Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056338.t1 | XP_013456231.1 | 96.9 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 6.50E-236 | 826.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056338.t1 | Q8RWR1 | 70.1 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 4.5e-169 | 595.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056338.t1 | A0A072UKM1 | 96.9 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 4.7e-236 | 826.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053509 | MS.gene056338 | 0.824169 | 9.33E-54 | -1.69E-46 |
MS.gene056338 | MS.gene45192 | -0.849238 | 3.68E-60 | -1.69E-46 |
MS.gene056338 | MS.gene45593 | 0.815562 | 8.68E-52 | -1.69E-46 |
MS.gene056338 | MS.gene45595 | 0.808867 | 2.51E-50 | -1.69E-46 |
MS.gene056338 | MS.gene54605 | 0.94067 | 1.57E-100 | -1.69E-46 |
MS.gene056338 | MS.gene54974 | 0.804545 | 2.05E-49 | -1.69E-46 |
MS.gene056338 | MS.gene59440 | -0.835615 | 1.51E-56 | -1.69E-46 |
MS.gene056338 | MS.gene64738 | -0.823355 | 1.45E-53 | -1.69E-46 |
MS.gene056338 | MS.gene65812 | -0.814596 | 1.42E-51 | -1.69E-46 |
MS.gene056338 | MS.gene68034 | -0.824886 | 6.33E-54 | -1.69E-46 |
MS.gene056338 | MS.gene81017 | 0.815779 | 7.76E-52 | -1.69E-46 |
MS.gene056338 | MS.gene95023 | 0.905188 | 5.59E-80 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056338.t1 | MTR_4g066020 | 96.852 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 0.0 | 829 |
MS.gene056338.t1 | MTR_1g071300 | 38.312 | 154 | 79 | 6 | 263 | 404 | 138 | 287 | 1.58e-21 | 97.1 |
MS.gene056338.t1 | MTR_1g071300 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 1.60e-21 | 97.1 |
MS.gene056338.t1 | MTR_1g071300 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 2.26e-21 | 96.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056338.t1 | AT3G20810 | 71.981 | 414 | 109 | 4 | 4 | 411 | 5 | 417 | 0.0 | 608 |
MS.gene056338.t1 | AT3G20810 | 70.118 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 0.0 | 600 |
MS.gene056338.t1 | AT3G20810 | 71.320 | 394 | 107 | 3 | 4 | 392 | 5 | 397 | 0.0 | 579 |
MS.gene056338.t1 | AT3G20810 | 69.113 | 327 | 95 | 3 | 4 | 325 | 5 | 330 | 3.91e-160 | 454 |
MS.gene056338.t1 | AT3G20810 | 69.565 | 322 | 92 | 3 | 4 | 320 | 5 | 325 | 8.00e-159 | 452 |
MS.gene056338.t1 | AT5G19840 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.25e-23 | 101 |
MS.gene056338.t1 | AT5G19840 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.38e-23 | 101 |
MS.gene056338.t1 | AT3G45880 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 1.01e-11 | 66.2 |
MS.gene056338.t1 | AT3G45880 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 1.15e-11 | 66.2 |
Find 117 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGATATGGGGATTATTA+TGG | 0.186608 | 4.1:+34841054 | MS.gene056338:CDS |
GGCGCTTAGGGCTTTGGATA+TGG | 0.208142 | 4.1:+34841042 | MS.gene056338:CDS |
TTTGAATACCTGATCAAATA+AGG | 0.226160 | 4.1:-34844134 | None:intergenic |
CAGCCAGGTAATGATCTTTC+AGG | 0.278024 | 4.1:-34842796 | None:intergenic |
AATGGGAGGTGTAAAGATTT+TGG | 0.296847 | 4.1:+34841154 | MS.gene056338:CDS |
TCCTTGGCACTCGGTGTTGC+CGG | 0.319116 | 4.1:+34840946 | MS.gene056338:CDS |
CCAGTTTATCAGTTAGCTTT+TGG | 0.327040 | 4.1:+34845709 | MS.gene056338:CDS |
TAAAGAGGCGCTTAGGGCTT+TGG | 0.336994 | 4.1:+34841036 | MS.gene056338:CDS |
AGGATGGTTAAGGTTGATAA+TGG | 0.340561 | 4.1:+34841136 | MS.gene056338:CDS |
GGCGCGAATGTCGCCGGCGG+CGG | 0.341012 | 4.1:-34840879 | None:intergenic |
TTGGATATGGGGATTATTAT+GGG | 0.343770 | 4.1:+34841055 | MS.gene056338:CDS |
CCAAAAGCTAACTGATAAAC+TGG | 0.357343 | 4.1:-34845709 | None:intergenic |
CTGCATCGAGTGTTGGTGTT+TGG | 0.362357 | 4.1:-34840787 | None:intergenic |
AATTCCAAGTCTTGCACCTT+AGG | 0.363637 | 4.1:-34845609 | None:intergenic |
GAGTTTGCTTAGGAAGGATT+TGG | 0.366501 | 4.1:+34841081 | MS.gene056338:CDS |
GATTACTTGCAAAGAGTTGC+TGG | 0.375148 | 4.1:+34842884 | MS.gene056338:CDS |
GTTTCACACTTCCAGGTTGT+TGG | 0.378528 | 4.1:+34844900 | MS.gene056338:intron |
GCGAAGTGTTGCTATGAAAA+TGG | 0.381872 | 4.1:+34841007 | MS.gene056338:CDS |
AGATCTCTCAATGCTTGGTT+TGG | 0.381952 | 4.1:+34844319 | MS.gene056338:CDS |
ATGCAGTCGCTGATGATAAC+TGG | 0.382618 | 4.1:-34842824 | None:intergenic |
GCGCTTAGGGCTTTGGATAT+GGG | 0.383753 | 4.1:+34841043 | MS.gene056338:CDS |
GAGAGTTTAAAGAGGCGCTT+AGG | 0.392198 | 4.1:+34841029 | MS.gene056338:CDS |
TTTGAAGCAAGGGACTTAAC+AGG | 0.394352 | 4.1:-34842734 | None:intergenic |
AGCAGCTGCACTCCGGTCCT+TGG | 0.396639 | 4.1:+34840930 | MS.gene056338:CDS |
TTCTGCTGTTGTGAAGGTTT+CGG | 0.399127 | 4.1:+34841105 | MS.gene056338:CDS |
TTTCACACTTCCAGGTTGTT+GGG | 0.399540 | 4.1:+34844901 | MS.gene056338:intron |
TGCTGGTGACCGCACTGTTC+CGG | 0.405682 | 4.1:+34842901 | MS.gene056338:CDS |
TCAGCATCCCTTATTTGATC+AGG | 0.417700 | 4.1:+34844126 | MS.gene056338:CDS |
AAAACTATTTATGTGCAGAT+TGG | 0.423646 | 4.1:+34844020 | MS.gene056338:CDS |
AATGCTTGGTTTGGTCCAGC+TGG | 0.430502 | 4.1:+34844328 | MS.gene056338:CDS |
TTCTGCGGCGCGAATGTCGC+CGG | 0.434979 | 4.1:-34840885 | None:intergenic |
GGAGAAAGCGAGGATGGTTA+AGG | 0.436189 | 4.1:+34841126 | MS.gene056338:CDS |
ACAAGAGTAATTACCTCAAC+CGG | 0.440109 | 4.1:-34842920 | None:intergenic |
GGGTGGGAGTTTGCTTAGGA+AGG | 0.447670 | 4.1:+34841075 | MS.gene056338:CDS |
TTGAATACCTGATCAAATAA+GGG | 0.448968 | 4.1:-34844133 | None:intergenic |
TGAGATGGAGTGGAGGAGTG+TGG | 0.454775 | 4.1:-34840816 | None:intergenic |
CGCTTAGGGCTTTGGATATG+GGG | 0.455785 | 4.1:+34841044 | MS.gene056338:CDS |
CTTTAGATCTTATCCGATCA+AGG | 0.458405 | 4.1:-34844072 | None:intergenic |
CATAGTGCCACCACTTTGGC+GGG | 0.459007 | 4.1:-34845671 | None:intergenic |
AATGTCGCCGGCGGCGGCGA+GGG | 0.462687 | 4.1:-34840873 | None:intergenic |
TGATAACTGGAGAGCCAGCC+AGG | 0.466614 | 4.1:-34842811 | None:intergenic |
ATGTCCTCCCTCGCCGCCGC+CGG | 0.467944 | 4.1:+34840866 | MS.gene056338:CDS |
GAATGTCGCCGGCGGCGGCG+AGG | 0.469365 | 4.1:-34840874 | None:intergenic |
GCAAAGCATGATTTCTGAGT+AGG | 0.469422 | 4.1:-34844973 | None:intergenic |
GTTTCCTAAGGTGCAAGACT+TGG | 0.471641 | 4.1:+34845605 | MS.gene056338:CDS |
CTTGATCGGATAAGATCTAA+AGG | 0.478631 | 4.1:+34844073 | MS.gene056338:CDS |
GTCGCCGGCGGCGGCGAGGG+AGG | 0.481353 | 4.1:-34840870 | None:intergenic |
AGCTAAGATCTCTCAATGCT+TGG | 0.481715 | 4.1:+34844314 | MS.gene056338:CDS |
GAAGAGATCTGCCTTGTCAC+TGG | 0.484449 | 4.1:+34842766 | MS.gene056338:CDS |
TGACCGCACTGTTCCGGTTG+AGG | 0.485106 | 4.1:+34842907 | MS.gene056338:CDS |
GCACTCCGGTCCTTGGCACT+CGG | 0.485361 | 4.1:+34840937 | MS.gene056338:CDS |
CAAAGCATGATTTCTGAGTA+GGG | 0.486239 | 4.1:-34844972 | None:intergenic |
TTATGGGTGGGAGTTTGCTT+AGG | 0.488417 | 4.1:+34841071 | MS.gene056338:CDS |
GGATGGTTAAGGTTGATAAT+GGG | 0.494733 | 4.1:+34841137 | MS.gene056338:CDS |
CGGCGGCGAGGGAGGACATA+CGG | 0.496322 | 4.1:-34840862 | None:intergenic |
AATGGCAGATAAATGAGCTT+CGG | 0.499618 | 4.1:+34844248 | MS.gene056338:intron |
GGGACTTAACAGGCAAAAGT+TGG | 0.501194 | 4.1:-34842724 | None:intergenic |
TCAGCGACTGCATGGCGCAC+TGG | 0.503078 | 4.1:+34842834 | MS.gene056338:CDS |
CACTACAAGCTTTGAAGCAA+GGG | 0.503171 | 4.1:-34842744 | None:intergenic |
CTGAAAGATCATTACCTGGC+TGG | 0.509814 | 4.1:+34842797 | MS.gene056338:CDS |
CGCAGAAGCAGTTCGTGAGA+TGG | 0.510927 | 4.1:+34840901 | MS.gene056338:CDS |
CGCACATAGTGCCACCACTT+TGG | 0.511097 | 4.1:-34845675 | None:intergenic |
CCACCAGTAAAACAATAGTC+AGG | 0.511588 | 4.1:-34844286 | None:intergenic |
GAGATGGAGTGGAGGAGTGT+GGG | 0.514149 | 4.1:-34840815 | None:intergenic |
AGTTCCTCAGACAAAGATGC+TGG | 0.515281 | 4.1:-34844945 | None:intergenic |
AAGCAGTTCGTGAGATGGCG+TGG | 0.524892 | 4.1:+34840906 | MS.gene056338:CDS |
CATGCTTTGCAATTCCAGCC+AGG | 0.532765 | 4.1:+34844986 | MS.gene056338:CDS |
CAACACCGAGTGCCAAGGAC+CGG | 0.542861 | 4.1:-34840942 | None:intergenic |
TTTGGATTCTGCTGTTGTGA+AGG | 0.548244 | 4.1:+34841099 | MS.gene056338:CDS |
GGATGCTGAGCAAGATATGT+AGG | 0.548812 | 4.1:-34844112 | None:intergenic |
ACATAGTGCCACCACTTTGG+CGG | 0.549361 | 4.1:-34845672 | None:intergenic |
GAATGTTATGATGTGGATCA+TGG | 0.556277 | 4.1:-34844369 | None:intergenic |
AGATGAATTGAAGTTTCCTA+AGG | 0.560556 | 4.1:+34845593 | MS.gene056338:CDS |
TGCGGCGCGAATGTCGCCGG+CGG | 0.563097 | 4.1:-34840882 | None:intergenic |
TTATCCAGCATCTTTGTCTG+AGG | 0.563839 | 4.1:+34844941 | MS.gene056338:CDS |
TGATGTGGATCATGGTGTAA+TGG | 0.564342 | 4.1:-34844361 | None:intergenic |
GTGGCGTGACGCGTACTCGA+TGG | 0.564597 | 4.1:+34840970 | MS.gene056338:CDS |
ATATGGGGATTATTATGGGT+GGG | 0.564715 | 4.1:+34841059 | MS.gene056338:CDS |
CAGAAAACTAAATACCTGGC+TGG | 0.564939 | 4.1:-34845000 | None:intergenic |
GGTTTCGGAGAAAGCGAGGA+TGG | 0.569922 | 4.1:+34841120 | MS.gene056338:CDS |
CATCTCACGAACTGCTTCTG+CGG | 0.572178 | 4.1:-34840900 | None:intergenic |
AGAGTTTAAAGAGGCGCTTA+GGG | 0.572608 | 4.1:+34841030 | MS.gene056338:CDS |
CTTCCTGAAAGATCATTACC+TGG | 0.575421 | 4.1:+34842793 | MS.gene056338:CDS |
GCAAGATATGTAGGACCACC+AGG | 0.576296 | 4.1:-34844103 | None:intergenic |
TCTTGAATTTGATGTGTCAA+AGG | 0.578033 | 4.1:+34841201 | MS.gene056338:CDS |
CTCCACTCCATCTCATCCCA+CGG | 0.580867 | 4.1:+34840824 | MS.gene056338:CDS |
ACCGGCAACACCGAGTGCCA+AGG | 0.583074 | 4.1:-34840947 | None:intergenic |
GAGAGAGTCGCTGATGGATG+AGG | 0.583669 | 4.1:-34840765 | None:intergenic |
GTAGCCTCCGTGGGATGAGA+TGG | 0.584469 | 4.1:-34840831 | None:intergenic |
AGTTATCATCAGCGACTGCA+TGG | 0.585260 | 4.1:+34842826 | MS.gene056338:CDS |
TCACTACAAGCTTTGAAGCA+AGG | 0.585461 | 4.1:-34842745 | None:intergenic |
CAGGAAGTTCTCCAGTGACA+AGG | 0.586848 | 4.1:-34842777 | None:intergenic |
GATATGGGGATTATTATGGG+TGG | 0.587263 | 4.1:+34841058 | MS.gene056338:CDS |
ACATCATAACATTCTAGCAC+AGG | 0.591569 | 4.1:+34844378 | MS.gene056338:CDS |
GGAGATTCTGCATCGAGTGT+TGG | 0.598648 | 4.1:-34840794 | None:intergenic |
GGCACTCGGTGTTGCCGGTG+TGG | 0.599102 | 4.1:+34840951 | MS.gene056338:CDS |
AATGGCGTTACAGTTCCAGC+TGG | 0.601305 | 4.1:-34844343 | None:intergenic |
TGAAGGTTTCGGAGAAAGCG+AGG | 0.607500 | 4.1:+34841116 | MS.gene056338:CDS |
GACGTAGGCGTAGCCTCCGT+GGG | 0.608040 | 4.1:-34840840 | None:intergenic |
TGAAAATGGAGAGTTTAAAG+AGG | 0.609357 | 4.1:+34841021 | MS.gene056338:CDS |
TGTTTGGAGAGAGTCGCTGA+TGG | 0.609707 | 4.1:-34840771 | None:intergenic |
GCGTGGGAGCAGCTGCACTC+CGG | 0.612868 | 4.1:+34840923 | MS.gene056338:CDS |
TATATATCCCGCCAAAGTGG+TGG | 0.622734 | 4.1:+34845664 | MS.gene056338:CDS |
AGAGTCGCTGATGGATGAGG+TGG | 0.626527 | 4.1:-34840762 | None:intergenic |
AGCAGTTCGTGAGATGGCGT+GGG | 0.629178 | 4.1:+34840907 | MS.gene056338:CDS |
GGACGTAGGCGTAGCCTCCG+TGG | 0.630457 | 4.1:-34840841 | None:intergenic |
CGTGGGATGAGATGGAGTGG+AGG | 0.638713 | 4.1:-34840823 | None:intergenic |
CTCCGTGGGATGAGATGGAG+TGG | 0.638980 | 4.1:-34840826 | None:intergenic |
TGGTTAAGGTTGATAATGGG+AGG | 0.642332 | 4.1:+34841140 | MS.gene056338:CDS |
AAAGCATGATTTCTGAGTAG+GGG | 0.643449 | 4.1:-34844971 | None:intergenic |
AAAGTAATACGACATTAAGA+CGG | 0.647553 | 4.1:-34845756 | None:intergenic |
TGTTATATATCCCGCCAAAG+TGG | 0.659158 | 4.1:+34845661 | MS.gene056338:CDS |
TGTGCTAGAATGTTATGATG+TGG | 0.685727 | 4.1:-34844376 | None:intergenic |
CACTCCATCTCATCCCACGG+AGG | 0.717936 | 4.1:+34840827 | MS.gene056338:CDS |
GAGTACGCGTCACGCCACAC+CGG | 0.723133 | 4.1:-34840965 | None:intergenic |
GAGGGAGGACATACGGACGT+AGG | 0.726924 | 4.1:-34840855 | None:intergenic |
TTACCTCAACCGGAACAGTG+CGG | 0.784273 | 4.1:-34842910 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTAAGTTCTTTTTTTT+TGG | + | chr4.1:34843205-34843224 | MS.gene056338:intron | 10.0% |
!! | AAATTTAGCTATTTAAAAAG+AGG | - | chr4.1:34843460-34843479 | None:intergenic | 15.0% |
!! | AATTTAGCTATTTAAAAAGA+GGG | - | chr4.1:34843459-34843478 | None:intergenic | 15.0% |
!! | ATTCTACCAAAAAAAAAAAA+AGG | - | chr4.1:34841667-34841686 | None:intergenic | 15.0% |
!! | GTATATTAATTGAAAAAAAG+AGG | - | chr4.1:34841602-34841621 | None:intergenic | 15.0% |
!! | TATAACACAATTGTAATATA+GGG | - | chr4.1:34844662-34844681 | None:intergenic | 15.0% |
!! | TCATTATAACATTTAAACAA+TGG | + | chr4.1:34842493-34842512 | MS.gene056338:intron | 15.0% |
!! | TTCTTACTTATATTAATACA+TGG | + | chr4.1:34841398-34841417 | MS.gene056338:intron | 15.0% |
!!! | AATAGCTAAATTTATTTCTA+CGG | + | chr4.1:34843467-34843486 | MS.gene056338:intron | 15.0% |
!!! | AGTGAATAAATAAATTTGTT+TGG | + | chr4.1:34843661-34843680 | MS.gene056338:intron | 15.0% |
!!! | TCATTTTATTGCTTTTAATT+AGG | + | chr4.1:34845467-34845486 | MS.gene056338:intron | 15.0% |
!!! | TGAATACCTTTTTTTTTTTT+TGG | + | chr4.1:34841658-34841677 | MS.gene056338:intron | 15.0% |
!! | AAGTTAATACTAATCACTAA+TGG | + | chr4.1:34841827-34841846 | MS.gene056338:intron | 20.0% |
!! | AATAGTATACTAGAAGAAAA+GGG | + | chr4.1:34843967-34843986 | MS.gene056338:intron | 20.0% |
!! | AATTAAGGAAATACTTCTAT+AGG | - | chr4.1:34845182-34845201 | None:intergenic | 20.0% |
!! | AGTAGTTATTAGTGAAATAA+AGG | + | chr4.1:34844574-34844593 | MS.gene056338:intron | 20.0% |
!! | AGTTTACCTATACAATATAT+GGG | + | chr4.1:34845350-34845369 | MS.gene056338:intron | 20.0% |
!! | ATAACATTTAAACAATGGAA+TGG | + | chr4.1:34842498-34842517 | MS.gene056338:intron | 20.0% |
!! | ATATAACATGATTTAACTCT+GGG | - | chr4.1:34844512-34844531 | None:intergenic | 20.0% |
!! | ATTTAGCTATTTAAAAAGAG+GGG | - | chr4.1:34843458-34843477 | None:intergenic | 20.0% |
!! | CAGAAAAAAAAAATTACAAG+AGG | - | chr4.1:34843921-34843940 | None:intergenic | 20.0% |
!! | CTATAACACAATTGTAATAT+AGG | - | chr4.1:34844663-34844682 | None:intergenic | 20.0% |
!! | GATATAAGATAGAAATGTTT+AGG | - | chr4.1:34845305-34845324 | None:intergenic | 20.0% |
!! | GATGAATTTATGATTAATTC+TGG | - | chr4.1:34843497-34843516 | None:intergenic | 20.0% |
!! | TAATAGTATACTAGAAGAAA+AGG | + | chr4.1:34843966-34843985 | MS.gene056338:intron | 20.0% |
!! | TACAAATTACAGTATAAAGA+CGG | - | chr4.1:34843861-34843880 | None:intergenic | 20.0% |
!! | TATATAACATGATTTAACTC+TGG | - | chr4.1:34844513-34844532 | None:intergenic | 20.0% |
!! | TATATAATTCAAGCTATGAA+TGG | - | chr4.1:34841635-34841654 | None:intergenic | 20.0% |
!! | TTAATACACTTTGATTACAT+TGG | + | chr4.1:34843388-34843407 | MS.gene056338:intron | 20.0% |
!! | TTATTAGATGAAATCTATGT+GGG | - | chr4.1:34841791-34841810 | None:intergenic | 20.0% |
!! | TTTATTAGATGAAATCTATG+TGG | - | chr4.1:34841792-34841811 | None:intergenic | 20.0% |
!!! | AAGAAATACTCTATTTCTAT+TGG | - | chr4.1:34841383-34841402 | None:intergenic | 20.0% |
!!! | AGAGATAAAGTTTTCAAAAT+CGG | + | chr4.1:34843000-34843019 | MS.gene056338:intron | 20.0% |
!!! | AGTTTTGTAATTGTTAGTTA+AGG | - | chr4.1:34843122-34843141 | None:intergenic | 20.0% |
!!! | ATAGCTAAATTTATTTCTAC+GGG | + | chr4.1:34843468-34843487 | MS.gene056338:intron | 20.0% |
!!! | GTAATTTTTTTTTTCTGTGA+TGG | + | chr4.1:34843924-34843943 | MS.gene056338:intron | 20.0% |
!!! | GTTTTTTAATAGAAATGTCA+AGG | + | chr4.1:34842243-34842262 | MS.gene056338:intron | 20.0% |
!!! | TATATTATTCCAGTTTTTCT+TGG | - | chr4.1:34842864-34842883 | None:intergenic | 20.0% |
!!! | TATTTTGAACGAATTGATTT+AGG | + | chr4.1:34841930-34841949 | MS.gene056338:intron | 20.0% |
!!! | TGTATAATATTTTTACAGCT+CGG | - | chr4.1:34841447-34841466 | None:intergenic | 20.0% |
!!! | TTATTGCTTTTTGATATTTC+TGG | + | chr4.1:34845510-34845529 | MS.gene056338:intron | 20.0% |
!!! | TTCAAAATACATTTTTGCTA+TGG | - | chr4.1:34841919-34841938 | None:intergenic | 20.0% |
! | AAAAAACATTTCTCCGTTAA+TGG | - | chr4.1:34842458-34842477 | None:intergenic | 25.0% |
! | AAAACTATTTATGTGCAGAT+TGG | + | chr4.1:34844020-34844039 | MS.gene056338:CDS | 25.0% |
! | AAATAAGAACCATAATAGCA+AGG | - | chr4.1:34844538-34844557 | None:intergenic | 25.0% |
! | AATAAGAACCATAATAGCAA+GGG | - | chr4.1:34844537-34844556 | None:intergenic | 25.0% |
! | ACAAATTACAGTATAAAGAC+GGG | - | chr4.1:34843860-34843879 | None:intergenic | 25.0% |
! | ACAACTTTGTTACTAGTATT+TGG | + | chr4.1:34843241-34843260 | MS.gene056338:intron | 25.0% |
! | ACAGATTTCTCTTAAGATAA+GGG | - | chr4.1:34844769-34844788 | None:intergenic | 25.0% |
! | ACATGAGTAAAATGATTATG+GGG | + | chr4.1:34842639-34842658 | MS.gene056338:intron | 25.0% |
! | AGACATGAGTAAAATGATTA+TGG | + | chr4.1:34842637-34842656 | MS.gene056338:intron | 25.0% |
! | ATAAATACAAACAACACTTG+AGG | - | chr4.1:34843889-34843908 | None:intergenic | 25.0% |
! | CAACTTTGTTACTAGTATTT+GGG | + | chr4.1:34843242-34843261 | MS.gene056338:intron | 25.0% |
! | CAATCAGAGAGATATTTAAA+GGG | - | chr4.1:34843579-34843598 | None:intergenic | 25.0% |
! | CAGTTTACCTATACAATATA+TGG | + | chr4.1:34845349-34845368 | MS.gene056338:intron | 25.0% |
! | CATAAAATTCAAGCTATGAA+TGG | - | chr4.1:34841713-34841732 | None:intergenic | 25.0% |
! | CATAATAAAACTCCATTGTT+TGG | + | chr4.1:34842343-34842362 | MS.gene056338:intron | 25.0% |
! | CATATATTGTATAGGTAAAC+TGG | - | chr4.1:34845351-34845370 | None:intergenic | 25.0% |
! | CCAATTAAATAATTTCCTAG+TGG | - | chr4.1:34843519-34843538 | None:intergenic | 25.0% |
! | CCACTAGGAAATTATTTAAT+TGG | + | chr4.1:34843516-34843535 | MS.gene056338:intron | 25.0% |
! | CCATAGAATGATATATTTGA+CGG | + | chr4.1:34844864-34844883 | MS.gene056338:intron | 25.0% |
! | CTATAAAGTAAACGTTAGAA+GGG | - | chr4.1:34842685-34842704 | None:intergenic | 25.0% |
! | GACATGAGTAAAATGATTAT+GGG | + | chr4.1:34842638-34842657 | MS.gene056338:intron | 25.0% |
! | GTTTACCTATACAATATATG+GGG | + | chr4.1:34845351-34845370 | MS.gene056338:intron | 25.0% |
! | TAACAGCTAATGAACATTTA+CGG | - | chr4.1:34843166-34843185 | None:intergenic | 25.0% |
! | TAAGAGACTTTATGGTTTAA+GGG | + | chr4.1:34841529-34841548 | MS.gene056338:intron | 25.0% |
! | TAATCATAAATTCATCCACT+AGG | + | chr4.1:34843501-34843520 | MS.gene056338:intron | 25.0% |
! | TTAAACAATGGAATGGTAAT+TGG | + | chr4.1:34842505-34842524 | MS.gene056338:intron | 25.0% |
! | TTGAATACCTGATCAAATAA+GGG | - | chr4.1:34844136-34844155 | None:intergenic | 25.0% |
! | TTTGAATACCTGATCAAATA+AGG | - | chr4.1:34844137-34844156 | None:intergenic | 25.0% |
!! | AAATCAATTTTGTGCATGTT+TGG | + | chr4.1:34842130-34842149 | MS.gene056338:intron | 25.0% |
!! | AAATCTGTGATACAACATTT+TGG | + | chr4.1:34844781-34844800 | MS.gene056338:intron | 25.0% |
!! | CTACATTTTCAACAAAATCA+AGG | - | chr4.1:34842169-34842188 | None:intergenic | 25.0% |
!! | GAGATAAAGTTTTCAAAATC+GGG | + | chr4.1:34843001-34843020 | MS.gene056338:intron | 25.0% |
!! | GTTGAGGTAAATGTTTATTT+TGG | + | chr4.1:34841888-34841907 | MS.gene056338:intron | 25.0% |
!! | TGATTTGTAACTAAAATGCA+TGG | + | chr4.1:34842943-34842962 | MS.gene056338:intron | 25.0% |
!! | TTTAGTTTCTTGATTTCACA+GGG | + | chr4.1:34843032-34843051 | MS.gene056338:intron | 25.0% |
!! | TTTTACCATTTTACAACAGA+CGG | - | chr4.1:34845403-34845422 | None:intergenic | 25.0% |
!!! | TTTCTACATAGAGCATTTTT+AGG | - | chr4.1:34843608-34843627 | None:intergenic | 25.0% |
AAATATCTCTCTGATTGCAT+AGG | + | chr4.1:34843582-34843601 | MS.gene056338:intron | 30.0% | |
AAATTAATCCACGACTTTGT+AGG | - | chr4.1:34841571-34841590 | None:intergenic | 30.0% | |
AAGGATTGATTGAAATACGA+GGG | + | chr4.1:34842366-34842385 | MS.gene056338:intron | 30.0% | |
AATTAATCCACGACTTTGTA+GGG | - | chr4.1:34841570-34841589 | None:intergenic | 30.0% | |
AGACTAAACAACATCTATAG+AGG | + | chr4.1:34842025-34842044 | MS.gene056338:intron | 30.0% | |
AGAGAAGATACGTTGAATTA+AGG | - | chr4.1:34845197-34845216 | None:intergenic | 30.0% | |
AGATGAATTGAAGTTTCCTA+AGG | + | chr4.1:34845593-34845612 | MS.gene056338:CDS | 30.0% | |
AGTTCAGAAAACTAAATACC+TGG | - | chr4.1:34845007-34845026 | None:intergenic | 30.0% | |
ATAAAACTCCATTGTTTGGA+AGG | + | chr4.1:34842347-34842366 | MS.gene056338:intron | 30.0% | |
ATAAGAACCATAATAGCAAG+GGG | - | chr4.1:34844536-34844555 | None:intergenic | 30.0% | |
ATATATCCAAAAACAGCCTT+AGG | + | chr4.1:34842579-34842598 | MS.gene056338:intron | 30.0% | |
ATGAACGCATATGAAATGAA+TGG | - | chr4.1:34845451-34845470 | None:intergenic | 30.0% | |
CAAATATGATACAGGATTGA+TGG | + | chr4.1:34842307-34842326 | MS.gene056338:intron | 30.0% | |
CACAGATTTCTCTTAAGATA+AGG | - | chr4.1:34844770-34844789 | None:intergenic | 30.0% | |
CATGTCATAATTACAACAGT+TGG | - | chr4.1:34844184-34844203 | None:intergenic | 30.0% | |
CCGTCAAATATATCATTCTA+TGG | - | chr4.1:34844867-34844886 | None:intergenic | 30.0% | |
CTAAATGTACACTTTATAGC+TGG | + | chr4.1:34844685-34844704 | MS.gene056338:intron | 30.0% | |
CTGTAACTTAACTCAATTGT+AGG | + | chr4.1:34843140-34843159 | MS.gene056338:intron | 30.0% | |
GCAATCAGAGAGATATTTAA+AGG | - | chr4.1:34843580-34843599 | None:intergenic | 30.0% | |
GCTATAAAGTAAACGTTAGA+AGG | - | chr4.1:34842686-34842705 | None:intergenic | 30.0% | |
GTAAGAGACTTTATGGTTTA+AGG | + | chr4.1:34841528-34841547 | MS.gene056338:intron | 30.0% | |
TAATTATGACATGCAAGTTC+AGG | + | chr4.1:34844191-34844210 | MS.gene056338:intron | 30.0% | |
TAGTAGAGTAAGAGACTTTA+TGG | + | chr4.1:34841521-34841540 | MS.gene056338:intron | 30.0% | |
TAGTATTTGGGAAAATTCAC+CGG | + | chr4.1:34843254-34843273 | MS.gene056338:intron | 30.0% | |
TATATCCAAAAACAGCCTTA+GGG | + | chr4.1:34842580-34842599 | MS.gene056338:intron | 30.0% | |
TATGCCTGTAAAGAAAAGTA+GGG | + | chr4.1:34843302-34843321 | MS.gene056338:intron | 30.0% | |
TCAATCCTGTATCATATTTG+AGG | - | chr4.1:34842307-34842326 | None:intergenic | 30.0% | |
TCTTGAATTTGATGTGTCAA+AGG | + | chr4.1:34841201-34841220 | MS.gene056338:CDS | 30.0% | |
TGAAAATGGAGAGTTTAAAG+AGG | + | chr4.1:34841021-34841040 | MS.gene056338:CDS | 30.0% | |
TTAATACATGGCAAGATGAT+TGG | + | chr4.1:34841410-34841429 | MS.gene056338:intron | 30.0% | |
TTAGTTTCTTGATTTCACAG+GGG | + | chr4.1:34843033-34843052 | MS.gene056338:intron | 30.0% | |
TTCTATAGGCTATAGTTCTT+CGG | - | chr4.1:34845168-34845187 | None:intergenic | 30.0% | |
TTGGATATGGGGATTATTAT+GGG | + | chr4.1:34841055-34841074 | MS.gene056338:CDS | 30.0% | |
TTGTTCTTCAAAGTTCAAAG+AGG | - | chr4.1:34842974-34842993 | None:intergenic | 30.0% | |
TTTGGATATGGGGATTATTA+TGG | + | chr4.1:34841054-34841073 | MS.gene056338:CDS | 30.0% | |
! | ATGGTAAAATTTTATGCGCA+CGG | + | chr4.1:34845414-34845433 | MS.gene056338:intron | 30.0% |
! | ATTTGTAGACTGCATTTTAG+AGG | + | chr4.1:34845629-34845648 | MS.gene056338:CDS | 30.0% |
! | CTTTATAGCTTTTACACTGT+AGG | + | chr4.1:34842697-34842716 | MS.gene056338:intron | 30.0% |
! | CTTTTCTTCTCTTCCATTAA+CGG | + | chr4.1:34842442-34842461 | MS.gene056338:intron | 30.0% |
! | GTTTAGTTTCTTGATTTCAC+AGG | + | chr4.1:34843031-34843050 | MS.gene056338:intron | 30.0% |
! | TACAAAGTCGTGGATTAATT+TGG | + | chr4.1:34841570-34841589 | MS.gene056338:intron | 30.0% |
!! | ACTCTATTTCTATTGGACAT+CGG | - | chr4.1:34841376-34841395 | None:intergenic | 30.0% |
!! | ATTCCTGACTATTGTTTTAC+TGG | + | chr4.1:34844283-34844302 | MS.gene056338:CDS | 30.0% |
!! | GGTCATTTTCTTTTGTTTGA+AGG | + | chr4.1:34845554-34845573 | MS.gene056338:intron | 30.0% |
!! | TTATATACCCCTTGCTATTA+TGG | + | chr4.1:34844526-34844545 | MS.gene056338:intron | 30.0% |
!!! | GGCTGTTTTTGGATATATAA+CGG | - | chr4.1:34842577-34842596 | None:intergenic | 30.0% |
AAAAATGCTGCGTACATTAC+CGG | + | chr4.1:34844837-34844856 | MS.gene056338:intron | 35.0% | |
AAAACAATTACGCGCATGTT+TGG | - | chr4.1:34842228-34842247 | None:intergenic | 35.0% | |
AAAGCATGATTTCTGAGTAG+GGG | - | chr4.1:34844974-34844993 | None:intergenic | 35.0% | |
AAAGGATCTGAGTATCAATG+GGG | - | chr4.1:34843085-34843104 | None:intergenic | 35.0% | |
AAGGTGAGAGTTTAATCCAA+AGG | - | chr4.1:34843103-34843122 | None:intergenic | 35.0% | |
AATGACAGGGTAAAAGTTCT+AGG | - | chr4.1:34843632-34843651 | None:intergenic | 35.0% | |
AATGGAAGAGAAGAAAAGCA+AGG | - | chr4.1:34842440-34842459 | None:intergenic | 35.0% | |
AATGGCAGATAAATGAGCTT+CGG | + | chr4.1:34844248-34844267 | MS.gene056338:intron | 35.0% | |
AATTACAGTATAAAGACGGG+AGG | - | chr4.1:34843857-34843876 | None:intergenic | 35.0% | |
AATTTGATGTGTCAAAGGTG+AGG | + | chr4.1:34841206-34841225 | MS.gene056338:intron | 35.0% | |
ACAAGAGTAATTACCTCAAC+CGG | - | chr4.1:34842923-34842942 | None:intergenic | 35.0% | |
ACACTGTCAATGCATAGTTA+TGG | + | chr4.1:34841464-34841483 | MS.gene056338:intron | 35.0% | |
ACAGGATTGATGGAATGAAA+TGG | + | chr4.1:34842317-34842336 | MS.gene056338:intron | 35.0% | |
ACATCATAACATTCTAGCAC+AGG | + | chr4.1:34844378-34844397 | MS.gene056338:CDS | 35.0% | |
ACTCTACTAAACTGTCAAGT+TGG | - | chr4.1:34841510-34841529 | None:intergenic | 35.0% | |
AGTATTTGGGAAAATTCACC+GGG | + | chr4.1:34843255-34843274 | MS.gene056338:intron | 35.0% | |
AGTGATATTCTTCCAAGCAA+AGG | - | chr4.1:34845123-34845142 | None:intergenic | 35.0% | |
ATATGGGGATTATTATGGGT+GGG | + | chr4.1:34841059-34841078 | MS.gene056338:CDS | 35.0% | |
ATTACAGTATAAAGACGGGA+GGG | - | chr4.1:34843856-34843875 | None:intergenic | 35.0% | |
ATTTGTTTGGTTGCAACAGT+TGG | + | chr4.1:34843674-34843693 | MS.gene056338:intron | 35.0% | |
CAAAGCATGATTTCTGAGTA+GGG | - | chr4.1:34844975-34844994 | None:intergenic | 35.0% | |
CAAAGGATCTGAGTATCAAT+GGG | - | chr4.1:34843086-34843105 | None:intergenic | 35.0% | |
CAATCAATCCTTCCAAACAA+TGG | - | chr4.1:34842358-34842377 | None:intergenic | 35.0% | |
CAATGCATAGTTATGGTAAG+TGG | + | chr4.1:34841471-34841490 | MS.gene056338:intron | 35.0% | |
CCAAAAGCTAACTGATAAAC+TGG | - | chr4.1:34845712-34845731 | None:intergenic | 35.0% | |
CCATACCCCATATATTGTAT+AGG | - | chr4.1:34845359-34845378 | None:intergenic | 35.0% | |
CCTATACAATATATGGGGTA+TGG | + | chr4.1:34845356-34845375 | MS.gene056338:intron | 35.0% | |
CTTGATCGGATAAGATCTAA+AGG | + | chr4.1:34844073-34844092 | MS.gene056338:CDS | 35.0% | |
CTTTAGATCTTATCCGATCA+AGG | - | chr4.1:34844075-34844094 | None:intergenic | 35.0% | |
GAAGGATTGATTGAAATACG+AGG | + | chr4.1:34842365-34842384 | MS.gene056338:intron | 35.0% | |
GAATGTTATGATGTGGATCA+TGG | - | chr4.1:34844372-34844391 | None:intergenic | 35.0% | |
GCAGTTTGAGCAAAAAGTAA+CGG | + | chr4.1:34843277-34843296 | MS.gene056338:intron | 35.0% | |
GTATGCCTGTAAAGAAAAGT+AGG | + | chr4.1:34843301-34843320 | MS.gene056338:intron | 35.0% | |
GTCATCCTCAAATATGATAC+AGG | + | chr4.1:34842299-34842318 | MS.gene056338:intron | 35.0% | |
GTTCTTCGGTCATTCAAAAT+AGG | - | chr4.1:34845097-34845116 | None:intergenic | 35.0% | |
TATATCATTCTATGGTGCAC+CGG | - | chr4.1:34844859-34844878 | None:intergenic | 35.0% | |
TCAGGATTTGTCACAGAATA+GGG | - | chr4.1:34843721-34843740 | None:intergenic | 35.0% | |
TGAGTAAAATGATTATGGGG+TGG | + | chr4.1:34842642-34842661 | MS.gene056338:intron | 35.0% | |
TGCATCTCACAACTTTATGT+GGG | + | chr4.1:34841764-34841783 | MS.gene056338:intron | 35.0% | |
TGTAAAGAAAAGTAGGGTGA+GGG | + | chr4.1:34843308-34843327 | MS.gene056338:intron | 35.0% | |
TGTGCTAGAATGTTATGATG+TGG | - | chr4.1:34844379-34844398 | None:intergenic | 35.0% | |
TGTTGAACTGAAACTGGAAA+TGG | + | chr4.1:34843765-34843784 | MS.gene056338:intron | 35.0% | |
TTCTTCAAAGTTCAAAGAGG+AGG | - | chr4.1:34842971-34842990 | None:intergenic | 35.0% | |
TTGATTGAAATACGAGGGAA+AGG | + | chr4.1:34842371-34842390 | MS.gene056338:intron | 35.0% | |
TTGTTGGGAAAAAATACGTC+AGG | + | chr4.1:34844916-34844935 | MS.gene056338:CDS | 35.0% | |
! | ATTTTTACAGCTCGGACTAA+TGG | - | chr4.1:34841439-34841458 | None:intergenic | 35.0% |
! | CGGTTTCTGACATTTTTGAA+TGG | + | chr4.1:34844230-34844249 | MS.gene056338:intron | 35.0% |
! | GTAAAACTAGTTTACACCCA+CGG | - | chr4.1:34841352-34841371 | None:intergenic | 35.0% |
! | TTATTCCAGTTTTTCTTGGC+TGG | - | chr4.1:34842860-34842879 | None:intergenic | 35.0% |
! | TTTCTTTCTCTACTCTGAGA+TGG | - | chr4.1:34841321-34841340 | None:intergenic | 35.0% |
! | TTTGTGCATGTTTGGAATCA+CGG | + | chr4.1:34842138-34842157 | MS.gene056338:intron | 35.0% |
!! | AATGGGAGGTGTAAAGATTT+TGG | + | chr4.1:34841154-34841173 | MS.gene056338:CDS | 35.0% |
!! | ACTATTGTTTTACTGGTGGA+GGG | + | chr4.1:34844290-34844309 | MS.gene056338:CDS | 35.0% |
!! | AGGATGGTTAAGGTTGATAA+TGG | + | chr4.1:34841136-34841155 | MS.gene056338:CDS | 35.0% |
!! | GGATGGTTAAGGTTGATAAT+GGG | + | chr4.1:34841137-34841156 | MS.gene056338:CDS | 35.0% |
!! | TGTGTAAAGTGCTGTGAAAT+AGG | + | chr4.1:34841254-34841273 | MS.gene056338:intron | 35.0% |
!!! | ATGTTTTGACCACAGAGTTT+GGG | - | chr4.1:34842269-34842288 | None:intergenic | 35.0% |
!!! | CCAGTTTATCAGTTAGCTTT+TGG | + | chr4.1:34845709-34845728 | MS.gene056338:CDS | 35.0% |
!!! | GTTTATCAGTTAGCTTTTGG+TGG | + | chr4.1:34845712-34845731 | MS.gene056338:CDS | 35.0% |
!!! | TATGTTTTGACCACAGAGTT+TGG | - | chr4.1:34842270-34842289 | None:intergenic | 35.0% |
AACATGATTTAACTCTGGGC+AGG | - | chr4.1:34844508-34844527 | None:intergenic | 40.0% | |
AATTCCAAGTCTTGCACCTT+AGG | - | chr4.1:34845612-34845631 | None:intergenic | 40.0% | |
ACATGATTTAACTCTGGGCA+GGG | - | chr4.1:34844507-34844526 | None:intergenic | 40.0% | |
AGAAAGAAAGATGTACACCG+TGG | + | chr4.1:34841332-34841351 | MS.gene056338:intron | 40.0% | |
AGATCTCTCAATGCTTGGTT+TGG | + | chr4.1:34844319-34844338 | MS.gene056338:CDS | 40.0% | |
AGCGATATTCTTCCAAGCAA+AGG | - | chr4.1:34845066-34845085 | None:intergenic | 40.0% | |
AGCTAAGATCTCTCAATGCT+TGG | + | chr4.1:34844314-34844333 | MS.gene056338:CDS | 40.0% | |
AGGATTTGTCACAGAATAGG+GGG | - | chr4.1:34843719-34843738 | None:intergenic | 40.0% | |
ATGGCACTACAAGTCTACAA+CGG | + | chr4.1:34841846-34841865 | MS.gene056338:intron | 40.0% | |
CACTTGACAGATGAATGACA+GGG | - | chr4.1:34843645-34843664 | None:intergenic | 40.0% | |
CAGAAAACTAAATACCTGGC+TGG | - | chr4.1:34845003-34845022 | None:intergenic | 40.0% | |
CAGGATTTGTCACAGAATAG+GGG | - | chr4.1:34843720-34843739 | None:intergenic | 40.0% | |
CCAAAGGATCTGAGTATCAA+TGG | - | chr4.1:34843087-34843106 | None:intergenic | 40.0% | |
CCAAGTTGTTGAACTGAAAC+TGG | + | chr4.1:34843759-34843778 | MS.gene056338:intron | 40.0% | |
CCACCAGTAAAACAATAGTC+AGG | - | chr4.1:34844289-34844308 | None:intergenic | 40.0% | |
CCAGTTTCAGTTCAACAACT+TGG | - | chr4.1:34843762-34843781 | None:intergenic | 40.0% | |
CCATTGATACTCAGATCCTT+TGG | + | chr4.1:34843084-34843103 | MS.gene056338:intron | 40.0% | |
CGGTGAGTTTCAGAAAATCA+CGG | - | chr4.1:34842200-34842219 | None:intergenic | 40.0% | |
CTGAACGAAAGGGGATTTAT+TGG | - | chr4.1:34842545-34842564 | None:intergenic | 40.0% | |
CTGACATCTGAATGAAGTTG+AGG | + | chr4.1:34841872-34841891 | MS.gene056338:intron | 40.0% | |
CTGTAAAGAAAAGTAGGGTG+AGG | + | chr4.1:34843307-34843326 | MS.gene056338:intron | 40.0% | |
CTTCCTGAAAGATCATTACC+TGG | + | chr4.1:34842793-34842812 | MS.gene056338:CDS | 40.0% | |
GAAAGAAAGATGTACACCGT+GGG | + | chr4.1:34841333-34841352 | MS.gene056338:intron | 40.0% | |
GATATGGGGATTATTATGGG+TGG | + | chr4.1:34841058-34841077 | MS.gene056338:CDS | 40.0% | |
GATTACTTGCAAAGAGTTGC+TGG | + | chr4.1:34842884-34842903 | MS.gene056338:CDS | 40.0% | |
GCAAAGCATGATTTCTGAGT+AGG | - | chr4.1:34844976-34844995 | None:intergenic | 40.0% | |
GTCAGGATTTGTCACAGAAT+AGG | - | chr4.1:34843722-34843741 | None:intergenic | 40.0% | |
GTGCATCTCACAACTTTATG+TGG | + | chr4.1:34841763-34841782 | MS.gene056338:intron | 40.0% | |
GTTTCAGTTCAACAACTTGG+TGG | - | chr4.1:34843759-34843778 | None:intergenic | 40.0% | |
TCACTTGACAGATGAATGAC+AGG | - | chr4.1:34843646-34843665 | None:intergenic | 40.0% | |
TGATGTGGATCATGGTGTAA+TGG | - | chr4.1:34844364-34844383 | None:intergenic | 40.0% | |
TGGCTAAAACAGAATCTGTC+AGG | - | chr4.1:34843739-34843758 | None:intergenic | 40.0% | |
TGTTATATATCCCGCCAAAG+TGG | + | chr4.1:34845661-34845680 | MS.gene056338:CDS | 40.0% | |
TTACACACCTATACATGCAG+AGG | - | chr4.1:34845269-34845288 | None:intergenic | 40.0% | |
TTACAGTATAAAGACGGGAG+GGG | - | chr4.1:34843855-34843874 | None:intergenic | 40.0% | |
TTATCCAGCATCTTTGTCTG+AGG | + | chr4.1:34844941-34844960 | MS.gene056338:CDS | 40.0% | |
TTCTGCTGTTGTGAAGGTTT+CGG | + | chr4.1:34841105-34841124 | MS.gene056338:CDS | 40.0% | |
TTTCACACTTCCAGGTTGTT+GGG | + | chr4.1:34844901-34844920 | MS.gene056338:intron | 40.0% | |
TTTCTCTCCTCTGCATGTAT+AGG | + | chr4.1:34845259-34845278 | MS.gene056338:intron | 40.0% | |
TTTGGATTCTGCTGTTGTGA+AGG | + | chr4.1:34841099-34841118 | MS.gene056338:CDS | 40.0% | |
! | AAATCTGTCTTCGTGTTGAC+TGG | + | chr4.1:34845533-34845552 | MS.gene056338:intron | 40.0% |
! | AGATCTAAAGGCTTTTCTCC+TGG | + | chr4.1:34844085-34844104 | MS.gene056338:CDS | 40.0% |
! | ATAGGGAAGAAGCATGAATC+TGG | - | chr4.1:34844645-34844664 | None:intergenic | 40.0% |
! | CAGGACTTTTACTGCTCTTT+CGG | + | chr4.1:34844210-34844229 | MS.gene056338:intron | 40.0% |
! | CGTTTTCTGAGTTCCTTGAT+CGG | + | chr4.1:34844059-34844078 | MS.gene056338:CDS | 40.0% |
! | GAGTTTGCTTAGGAAGGATT+TGG | + | chr4.1:34841081-34841100 | MS.gene056338:CDS | 40.0% |
! | TCAGCATCCCTTATTTGATC+AGG | + | chr4.1:34844126-34844145 | MS.gene056338:CDS | 40.0% |
! | TTTGAAGCAAGGGACTTAAC+AGG | - | chr4.1:34842737-34842756 | None:intergenic | 40.0% |
!! | AGAGTTTAAAGAGGCGCTTA+GGG | + | chr4.1:34841030-34841049 | MS.gene056338:CDS | 40.0% |
!! | ATGTCTTGTTTCACACTTCC+AGG | + | chr4.1:34844893-34844912 | MS.gene056338:intron | 40.0% |
!! | CACTACAAGCTTTGAAGCAA+GGG | - | chr4.1:34842747-34842766 | None:intergenic | 40.0% |
!! | CCTGACTATTGTTTTACTGG+TGG | + | chr4.1:34844286-34844305 | MS.gene056338:CDS | 40.0% |
!! | CTATTGTTTTACTGGTGGAG+GGG | + | chr4.1:34844291-34844310 | MS.gene056338:CDS | 40.0% |
!! | CTCACCCTACTTTTCTTTAC+AGG | - | chr4.1:34843309-34843328 | None:intergenic | 40.0% |
!! | GACTATTGTTTTACTGGTGG+AGG | + | chr4.1:34844289-34844308 | MS.gene056338:CDS | 40.0% |
!! | GCGAAGTGTTGCTATGAAAA+TGG | + | chr4.1:34841007-34841026 | MS.gene056338:CDS | 40.0% |
!! | GTAGACTGCATTTTAGAGGA+AGG | + | chr4.1:34845633-34845652 | MS.gene056338:CDS | 40.0% |
!! | TACTTTTTGCTCAAACTGCC+CGG | - | chr4.1:34843276-34843295 | None:intergenic | 40.0% |
!! | TCACTACAAGCTTTGAAGCA+AGG | - | chr4.1:34842748-34842767 | None:intergenic | 40.0% |
!! | TGGTTAAGGTTGATAATGGG+AGG | + | chr4.1:34841140-34841159 | MS.gene056338:CDS | 40.0% |
!!! | CGTATTTTTTCCCAACAACC+TGG | - | chr4.1:34844914-34844933 | None:intergenic | 40.0% |
AAGTTGGACTCATGGGAGTA+TGG | - | chr4.1:34844602-34844621 | None:intergenic | 45.0% | |
ACACTTTATAGCTGGCAACC+TGG | + | chr4.1:34844693-34844712 | MS.gene056338:intron | 45.0% | |
ACAGGGGAAAACAGATAGCT+GGG | + | chr4.1:34843049-34843068 | MS.gene056338:intron | 45.0% | |
AGAGTGAAGCTGAACGAAAG+GGG | - | chr4.1:34842554-34842573 | None:intergenic | 45.0% | |
AGTTATCATCAGCGACTGCA+TGG | + | chr4.1:34842826-34842845 | MS.gene056338:CDS | 45.0% | |
AGTTCCTCAGACAAAGATGC+TGG | - | chr4.1:34844948-34844967 | None:intergenic | 45.0% | |
ATGCAGTCGCTGATGATAAC+TGG | - | chr4.1:34842827-34842846 | None:intergenic | 45.0% | |
ATTTGTCACAGAATAGGGGG+AGG | - | chr4.1:34843716-34843735 | None:intergenic | 45.0% | |
CAAGCAAAGGCTTAAGCAGA+CGG | - | chr4.1:34845053-34845072 | None:intergenic | 45.0% | |
CAGCCAGGTAATGATCTTTC+AGG | - | chr4.1:34842799-34842818 | None:intergenic | 45.0% | |
CGAAAGGGGATTTATTGGAG+TGG | - | chr4.1:34842540-34842559 | None:intergenic | 45.0% | |
CGACTCCGTCTGTTGTAAAA+TGG | + | chr4.1:34845395-34845414 | MS.gene056338:intron | 45.0% | |
CTGAAAGATCATTACCTGGC+TGG | + | chr4.1:34842797-34842816 | MS.gene056338:CDS | 45.0% | |
GAAATACGAGGGAAAGGAGT+GGG | + | chr4.1:34842377-34842396 | MS.gene056338:intron | 45.0% | |
GAGAGTGAAGCTGAACGAAA+GGG | - | chr4.1:34842555-34842574 | None:intergenic | 45.0% | |
GGATGCTGAGCAAGATATGT+AGG | - | chr4.1:34844115-34844134 | None:intergenic | 45.0% | |
GGGACTTAACAGGCAAAAGT+TGG | - | chr4.1:34842727-34842746 | None:intergenic | 45.0% | |
GTAACAGTACTTGCCGAAGT+TGG | - | chr4.1:34844618-34844637 | None:intergenic | 45.0% | |
GTTTCACACTTCCAGGTTGT+TGG | + | chr4.1:34844900-34844919 | MS.gene056338:intron | 45.0% | |
GTTTCCTAAGGTGCAAGACT+TGG | + | chr4.1:34845605-34845624 | MS.gene056338:CDS | 45.0% | |
TACATCAACTATGCCATGCC+AGG | - | chr4.1:34844714-34844733 | None:intergenic | 45.0% | |
TACGCGCATGTTTGGATTTG+CGG | - | chr4.1:34842220-34842239 | None:intergenic | 45.0% | |
TACTCCCATGAGTCCAACTT+CGG | + | chr4.1:34844602-34844621 | MS.gene056338:intron | 45.0% | |
TATATATCCCGCCAAAGTGG+TGG | + | chr4.1:34845664-34845683 | MS.gene056338:CDS | 45.0% | |
TGAAATACGAGGGAAAGGAG+TGG | + | chr4.1:34842376-34842395 | MS.gene056338:intron | 45.0% | |
TTCCCAACCTGCAAAGAATG+CGG | - | chr4.1:34844001-34844020 | None:intergenic | 45.0% | |
TTTGTCACAGAATAGGGGGA+GGG | - | chr4.1:34843715-34843734 | None:intergenic | 45.0% | |
! | AGTTGGACTCATGGGAGTAT+GGG | - | chr4.1:34844601-34844620 | None:intergenic | 45.0% |
! | CCAAGCAAAGGCTTGTTCTT+CGG | - | chr4.1:34845111-34845130 | None:intergenic | 45.0% |
! | GAAGAAGCATGAATCTGGCT+CGG | - | chr4.1:34844640-34844659 | None:intergenic | 45.0% |
! | TCTAAAGGCTTTTCTCCTGG+TGG | + | chr4.1:34844088-34844107 | MS.gene056338:CDS | 45.0% |
! | TTATGGGTGGGAGTTTGCTT+AGG | + | chr4.1:34841071-34841090 | MS.gene056338:CDS | 45.0% |
! | TTTTACAACAGACGGAGTCG+TGG | - | chr4.1:34845395-34845414 | None:intergenic | 45.0% |
!! | GAGAGTTTAAAGAGGCGCTT+AGG | + | chr4.1:34841029-34841048 | MS.gene056338:CDS | 45.0% |
!! | GGGAGGTGTAAAGATTTTGG+TGG | + | chr4.1:34841157-34841176 | MS.gene056338:CDS | 45.0% |
!!! | AGTTAGCTTTTGGTGGAGTG+AGG | + | chr4.1:34845719-34845738 | MS.gene056338:CDS | 45.0% |
!!! | GTTAGCTTTTGGTGGAGTGA+GGG | + | chr4.1:34845720-34845739 | MS.gene056338:CDS | 45.0% |
AAGTGTGCCGCATTCTTTGC+AGG | + | chr4.1:34843991-34844010 | MS.gene056338:intron | 50.0% | |
AATGGCGTTACAGTTCCAGC+TGG | - | chr4.1:34844346-34844365 | None:intergenic | 50.0% | |
ACATAGTGCCACCACTTTGG+CGG | - | chr4.1:34845675-34845694 | None:intergenic | 50.0% | |
ACTGGCCAGCCAAGAAAAAC+TGG | + | chr4.1:34842852-34842871 | MS.gene056338:CDS | 50.0% | |
ACTTGCCGAAGTTGGACTCA+TGG | - | chr4.1:34844610-34844629 | None:intergenic | 50.0% | |
ATGTCAAGGCCCAAACTCTG+TGG | + | chr4.1:34842257-34842276 | MS.gene056338:intron | 50.0% | |
CACAGGGGAAAACAGATAGC+TGG | + | chr4.1:34843048-34843067 | MS.gene056338:intron | 50.0% | |
CAGGAAGTTCTCCAGTGACA+AGG | - | chr4.1:34842780-34842799 | None:intergenic | 50.0% | |
CATCTCACGAACTGCTTCTG+CGG | - | chr4.1:34840903-34840922 | None:intergenic | 50.0% | |
CATGCTTTGCAATTCCAGCC+AGG | + | chr4.1:34844986-34845005 | MS.gene056338:CDS | 50.0% | |
CCGAAGAACAAGCCTTTGCT+TGG | + | chr4.1:34845108-34845127 | MS.gene056338:intron | 50.0% | |
CGTCTGCTTAAGCCTTTGCT+TGG | + | chr4.1:34845051-34845070 | MS.gene056338:intron | 50.0% | |
CTTGCCGAAGTTGGACTCAT+GGG | - | chr4.1:34844609-34844628 | None:intergenic | 50.0% | |
GAAGAGATCTGCCTTGTCAC+TGG | + | chr4.1:34842766-34842785 | MS.gene056338:CDS | 50.0% | |
GCAAGATATGTAGGACCACC+AGG | - | chr4.1:34844106-34844125 | None:intergenic | 50.0% | |
GGAGAAAGCGAGGATGGTTA+AGG | + | chr4.1:34841126-34841145 | MS.gene056338:CDS | 50.0% | |
GGAGAGTGAAGCTGAACGAA+AGG | - | chr4.1:34842556-34842575 | None:intergenic | 50.0% | |
GGAGATTCTGCATCGAGTGT+TGG | - | chr4.1:34840797-34840816 | None:intergenic | 50.0% | |
GGGAAAGGAGTGGGATATGA+TGG | + | chr4.1:34842386-34842405 | MS.gene056338:intron | 50.0% | |
TGAAGGTTTCGGAGAAAGCG+AGG | + | chr4.1:34841116-34841135 | MS.gene056338:CDS | 50.0% | |
TGCCGCATTCTTTGCAGGTT+GGG | + | chr4.1:34843996-34844015 | MS.gene056338:intron | 50.0% | |
TGTTTGGAGAGAGTCGCTGA+TGG | - | chr4.1:34840774-34840793 | None:intergenic | 50.0% | |
TTAAACACTCACCTCGCCCT+AGG | + | chr4.1:34844481-34844500 | MS.gene056338:intron | 50.0% | |
TTACCTCAACCGGAACAGTG+CGG | - | chr4.1:34842913-34842932 | None:intergenic | 50.0% | |
TTATAGCTGGCAACCTGGCA+TGG | + | chr4.1:34844698-34844717 | MS.gene056338:intron | 50.0% | |
TTGTCACAGAATAGGGGGAG+GGG | - | chr4.1:34843714-34843733 | None:intergenic | 50.0% | |
! | GTGCATGTTTGGAATCACGG+TGG | + | chr4.1:34842141-34842160 | MS.gene056338:intron | 50.0% |
!! | AAGCACAGAAGAGCACCCTA+AGG | - | chr4.1:34842598-34842617 | None:intergenic | 50.0% |
!! | AATGCTTGGTTTGGTCCAGC+TGG | + | chr4.1:34844328-34844347 | MS.gene056338:CDS | 50.0% |
!! | CGCTTAGGGCTTTGGATATG+GGG | + | chr4.1:34841044-34841063 | MS.gene056338:CDS | 50.0% |
!! | CTGCATCGAGTGTTGGTGTT+TGG | - | chr4.1:34840790-34840809 | None:intergenic | 50.0% |
!! | GAGAGTACCCTACAAAGTCG+TGG | + | chr4.1:34841560-34841579 | MS.gene056338:intron | 50.0% |
!! | GAGCACCCTAAGGCTGTTTT+TGG | - | chr4.1:34842588-34842607 | None:intergenic | 50.0% |
!! | GCGCTTAGGGCTTTGGATAT+GGG | + | chr4.1:34841043-34841062 | MS.gene056338:CDS | 50.0% |
!! | TAAAGAGGCGCTTAGGGCTT+TGG | + | chr4.1:34841036-34841055 | MS.gene056338:CDS | 50.0% |
AAGCAGTTCGTGAGATGGCG+TGG | + | chr4.1:34840906-34840925 | MS.gene056338:CDS | 55.0% | |
AGCAGTTCGTGAGATGGCGT+GGG | + | chr4.1:34840907-34840926 | MS.gene056338:CDS | 55.0% | |
CAGTATAAAGACGGGAGGGG+AGG | - | chr4.1:34843852-34843871 | None:intergenic | 55.0% | |
CATAGTGCCACCACTTTGGC+GGG | - | chr4.1:34845674-34845693 | None:intergenic | 55.0% | |
CGCACATAGTGCCACCACTT+TGG | - | chr4.1:34845678-34845697 | None:intergenic | 55.0% | |
CGCAGAAGCAGTTCGTGAGA+TGG | + | chr4.1:34840901-34840920 | MS.gene056338:CDS | 55.0% | |
CTCCACTCCATCTCATCCCA+CGG | + | chr4.1:34840824-34840843 | MS.gene056338:CDS | 55.0% | |
GGTTTCGGAGAAAGCGAGGA+TGG | + | chr4.1:34841120-34841139 | MS.gene056338:CDS | 55.0% | |
GTGCCGCATTCTTTGCAGGT+TGG | + | chr4.1:34843995-34844014 | MS.gene056338:intron | 55.0% | |
TGAGATGGAGTGGAGGAGTG+TGG | - | chr4.1:34840819-34840838 | None:intergenic | 55.0% | |
TGATAACTGGAGAGCCAGCC+AGG | - | chr4.1:34842814-34842833 | None:intergenic | 55.0% | |
TTAACTCTGGGCAGGGCCTA+GGG | - | chr4.1:34844500-34844519 | None:intergenic | 55.0% | |
TTTAACTCTGGGCAGGGCCT+AGG | - | chr4.1:34844501-34844520 | None:intergenic | 55.0% | |
! | AGAGTCGCTGATGGATGAGG+TGG | - | chr4.1:34840765-34840784 | None:intergenic | 55.0% |
! | GAGAGAGTCGCTGATGGATG+AGG | - | chr4.1:34840768-34840787 | None:intergenic | 55.0% |
! | GAGATGGAGTGGAGGAGTGT+GGG | - | chr4.1:34840818-34840837 | None:intergenic | 55.0% |
! | GGGTGGGAGTTTGCTTAGGA+AGG | + | chr4.1:34841075-34841094 | MS.gene056338:CDS | 55.0% |
!! | GGCGCTTAGGGCTTTGGATA+TGG | + | chr4.1:34841042-34841061 | MS.gene056338:CDS | 55.0% |
CAACACCGAGTGCCAAGGAC+CGG | - | chr4.1:34840945-34840964 | None:intergenic | 60.0% | |
CACTCCATCTCATCCCACGG+AGG | + | chr4.1:34840827-34840846 | MS.gene056338:CDS | 60.0% | |
CGTGGGATGAGATGGAGTGG+AGG | - | chr4.1:34840826-34840845 | None:intergenic | 60.0% | |
CTCCGTGGGATGAGATGGAG+TGG | - | chr4.1:34840829-34840848 | None:intergenic | 60.0% | |
GAGGGAGGACATACGGACGT+AGG | - | chr4.1:34840858-34840877 | None:intergenic | 60.0% | |
GTAGCCTCCGTGGGATGAGA+TGG | - | chr4.1:34840834-34840853 | None:intergenic | 60.0% | |
TGACCGCACTGTTCCGGTTG+AGG | + | chr4.1:34842907-34842926 | MS.gene056338:CDS | 60.0% | |
TGCTGGTGACCGCACTGTTC+CGG | + | chr4.1:34842901-34842920 | MS.gene056338:CDS | 60.0% | |
!! | TCCTTGGCACTCGGTGTTGC+CGG | + | chr4.1:34840946-34840965 | MS.gene056338:CDS | 60.0% |
ACCGGCAACACCGAGTGCCA+AGG | - | chr4.1:34840950-34840969 | None:intergenic | 65.0% | |
AGCAGCTGCACTCCGGTCCT+TGG | + | chr4.1:34840930-34840949 | MS.gene056338:CDS | 65.0% | |
GACGTAGGCGTAGCCTCCGT+GGG | - | chr4.1:34840843-34840862 | None:intergenic | 65.0% | |
GAGTACGCGTCACGCCACAC+CGG | - | chr4.1:34840968-34840987 | None:intergenic | 65.0% | |
GCACTCCGGTCCTTGGCACT+CGG | + | chr4.1:34840937-34840956 | MS.gene056338:CDS | 65.0% | |
GTGGCGTGACGCGTACTCGA+TGG | + | chr4.1:34840970-34840989 | MS.gene056338:CDS | 65.0% | |
TCAGCGACTGCATGGCGCAC+TGG | + | chr4.1:34842834-34842853 | MS.gene056338:CDS | 65.0% | |
TTCTGCGGCGCGAATGTCGC+CGG | - | chr4.1:34840888-34840907 | None:intergenic | 65.0% | |
CGGCGGCGAGGGAGGACATA+CGG | - | chr4.1:34840865-34840884 | None:intergenic | 70.0% | |
GCGTGGGAGCAGCTGCACTC+CGG | + | chr4.1:34840923-34840942 | MS.gene056338:CDS | 70.0% | |
GGACGTAGGCGTAGCCTCCG+TGG | - | chr4.1:34840844-34840863 | None:intergenic | 70.0% | |
!! | GGCACTCGGTGTTGCCGGTG+TGG | + | chr4.1:34840951-34840970 | MS.gene056338:CDS | 70.0% |
AATGTCGCCGGCGGCGGCGA+GGG | - | chr4.1:34840876-34840895 | None:intergenic | 75.0% | |
ATGTCCTCCCTCGCCGCCGC+CGG | + | chr4.1:34840866-34840885 | MS.gene056338:CDS | 75.0% | |
TCTGGGCAGGGCCTAGGGCG+AGG | - | chr4.1:34844495-34844514 | None:intergenic | 75.0% | |
TGCGGCGCGAATGTCGCCGG+CGG | - | chr4.1:34840885-34840904 | None:intergenic | 75.0% | |
! | GAATGTCGCCGGCGGCGGCG+AGG | - | chr4.1:34840877-34840896 | None:intergenic | 80.0% |
! | GGCGCGAATGTCGCCGGCGG+CGG | - | chr4.1:34840882-34840901 | None:intergenic | 80.0% |
! | GTCGCCGGCGGCGGCGAGGG+AGG | - | chr4.1:34840873-34840892 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 34840752 | 34845764 | 34840752 | ID=MS.gene056338 |
chr4.1 | mRNA | 34840752 | 34845764 | 34840752 | ID=MS.gene056338.t1;Parent=MS.gene056338 |
chr4.1 | exon | 34840752 | 34841222 | 34840752 | ID=MS.gene056338.t1.exon1;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34840752 | 34841222 | 34840752 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
chr4.1 | exon | 34842719 | 34842928 | 34842719 | ID=MS.gene056338.t1.exon2;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34842719 | 34842928 | 34842719 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
chr4.1 | exon | 34844013 | 34844147 | 34844013 | ID=MS.gene056338.t1.exon3;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34844013 | 34844147 | 34844013 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
chr4.1 | exon | 34844256 | 34844399 | 34844256 | ID=MS.gene056338.t1.exon4;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34844256 | 34844399 | 34844256 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
chr4.1 | exon | 34844915 | 34845007 | 34844915 | ID=MS.gene056338.t1.exon5;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34844915 | 34845007 | 34844915 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
chr4.1 | exon | 34845576 | 34845764 | 34845576 | ID=MS.gene056338.t1.exon6;Parent=MS.gene056338.t1 |
chr4.1 | CDS | 34845576 | 34845764 | 34845576 | ID=cds.MS.gene056338.t1;Parent=MS.gene056338.t1 |
Gene Sequence |
Protein sequence |