622 | 4.3:-38024875 | None:intergenic |
CACTCCATCTCATCCCACGG+AGG | 0.717936 | 4.3:+38020982 | MS.gene54605:CDS |
GAGTACGCGTCACGCCACAC+CGG | 0.723133 | 4.3:-38021120 | None:intergenic |
GAGGGAGGACATACGGACGT+AGG | 0.726924 | 4.3:-38021010 | None:intergenic |
TTACCTCAACCGGAACAGTG+CGG | 0.784273 | 4.3:-38023403 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATTAATTAAAAAAAGG+AGG | - | chr4.3:38022001-38022020 | None:intergenic | 10.0% |
!!! | TAATTTGAATAAATTGATTT+TGG | + | chr4.3:38022409-38022428 | MS.gene54605:intron | 10.0% |
!! | AAAAGTTTAATTCATTTCAA+TGG | + | chr4.3:38022116-38022135 | MS.gene54605:intron | 15.0% |
!! | AAATTTAGCTATTTAAAAAG+AGG | - | chr4.3:38023959-38023978 | None:intergenic | 15.0% |
!! | AATTTAGCTATTTAAAAAGA+GGG | - | chr4.3:38023958-38023977 | None:intergenic | 15.0% |
!! | TATAACACAATTGTAATATA+GGG | - | chr4.3:38025161-38025180 | None:intergenic | 15.0% |
!! | TTAATTATTAATACTACGAT+TGG | + | chr4.3:38022313-38022332 | MS.gene54605:intron | 15.0% |
!!! | AATAGCTAAATTTATTTCTA+CGG | + | chr4.3:38023966-38023985 | MS.gene54605:intron | 15.0% |
!!! | AGTGAATAAATAAATTTGTT+TGG | + | chr4.3:38024160-38024179 | MS.gene54605:intron | 15.0% |
!!! | GAAATTTAAGTTCTTTTTTT+TGG | + | chr4.3:38023696-38023715 | MS.gene54605:intron | 15.0% |
!!! | TCATTTTATTGCTTTTAATT+AGG | + | chr4.3:38025968-38025987 | MS.gene54605:intron | 15.0% |
!! | AAAAAAATTACATGCATGTT+TGG | - | chr4.3:38022713-38022732 | None:intergenic | 20.0% |
!! | AATAGTATACTAGAAGAAAA+GGG | + | chr4.3:38024466-38024485 | MS.gene54605:intron | 20.0% |
!! | AATTAAGGAAATACTTCTAT+AGG | - | chr4.3:38025681-38025700 | None:intergenic | 20.0% |
!! | AGTAGTTATTAGTGAAATAA+AGG | + | chr4.3:38025073-38025092 | MS.gene54605:intron | 20.0% |
!! | AGTTTACCTATACAATATAT+GGG | + | chr4.3:38025851-38025870 | MS.gene54605:intron | 20.0% |
!! | ATAACATTTAAACAATGGAA+TGG | + | chr4.3:38022990-38023009 | MS.gene54605:intron | 20.0% |
!! | ATATAACATGATTTAACTCT+GGG | - | chr4.3:38025011-38025030 | None:intergenic | 20.0% |
!! | ATGTGTAAAATAACTTTACA+CGG | + | chr4.3:38021501-38021520 | MS.gene54605:intron | 20.0% |
!! | ATTTAGCTATTTAAAAAGAG+GGG | - | chr4.3:38023957-38023976 | None:intergenic | 20.0% |
!! | CAAGTTAAAATTCATTTAAG+AGG | + | chr4.3:38022556-38022575 | MS.gene54605:intron | 20.0% |
!! | CTATAACACAATTGTAATAT+AGG | - | chr4.3:38025162-38025181 | None:intergenic | 20.0% |
!! | GATATAAGATAGAAATGTTT+AGG | - | chr4.3:38025806-38025825 | None:intergenic | 20.0% |
!! | GATGAATTTATGATTAATTC+TGG | - | chr4.3:38023996-38024015 | None:intergenic | 20.0% |
!! | GTAATCTAAAAGACTTATTT+GGG | + | chr4.3:38021939-38021958 | MS.gene54605:intron | 20.0% |
!! | GTAGTATTCATTAATTGATA+TGG | + | chr4.3:38021466-38021485 | MS.gene54605:intron | 20.0% |
!! | TAATAGTATACTAGAAGAAA+AGG | + | chr4.3:38024465-38024484 | MS.gene54605:intron | 20.0% |
!! | TACAAATTACAGTATAAAGA+CGG | - | chr4.3:38024360-38024379 | None:intergenic | 20.0% |
!! | TATATAACATGATTTAACTC+TGG | - | chr4.3:38025012-38025031 | None:intergenic | 20.0% |
!! | TCCATTGTTTAAATGTTATA+AGG | - | chr4.3:38022989-38023008 | None:intergenic | 20.0% |
!! | TCCTTATAACATTTAAACAA+TGG | + | chr4.3:38022985-38023004 | MS.gene54605:intron | 20.0% |
!! | TGTAATCTAAAAGACTTATT+TGG | + | chr4.3:38021938-38021957 | MS.gene54605:intron | 20.0% |
!! | TTAATACACTTTGATTACAT+TGG | + | chr4.3:38023887-38023906 | MS.gene54605:intron | 20.0% |
!!! | AGAGATAAAGTTTTCAAAAT+CGG | + | chr4.3:38023493-38023512 | MS.gene54605:intron | 20.0% |
!!! | AGTTTTGTAATTGTTAGTTA+AGG | - | chr4.3:38023614-38023633 | None:intergenic | 20.0% |
!!! | ATAGCTAAATTTATTTCTAC+GGG | + | chr4.3:38023967-38023986 | MS.gene54605:intron | 20.0% |
!!! | GTAATTTTTTTTTTCTGTGA+TGG | + | chr4.3:38024423-38024442 | MS.gene54605:intron | 20.0% |
!!! | TATATTATTCCAGTTTTTCT+TGG | - | chr4.3:38023357-38023376 | None:intergenic | 20.0% |
!!! | TTATTGCTTTTTGATATTTC+TGG | + | chr4.3:38026011-38026030 | MS.gene54605:intron | 20.0% |
!!! | TTCAAATTACATTTTTGCTA+TGG | - | chr4.3:38022398-38022417 | None:intergenic | 20.0% |
! | AAAACTATTTATGTGCAGAT+TGG | + | chr4.3:38024519-38024538 | MS.gene54605:CDS | 25.0% |
! | AAATAAGAACCATAATAGCA+AGG | - | chr4.3:38025037-38025056 | None:intergenic | 25.0% |
! | AAATTAATCCACGACTTTAT+AGG | - | chr4.3:38021970-38021989 | None:intergenic | 25.0% |
! | AACACATGATTGAATTCAAA+GGG | - | chr4.3:38021400-38021419 | None:intergenic | 25.0% |
! | AATAAGAACCATAATAGCAA+GGG | - | chr4.3:38025036-38025055 | None:intergenic | 25.0% |
! | ACAAATTACAGTATAAAGAC+GGG | - | chr4.3:38024359-38024378 | None:intergenic | 25.0% |
! | ACAACTTTGTTACTAGTATT+TGG | + | chr4.3:38023732-38023751 | MS.gene54605:intron | 25.0% |
! | ACAGATTTCTCTTAAGATAA+GGG | - | chr4.3:38025268-38025287 | None:intergenic | 25.0% |
! | ACATGAGTAAAATGATTATG+GGG | + | chr4.3:38023132-38023151 | MS.gene54605:intron | 25.0% |
! | AGACATGAGTAAAATGATTA+TGG | + | chr4.3:38023130-38023149 | MS.gene54605:intron | 25.0% |
! | ATAAATACAAACAACACTTG+AGG | - | chr4.3:38024388-38024407 | None:intergenic | 25.0% |
! | CAACTTTGTTACTAGTATTT+GGG | + | chr4.3:38023733-38023752 | MS.gene54605:intron | 25.0% |
! | CAATCAGAGAGATATTTAAA+GGG | - | chr4.3:38024078-38024097 | None:intergenic | 25.0% |
! | CAGAAAAAAAAAATTACACG+AGG | - | chr4.3:38024420-38024439 | None:intergenic | 25.0% |
! | CAGTTTACCTATACAATATA+TGG | + | chr4.3:38025850-38025869 | MS.gene54605:intron | 25.0% |
! | CATAAAATTCAAGCTATGAA+TGG | - | chr4.3:38022036-38022055 | None:intergenic | 25.0% |
! | CATAATAAAACTCCATTGTT+TGG | + | chr4.3:38022832-38022851 | MS.gene54605:intron | 25.0% |
! | CATATATTGTATAGGTAAAC+TGG | - | chr4.3:38025852-38025871 | None:intergenic | 25.0% |
! | CCAATTAAATAATTTCCTAG+TGG | - | chr4.3:38024018-38024037 | None:intergenic | 25.0% |
! | CCACTAGGAAATTATTTAAT+TGG | + | chr4.3:38024015-38024034 | MS.gene54605:intron | 25.0% |
! | CCATAGAATGATATATTTGA+CGG | + | chr4.3:38025363-38025382 | MS.gene54605:intron | 25.0% |
! | CTATAAAGTAAACGTTAGAA+GGG | - | chr4.3:38023178-38023197 | None:intergenic | 25.0% |
! | GACATGAGTAAAATGATTAT+GGG | + | chr4.3:38023131-38023150 | MS.gene54605:intron | 25.0% |
! | GTTTACCTATACAATATATG+GGG | + | chr4.3:38025852-38025871 | MS.gene54605:intron | 25.0% |
! | TAACAGCTAATGAACATTTA+CGG | - | chr4.3:38023658-38023677 | None:intergenic | 25.0% |
! | TAATCATAAATTCATCCACT+AGG | + | chr4.3:38024000-38024019 | MS.gene54605:intron | 25.0% |
! | TCTTGAATTTGATGTTTCAA+AGG | + | chr4.3:38021356-38021375 | MS.gene54605:CDS | 25.0% |
! | TTAAACAATGGAATGGTAAT+TGG | + | chr4.3:38022997-38023016 | MS.gene54605:intron | 25.0% |
! | TTGAATACCTGATCAAATAA+GGG | - | chr4.3:38024635-38024654 | None:intergenic | 25.0% |
! | TTGTTACTATTATTGTTACG+AGG | + | chr4.3:38022168-38022187 | MS.gene54605:intron | 25.0% |
! | TTTGAATACCTGATCAAATA+AGG | - | chr4.3:38024636-38024655 | None:intergenic | 25.0% |
!! | AAATCTGTGATACAACATTT+TGG | + | chr4.3:38025280-38025299 | MS.gene54605:intron | 25.0% |
!! | CTACATTTTCAACAAAATCA+AGG | - | chr4.3:38022654-38022673 | None:intergenic | 25.0% |
!! | GAGATAAAGTTTTCAAAATC+GGG | + | chr4.3:38023494-38023513 | MS.gene54605:intron | 25.0% |
!! | GTAAAAATATTTTACACCGT+CGG | + | chr4.3:38021797-38021816 | MS.gene54605:intron | 25.0% |
!! | TATAAAGTCGTGGATTAATT+TGG | + | chr4.3:38021969-38021988 | MS.gene54605:intron | 25.0% |
!! | TGATTTGTAACTAAAATGCA+TGG | + | chr4.3:38023436-38023455 | MS.gene54605:intron | 25.0% |
!! | TTTTACCATTTTACAACAGA+CGG | - | chr4.3:38025904-38025923 | None:intergenic | 25.0% |
!!! | AATGATTGGTTTTCATTAGA+TGG | + | chr4.3:38021770-38021789 | MS.gene54605:intron | 25.0% |
!!! | ACTCTATTTCTATTGAACAT+CGG | - | chr4.3:38021700-38021719 | None:intergenic | 25.0% |
!!! | TTTCTACATAGAGCATTTTT+AGG | - | chr4.3:38024107-38024126 | None:intergenic | 25.0% |
AAAATCATTTCTGTGCATGT+TGG | + | chr4.3:38022615-38022634 | MS.gene54605:intron | 30.0% | |
AAATATCTCTCTGATTGCAT+AGG | + | chr4.3:38024081-38024100 | MS.gene54605:intron | 30.0% | |
AAATCTGAACTTTGTATTGC+TGG | - | chr4.3:38025239-38025258 | None:intergenic | 30.0% | |
AATTTGATGTTTCAAAGGTG+AGG | + | chr4.3:38021361-38021380 | MS.gene54605:intron | 30.0% | |
AGAGAAGATACGTTGAATTA+AGG | - | chr4.3:38025696-38025715 | None:intergenic | 30.0% | |
AGATGAATTGAAGTTTCCTA+AGG | + | chr4.3:38026094-38026113 | MS.gene54605:CDS | 30.0% | |
AGTTCAGAAAACTAAATACC+TGG | - | chr4.3:38025506-38025525 | None:intergenic | 30.0% | |
ATAAAACTCCATTGTTTGGT+AGG | + | chr4.3:38022836-38022855 | MS.gene54605:intron | 30.0% | |
ATAAGAACCATAATAGCAAG+GGG | - | chr4.3:38025035-38025054 | None:intergenic | 30.0% | |
ATACCACATCACAACAATAA+TGG | - | chr4.3:38022149-38022168 | None:intergenic | 30.0% | |
ATATATCCAAAAACAGCCTT+AGG | + | chr4.3:38023071-38023090 | MS.gene54605:intron | 30.0% | |
ATTGAATTCAAAGGGAAAAG+AGG | - | chr4.3:38021392-38021411 | None:intergenic | 30.0% | |
CAACACATGATTGAATTCAA+AGG | - | chr4.3:38021401-38021420 | None:intergenic | 30.0% | |
CACAGATTTCTCTTAAGATA+AGG | - | chr4.3:38025269-38025288 | None:intergenic | 30.0% | |
CATGTCATAATTACAACAGT+TGG | - | chr4.3:38024683-38024702 | None:intergenic | 30.0% | |
CCGTCAAATATATCATTCTA+TGG | - | chr4.3:38025366-38025385 | None:intergenic | 30.0% | |
CTAAATGTACACTTTATAGC+TGG | + | chr4.3:38025184-38025203 | MS.gene54605:intron | 30.0% | |
CTATGAAAATGGAGAGTTTA+AGG | + | chr4.3:38021173-38021192 | MS.gene54605:CDS | 30.0% | |
CTCAATGAAAAAGCAAACAT+TGG | - | chr4.3:38022213-38022232 | None:intergenic | 30.0% | |
CTGTAACTTAACTCAATTGT+AGG | + | chr4.3:38023632-38023651 | MS.gene54605:intron | 30.0% | |
CTTACTTTCACATTTATGCA+TGG | - | chr4.3:38022475-38022494 | None:intergenic | 30.0% | |
GCAATCAGAGAGATATTTAA+AGG | - | chr4.3:38024079-38024098 | None:intergenic | 30.0% | |
GCTATAAAGTAAACGTTAGA+AGG | - | chr4.3:38023179-38023198 | None:intergenic | 30.0% | |
TAATTATGACATGCAAGTTC+AGG | + | chr4.3:38024690-38024709 | MS.gene54605:intron | 30.0% | |
TAGGATTGATTGAAATAGGA+GGG | + | chr4.3:38022855-38022874 | MS.gene54605:intron | 30.0% | |
TAGTATTTGGGAAAATTCAC+CGG | + | chr4.3:38023745-38023764 | MS.gene54605:intron | 30.0% | |
TATATCCAAAAACAGCCTTA+GGG | + | chr4.3:38023072-38023091 | MS.gene54605:intron | 30.0% | |
TATGCCTGTAAAGAAAAGTA+GGG | + | chr4.3:38023793-38023812 | MS.gene54605:intron | 30.0% | |
TCATCCTCAAATATGATACA+GGG | + | chr4.3:38022789-38022808 | MS.gene54605:intron | 30.0% | |
TGTTACAAAACATGCATACA+TGG | + | chr4.3:38021744-38021763 | MS.gene54605:intron | 30.0% | |
TTATTGTTACGAGGAATGTT+AGG | + | chr4.3:38022177-38022196 | MS.gene54605:intron | 30.0% | |
TTCATTGAGTGAAATTTACG+TGG | + | chr4.3:38022224-38022243 | MS.gene54605:intron | 30.0% | |
TTCTATAGGCTATAGTTCTT+CGG | - | chr4.3:38025667-38025686 | None:intergenic | 30.0% | |
TTGGATATGGGGATTATTAT+GGG | + | chr4.3:38021210-38021229 | MS.gene54605:CDS | 30.0% | |
TTGGTAGGATTGATTGAAAT+AGG | + | chr4.3:38022851-38022870 | MS.gene54605:intron | 30.0% | |
TTGTTCTTCAAAGTTCAAAG+AGG | - | chr4.3:38023467-38023486 | None:intergenic | 30.0% | |
TTTGGATATGGGGATTATTA+TGG | + | chr4.3:38021209-38021228 | MS.gene54605:CDS | 30.0% | |
! | ATGGTAAAATTTTATGCGCA+CGG | + | chr4.3:38025915-38025934 | MS.gene54605:intron | 30.0% |
! | ATTTGTAGACTGCATTTTAG+AGG | + | chr4.3:38026130-38026149 | MS.gene54605:CDS | 30.0% |
! | CTTTATAGCTTTTACACTGT+AGG | + | chr4.3:38023190-38023209 | MS.gene54605:intron | 30.0% |
! | GTTTAGTTTCTTGATTCACA+GGG | + | chr4.3:38023524-38023543 | MS.gene54605:intron | 30.0% |
! | TATGTTATGGACTAAGTTGA+TGG | + | chr4.3:38021852-38021871 | MS.gene54605:intron | 30.0% |
! | TGTTTAGTTTCTTGATTCAC+AGG | + | chr4.3:38023523-38023542 | MS.gene54605:intron | 30.0% |
! | TTTCTTTCTCTACTCTAAGA+AGG | - | chr4.3:38021646-38021665 | None:intergenic | 30.0% |
!! | ATTCCTGACTATTGTTTTAC+TGG | + | chr4.3:38024782-38024801 | MS.gene54605:CDS | 30.0% |
!! | TTATATACCCCTTGCTATTA+TGG | + | chr4.3:38025025-38025044 | MS.gene54605:intron | 30.0% |
!!! | GGCTGTTTTTGGATATATAA+CGG | - | chr4.3:38023069-38023088 | None:intergenic | 30.0% |
!!! | GTTAAGTCCTATGTTGATTT+TGG | + | chr4.3:38022367-38022386 | MS.gene54605:intron | 30.0% |
!!! | TATGTTTTAACCACACAGTT+TGG | - | chr4.3:38022759-38022778 | None:intergenic | 30.0% |
AAAAATGCTGCGTACATTAC+CGG | + | chr4.3:38025336-38025355 | MS.gene54605:intron | 35.0% | |
AAAGCATGATTTCTGAGTAG+GGG | - | chr4.3:38025473-38025492 | None:intergenic | 35.0% | |
AAAGGATCTGAGTATCAATG+GGG | - | chr4.3:38023577-38023596 | None:intergenic | 35.0% | |
AACTCGAGTAGAGTATGTTA+TGG | + | chr4.3:38021839-38021858 | MS.gene54605:intron | 35.0% | |
AAGGTGAGAGTTTAATCCAA+AGG | - | chr4.3:38023595-38023614 | None:intergenic | 35.0% | |
AATGACAGGGTAAAAGTTCT+AGG | - | chr4.3:38024131-38024150 | None:intergenic | 35.0% | |
AATGGCAGATAAATGAGCTT+CGG | + | chr4.3:38024747-38024766 | MS.gene54605:intron | 35.0% | |
AATTACAGTATAAAGACGGG+AGG | - | chr4.3:38024356-38024375 | None:intergenic | 35.0% | |
ACAAGAGTAATTACCTCAAC+CGG | - | chr4.3:38023416-38023435 | None:intergenic | 35.0% | |
ACATCATAACATACTAGCAC+AGG | + | chr4.3:38024877-38024896 | MS.gene54605:CDS | 35.0% | |
AGTATTTGGGAAAATTCACC+GGG | + | chr4.3:38023746-38023765 | MS.gene54605:intron | 35.0% | |
AGTGATATTCTTCCAAGCAA+AGG | - | chr4.3:38025622-38025641 | None:intergenic | 35.0% | |
ATATGGGGATTATTATGGGT+GGG | + | chr4.3:38021214-38021233 | MS.gene54605:CDS | 35.0% | |
ATTACAGTATAAAGACGGGA+GGG | - | chr4.3:38024355-38024374 | None:intergenic | 35.0% | |
ATTTGTTTGGTTGCAACAGT+TGG | + | chr4.3:38024173-38024192 | MS.gene54605:intron | 35.0% | |
CAAAGCATGATTTCTGAGTA+GGG | - | chr4.3:38025474-38025493 | None:intergenic | 35.0% | |
CAAAGGATCTGAGTATCAAT+GGG | - | chr4.3:38023578-38023597 | None:intergenic | 35.0% | |
CAATCAATCCTACCAAACAA+TGG | - | chr4.3:38022847-38022866 | None:intergenic | 35.0% | |
CCAAAAGCTAACTGATAAAC+TGG | - | chr4.3:38026213-38026232 | None:intergenic | 35.0% | |
CCATACCCCATATATTGTAT+AGG | - | chr4.3:38025860-38025879 | None:intergenic | 35.0% | |
CCTATACAATATATGGGGTA+TGG | + | chr4.3:38025857-38025876 | MS.gene54605:intron | 35.0% | |
CTTGATCGGATAAGATCTAA+AGG | + | chr4.3:38024572-38024591 | MS.gene54605:CDS | 35.0% | |
CTTTAGATCTTATCCGATCA+AGG | - | chr4.3:38024574-38024593 | None:intergenic | 35.0% | |
GCAGTTTGAGCAAAAAGTAA+CGG | + | chr4.3:38023768-38023787 | MS.gene54605:intron | 35.0% | |
GGCATAACCAAAATCAACAT+AGG | - | chr4.3:38022377-38022396 | None:intergenic | 35.0% | |
GTAGGATTGATTGAAATAGG+AGG | + | chr4.3:38022854-38022873 | MS.gene54605:intron | 35.0% | |
GTATGCCTGTAAAGAAAAGT+AGG | + | chr4.3:38023792-38023811 | MS.gene54605:intron | 35.0% | |
GTATGTTATGATGTGGATCA+TGG | - | chr4.3:38024871-38024890 | None:intergenic | 35.0% | |
GTCATCCTCAAATATGATAC+AGG | + | chr4.3:38022788-38022807 | MS.gene54605:intron | 35.0% | |
GTTCTTCGGTCATTCAAAAT+AGG | - | chr4.3:38025596-38025615 | None:intergenic | 35.0% | |
TACACAGTCAGCTACAAAAT+CGG | - | chr4.3:38021565-38021584 | None:intergenic | 35.0% | |
TACATGCATGTTTGGATTTG+CGG | - | chr4.3:38022705-38022724 | None:intergenic | 35.0% | |
TAGCCATTATTGTTGTGATG+TGG | + | chr4.3:38022143-38022162 | MS.gene54605:intron | 35.0% | |
TATATCATTCTATGGTGCAC+CGG | - | chr4.3:38025358-38025377 | None:intergenic | 35.0% | |
TCAACCCTGTATCATATTTG+AGG | - | chr4.3:38022796-38022815 | None:intergenic | 35.0% | |
TCAGGATTTGTCACAGAATA+GGG | - | chr4.3:38024220-38024239 | None:intergenic | 35.0% | |
TGAAAATGAATATGCACCGA+CGG | - | chr4.3:38021816-38021835 | None:intergenic | 35.0% | |
TGAGTAAAATGATTATGGGG+TGG | + | chr4.3:38023135-38023154 | MS.gene54605:intron | 35.0% | |
TGCATACATGGCAAAATGAT+TGG | + | chr4.3:38021756-38021775 | MS.gene54605:intron | 35.0% | |
TGGATCTCACAACTTTATGT+GGG | + | chr4.3:38022244-38022263 | MS.gene54605:intron | 35.0% | |
TGTAAAGAAAAGTAGGGTGA+GGG | + | chr4.3:38023799-38023818 | MS.gene54605:intron | 35.0% | |
TGTGCTAGTATGTTATGATG+TGG | - | chr4.3:38024878-38024897 | None:intergenic | 35.0% | |
TGTTGAACTGAAACTGGAAA+TGG | + | chr4.3:38024264-38024283 | MS.gene54605:intron | 35.0% | |
TTCGGTAACAGTAATTGATG+TGG | - | chr4.3:38021424-38021443 | None:intergenic | 35.0% | |
TTCTTCAAAGTTCAAAGAGG+AGG | - | chr4.3:38023464-38023483 | None:intergenic | 35.0% | |
TTCTTCTCTTCCAGTTTGAA+TGG | + | chr4.3:38022934-38022953 | MS.gene54605:intron | 35.0% | |
TTGTTGGGAAAAAATACGTC+AGG | + | chr4.3:38025415-38025434 | MS.gene54605:CDS | 35.0% | |
TTTCTCCATTCCATTCAAAC+TGG | - | chr4.3:38022947-38022966 | None:intergenic | 35.0% | |
! | AAAGTCGTGGATTAATTTGG+TGG | + | chr4.3:38021972-38021991 | MS.gene54605:intron | 35.0% |
! | AATCGGTGGTTTACTTGTTA+AGG | - | chr4.3:38021548-38021567 | None:intergenic | 35.0% |
! | ATTTTGTAGCTGACTGTGTA+AGG | + | chr4.3:38021565-38021584 | MS.gene54605:intron | 35.0% |
! | CGGTTTCTGACATTTTTGAA+TGG | + | chr4.3:38024729-38024748 | MS.gene54605:intron | 35.0% |
! | GAGTTTGCTTAGAAAGGATT+TGG | + | chr4.3:38021236-38021255 | MS.gene54605:CDS | 35.0% |
! | TTATTCCAGTTTTTCTTGGC+TGG | - | chr4.3:38023353-38023372 | None:intergenic | 35.0% |
!! | AAGCAGGGTATTGAATAGAA+TGG | - | chr4.3:38022914-38022933 | None:intergenic | 35.0% |
!! | AATGGGAGGTGTAAAGATTT+TGG | + | chr4.3:38021309-38021328 | MS.gene54605:CDS | 35.0% |
!! | ACTATTGTTTTACTGGTGGA+GGG | + | chr4.3:38024789-38024808 | MS.gene54605:CDS | 35.0% |
!! | AGGTTGGTTAAGGTTGATAA+TGG | + | chr4.3:38021291-38021310 | MS.gene54605:CDS | 35.0% |
!! | GGTCAGTTTCTTTTGTTTGA+AGG | + | chr4.3:38026055-38026074 | MS.gene54605:intron | 35.0% |
!! | GGTTGGTTAAGGTTGATAAT+GGG | + | chr4.3:38021292-38021311 | MS.gene54605:CDS | 35.0% |
!!! | CCAGTTTATCAGTTAGCTTT+TGG | + | chr4.3:38026210-38026229 | MS.gene54605:CDS | 35.0% |
!!! | GTTTATCAGTTAGCTTTTGG+TGG | + | chr4.3:38026213-38026232 | MS.gene54605:CDS | 35.0% |
AACATGATTTAACTCTGGGC+AGG | - | chr4.3:38025007-38025026 | None:intergenic | 40.0% | |
AACTGGAAGAGAAGAAAAGC+AGG | - | chr4.3:38022930-38022949 | None:intergenic | 40.0% | |
AATTCCAAGTCTTGCACCTT+AGG | - | chr4.3:38026113-38026132 | None:intergenic | 40.0% | |
ACAGGGAAAAACAGATAGCT+GGG | + | chr4.3:38023541-38023560 | MS.gene54605:intron | 40.0% | |
ACATGATTTAACTCTGGGCA+GGG | - | chr4.3:38025006-38025025 | None:intergenic | 40.0% | |
ACTGGAAGAGAAGAAAAGCA+GGG | - | chr4.3:38022929-38022948 | None:intergenic | 40.0% | |
AGAAGAAAAGGGTAAGTGTG+CGG | + | chr4.3:38024477-38024496 | MS.gene54605:intron | 40.0% | |
AGATCTCTCAATGCTTGGTT+TGG | + | chr4.3:38024818-38024837 | MS.gene54605:CDS | 40.0% | |
AGCGATATTCTTCCAAGCAA+AGG | - | chr4.3:38025565-38025584 | None:intergenic | 40.0% | |
AGCTAAGATCTCTCAATGCT+TGG | + | chr4.3:38024813-38024832 | MS.gene54605:CDS | 40.0% | |
AGGATTTGTCACAGAATAGG+GGG | - | chr4.3:38024218-38024237 | None:intergenic | 40.0% | |
ATGTCAAAGTCCAAACTGTG+TGG | + | chr4.3:38022746-38022765 | MS.gene54605:intron | 40.0% | |
CACTTGACAGATGAATGACA+GGG | - | chr4.3:38024144-38024163 | None:intergenic | 40.0% | |
CAGAAAACTAAATACCTGGC+TGG | - | chr4.3:38025502-38025521 | None:intergenic | 40.0% | |
CAGGATTTGTCACAGAATAG+GGG | - | chr4.3:38024219-38024238 | None:intergenic | 40.0% | |
CCAAAGGATCTGAGTATCAA+TGG | - | chr4.3:38023579-38023598 | None:intergenic | 40.0% | |
CCAAGTTGTTGAACTGAAAC+TGG | + | chr4.3:38024258-38024277 | MS.gene54605:intron | 40.0% | |
CCACCAGTAAAACAATAGTC+AGG | - | chr4.3:38024788-38024807 | None:intergenic | 40.0% | |
CCAGTTTCAGTTCAACAACT+TGG | - | chr4.3:38024261-38024280 | None:intergenic | 40.0% | |
CCATTGATACTCAGATCCTT+TGG | + | chr4.3:38023576-38023595 | MS.gene54605:intron | 40.0% | |
CGAAAGGGGATTTATTAGAG+TGG | - | chr4.3:38023032-38023051 | None:intergenic | 40.0% | |
CGGTGAGTTTGAGAAAATCA+CGG | - | chr4.3:38022685-38022704 | None:intergenic | 40.0% | |
CTCTTCCAGTTTGAATGGAA+TGG | + | chr4.3:38022939-38022958 | MS.gene54605:intron | 40.0% | |
CTGTAAAGAAAAGTAGGGTG+AGG | + | chr4.3:38023798-38023817 | MS.gene54605:intron | 40.0% | |
CTTCCTGAAAGATCATTACC+TGG | + | chr4.3:38023286-38023305 | MS.gene54605:CDS | 40.0% | |
GAAATAGGAGGGAAAAGAGT+GGG | + | chr4.3:38022866-38022885 | MS.gene54605:intron | 40.0% | |
GAATTCAAAGGGAAAAGAGG+AGG | - | chr4.3:38021389-38021408 | None:intergenic | 40.0% | |
GACAACTGTGCTTTCGTATT+CGG | - | chr4.3:38021442-38021461 | None:intergenic | 40.0% | |
GATATGGGGATTATTATGGG+TGG | + | chr4.3:38021213-38021232 | MS.gene54605:CDS | 40.0% | |
GATTACTTGCAAAGAGTTGC+TGG | + | chr4.3:38023377-38023396 | MS.gene54605:CDS | 40.0% | |
GCAAAGCATGATTTCTGAGT+AGG | - | chr4.3:38025475-38025494 | None:intergenic | 40.0% | |
GGATCTCACAACTTTATGTG+GGG | + | chr4.3:38022245-38022264 | MS.gene54605:intron | 40.0% | |
GTCAGGATTTGTCACAGAAT+AGG | - | chr4.3:38024221-38024240 | None:intergenic | 40.0% | |
GTGGATCTCACAACTTTATG+TGG | + | chr4.3:38022243-38022262 | MS.gene54605:intron | 40.0% | |
GTGTGTGAAACTGAACGAAA+GGG | - | chr4.3:38023047-38023066 | None:intergenic | 40.0% | |
GTTTCAGTTCAACAACTTGG+TGG | - | chr4.3:38024258-38024277 | None:intergenic | 40.0% | |
TCACTTGACAGATGAATGAC+AGG | - | chr4.3:38024145-38024164 | None:intergenic | 40.0% | |
TGAAATAGGAGGGAAAAGAG+TGG | + | chr4.3:38022865-38022884 | MS.gene54605:intron | 40.0% | |
TGAGTTTGAGAAAATCACGG+TGG | - | chr4.3:38022682-38022701 | None:intergenic | 40.0% | |
TGATGTGGATCATGGTGTAA+TGG | - | chr4.3:38024863-38024882 | None:intergenic | 40.0% | |
TGGCTAAAACAGAATCTGTC+AGG | - | chr4.3:38024238-38024257 | None:intergenic | 40.0% | |
TGTGTGAAACTGAACGAAAG+GGG | - | chr4.3:38023046-38023065 | None:intergenic | 40.0% | |
TGTTATATATCCCGCCAAAG+TGG | + | chr4.3:38026162-38026181 | MS.gene54605:CDS | 40.0% | |
TTACACACCTATACATGCAG+AGG | - | chr4.3:38025770-38025789 | None:intergenic | 40.0% | |
TTACAGTATAAAGACGGGAG+GGG | - | chr4.3:38024354-38024373 | None:intergenic | 40.0% | |
TTATCCAGCATCTTTGTCTG+AGG | + | chr4.3:38025440-38025459 | MS.gene54605:CDS | 40.0% | |
TTCTGCTGTTGTGAAGGTTT+CGG | + | chr4.3:38021260-38021279 | MS.gene54605:CDS | 40.0% | |
TTCTGTGCATGTTGGAATCA+CGG | + | chr4.3:38022623-38022642 | MS.gene54605:intron | 40.0% | |
TTTCACACTTCCAGGTTGTT+GGG | + | chr4.3:38025400-38025419 | MS.gene54605:intron | 40.0% | |
TTTCTCTCCTCTGCATGTAT+AGG | + | chr4.3:38025760-38025779 | MS.gene54605:intron | 40.0% | |
TTTGGATTCTGCTGTTGTGA+AGG | + | chr4.3:38021254-38021273 | MS.gene54605:CDS | 40.0% | |
! | AAATCTGTCTTCGTGTTGAC+TGG | + | chr4.3:38026034-38026053 | MS.gene54605:intron | 40.0% |
! | AGATCTAAAGGCTTTTCTCC+TGG | + | chr4.3:38024584-38024603 | MS.gene54605:CDS | 40.0% |
! | ATAGGGAAGAAGCATGAATC+TGG | - | chr4.3:38025144-38025163 | None:intergenic | 40.0% |
! | CAGGACTTTTACTGCTCTTT+CGG | + | chr4.3:38024709-38024728 | MS.gene54605:intron | 40.0% |
! | CCAACACTCACTCTTTTGTT+GGG | - | chr4.3:38022286-38022305 | None:intergenic | 40.0% |
! | CGTTTTCTGAGTTCCTTGAT+CGG | + | chr4.3:38024558-38024577 | MS.gene54605:CDS | 40.0% |
! | GAATACGAAAGCACAGTTGT+CGG | + | chr4.3:38021441-38021460 | MS.gene54605:intron | 40.0% |
! | TCAGCATCCCTTATTTGATC+AGG | + | chr4.3:38024625-38024644 | MS.gene54605:CDS | 40.0% |
! | TCCAACACTCACTCTTTTGT+TGG | - | chr4.3:38022287-38022306 | None:intergenic | 40.0% |
! | TTTGAAGCAAGGGACTTAAC+AGG | - | chr4.3:38023230-38023249 | None:intergenic | 40.0% |
!! | ACAGGGTTGATGAAATGACA+TGG | + | chr4.3:38022806-38022825 | MS.gene54605:intron | 40.0% |
!! | AGAGTTTAAGGAAGCGCTTA+GGG | + | chr4.3:38021185-38021204 | MS.gene54605:CDS | 40.0% |
!! | ATGTCTTGTTTCACACTTCC+AGG | + | chr4.3:38025392-38025411 | MS.gene54605:intron | 40.0% |
!! | CACTACAAGCTTTGAAGCAA+GGG | - | chr4.3:38023240-38023259 | None:intergenic | 40.0% |
!! | CCTGACTATTGTTTTACTGG+TGG | + | chr4.3:38024785-38024804 | MS.gene54605:CDS | 40.0% |
!! | CTATTGTTTTACTGGTGGAG+GGG | + | chr4.3:38024790-38024809 | MS.gene54605:CDS | 40.0% |
!! | CTCACCCTACTTTTCTTTAC+AGG | - | chr4.3:38023800-38023819 | None:intergenic | 40.0% |
!! | GACTATTGTTTTACTGGTGG+AGG | + | chr4.3:38024788-38024807 | MS.gene54605:CDS | 40.0% |
!! | GCGAAGTGTTGCTATGAAAA+TGG | + | chr4.3:38021162-38021181 | MS.gene54605:CDS | 40.0% |
!! | GTAGACTGCATTTTAGAGGA+AGG | + | chr4.3:38026134-38026153 | MS.gene54605:CDS | 40.0% |
!! | TACTTTTTGCTCAAACTGCC+CGG | - | chr4.3:38023767-38023786 | None:intergenic | 40.0% |
!! | TCACTACAAGCTTTGAAGCA+AGG | - | chr4.3:38023241-38023260 | None:intergenic | 40.0% |
!! | TGGACTAAGTTGATGGTAAG+TGG | + | chr4.3:38021859-38021878 | MS.gene54605:intron | 40.0% |
!! | TGGTTAAGGTTGATAATGGG+AGG | + | chr4.3:38021295-38021314 | MS.gene54605:CDS | 40.0% |
!!! | CGTATTTTTTCCCAACAACC+TGG | - | chr4.3:38025413-38025432 | None:intergenic | 40.0% |
AAGTTGGACTCATGGGAGTA+TGG | - | chr4.3:38025101-38025120 | None:intergenic | 45.0% | |
ACACTTTATAGCTGGCAACC+TGG | + | chr4.3:38025192-38025211 | MS.gene54605:intron | 45.0% | |
ACAGTCAGCTACAAAATCGG+TGG | - | chr4.3:38021562-38021581 | None:intergenic | 45.0% | |
AGTTATCATCAGCGACTGCA+TGG | + | chr4.3:38023319-38023338 | MS.gene54605:CDS | 45.0% | |
AGTTCCTCAGACAAAGATGC+TGG | - | chr4.3:38025447-38025466 | None:intergenic | 45.0% | |
ATGCAGTCGCTGATGATAAC+TGG | - | chr4.3:38023320-38023339 | None:intergenic | 45.0% | |
ATTTGTCACAGAATAGGGGG+AGG | - | chr4.3:38024215-38024234 | None:intergenic | 45.0% | |
CAAGCAAAGGCTTAAGCAGA+CGG | - | chr4.3:38025552-38025571 | None:intergenic | 45.0% | |
CACAGGGAAAAACAGATAGC+TGG | + | chr4.3:38023540-38023559 | MS.gene54605:intron | 45.0% | |
CAGCCAGGTAATGATCTTTC+AGG | - | chr4.3:38023292-38023311 | None:intergenic | 45.0% | |
CCCAACAAAAGAGTGAGTGT+TGG | + | chr4.3:38022283-38022302 | MS.gene54605:intron | 45.0% | |
CGACTCCGTCTGTTGTAAAA+TGG | + | chr4.3:38025896-38025915 | MS.gene54605:intron | 45.0% | |
CTGAAAGATCATTACCTGGC+TGG | + | chr4.3:38023290-38023309 | MS.gene54605:CDS | 45.0% | |
GGATGCTGAGCAAGATATGT+AGG | - | chr4.3:38024614-38024633 | None:intergenic | 45.0% | |
GGGAAAAGAGTGGGATATGA+TGG | + | chr4.3:38022875-38022894 | MS.gene54605:intron | 45.0% | |
GGGACTTAACAGGCAAAAGT+TGG | - | chr4.3:38023220-38023239 | None:intergenic | 45.0% | |
GGTGTGTGAAACTGAACGAA+AGG | - | chr4.3:38023048-38023067 | None:intergenic | 45.0% | |
GTAACAGTACTTGCCGAAGT+TGG | - | chr4.3:38025117-38025136 | None:intergenic | 45.0% | |
GTTTCACACTTCCAGGTTGT+TGG | + | chr4.3:38025399-38025418 | MS.gene54605:intron | 45.0% | |
GTTTCCTAAGGTGCAAGACT+TGG | + | chr4.3:38026106-38026125 | MS.gene54605:CDS | 45.0% | |
TACATCAACTATGCCATGCC+AGG | - | chr4.3:38025213-38025232 | None:intergenic | 45.0% | |
TACTCCCATGAGTCCAACTT+CGG | + | chr4.3:38025101-38025120 | MS.gene54605:intron | 45.0% | |
TATATATCCCGCCAAAGTGG+TGG | + | chr4.3:38026165-38026184 | MS.gene54605:CDS | 45.0% | |
TTTGTCACAGAATAGGGGGA+GGG | - | chr4.3:38024214-38024233 | None:intergenic | 45.0% | |
! | AGTTGGACTCATGGGAGTAT+GGG | - | chr4.3:38025100-38025119 | None:intergenic | 45.0% |
! | CCAAGCAAAGGCTTGTTCTT+CGG | - | chr4.3:38025610-38025629 | None:intergenic | 45.0% |
! | GAAGAAGCATGAATCTGGCT+CGG | - | chr4.3:38025139-38025158 | None:intergenic | 45.0% |
! | TCTAAAGGCTTTTCTCCTGG+TGG | + | chr4.3:38024587-38024606 | MS.gene54605:CDS | 45.0% |
! | TTTTACAACAGACGGAGTCG+TGG | - | chr4.3:38025896-38025915 | None:intergenic | 45.0% |
!! | AAGCAAAGAAGAGCACCCTA+AGG | - | chr4.3:38023090-38023109 | None:intergenic | 45.0% |
!! | GAGAGTTTAAGGAAGCGCTT+AGG | + | chr4.3:38021184-38021203 | MS.gene54605:CDS | 45.0% |
!! | GGGAGGTGTAAAGATTTTGG+TGG | + | chr4.3:38021312-38021331 | MS.gene54605:CDS | 45.0% |
!! | TGTGTAAGGCGTTGTGAGAT+AGG | + | chr4.3:38021579-38021598 | MS.gene54605:intron | 45.0% |
!!! | AGTTAGCTTTTGGTGGAGTG+AGG | + | chr4.3:38026220-38026239 | MS.gene54605:CDS | 45.0% |
!!! | GTTAGCTTTTGGTGGAGTGA+GGG | + | chr4.3:38026221-38026240 | MS.gene54605:CDS | 45.0% |
!! | AGTATATATTAATTAAAAAA+AGG | - | chr4.3:38022004-38022023 | None:intergenic | 5.0% |
AAGTGTGCGGCATTCTTTGC+AGG | + | chr4.3:38024490-38024509 | MS.gene54605:intron | 50.0% | |
AATGGCGTTACAGTTCCAGC+TGG | - | chr4.3:38024845-38024864 | None:intergenic | 50.0% | |
ACATAGTGCCACCACTTTGG+CGG | - | chr4.3:38026176-38026195 | None:intergenic | 50.0% | |
ACTGGCCAGCCAAGAAAAAC+TGG | + | chr4.3:38023345-38023364 | MS.gene54605:CDS | 50.0% | |
ACTTGCCGAAGTTGGACTCA+TGG | - | chr4.3:38025109-38025128 | None:intergenic | 50.0% | |
CAGGAAGTTCTCCAGTGACA+AGG | - | chr4.3:38023273-38023292 | None:intergenic | 50.0% | |
CATCTCACGAACTGCTTCTG+CGG | - | chr4.3:38021058-38021077 | None:intergenic | 50.0% | |
CATGCTTTGCAATTCCAGCC+AGG | + | chr4.3:38025485-38025504 | MS.gene54605:CDS | 50.0% | |
CCGAAGAACAAGCCTTTGCT+TGG | + | chr4.3:38025607-38025626 | MS.gene54605:intron | 50.0% | |
CGTCTGCTTAAGCCTTTGCT+TGG | + | chr4.3:38025550-38025569 | MS.gene54605:intron | 50.0% | |
CTTGCCGAAGTTGGACTCAT+GGG | - | chr4.3:38025108-38025127 | None:intergenic | 50.0% | |
GAAGAGATCTGCCTTGTCAC+TGG | + | chr4.3:38023259-38023278 | MS.gene54605:CDS | 50.0% | |
GCAAGATATGTAGGACCACC+AGG | - | chr4.3:38024605-38024624 | None:intergenic | 50.0% | |
TGAAGGTTTCGGAGAAAGCG+AGG | + | chr4.3:38021271-38021290 | MS.gene54605:CDS | 50.0% | |
TGCGGCATTCTTTGCAGGTT+GGG | + | chr4.3:38024495-38024514 | MS.gene54605:intron | 50.0% | |
TGTGCATGTTGGAATCACGG+TGG | + | chr4.3:38022626-38022645 | MS.gene54605:intron | 50.0% | |
TGTTTCGAGAGAGTCGCTGA+TGG | - | chr4.3:38020929-38020948 | None:intergenic | 50.0% | |
TTAAACACTCACCTCGCCCT+AGG | + | chr4.3:38024980-38024999 | MS.gene54605:intron | 50.0% | |
TTACCTCAACCGGAACAGTG+CGG | - | chr4.3:38023406-38023425 | None:intergenic | 50.0% | |
TTATAGCTGGCAACCTGGCA+TGG | + | chr4.3:38025197-38025216 | MS.gene54605:intron | 50.0% | |
TTGTCACAGAATAGGGGGAG+GGG | - | chr4.3:38024213-38024232 | None:intergenic | 50.0% | |
! | GGAGAAAGCGAGGTTGGTTA+AGG | + | chr4.3:38021281-38021300 | MS.gene54605:CDS | 50.0% |
! | GGGTGGGAGTTTGCTTAGAA+AGG | + | chr4.3:38021230-38021249 | MS.gene54605:CDS | 50.0% |
!! | AATGCTTGGTTTGGTCCAGC+TGG | + | chr4.3:38024827-38024846 | MS.gene54605:CDS | 50.0% |
!! | AGCGCTTAGGGCTTTGGATA+TGG | + | chr4.3:38021197-38021216 | MS.gene54605:CDS | 50.0% |
!! | CGCTTAGGGCTTTGGATATG+GGG | + | chr4.3:38021199-38021218 | MS.gene54605:CDS | 50.0% |
!! | GAGCACCCTAAGGCTGTTTT+TGG | - | chr4.3:38023080-38023099 | None:intergenic | 50.0% |
!! | GCGCTTAGGGCTTTGGATAT+GGG | + | chr4.3:38021198-38021217 | MS.gene54605:CDS | 50.0% |
!! | GGGAGCATCCTATAAAGTCG+TGG | + | chr4.3:38021959-38021978 | MS.gene54605:intron | 50.0% |
!! | TAAGGAAGCGCTTAGGGCTT+TGG | + | chr4.3:38021191-38021210 | MS.gene54605:CDS | 50.0% |
AAGCAGTTCGTGAGATGGCG+TGG | + | chr4.3:38021061-38021080 | MS.gene54605:CDS | 55.0% | |
AGCAGTTCGTGAGATGGCGT+GGG | + | chr4.3:38021062-38021081 | MS.gene54605:CDS | 55.0% | |
CAGTATAAAGACGGGAGGGG+AGG | - | chr4.3:38024351-38024370 | None:intergenic | 55.0% | |
CATAGTGCCACCACTTTGGC+GGG | - | chr4.3:38026175-38026194 | None:intergenic | 55.0% | |
CGCACATAGTGCCACCACTT+TGG | - | chr4.3:38026179-38026198 | None:intergenic | 55.0% | |
CGCAGAAGCAGTTCGTGAGA+TGG | + | chr4.3:38021056-38021075 | MS.gene54605:CDS | 55.0% | |
CTCCACTCCATCTCATCCCA+CGG | + | chr4.3:38020979-38020998 | MS.gene54605:CDS | 55.0% | |
GGTTTCGGAGAAAGCGAGGT+TGG | + | chr4.3:38021275-38021294 | MS.gene54605:CDS | 55.0% | |
GTGCGGCATTCTTTGCAGGT+TGG | + | chr4.3:38024494-38024513 | MS.gene54605:intron | 55.0% | |
TGAGATGGAGTGGAGGAGTG+TGG | - | chr4.3:38020974-38020993 | None:intergenic | 55.0% | |
TGATAACTGGAGAGCCAGCC+AGG | - | chr4.3:38023307-38023326 | None:intergenic | 55.0% | |
TTAACTCTGGGCAGGGCCTA+GGG | - | chr4.3:38024999-38025018 | None:intergenic | 55.0% | |
TTTAACTCTGGGCAGGGCCT+AGG | - | chr4.3:38025000-38025019 | None:intergenic | 55.0% | |
! | AGAGTCGCTGATGGATGAGG+TGG | - | chr4.3:38020920-38020939 | None:intergenic | 55.0% |
! | GAGAGAGTCGCTGATGGATG+AGG | - | chr4.3:38020923-38020942 | None:intergenic | 55.0% |
! | GAGATGGAGTGGAGGAGTGT+GGG | - | chr4.3:38020973-38020992 | None:intergenic | 55.0% |
CAACACCGAGTGCCAAGGAC+CGG | - | chr4.3:38021100-38021119 | None:intergenic | 60.0% | |
CACTCCATCTCATCCCACGG+AGG | + | chr4.3:38020982-38021001 | MS.gene54605:CDS | 60.0% | |
CGTGGGATGAGATGGAGTGG+AGG | - | chr4.3:38020981-38021000 | None:intergenic | 60.0% | |
CTCCGTGGGATGAGATGGAG+TGG | - | chr4.3:38020984-38021003 | None:intergenic | 60.0% | |
GAGGGAGGACATACGGACGT+AGG | - | chr4.3:38021013-38021032 | None:intergenic | 60.0% | |
GGAGATTCTGCGTCGAGCGT+TGG | - | chr4.3:38020952-38020971 | None:intergenic | 60.0% | |
GTAGCCTCCGTGGGATGAGA+TGG | - | chr4.3:38020989-38021008 | None:intergenic | 60.0% | |
TGACCGCACTGTTCCGGTTG+AGG | + | chr4.3:38023400-38023419 | MS.gene54605:CDS | 60.0% | |
TGCTGGTGACCGCACTGTTC+CGG | + | chr4.3:38023394-38023413 | MS.gene54605:CDS | 60.0% | |
!! | TCCTTGGCACTCGGTGTTGC+CGG | + | chr4.3:38021101-38021120 | MS.gene54605:CDS | 60.0% |
ACCGGCAACACCGAGTGCCA+AGG | - | chr4.3:38021105-38021124 | None:intergenic | 65.0% | |
AGCAGCTGCACTCCGGTCCT+TGG | + | chr4.3:38021085-38021104 | MS.gene54605:CDS | 65.0% | |
GACGTAGGCGTAGCCTCCGT+GGG | - | chr4.3:38020998-38021017 | None:intergenic | 65.0% | |
GAGTACGCGTCACGCCACAC+CGG | - | chr4.3:38021123-38021142 | None:intergenic | 65.0% | |
GCACTCCGGTCCTTGGCACT+CGG | + | chr4.3:38021092-38021111 | MS.gene54605:CDS | 65.0% | |
GTGGCGTGACGCGTACTCGA+TGG | + | chr4.3:38021125-38021144 | MS.gene54605:CDS | 65.0% | |
TCAGCGACTGCATGGCGCAC+TGG | + | chr4.3:38023327-38023346 | MS.gene54605:CDS | 65.0% | |
TTCTGCGGCGCGAATGTCGC+CGG | - | chr4.3:38021043-38021062 | None:intergenic | 65.0% | |
CGGCGGCGAGGGAGGACATA+CGG | - | chr4.3:38021020-38021039 | None:intergenic | 70.0% | |
GCGTGGGAGCAGCTGCACTC+CGG | + | chr4.3:38021078-38021097 | MS.gene54605:CDS | 70.0% | |
GGACGTAGGCGTAGCCTCCG+TGG | - | chr4.3:38020999-38021018 | None:intergenic | 70.0% | |
!! | GGCACTCGGTGTTGCCGGTG+TGG | + | chr4.3:38021106-38021125 | MS.gene54605:CDS | 70.0% |
AATGTCGCCGGCGGCGGCGA+GGG | - | chr4.3:38021031-38021050 | None:intergenic | 75.0% | |
ATGTCCTCCCTCGCCGCCGC+CGG | + | chr4.3:38021021-38021040 | MS.gene54605:CDS | 75.0% | |
TCTGGGCAGGGCCTAGGGCG+AGG | - | chr4.3:38024994-38025013 | None:intergenic | 75.0% | |
TGCGGCGCGAATGTCGCCGG+CGG | - | chr4.3:38021040-38021059 | None:intergenic | 75.0% | |
! | GAATGTCGCCGGCGGCGGCG+AGG | - | chr4.3:38021032-38021051 | None:intergenic | 80.0% |
! | GGCGCGAATGTCGCCGGCGG+CGG | - | chr4.3:38021037-38021056 | None:intergenic | 80.0% |
! | GTCGCCGGCGGCGGCGAGGG+AGG | - | chr4.3:38021028-38021047 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 38020907 | 38026265 | 38020907 | ID=MS.gene54605 |
chr4.3 | mRNA | 38020907 | 38026265 | 38020907 | ID=MS.gene54605.t1;Parent=MS.gene54605 |
chr4.3 | exon | 38020907 | 38021377 | 38020907 | ID=MS.gene54605.t1.exon1;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38020907 | 38021377 | 38020907 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
chr4.3 | exon | 38023212 | 38023421 | 38023212 | ID=MS.gene54605.t1.exon2;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38023212 | 38023421 | 38023212 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
chr4.3 | exon | 38024512 | 38024646 | 38024512 | ID=MS.gene54605.t1.exon3;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38024512 | 38024646 | 38024512 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
chr4.3 | exon | 38024755 | 38024898 | 38024755 | ID=MS.gene54605.t1.exon4;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38024755 | 38024898 | 38024755 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
chr4.3 | exon | 38025414 | 38025506 | 38025414 | ID=MS.gene54605.t1.exon5;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38025414 | 38025506 | 38025414 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
chr4.3 | exon | 38026077 | 38026265 | 38026077 | ID=MS.gene54605.t1.exon6;Parent=MS.gene54605.t1 |
chr4.3 | CDS | 38026077 | 38026265 | 38026077 | ID=cds.MS.gene54605.t1;Parent=MS.gene54605.t1 |
Gene Sequence |
Protein sequence |