Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54734.t1 | XP_003618380.2 | 98.1 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 3.20E-214 | 754.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54734.t1 | Q86HG0 | 48.2 | 413 | 199 | 3 | 9 | 414 | 8 | 412 | 5.7e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54734.t1 | G7KJH0 | 98.1 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 2.3e-214 | 754.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene54734 | 0.810036 | 1.41E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene54734 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene54734 | 0.802575 | 5.26E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene54734 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene54734 | 0.806558 | 7.76E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene54734 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene54734 | 0.83934 | 1.68E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54734.t1 | MTR_6g008840 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 842 |
| MS.gene54734.t1 | MTR_3g078570 | 81.068 | 412 | 78 | 0 | 3 | 414 | 4 | 415 | 0.0 | 707 |
| MS.gene54734.t1 | MTR_3g078570 | 81.694 | 366 | 67 | 0 | 3 | 368 | 4 | 369 | 0.0 | 638 |
| MS.gene54734.t1 | MTR_4g071670 | 90.678 | 236 | 4 | 1 | 179 | 414 | 3 | 220 | 4.31e-151 | 427 |
| MS.gene54734.t1 | MTR_3g069070 | 32.678 | 407 | 225 | 8 | 9 | 414 | 3 | 361 | 2.36e-61 | 202 |
| MS.gene54734.t1 | MTR_5g080770 | 32.678 | 407 | 225 | 8 | 9 | 414 | 3 | 361 | 1.38e-60 | 201 |
| MS.gene54734.t1 | MTR_3g069070 | 31.395 | 344 | 190 | 6 | 72 | 414 | 4 | 302 | 1.89e-48 | 167 |
| MS.gene54734.t1 | MTR_4g133690 | 30.564 | 337 | 171 | 6 | 79 | 414 | 30 | 304 | 3.70e-41 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54734.t1 | AT1G74910 | 80.732 | 410 | 78 | 1 | 5 | 414 | 7 | 415 | 0.0 | 702 |
| MS.gene54734.t1 | AT1G74910 | 80.732 | 410 | 78 | 1 | 5 | 414 | 7 | 415 | 0.0 | 702 |
| MS.gene54734.t1 | AT2G04650 | 79.903 | 413 | 74 | 3 | 3 | 414 | 2 | 406 | 0.0 | 682 |
| MS.gene54734.t1 | AT2G04650 | 79.345 | 397 | 73 | 3 | 19 | 414 | 6 | 394 | 0.0 | 652 |
| MS.gene54734.t1 | AT1G74910 | 81.593 | 364 | 66 | 1 | 5 | 368 | 7 | 369 | 0.0 | 635 |
| MS.gene54734.t1 | AT2G39770 | 32.432 | 407 | 226 | 9 | 9 | 414 | 3 | 361 | 2.90e-58 | 194 |
| MS.gene54734.t1 | AT2G39770 | 32.432 | 407 | 226 | 9 | 9 | 414 | 3 | 361 | 2.90e-58 | 194 |
| MS.gene54734.t1 | AT2G39770 | 32.432 | 407 | 226 | 9 | 9 | 414 | 3 | 361 | 2.90e-58 | 194 |
| MS.gene54734.t1 | AT4G30570 | 31.383 | 376 | 211 | 7 | 30 | 404 | 2 | 331 | 1.62e-55 | 186 |
| MS.gene54734.t1 | AT3G55590 | 32.412 | 398 | 216 | 8 | 9 | 402 | 3 | 351 | 2.99e-54 | 184 |
Find 98 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATATATTTGAGCTAAAT+TGG | 0.125879 | 6.2:-4431091 | None:intergenic |
| ATCCTATTTCTGCTTGTAAA+AGG | 0.160125 | 6.2:+4429619 | MS.gene54734:CDS |
| TGTATACAATTTCTTCTTTC+CGG | 0.164435 | 6.2:-4434029 | None:intergenic |
| TTAGCTCAAATATATCTTAT+TGG | 0.180015 | 6.2:+4431096 | MS.gene54734:CDS |
| CATATGAAACAAATGATTTC+TGG | 0.190498 | 6.2:+4434050 | MS.gene54734:CDS |
| TGCAGCAATTCATGAGTTTC+TGG | 0.228203 | 6.2:-4432373 | None:intergenic |
| CTTGGACGATGTTGAAATTA+AGG | 0.232310 | 6.2:+4434520 | MS.gene54734:CDS |
| GCAGATGCTCATATAAAATA+TGG | 0.258528 | 6.2:+4431621 | MS.gene54734:intron |
| GTTGACCAGCCAAAGGAAAA+AGG | 0.283369 | 6.2:-4429584 | None:intergenic |
| AAAAGTTGTTGCTGTGATTA+TGG | 0.314737 | 6.2:+4429418 | MS.gene54734:CDS |
| TCCAGTCTTACAAAATCTTT+AGG | 0.340542 | 6.2:-4433983 | None:intergenic |
| AAGCTTGGCATAACCATTCT+AGG | 0.354158 | 6.2:+4434870 | MS.gene54734:CDS |
| AGTTGTATCTTGCTCAATTT+CGG | 0.355448 | 6.2:+4434204 | MS.gene54734:CDS |
| TATTATAGTAATCACCTTAC+AGG | 0.361669 | 6.2:-4431180 | None:intergenic |
| GAGACAAACCTCTTCCTTCT+CGG | 0.366643 | 6.2:-4432658 | None:intergenic |
| TGCAGCATACATCACAATTT+AGG | 0.369066 | 6.2:-4431496 | None:intergenic |
| TCCTTTGGCTGGTCAACCTA+TGG | 0.400968 | 6.2:+4429590 | MS.gene54734:CDS |
| GGTGCTGGCGTCAGGTTAAT+CGG | 0.402263 | 6.2:+4434488 | MS.gene54734:CDS |
| CGGAAGATGGTCACGTGTAC+AGG | 0.405589 | 6.2:+4434668 | MS.gene54734:CDS |
| GTAATCATAAATTCCATTGT+TGG | 0.411941 | 6.2:+4434630 | MS.gene54734:CDS |
| AGATATATTTGAGCTAAATT+GGG | 0.431749 | 6.2:-4431090 | None:intergenic |
| TTCGTGTTGGTGCTGGCGTC+AGG | 0.434853 | 6.2:+4434480 | MS.gene54734:CDS |
| CTCCACTGGGCAAAAGATGC+GGG | 0.442821 | 6.2:-4434235 | None:intergenic |
| TTGGCTGAGATGGAAACATT+TGG | 0.443769 | 6.2:-4434455 | None:intergenic |
| ATATGAAACAAATGATTTCT+GGG | 0.448367 | 6.2:+4434051 | MS.gene54734:CDS |
| TGGGAGCAAATTAAAACTCC+AGG | 0.451778 | 6.2:+4434070 | MS.gene54734:CDS |
| GCCAATGTTCGTGTTGGTGC+TGG | 0.452574 | 6.2:+4434473 | MS.gene54734:CDS |
| TCCTATTTCTGCTTGTAAAA+GGG | 0.455808 | 6.2:+4429620 | MS.gene54734:CDS |
| AATTAATTGTTTCAGGCTGA+TGG | 0.459675 | 6.2:+4434834 | MS.gene54734:intron |
| CATATAAAATATGGTGGGAT+GGG | 0.462322 | 6.2:+4431630 | MS.gene54734:CDS |
| TTTGGAGTATTGAAAGAAAG+TGG | 0.466662 | 6.2:-4429558 | None:intergenic |
| ATGAGCTGAAATTACCTGTA+AGG | 0.469123 | 6.2:+4431166 | MS.gene54734:CDS |
| CTTTGCAGATGGATGAACTT+TGG | 0.469385 | 6.2:-4434309 | None:intergenic |
| CAGCAACCAACTCACCGAAC+TGG | 0.486498 | 6.2:-4432348 | None:intergenic |
| GTTAATCGGTTGTATCGTCT+TGG | 0.487809 | 6.2:+4434502 | MS.gene54734:CDS |
| GCTGAATCTGCTAACCAGTT+CGG | 0.490534 | 6.2:+4432334 | MS.gene54734:CDS |
| AACACGAACATTGGCTGAGA+TGG | 0.490699 | 6.2:-4434465 | None:intergenic |
| TAATCAACCTTGTCGCAGAC+TGG | 0.490719 | 6.2:-4432911 | None:intergenic |
| GGGGACAATGTTAGTGATCA+AGG | 0.491236 | 6.2:+4431650 | MS.gene54734:CDS |
| TGCTAACCAGTTCGGTGAGT+TGG | 0.498008 | 6.2:+4432342 | MS.gene54734:CDS |
| CAGATACTCACAAATGTCTC+AGG | 0.506229 | 6.2:-4432409 | None:intergenic |
| AGAAGAGGGTGTACCTAGAA+TGG | 0.512354 | 6.2:-4434883 | None:intergenic |
| ATGAAACCATATACCTTTGG+TGG | 0.513362 | 6.2:-4429450 | None:intergenic |
| TTACCAAGCATGGATGATAG+TGG | 0.514400 | 6.2:-4431524 | None:intergenic |
| GATAAACCACATGGATCAGC+AGG | 0.515205 | 6.2:+4431312 | MS.gene54734:CDS |
| TTTCCACTATCATCCATGCT+TGG | 0.517916 | 6.2:+4431521 | MS.gene54734:CDS |
| CTACTTCCGAGATATTATCA+TGG | 0.518545 | 6.2:+4431344 | MS.gene54734:CDS |
| ATCTCAGCCAATGTTCGTGT+TGG | 0.523503 | 6.2:+4434467 | MS.gene54734:CDS |
| GAGCGAAATCTCGTTCCTCA+TGG | 0.528296 | 6.2:-4431122 | None:intergenic |
| GGAAGTCGTCCCTCGGAAGA+TGG | 0.530471 | 6.2:+4434655 | MS.gene54734:CDS |
| TCATAAATTCCATTGTTGGA+TGG | 0.534356 | 6.2:+4434634 | MS.gene54734:CDS |
| TCATATAAAATATGGTGGGA+TGG | 0.535504 | 6.2:+4431629 | MS.gene54734:CDS |
| AGCAACATACTTACCAAGCA+TGG | 0.535688 | 6.2:-4431534 | None:intergenic |
| ATATCAATGTAGATATTTGA+AGG | 0.537692 | 6.2:+4431287 | MS.gene54734:intron |
| AATTTCTTCTTTCCGGCTAG+AGG | 0.541082 | 6.2:-4434022 | None:intergenic |
| GCCAGCACCAACACGAACAT+TGG | 0.541668 | 6.2:-4434474 | None:intergenic |
| TAATATCTCGGAAGTAGTAA+AGG | 0.541674 | 6.2:-4431338 | None:intergenic |
| GAAATAGGATGATGAACCAT+AGG | 0.547060 | 6.2:-4429606 | None:intergenic |
| TAGCCTGTCTTTGAAATGCT+CGG | 0.558157 | 6.2:+4434181 | MS.gene54734:intron |
| GTTAGTGATTTGATAAATTG+CGG | 0.558621 | 6.2:+4432581 | MS.gene54734:CDS |
| AAATTTAGGTGAAGCTGTGA+CGG | 0.564748 | 6.2:+4435260 | MS.gene54734:intron |
| AGACTGGAGAGCTTCAAAGC+TGG | 0.565180 | 6.2:-4432895 | None:intergenic |
| TGTCTTCCATGATAATATCT+CGG | 0.565371 | 6.2:-4431350 | None:intergenic |
| TCTCCACTGGGCAAAAGATG+CGG | 0.571721 | 6.2:-4434236 | None:intergenic |
| TCTATAAACCGAGAAGGAAG+AGG | 0.573504 | 6.2:+4432650 | MS.gene54734:CDS |
| GTTGGATGGAAGTCGTCCCT+CGG | 0.578853 | 6.2:+4434648 | MS.gene54734:CDS |
| ACTCCGAGCATTTCAAAGAC+AGG | 0.582200 | 6.2:-4434184 | None:intergenic |
| AATGGAACTACCTTTGCAGA+TGG | 0.584157 | 6.2:-4434320 | None:intergenic |
| ATATAAAATATGGTGGGATG+GGG | 0.584393 | 6.2:+4431631 | MS.gene54734:CDS |
| AGCTGTGACGGTTGAAGACG+AGG | 0.589833 | 6.2:+4435272 | MS.gene54734:CDS |
| GATGCTCATATAAAATATGG+TGG | 0.591035 | 6.2:+4431624 | MS.gene54734:intron |
| GATGGATGAACTTTGGCAGA+TGG | 0.594277 | 6.2:-4434302 | None:intergenic |
| GTTGCTGTGATTATGGTGGG+TGG | 0.597160 | 6.2:+4429425 | MS.gene54734:CDS |
| GTTGTTGCTGTGATTATGGT+GGG | 0.598016 | 6.2:+4429422 | MS.gene54734:CDS |
| GATATACTATCACCTCTAGC+CGG | 0.602825 | 6.2:+4434010 | MS.gene54734:CDS |
| GACGGTTGAAGACGAGGTAG+TGG | 0.604103 | 6.2:+4435278 | MS.gene54734:CDS |
| AGTTGTTGCTGTGATTATGG+TGG | 0.607947 | 6.2:+4429421 | MS.gene54734:CDS |
| GATGTATCTATAAACCGAGA+AGG | 0.610583 | 6.2:+4432644 | MS.gene54734:CDS |
| GGGAGCAAATTAAAACTCCA+GGG | 0.613106 | 6.2:+4434071 | MS.gene54734:CDS |
| CAAAGTTCATCCATCTGCAA+AGG | 0.613328 | 6.2:+4434310 | MS.gene54734:CDS |
| GGTGATTACAGTGCAAAGCT+TGG | 0.619422 | 6.2:+4434855 | MS.gene54734:CDS |
| ATGCTCATATAAAATATGGT+GGG | 0.621849 | 6.2:+4431625 | MS.gene54734:CDS |
| ATGGTGGGTGGACCCACCAA+AGG | 0.622367 | 6.2:+4429437 | MS.gene54734:CDS |
| AAGCTCTCCAGTCTGCGACA+AGG | 0.625463 | 6.2:+4432904 | MS.gene54734:CDS |
| ACCATAGGTTGACCAGCCAA+AGG | 0.634250 | 6.2:-4429591 | None:intergenic |
| TGAAACCATATACCTTTGGT+GGG | 0.637039 | 6.2:-4429449 | None:intergenic |
| TATAGATACATCCTCGATGG+CGG | 0.641980 | 6.2:-4432633 | None:intergenic |
| GTTTATAGATACATCCTCGA+TGG | 0.646518 | 6.2:-4432636 | None:intergenic |
| TCAATGTAGATATTTGAAGG+AGG | 0.647526 | 6.2:+4431290 | MS.gene54734:intron |
| GGACGACTTCCATCCAACAA+TGG | 0.654903 | 6.2:-4434643 | None:intergenic |
| GTACACGTGACCATCTTCCG+AGG | 0.660691 | 6.2:-4434665 | None:intergenic |
| TCCACTGGGCAAAAGATGCG+GGG | 0.665970 | 6.2:-4434234 | None:intergenic |
| TACACGTGACCATCTTCCGA+GGG | 0.672551 | 6.2:-4434664 | None:intergenic |
| TTGAAGGAGGATAAACCACA+TGG | 0.681985 | 6.2:+4431303 | MS.gene54734:CDS |
| AGGCCACCTGCTGATCCATG+TGG | 0.684918 | 6.2:-4431318 | None:intergenic |
| ATATCTTATTGGATTCCATG+AGG | 0.687257 | 6.2:+4431107 | MS.gene54734:CDS |
| AAACCACATGGATCAGCAGG+TGG | 0.689006 | 6.2:+4431315 | MS.gene54734:CDS |
| CTGACATTAAGAATCTTGTG+AGG | 0.701260 | 6.2:-4435321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGTAATTAAAATAAAATAT+TGG | + | chr6.2:4430269-4430288 | MS.gene54734:intron | 10.0% |
| !! | GGTAATTAAAATAAAATATT+GGG | + | chr6.2:4430270-4430289 | MS.gene54734:intron | 10.0% |
| !! | TTTATATTATAAAGTTAAAC+TGG | + | chr6.2:4430419-4430438 | MS.gene54734:intron | 10.0% |
| !!! | TTATATGAATCTAAATATTT+TGG | + | chr6.2:4434415-4434434 | MS.gene54734:intron | 10.0% |
| !! | AAATTTATAGATAAGAAAAG+AGG | - | chr6.2:4435246-4435265 | None:intergenic | 15.0% |
| !! | AGTTCACATTATAATTAATA+AGG | + | chr6.2:4430249-4430268 | MS.gene54734:intron | 15.0% |
| !! | CTGAAACAATTAATTAAAAT+TGG | - | chr6.2:4434829-4434848 | None:intergenic | 15.0% |
| !! | TCAAATAAACCAATAAAAAA+TGG | + | chr6.2:4430168-4430187 | MS.gene54734:intron | 15.0% |
| !!! | AATAAGTTGAAAATAGTTTA+TGG | + | chr6.2:4430691-4430710 | MS.gene54734:intron | 15.0% |
| !!! | ACATTTTTTGTTCAATTTAA+AGG | + | chr6.2:4430899-4430918 | MS.gene54734:intron | 15.0% |
| !!! | ATAAGTTGAAAATAGTTTAT+GGG | + | chr6.2:4430692-4430711 | MS.gene54734:intron | 15.0% |
| !!! | ATAATCAAATCAGTTTTAAA+TGG | - | chr6.2:4432841-4432860 | None:intergenic | 15.0% |
| !!! | CAATTTTAATTAATTGTTTC+AGG | + | chr6.2:4434827-4434846 | MS.gene54734:intron | 15.0% |
| !!! | CTTTTCTTATCTATAAATTT+AGG | + | chr6.2:4435246-4435265 | MS.gene54734:intron | 15.0% |
| !!! | TCAACATTTTTTAATTTTGA+TGG | - | chr6.2:4432687-4432706 | None:intergenic | 15.0% |
| !!! | TTGATAAAAGTGTTTTTTAT+GGG | - | chr6.2:4430366-4430385 | None:intergenic | 15.0% |
| !!! | TTTTTTGTATTTGAGATTTT+GGG | + | chr6.2:4429490-4429509 | MS.gene54734:intron | 15.0% |
| !! | AAAAAGAATGCTAAAATTGT+TGG | + | chr6.2:4434263-4434282 | MS.gene54734:CDS | 20.0% |
| !! | AAAAGAAAAATATTCATTGC+TGG | + | chr6.2:4432479-4432498 | MS.gene54734:intron | 20.0% |
| !! | AAGATATATTTGAGCTAAAT+TGG | - | chr6.2:4431094-4431113 | None:intergenic | 20.0% |
| !! | AATATAAACTACAATCAGAA+TGG | - | chr6.2:4433553-4433572 | None:intergenic | 20.0% |
| !! | AGATATATTTGAGCTAAATT+GGG | - | chr6.2:4431093-4431112 | None:intergenic | 20.0% |
| !! | ATATCAATGTAGATATTTGA+AGG | + | chr6.2:4431287-4431306 | MS.gene54734:intron | 20.0% |
| !! | ATATGAAACAAATGATTTCT+GGG | + | chr6.2:4434051-4434070 | MS.gene54734:CDS | 20.0% |
| !! | ATATTAGAGTTGTTAAATAG+CGG | + | chr6.2:4432044-4432063 | MS.gene54734:intron | 20.0% |
| !! | ATTCATATAACCAGAAAATT+TGG | - | chr6.2:4434405-4434424 | None:intergenic | 20.0% |
| !! | ATTTATACTGTCAGTATATA+TGG | - | chr6.2:4431959-4431978 | None:intergenic | 20.0% |
| !! | TCAAATAAACCAATCAAAAA+TGG | + | chr6.2:4429898-4429917 | MS.gene54734:intron | 20.0% |
| !! | TTAGCTCAAATATATCTTAT+TGG | + | chr6.2:4431096-4431115 | MS.gene54734:CDS | 20.0% |
| !! | TTGATATTAGTAACACATTA+TGG | - | chr6.2:4431274-4431293 | None:intergenic | 20.0% |
| !! | TTTATAAAATCACGATAAAC+TGG | + | chr6.2:4430616-4430635 | MS.gene54734:intron | 20.0% |
| !!! | AAAAAGATTAAAAGCATGTT+TGG | - | chr6.2:4430799-4430818 | None:intergenic | 20.0% |
| !!! | CTTGATAAAAGTGTTTTTTA+TGG | - | chr6.2:4430367-4430386 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTATTTGAGATTT+TGG | + | chr6.2:4429489-4429508 | MS.gene54734:intron | 20.0% |
| !!! | GAGATTTAATTTTAGACTAA+CGG | - | chr6.2:4431005-4431024 | None:intergenic | 20.0% |
| !!! | TATAAGTTGAAAATAGCTTA+TGG | + | chr6.2:4430493-4430512 | MS.gene54734:intron | 20.0% |
| !!! | TTATGTAAAAGCTATTTCTA+CGG | + | chr6.2:4429731-4429750 | MS.gene54734:intron | 20.0% |
| ! | AAAATTAAATCTCTCAGCTT+CGG | + | chr6.2:4431012-4431031 | MS.gene54734:intron | 25.0% |
| ! | AAATCTATTCTGTGTAAACT+TGG | + | chr6.2:4433326-4433345 | MS.gene54734:intron | 25.0% |
| ! | AACATTATGAATGACAATTG+AGG | - | chr6.2:4429665-4429684 | None:intergenic | 25.0% |
| ! | AATAACAATTTACAGTATGC+AGG | + | chr6.2:4432559-4432578 | MS.gene54734:intron | 25.0% |
| ! | AATCTATTCTGTGTAAACTT+GGG | + | chr6.2:4433327-4433346 | MS.gene54734:intron | 25.0% |
| ! | ACAATATAATACTCTGTTCA+TGG | - | chr6.2:4433624-4433643 | None:intergenic | 25.0% |
| ! | ATGCTCATATAAAATATGGT+GGG | + | chr6.2:4431625-4431644 | MS.gene54734:CDS | 25.0% |
| ! | ATTAGTAACACATTATGGTT+AGG | - | chr6.2:4431269-4431288 | None:intergenic | 25.0% |
| ! | CAAATCAACATAGAAATTGA+AGG | - | chr6.2:4430219-4430238 | None:intergenic | 25.0% |
| ! | CACAAAATATTGTCAAATAG+CGG | + | chr6.2:4433212-4433231 | MS.gene54734:intron | 25.0% |
| ! | CATATGAAACAAATGATTTC+TGG | + | chr6.2:4434050-4434069 | MS.gene54734:CDS | 25.0% |
| ! | CATTGCAAAATTGTATCATT+GGG | - | chr6.2:4433452-4433471 | None:intergenic | 25.0% |
| ! | CTATAAAGACTGAATGTTAT+AGG | + | chr6.2:4434371-4434390 | MS.gene54734:intron | 25.0% |
| ! | CTATAACATTCAGTCTTTAT+AGG | - | chr6.2:4434373-4434392 | None:intergenic | 25.0% |
| ! | CTTATCTACAAAGATAAGTT+TGG | - | chr6.2:4430147-4430166 | None:intergenic | 25.0% |
| ! | GGTAAGTAAAAATTCGATAA+CGG | - | chr6.2:4434143-4434162 | None:intergenic | 25.0% |
| ! | GTAATCATAAATTCCATTGT+TGG | + | chr6.2:4434630-4434649 | MS.gene54734:CDS | 25.0% |
| ! | GTTAGTGATTTGATAAATTG+CGG | + | chr6.2:4432581-4432600 | MS.gene54734:CDS | 25.0% |
| ! | GTTGGTGCATAAATAAAATT+TGG | + | chr6.2:4431672-4431691 | MS.gene54734:intron | 25.0% |
| ! | GTTTGCAAAATACAAAAACT+TGG | + | chr6.2:4430842-4430861 | MS.gene54734:intron | 25.0% |
| ! | TATATATGAACTTTCGAAGA+TGG | - | chr6.2:4434349-4434368 | None:intergenic | 25.0% |
| ! | TATTATAGTAATCACCTTAC+AGG | - | chr6.2:4431183-4431202 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATCCAAAC+AGG | - | chr6.2:4434929-4434948 | None:intergenic | 25.0% |
| ! | TCATTGCAAAATTGTATCAT+TGG | - | chr6.2:4433453-4433472 | None:intergenic | 25.0% |
| ! | TGTATACAATTTCTTCTTTC+CGG | - | chr6.2:4434032-4434051 | None:intergenic | 25.0% |
| ! | TGTCATTAGTATATGTTATG+TGG | + | chr6.2:4430976-4430995 | MS.gene54734:intron | 25.0% |
| ! | TTGAAATTAAGGTATGGAAA+TGG | + | chr6.2:4434531-4434550 | MS.gene54734:intron | 25.0% |
| ! | TTTGAGAACTAGTAATAATG+TGG | - | chr6.2:4435182-4435201 | None:intergenic | 25.0% |
| !! | AAGATAATGCAGTTTTCAAA+GGG | - | chr6.2:4433924-4433943 | None:intergenic | 25.0% |
| !! | AATATGTTTTTCTTCTTGAC+AGG | + | chr6.2:4434599-4434618 | MS.gene54734:intron | 25.0% |
| !! | AATTGTTATTCTTCTTCTCT+AGG | - | chr6.2:4432549-4432568 | None:intergenic | 25.0% |
| !! | ACTACTTTAAGCTTTAATGT+TGG | + | chr6.2:4434116-4434135 | MS.gene54734:intron | 25.0% |
| !! | AGATTTCAACTCATTTTACT+TGG | - | chr6.2:4433504-4433523 | None:intergenic | 25.0% |
| !! | CGTGATTTTATAAAAACCAA+GGG | - | chr6.2:4430610-4430629 | None:intergenic | 25.0% |
| !! | GATTTCAACTCATTTTACTT+GGG | - | chr6.2:4433503-4433522 | None:intergenic | 25.0% |
| !! | TCATAAACTCGTACATTTTA+AGG | - | chr6.2:4433067-4433086 | None:intergenic | 25.0% |
| !! | TCGTGATTTTATAAAAACCA+AGG | - | chr6.2:4430611-4430630 | None:intergenic | 25.0% |
| !! | TGTATTTTGCAAACTAAAGT+TGG | - | chr6.2:4430836-4430855 | None:intergenic | 25.0% |
| !! | TGTTTTCGTATAAGTTATGT+TGG | + | chr6.2:4429777-4429796 | MS.gene54734:intron | 25.0% |
| !! | TTACATGCTTTGTTAAATTC+TGG | + | chr6.2:4431242-4431261 | MS.gene54734:intron | 25.0% |
| !! | TTTTAGCGATTAAACTTGAA+CGG | + | chr6.2:4430941-4430960 | MS.gene54734:intron | 25.0% |
| !!! | AGGTTTGCAATTTTAATTGT+TGG | + | chr6.2:4434746-4434765 | MS.gene54734:intron | 25.0% |
| !!! | AGTTTATATTTTTGCTGTAG+TGG | + | chr6.2:4433563-4433582 | MS.gene54734:intron | 25.0% |
| !!! | ATACAAAAACTTGGTGTTTT+TGG | + | chr6.2:4430851-4430870 | MS.gene54734:intron | 25.0% |
| !!! | ATGTAGATATTTTTTCCTTC+AGG | + | chr6.2:4433954-4433973 | MS.gene54734:intron | 25.0% |
| !!! | CTTTTAGTTTTCTCAATGTA+GGG | - | chr6.2:4430194-4430213 | None:intergenic | 25.0% |
| !!! | TTTTGTTGAATTTGATTTGC+AGG | + | chr6.2:4429522-4429541 | MS.gene54734:intron | 25.0% |
| !!! | TTTTTTATGGGCCTTAATAA+AGG | - | chr6.2:4430354-4430373 | None:intergenic | 25.0% |
| AAAAGTTGTTGCTGTGATTA+TGG | + | chr6.2:4429418-4429437 | MS.gene54734:CDS | 30.0% | |
| AAACTATCCTGGAAAACTTA+TGG | + | chr6.2:4430469-4430488 | MS.gene54734:intron | 30.0% | |
| AAGTGACATATAGTATCTGT+CGG | - | chr6.2:4432233-4432252 | None:intergenic | 30.0% | |
| AAGTTTGCAAAATCAGTATG+AGG | + | chr6.2:4434726-4434745 | MS.gene54734:intron | 30.0% | |
| AATTAATTGTTTCAGGCTGA+TGG | + | chr6.2:4434834-4434853 | MS.gene54734:intron | 30.0% | |
| ACGATGTTGAAATTAAGGTA+TGG | + | chr6.2:4434525-4434544 | MS.gene54734:intron | 30.0% | |
| ACTACTTCTAAACTAAGACA+TGG | - | chr6.2:4433406-4433425 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTAACAAC+TGG | - | chr6.2:4430772-4430791 | None:intergenic | 30.0% | |
| AGATAAGAAAAGAGGAACTA+AGG | - | chr6.2:4435238-4435257 | None:intergenic | 30.0% | |
| AGATTGTTTAAGAGAGCTTA+TGG | - | chr6.2:4430735-4430754 | None:intergenic | 30.0% | |
| AGCATATCACAAAACAATAG+CGG | - | chr6.2:4432104-4432123 | None:intergenic | 30.0% | |
| AGTTGTATCTTGCTCAATTT+CGG | + | chr6.2:4434204-4434223 | MS.gene54734:CDS | 30.0% | |
| ATAAGTTGTTCATCCAAACA+TGG | - | chr6.2:4429924-4429943 | None:intergenic | 30.0% | |
| ATATCTTATTGGATTCCATG+AGG | + | chr6.2:4431107-4431126 | MS.gene54734:CDS | 30.0% | |
| CCTACATTGAGAAAACTAAA+AGG | + | chr6.2:4430192-4430211 | MS.gene54734:intron | 30.0% | |
| CTACTTCTAAACTAAGACAT+GGG | - | chr6.2:4433405-4433424 | None:intergenic | 30.0% | |
| GATGCTCATATAAAATATGG+TGG | + | chr6.2:4431624-4431643 | MS.gene54734:intron | 30.0% | |
| GCAGATGCTCATATAAAATA+TGG | + | chr6.2:4431621-4431640 | MS.gene54734:intron | 30.0% | |
| TAATATCTCGGAAGTAGTAA+AGG | - | chr6.2:4431341-4431360 | None:intergenic | 30.0% | |
| TACTTCTAAACTAAGACATG+GGG | - | chr6.2:4433404-4433423 | None:intergenic | 30.0% | |
| TATGTTAGTTAAACCCTGTT+CGG | + | chr6.2:4430321-4430340 | MS.gene54734:intron | 30.0% | |
| TCAATGTAGATATTTGAAGG+AGG | + | chr6.2:4431290-4431309 | MS.gene54734:intron | 30.0% | |
| TCATAAATTCCATTGTTGGA+TGG | + | chr6.2:4434634-4434653 | MS.gene54734:CDS | 30.0% | |
| TCCAGTCTTACAAAATCTTT+AGG | - | chr6.2:4433986-4434005 | None:intergenic | 30.0% | |
| TCGGATAAACACCTTTATTA+AGG | + | chr6.2:4430340-4430359 | MS.gene54734:intron | 30.0% | |
| TCTATAGCATTATTGTGTAG+TGG | + | chr6.2:4432163-4432182 | MS.gene54734:intron | 30.0% | |
| TGTCTTCCATGATAATATCT+CGG | - | chr6.2:4431353-4431372 | None:intergenic | 30.0% | |
| TTAGCAACAGTAAGATTGAA+CGG | - | chr6.2:4434806-4434825 | None:intergenic | 30.0% | |
| ! | AATGAGTTGAAAACAGCTTA+TGG | + | chr6.2:4431843-4431862 | MS.gene54734:intron | 30.0% |
| ! | AATTTTGTCAATCGTGTGAT+TGG | + | chr6.2:4434774-4434793 | MS.gene54734:intron | 30.0% |
| ! | AGGCTATCTAAAATAGCTTA+TGG | - | chr6.2:4431818-4431837 | None:intergenic | 30.0% |
| ! | AGTTGTTTCATAAACTATCC+TGG | + | chr6.2:4430458-4430477 | MS.gene54734:intron | 30.0% |
| ! | ATATAAAATATGGTGGGATG+GGG | + | chr6.2:4431631-4431650 | MS.gene54734:CDS | 30.0% |
| ! | CATATAAAATATGGTGGGAT+GGG | + | chr6.2:4431630-4431649 | MS.gene54734:CDS | 30.0% |
| ! | CTTATATCCATAAGTTTTCC+AGG | - | chr6.2:4430479-4430498 | None:intergenic | 30.0% |
| ! | GAAGATAATGCAGTTTTCAA+AGG | - | chr6.2:4433925-4433944 | None:intergenic | 30.0% |
| ! | GGATAGAAAACCAAATTTTC+TGG | + | chr6.2:4434392-4434411 | MS.gene54734:intron | 30.0% |
| ! | GTAAAATGAGTTGAAATCTC+TGG | + | chr6.2:4433505-4433524 | MS.gene54734:intron | 30.0% |
| ! | TCATATAAAATATGGTGGGA+TGG | + | chr6.2:4431629-4431648 | MS.gene54734:CDS | 30.0% |
| ! | TCCTAAAGATTTTGTAAGAC+TGG | + | chr6.2:4433982-4434001 | MS.gene54734:CDS | 30.0% |
| ! | TGGTTTTCCATCAATAAACT+AGG | - | chr6.2:4432267-4432286 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr6.2:4429864-4429883 | None:intergenic | 30.0% |
| !! | ATCCTATTTCTGCTTGTAAA+AGG | + | chr6.2:4429619-4429638 | MS.gene54734:CDS | 30.0% |
| !! | ATTTTGGCATGAAAACAGAT+TGG | + | chr6.2:4434431-4434450 | MS.gene54734:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr6.2:4429863-4429882 | None:intergenic | 30.0% |
| !! | TCCTATTTCTGCTTGTAAAA+GGG | + | chr6.2:4429620-4429639 | MS.gene54734:CDS | 30.0% |
| !! | TTTGGAGTATTGAAAGAAAG+TGG | - | chr6.2:4429561-4429580 | None:intergenic | 30.0% |
| !!! | AATGTAGGGCCATTTTTTAT+TGG | - | chr6.2:4430180-4430199 | None:intergenic | 30.0% |
| !!! | ACTTGTTTTGTAAGCTACTA+TGG | - | chr6.2:4435055-4435074 | None:intergenic | 30.0% |
| !!! | CCTTTTAGTTTTCTCAATGT+AGG | - | chr6.2:4430195-4430214 | None:intergenic | 30.0% |
| AAATTTAGGTGAAGCTGTGA+CGG | + | chr6.2:4435260-4435279 | MS.gene54734:intron | 35.0% | |
| AAGCTATCTTGAAGAGCTTA+GGG | + | chr6.2:4430667-4430686 | MS.gene54734:intron | 35.0% | |
| ACAATGTTAGTGATCAAGGT+TGG | + | chr6.2:4431654-4431673 | MS.gene54734:intron | 35.0% | |
| AGAAAAGCAATGTTCCTAAC+TGG | - | chr6.2:4431378-4431397 | None:intergenic | 35.0% | |
| AGACTGTTTGAAAGAGCTTA+TGG | - | chr6.2:4430537-4430556 | None:intergenic | 35.0% | |
| AGTCTTACAAGTGCTTATGT+CGG | + | chr6.2:4431901-4431920 | MS.gene54734:intron | 35.0% | |
| ATAACAAAACAAACCGCGTT+TGG | - | chr6.2:4435158-4435177 | None:intergenic | 35.0% | |
| ATAAGCTGTTGATCCAAACA+GGG | - | chr6.2:4429699-4429718 | None:intergenic | 35.0% | |
| ATGAAACCATATACCTTTGG+TGG | - | chr6.2:4429453-4429472 | None:intergenic | 35.0% | |
| ATGAGCTGAAATTACCTGTA+AGG | + | chr6.2:4431166-4431185 | MS.gene54734:CDS | 35.0% | |
| ATTCATGACAGCTTTCTCAA+AGG | + | chr6.2:4432967-4432986 | MS.gene54734:intron | 35.0% | |
| CAATCAAAAATGGCCATGTT+TGG | + | chr6.2:4429908-4429927 | MS.gene54734:intron | 35.0% | |
| CACATTAGAACCAATATGTC+AGG | - | chr6.2:4433011-4433030 | None:intergenic | 35.0% | |
| CCAATGAAACCATATACCTT+TGG | - | chr6.2:4429456-4429475 | None:intergenic | 35.0% | |
| CTACTTCCGAGATATTATCA+TGG | + | chr6.2:4431344-4431363 | MS.gene54734:CDS | 35.0% | |
| CTGAAAACAGCTTATGAACA+TGG | - | chr6.2:4433874-4433893 | None:intergenic | 35.0% | |
| CTGACATTAAGAATCTTGTG+AGG | - | chr6.2:4435324-4435343 | None:intergenic | 35.0% | |
| CTTGGACGATGTTGAAATTA+AGG | + | chr6.2:4434520-4434539 | MS.gene54734:CDS | 35.0% | |
| GAAATAGGATGATGAACCAT+AGG | - | chr6.2:4429609-4429628 | None:intergenic | 35.0% | |
| GACATTTGTGAGTATCTGTT+TGG | + | chr6.2:4432414-4432433 | MS.gene54734:intron | 35.0% | |
| GAGATTACATCACATATCTC+AGG | - | chr6.2:4434560-4434579 | None:intergenic | 35.0% | |
| GAGCATCTGCAAAAAGAAAA+AGG | - | chr6.2:4431611-4431630 | None:intergenic | 35.0% | |
| GAGTCTCTACATTCTACTTT+GGG | + | chr6.2:4433763-4433782 | MS.gene54734:intron | 35.0% | |
| GATACTATGTAATCTTACCC+TGG | - | chr6.2:4434091-4434110 | None:intergenic | 35.0% | |
| GATGCATCCTAGTTTATTGA+TGG | + | chr6.2:4432257-4432276 | MS.gene54734:intron | 35.0% | |
| GATGTATCTATAAACCGAGA+AGG | + | chr6.2:4432644-4432663 | MS.gene54734:CDS | 35.0% | |
| GCTTATAGCATGAGTTCTTA+TGG | - | chr6.2:4435116-4435135 | None:intergenic | 35.0% | |
| GCTTCAGTAGTGTTAAATAG+CGG | + | chr6.2:4433115-4433134 | MS.gene54734:intron | 35.0% | |
| GTGTCTATGTTCTAACTGAT+AGG | + | chr6.2:4431440-4431459 | MS.gene54734:intron | 35.0% | |
| GTTTATAGATACATCCTCGA+TGG | - | chr6.2:4432639-4432658 | None:intergenic | 35.0% | |
| TAAGCACTTGTAAGACTGTT+TGG | - | chr6.2:4431898-4431917 | None:intergenic | 35.0% | |
| TAAGCTATCTTGAAGAGCTT+AGG | + | chr6.2:4430666-4430685 | MS.gene54734:intron | 35.0% | |
| TATATATGGCCTGTTTGGAT+TGG | - | chr6.2:4431945-4431964 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr6.2:4431933-4431952 | MS.gene54734:intron | 35.0% | |
| TGAAACCATATACCTTTGGT+GGG | - | chr6.2:4429452-4429471 | None:intergenic | 35.0% | |
| TGAGTCTCTACATTCTACTT+TGG | + | chr6.2:4433762-4433781 | MS.gene54734:intron | 35.0% | |
| TGCAGCATACATCACAATTT+AGG | - | chr6.2:4431499-4431518 | None:intergenic | 35.0% | |
| TTAATCCAAACAGGCACAAA+AGG | - | chr6.2:4434920-4434939 | None:intergenic | 35.0% | |
| ! | AACTACAATCAGAATGGACT+CGG | - | chr6.2:4433547-4433566 | None:intergenic | 35.0% |
| ! | ACCCTTTTACAAGCAGAAAT+AGG | - | chr6.2:4429624-4429643 | None:intergenic | 35.0% |
| ! | ATAATGCAGTTTTCAAAGGG+AGG | - | chr6.2:4433921-4433940 | None:intergenic | 35.0% |
| ! | ATGTTTTCATGCTCCTTATG+GGG | + | chr6.2:4432286-4432305 | MS.gene54734:intron | 35.0% |
| ! | ATTCTTTTTACCATCTCCAC+TGG | - | chr6.2:4434252-4434271 | None:intergenic | 35.0% |
| ! | ATTGGGTTGTTCATGATTTC+TGG | - | chr6.2:4433435-4433454 | None:intergenic | 35.0% |
| ! | CATGTTTTCATGCTCCTTAT+GGG | + | chr6.2:4432285-4432304 | MS.gene54734:intron | 35.0% |
| ! | CCAAAGGTATATGGTTTCAT+TGG | + | chr6.2:4429453-4429472 | MS.gene54734:intron | 35.0% |
| ! | TAATGCAGTTTTCAAAGGGA+GGG | - | chr6.2:4433920-4433939 | None:intergenic | 35.0% |
| ! | TGTTTTCAACTCATTTCCAC+AGG | - | chr6.2:4431838-4431857 | None:intergenic | 35.0% |
| ! | TTCTTTTTACCATCTCCACT+GGG | - | chr6.2:4434251-4434270 | None:intergenic | 35.0% |
| !! | AAGCTATTTTAGATAGCCTG+TGG | + | chr6.2:4431819-4431838 | MS.gene54734:intron | 35.0% |
| !! | AGGAACATTGCTTTTCTGAT+TGG | + | chr6.2:4431381-4431400 | MS.gene54734:intron | 35.0% |
| !! | ATAAAGGTGTTTATCCGAAC+AGG | - | chr6.2:4430338-4430357 | None:intergenic | 35.0% |
| !! | CATATTGGTTCTAATGTGCA+TGG | + | chr6.2:4433013-4433032 | MS.gene54734:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr6.2:4430042-4430061 | MS.gene54734:intron | 35.0% |
| !! | TAAAGGTGTTTATCCGAACA+GGG | - | chr6.2:4430337-4430356 | None:intergenic | 35.0% |
| !!! | CAAACATGGCCATTTTTGAT+TGG | - | chr6.2:4429910-4429929 | None:intergenic | 35.0% |
| !!! | TAGATGTGTTTTTCTAGAGC+AGG | + | chr6.2:4430294-4430313 | MS.gene54734:intron | 35.0% |
| !!! | TTAAGCTGTTTTTCCAAACG+CGG | + | chr6.2:4435142-4435161 | MS.gene54734:intron | 35.0% |
| AACCAAGGGACTGTTTGAAT+TGG | - | chr6.2:4430596-4430615 | None:intergenic | 40.0% | |
| AACTTTCGAAGATGGACGAA+TGG | - | chr6.2:4434341-4434360 | None:intergenic | 40.0% | |
| AAGCTACTATGGAGAGCTTA+CGG | - | chr6.2:4435044-4435063 | None:intergenic | 40.0% | |
| AAGCTTGGCATAACCATTCT+AGG | + | chr6.2:4434870-4434889 | MS.gene54734:CDS | 40.0% | |
| AAGGCAGATAAGCATAGAAG+AGG | - | chr6.2:4434901-4434920 | None:intergenic | 40.0% | |
| AATGCATGTGCCTGACATAT+TGG | + | chr6.2:4432998-4433017 | MS.gene54734:intron | 40.0% | |
| AATGGAACTACCTTTGCAGA+TGG | - | chr6.2:4434323-4434342 | None:intergenic | 40.0% | |
| AATTTCTTCTTTCCGGCTAG+AGG | - | chr6.2:4434025-4434044 | None:intergenic | 40.0% | |
| ACAGCTTATGAACATGGCAT+AGG | - | chr6.2:4433868-4433887 | None:intergenic | 40.0% | |
| AGCAACATACTTACCAAGCA+TGG | - | chr6.2:4431537-4431556 | None:intergenic | 40.0% | |
| AGGCAGATAAGCATAGAAGA+GGG | - | chr6.2:4434900-4434919 | None:intergenic | 40.0% | |
| AGTTGTTGCTGTGATTATGG+TGG | + | chr6.2:4429421-4429440 | MS.gene54734:CDS | 40.0% | |
| CAAAGTTCATCCATCTGCAA+AGG | + | chr6.2:4434310-4434329 | MS.gene54734:CDS | 40.0% | |
| CAGATACTCACAAATGTCTC+AGG | - | chr6.2:4432412-4432431 | None:intergenic | 40.0% | |
| CATAAGCTATCTTGGAGAAG+TGG | + | chr6.2:4430050-4430069 | MS.gene54734:intron | 40.0% | |
| CTATTCACGCAAAGCGTATA+TGG | - | chr6.2:4434164-4434183 | None:intergenic | 40.0% | |
| CTTTGCAGATGGATGAACTT+TGG | - | chr6.2:4434312-4434331 | None:intergenic | 40.0% | |
| GATAAGCTGTTGATCCAAAC+AGG | - | chr6.2:4429700-4429719 | None:intergenic | 40.0% | |
| GATATACTATCACCTCTAGC+CGG | + | chr6.2:4434010-4434029 | MS.gene54734:CDS | 40.0% | |
| GGGAGCAAATTAAAACTCCA+GGG | + | chr6.2:4434071-4434090 | MS.gene54734:CDS | 40.0% | |
| GTCAGTATATATGGCCTGTT+TGG | - | chr6.2:4431950-4431969 | None:intergenic | 40.0% | |
| GTGTTAAATAGCGGCTATAC+CGG | + | chr6.2:4433124-4433143 | MS.gene54734:intron | 40.0% | |
| GTGTTGTCAATTGCAGATTG+CGG | - | chr6.2:4433293-4433312 | None:intergenic | 40.0% | |
| GTTAATCGGTTGTATCGTCT+TGG | + | chr6.2:4434502-4434521 | MS.gene54734:CDS | 40.0% | |
| GTTGTTGCTGTGATTATGGT+GGG | + | chr6.2:4429422-4429441 | MS.gene54734:CDS | 40.0% | |
| TATAGATACATCCTCGATGG+CGG | - | chr6.2:4432636-4432655 | None:intergenic | 40.0% | |
| TCAGTTAGAACATAGACACG+TGG | - | chr6.2:4431439-4431458 | None:intergenic | 40.0% | |
| TCTATAAACCGAGAAGGAAG+AGG | + | chr6.2:4432650-4432669 | MS.gene54734:CDS | 40.0% | |
| TGCAGCAATTCATGAGTTTC+TGG | - | chr6.2:4432376-4432395 | None:intergenic | 40.0% | |
| TGGGAGCAAATTAAAACTCC+AGG | + | chr6.2:4434070-4434089 | MS.gene54734:CDS | 40.0% | |
| TTACCAAGCATGGATGATAG+TGG | - | chr6.2:4431527-4431546 | None:intergenic | 40.0% | |
| TTCTTGATTACGTCCCTGTT+TGG | + | chr6.2:4429683-4429702 | MS.gene54734:intron | 40.0% | |
| TTGAAGGAGGATAAACCACA+TGG | + | chr6.2:4431303-4431322 | MS.gene54734:CDS | 40.0% | |
| TTGACCAGCCAAAGGAAAAA+GGG | - | chr6.2:4429586-4429605 | None:intergenic | 40.0% | |
| TTGGCTGAGATGGAAACATT+TGG | - | chr6.2:4434458-4434477 | None:intergenic | 40.0% | |
| TTTCCACTATCATCCATGCT+TGG | + | chr6.2:4431521-4431540 | MS.gene54734:CDS | 40.0% | |
| ! | ATCTTTAGGAAGAGTCCTGA+AGG | - | chr6.2:4433972-4433991 | None:intergenic | 40.0% |
| ! | CATTCTACTTTGGGCTTGTT+TGG | + | chr6.2:4433772-4433791 | MS.gene54734:intron | 40.0% |
| ! | CCATAAGGAGCATGAAAACA+TGG | - | chr6.2:4432287-4432306 | None:intergenic | 40.0% |
| ! | CCATGTTTTCATGCTCCTTA+TGG | + | chr6.2:4432284-4432303 | MS.gene54734:intron | 40.0% |
| ! | GATTATATTGACTGCACCAC+AGG | + | chr6.2:4432855-4432874 | MS.gene54734:intron | 40.0% |
| ! | TCCAAAACCCCTTTTTCCTT+TGG | + | chr6.2:4429575-4429594 | MS.gene54734:CDS | 40.0% |
| ! | TCTTCTCTAGGTATTGTCGA+CGG | - | chr6.2:4432537-4432556 | None:intergenic | 40.0% |
| ! | TGCTTTTAGCCATCATCATC+AGG | - | chr6.2:4430878-4430897 | None:intergenic | 40.0% |
| !! | TAGCCTGTCTTTGAAATGCT+CGG | + | chr6.2:4434181-4434200 | MS.gene54734:intron | 40.0% |
| !!! | GTTTTTGGTCCTGATGATGA+TGG | + | chr6.2:4430866-4430885 | MS.gene54734:intron | 40.0% |
| AAGTCGTCGTAGATTACCTG+TGG | - | chr6.2:4432874-4432893 | None:intergenic | 45.0% | |
| ACTCCGAGCATTTCAAAGAC+AGG | - | chr6.2:4434187-4434206 | None:intergenic | 45.0% | |
| AGAACATCCACAACCCCATA+AGG | - | chr6.2:4432302-4432321 | None:intergenic | 45.0% | |
| AGACTGTTTGAGAGAGCTCA+TGG | + | chr6.2:4434976-4434995 | MS.gene54734:intron | 45.0% | |
| AGCCAATTCAAACAGTCCCT+TGG | + | chr6.2:4430591-4430610 | MS.gene54734:intron | 45.0% | |
| ATCTCAGCCAATGTTCGTGT+TGG | + | chr6.2:4434467-4434486 | MS.gene54734:CDS | 45.0% | |
| ATGATTCCAACATGCCAACG+AGG | + | chr6.2:4433469-4433488 | MS.gene54734:intron | 45.0% | |
| ATGCTGTAGCACTATAACGC+CGG | - | chr6.2:4433146-4433165 | None:intergenic | 45.0% | |
| CATGCAACAGTGCTATAGCA+GGG | - | chr6.2:4433244-4433263 | None:intergenic | 45.0% | |
| GAGACAAACCTCTTCCTTCT+CGG | - | chr6.2:4432661-4432680 | None:intergenic | 45.0% | |
| GATAAACCACATGGATCAGC+AGG | + | chr6.2:4431312-4431331 | MS.gene54734:CDS | 45.0% | |
| GATGGATGAACTTTGGCAGA+TGG | - | chr6.2:4434305-4434324 | None:intergenic | 45.0% | |
| GCTATAGCAGTATAGCGTAG+TGG | + | chr6.2:4432066-4432085 | MS.gene54734:intron | 45.0% | |
| GCTGAATCTGCTAACCAGTT+CGG | + | chr6.2:4432334-4432353 | MS.gene54734:CDS | 45.0% | |
| GGGGACAATGTTAGTGATCA+AGG | + | chr6.2:4431650-4431669 | MS.gene54734:CDS | 45.0% | |
| GGGTTGTGGATGTTCTGTAT+AGG | + | chr6.2:4432306-4432325 | MS.gene54734:intron | 45.0% | |
| GGTGATTACAGTGCAAAGCT+TGG | + | chr6.2:4434855-4434874 | MS.gene54734:CDS | 45.0% | |
| GTTGACCAGCCAAAGGAAAA+AGG | - | chr6.2:4429587-4429606 | None:intergenic | 45.0% | |
| TAATCAACCTTGTCGCAGAC+TGG | - | chr6.2:4432914-4432933 | None:intergenic | 45.0% | |
| TCATGGAAGACAGTCCAGTT+AGG | + | chr6.2:4431361-4431380 | MS.gene54734:intron | 45.0% | |
| TGACCAGCCAAAGGAAAAAG+GGG | - | chr6.2:4429585-4429604 | None:intergenic | 45.0% | |
| TTGAAATCTCTGGTCCGATC+TGG | + | chr6.2:4433515-4433534 | MS.gene54734:intron | 45.0% | |
| TTGCAGATTGCGGAAACTAG+CGG | - | chr6.2:4433283-4433302 | None:intergenic | 45.0% | |
| ! | AAACCCCTTTTTCCTTTGGC+TGG | + | chr6.2:4429579-4429598 | MS.gene54734:CDS | 45.0% |
| ! | AACACGAACATTGGCTGAGA+TGG | - | chr6.2:4434468-4434487 | None:intergenic | 45.0% |
| ! | AAGACTGTTTGGAGCACTTG+TGG | - | chr6.2:4431887-4431906 | None:intergenic | 45.0% |
| ! | AGAAGAGGGTGTACCTAGAA+TGG | - | chr6.2:4434886-4434905 | None:intergenic | 45.0% |
| ! | ATCTGCCTTTTGTGCCTGTT+TGG | + | chr6.2:4434912-4434931 | MS.gene54734:intron | 45.0% |
| ! | GCCAAAGGAAAAAGGGGTTT+TGG | - | chr6.2:4429579-4429598 | None:intergenic | 45.0% |
| ! | TCGATGGCGGCAAAAATATC+AGG | - | chr6.2:4432623-4432642 | None:intergenic | 45.0% |
| !! | TGATATTTTTGCCGCCATCG+AGG | + | chr6.2:4432622-4432641 | MS.gene54734:CDS | 45.0% |
| AAACCACATGGATCAGCAGG+TGG | + | chr6.2:4431315-4431334 | MS.gene54734:CDS | 50.0% | |
| AGACTGGAGAGCTTCAAAGC+TGG | - | chr6.2:4432898-4432917 | None:intergenic | 50.0% | |
| CCATGCAACAGTGCTATAGC+AGG | - | chr6.2:4433245-4433264 | None:intergenic | 50.0% | |
| CCTGCTATAGCACTGTTGCA+TGG | + | chr6.2:4433242-4433261 | MS.gene54734:intron | 50.0% | |
| CGTTTACCTCGTTGGCATGT+TGG | - | chr6.2:4433478-4433497 | None:intergenic | 50.0% | |
| CTAGAGTCTACGCGAACTCA+TGG | - | chr6.2:4433731-4433750 | None:intergenic | 50.0% | |
| CTTGGGTTCGTTTACCTCGT+TGG | - | chr6.2:4433486-4433505 | None:intergenic | 50.0% | |
| GAGCGAAATCTCGTTCCTCA+TGG | - | chr6.2:4431125-4431144 | None:intergenic | 50.0% | |
| GGACGACTTCCATCCAACAA+TGG | - | chr6.2:4434646-4434665 | None:intergenic | 50.0% | |
| GGACTCGGATCAAACCAGAT+CGG | - | chr6.2:4433532-4433551 | None:intergenic | 50.0% | |
| TACACGTGACCATCTTCCGA+GGG | - | chr6.2:4434667-4434686 | None:intergenic | 50.0% | |
| TCATGCTCCTTATGGGGTTG+TGG | + | chr6.2:4432292-4432311 | MS.gene54734:intron | 50.0% | |
| TCTCCACTGGGCAAAAGATG+CGG | - | chr6.2:4434239-4434258 | None:intergenic | 50.0% | |
| TTGTGCTGAACAGCGTATCG+CGG | - | chr6.2:4433197-4433216 | None:intergenic | 50.0% | |
| ! | ACCATAGGTTGACCAGCCAA+AGG | - | chr6.2:4429594-4429613 | None:intergenic | 50.0% |
| ! | CATCTTTTGCCCAGTGGAGA+TGG | + | chr6.2:4434239-4434258 | MS.gene54734:CDS | 50.0% |
| ! | GTGGACCCACCAAAGGTATA+TGG | + | chr6.2:4429444-4429463 | MS.gene54734:intron | 50.0% |
| ! | GTTGCTGTGATTATGGTGGG+TGG | + | chr6.2:4429425-4429444 | MS.gene54734:CDS | 50.0% |
| ! | TCCTTTGGCTGGTCAACCTA+TGG | + | chr6.2:4429590-4429609 | MS.gene54734:CDS | 50.0% |
| ! | TGCTAACCAGTTCGGTGAGT+TGG | + | chr6.2:4432342-4432361 | MS.gene54734:CDS | 50.0% |
| AAGCTCTCCAGTCTGCGACA+AGG | + | chr6.2:4432904-4432923 | MS.gene54734:CDS | 55.0% | |
| AGCTGTGACGGTTGAAGACG+AGG | + | chr6.2:4435272-4435291 | MS.gene54734:CDS | 55.0% | |
| CAGCAACCAACTCACCGAAC+TGG | - | chr6.2:4432351-4432370 | None:intergenic | 55.0% | |
| CGGAAGATGGTCACGTGTAC+AGG | + | chr6.2:4434668-4434687 | MS.gene54734:CDS | 55.0% | |
| CTCCACTGGGCAAAAGATGC+GGG | - | chr6.2:4434238-4434257 | None:intergenic | 55.0% | |
| GACGGTTGAAGACGAGGTAG+TGG | + | chr6.2:4435278-4435297 | MS.gene54734:CDS | 55.0% | |
| GCCAGCACCAACACGAACAT+TGG | - | chr6.2:4434477-4434496 | None:intergenic | 55.0% | |
| GTACACGTGACCATCTTCCG+AGG | - | chr6.2:4434668-4434687 | None:intergenic | 55.0% | |
| GTTGGATGGAAGTCGTCCCT+CGG | + | chr6.2:4434648-4434667 | MS.gene54734:CDS | 55.0% | |
| TCCACTGGGCAAAAGATGCG+GGG | - | chr6.2:4434237-4434256 | None:intergenic | 55.0% | |
| TGTGCTGAACAGCGTATCGC+GGG | - | chr6.2:4433196-4433215 | None:intergenic | 55.0% | |
| ! | GCCAATGTTCGTGTTGGTGC+TGG | + | chr6.2:4434473-4434492 | MS.gene54734:CDS | 55.0% |
| !! | GGTGCTGGCGTCAGGTTAAT+CGG | + | chr6.2:4434488-4434507 | MS.gene54734:CDS | 55.0% |
| AGGCCACCTGCTGATCCATG+TGG | - | chr6.2:4431321-4431340 | None:intergenic | 60.0% | |
| GGAAGTCGTCCCTCGGAAGA+TGG | + | chr6.2:4434655-4434674 | MS.gene54734:CDS | 60.0% | |
| ! | TCCCCGCATCTTTTGCCCAG+TGG | + | chr6.2:4434233-4434252 | MS.gene54734:CDS | 60.0% |
| !! | ATGGTGGGTGGACCCACCAA+AGG | + | chr6.2:4429437-4429456 | MS.gene54734:CDS | 60.0% |
| !! | TTCGTGTTGGTGCTGGCGTC+AGG | + | chr6.2:4434480-4434499 | MS.gene54734:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 4429404 | 4435368 | 4429404 | ID=MS.gene54734 |
| chr6.2 | mRNA | 4429404 | 4435368 | 4429404 | ID=MS.gene54734.t1;Parent=MS.gene54734 |
| chr6.2 | exon | 4429404 | 4429458 | 4429404 | ID=MS.gene54734.t1.exon1;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4429404 | 4429458 | 4429404 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4429544 | 4429641 | 4429544 | ID=MS.gene54734.t1.exon2;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4429544 | 4429641 | 4429544 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4431087 | 4431187 | 4431087 | ID=MS.gene54734.t1.exon3;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4431087 | 4431187 | 4431087 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4431299 | 4431377 | 4431299 | ID=MS.gene54734.t1.exon4;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4431299 | 4431377 | 4431299 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4431482 | 4431542 | 4431482 | ID=MS.gene54734.t1.exon5;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4431482 | 4431542 | 4431482 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4431625 | 4431671 | 4431625 | ID=MS.gene54734.t1.exon6;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4431625 | 4431671 | 4431625 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4432328 | 4432420 | 4432328 | ID=MS.gene54734.t1.exon7;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4432328 | 4432420 | 4432328 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4432581 | 4432671 | 4432581 | ID=MS.gene54734.t1.exon8;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4432581 | 4432671 | 4432581 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4432877 | 4432925 | 4432877 | ID=MS.gene54734.t1.exon9;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4432877 | 4432925 | 4432877 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4433976 | 4434092 | 4433976 | ID=MS.gene54734.t1.exon10;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4433976 | 4434092 | 4433976 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4434184 | 4434331 | 4434184 | ID=MS.gene54734.t1.exon11;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4434184 | 4434331 | 4434184 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4434449 | 4434541 | 4434449 | ID=MS.gene54734.t1.exon12;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4434449 | 4434541 | 4434449 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4434621 | 4434689 | 4434621 | ID=MS.gene54734.t1.exon13;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4434621 | 4434689 | 4434621 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4434849 | 4434891 | 4434849 | ID=MS.gene54734.t1.exon14;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4434849 | 4434891 | 4434849 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| chr6.2 | exon | 4435268 | 4435368 | 4435268 | ID=MS.gene54734.t1.exon15;Parent=MS.gene54734.t1 |
| chr6.2 | CDS | 4435268 | 4435368 | 4435268 | ID=cds.MS.gene54734.t1;Parent=MS.gene54734.t1 |
| Gene Sequence |
| Protein sequence |
