Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055603.t1 | XP_024637040.1 | 58.8 | 165 | 67 | 1 | 6 | 170 | 3 | 166 | 1.30E-36 | 162.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055603.t1 | A0A072UKD9 | 56.4 | 149 | 65 | 0 | 22 | 170 | 6 | 154 | 2.6e-31 | 144.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene055603 | 0.805327 | 1.41E-49 | -1.69E-46 |
| MS.gene049786 | MS.gene055603 | 0.814819 | 1.27E-51 | -1.69E-46 |
| MS.gene050069 | MS.gene055603 | 0.8047 | 1.90E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene055603 | 0.829162 | 6.00E-55 | -1.69E-46 |
| MS.gene050317 | MS.gene055603 | 0.803968 | 2.71E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene055603 | 0.809921 | 1.49E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene055603 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene051676 | MS.gene055603 | 0.812235 | 4.69E-51 | -1.69E-46 |
| MS.gene051757 | MS.gene055603 | 0.81475 | 1.31E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene055603 | 0.832673 | 8.26E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene055603 | 0.864416 | 1.24E-64 | -1.69E-46 |
| MS.gene052434 | MS.gene055603 | 0.826167 | 3.15E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene055603 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene055603 | 0.81678 | 4.63E-52 | -1.69E-46 |
| MS.gene05469 | MS.gene055603 | 0.83351 | 5.12E-56 | -1.69E-46 |
| MS.gene055311 | MS.gene055603 | 0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene055603 | 0.820452 | 6.81E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene055603 | 0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene056403 | 0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene05659 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene056605 | 0.843675 | 1.21E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene056638 | 0.833684 | 4.63E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene056787 | 0.816265 | 6.04E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene056901 | 0.878251 | 3.27E-69 | -1.69E-46 |
| MS.gene055603 | MS.gene056986 | 0.873939 | 9.96E-68 | -1.69E-46 |
| MS.gene055603 | MS.gene057094 | 0.805807 | 1.12E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene057360 | 0.830257 | 3.25E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene058238 | 0.825643 | 4.19E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene059360 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene06001 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene06010 | 0.80365 | 3.15E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene06011 | 0.867702 | 1.13E-65 | -1.69E-46 |
| MS.gene055603 | MS.gene060586 | 0.833255 | 5.92E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene060763 | 0.815353 | 9.65E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene060830 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene06131 | 0.847502 | 1.11E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene06166 | 0.828993 | 6.60E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene061898 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene062292 | 0.824161 | 9.38E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene06322 | 0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene063245 | 0.822149 | 2.77E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene063247 | 0.827084 | 1.90E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene06324 | 0.815321 | 9.81E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene063385 | 0.805055 | 1.61E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene064038 | 0.803316 | 3.69E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene064562 | 0.8071 | 5.96E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene064717 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene065072 | 0.849574 | 2.96E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene065159 | 0.845656 | 3.54E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene065504 | 0.834223 | 3.39E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene066033 | 0.835446 | 1.67E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene066035 | 0.852915 | 3.37E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene066319 | 0.806558 | 7.76E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene066405 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene066719 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene066836 | 0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene067583 | 0.808147 | 3.57E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene067982 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene068752 | 0.818475 | 1.92E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene069002 | 0.828288 | 9.77E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene069065 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene06982 | 0.809873 | 1.53E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene07038 | 0.805947 | 1.04E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene07084 | 0.804662 | 1.94E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene07088 | 0.845038 | 5.21E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene07101 | 0.827028 | 1.96E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene071985 | 0.867757 | 1.08E-65 | -1.69E-46 |
| MS.gene055603 | MS.gene071987 | 0.855578 | 5.74E-62 | -1.69E-46 |
| MS.gene055603 | MS.gene072057 | 0.838845 | 2.26E-57 | -1.69E-46 |
| MS.gene055603 | MS.gene072092 | -0.822508 | 2.28E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene072424 | 0.800749 | 1.25E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene072455 | 0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene072624 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene072627 | 0.807129 | 5.88E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene072630 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene072709 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene072782 | 0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene072969 | 0.806806 | 6.88E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene073028 | 0.846132 | 2.63E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene073029 | 0.825467 | 4.61E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene073332 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene07339 | 0.853009 | 3.17E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene073564 | 0.835749 | 1.40E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene073867 | 0.800846 | 1.19E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene074369 | 0.847435 | 1.16E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene07608 | 0.852237 | 5.26E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene07719 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene08767 | 0.807036 | 6.15E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene09166 | 0.824669 | 7.12E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene09852 | 0.824312 | 8.64E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene20430 | 0.807509 | 4.88E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene20621 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene20886 | 0.847405 | 1.18E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene21172 | 0.819653 | 1.04E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene21700 | 0.808585 | 2.88E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene21926 | 0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene21928 | 0.814385 | 1.58E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene23013 | 0.833271 | 5.87E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene23491 | 0.870657 | 1.24E-66 | -1.69E-46 |
| MS.gene055603 | MS.gene24189 | 0.830584 | 2.71E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene24285 | 0.806091 | 9.73E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene25599 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene25942 | 0.846159 | 2.59E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene26426 | 0.822553 | 2.23E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene26958 | 0.807789 | 4.26E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene27041 | 0.833951 | 3.97E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene27073 | 0.854906 | 9.01E-62 | -1.69E-46 |
| MS.gene055603 | MS.gene27134 | 0.81159 | 6.49E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene27318 | 0.808625 | 2.82E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene27993 | 0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene28319 | 0.84401 | 9.85E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene28491 | 0.8137 | 2.24E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene28840 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene29719 | 0.842182 | 3.02E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene29770 | 0.813818 | 2.11E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene30663 | 0.831276 | 1.83E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene31127 | 0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene31625 | 0.811486 | 6.83E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene32193 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene32589 | 0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene33045 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene33135 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene33160 | 0.806807 | 6.87E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene33483 | 0.809111 | 2.22E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene33735 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene33935 | -0.817954 | 2.52E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene33991 | 0.81838 | 2.02E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene34495 | 0.829911 | 3.95E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene35764 | 0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene36037 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene36242 | 0.821382 | 4.16E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene36468 | 0.846582 | 1.98E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene36492 | 0.831228 | 1.88E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene36625 | 0.804994 | 1.65E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene37186 | 0.808981 | 2.37E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene37570 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene37653 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene38145 | 0.810403 | 1.17E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene39572 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene40330 | 0.817011 | 4.11E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene40918 | 0.84176 | 3.91E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene40991 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene41434 | 0.831038 | 2.09E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene41455 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene41630 | 0.820097 | 8.21E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene41681 | 0.805656 | 1.20E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene42128 | 0.829408 | 5.24E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene42247 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene42295 | 0.809299 | 2.03E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene43289 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene45051 | -0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene46355 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene46392 | 0.854559 | 1.14E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene47531 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene47822 | 0.829198 | 5.89E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene48037 | 0.806647 | 7.43E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene49288 | 0.806282 | 8.87E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene49486 | 0.805274 | 1.45E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene49772 | 0.854997 | 8.48E-62 | -1.69E-46 |
| MS.gene055603 | MS.gene49816 | 0.809099 | 2.24E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene50200 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene50636 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene50934 | 0.810729 | 9.97E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene51111 | 0.858528 | 7.75E-63 | -1.69E-46 |
| MS.gene055603 | MS.gene51221 | 0.822412 | 2.40E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene51557 | 0.851854 | 6.77E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene51920 | 0.849848 | 2.48E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene52103 | 0.809514 | 1.82E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene52281 | 0.839629 | 1.41E-57 | -1.69E-46 |
| MS.gene055603 | MS.gene52973 | 0.828602 | 8.20E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene54090 | 0.807302 | 5.40E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene54163 | 0.818658 | 1.75E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene54331 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene54734 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene54766 | 0.869247 | 3.57E-66 | -1.69E-46 |
| MS.gene055603 | MS.gene54904 | 0.812823 | 3.49E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene55063 | 0.850369 | 1.78E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene55732 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene56039 | 0.831044 | 2.09E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene56253 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene56803 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene57075 | 0.804226 | 2.39E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene57847 | 0.869672 | 2.60E-66 | -1.69E-46 |
| MS.gene055603 | MS.gene58227 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene58467 | 0.840851 | 6.78E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene58719 | 0.808949 | 2.41E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene59712 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene60120 | 0.854091 | 1.55E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene60216 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene60265 | 0.827254 | 1.73E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene60374 | 0.80114 | 1.04E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene60781 | -0.813163 | 2.94E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene61074 | 0.8248 | 6.63E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene61183 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene61257 | 0.851085 | 1.12E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene61288 | 0.834949 | 2.23E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene61682 | 0.829258 | 5.69E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene62501 | 0.81389 | 2.04E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene62899 | 0.814352 | 1.61E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene62943 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene63988 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene64191 | 0.833667 | 4.68E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene64665 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene65046 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene65650 | 0.827005 | 1.99E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene65789 | 0.829936 | 3.89E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene66341 | 0.835083 | 2.06E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene66476 | 0.819966 | 8.80E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene66477 | 0.808904 | 2.46E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene67107 | 0.812461 | 4.19E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene67179 | 0.813941 | 1.98E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene67485 | 0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene68119 | 0.844664 | 6.57E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene68264 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene68888 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene69442 | 0.817345 | 3.46E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene69611 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene69821 | 0.851971 | 6.27E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene70112 | 0.852396 | 4.74E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene70282 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene70317 | 0.836719 | 7.94E-57 | -1.69E-46 |
| MS.gene055603 | MS.gene70613 | 0.851094 | 1.11E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene71547 | 0.847278 | 1.28E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene71825 | 0.812822 | 3.49E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene71879 | 0.829012 | 6.53E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene71988 | 0.821851 | 3.24E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene72376 | 0.852622 | 4.09E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene72621 | 0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene72894 | 0.843755 | 1.15E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene73643 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene73825 | 0.824751 | 6.81E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene73870 | 0.829991 | 3.78E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene74237 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene74260 | 0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene74537 | 0.808217 | 3.45E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene74900 | 0.847205 | 1.34E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene74938 | 0.832407 | 9.62E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene74956 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene75060 | 0.84618 | 2.55E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene75062 | 0.848934 | 4.47E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene75185 | 0.829728 | 4.38E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene75187 | 0.805004 | 1.65E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene75412 | 0.824496 | 7.82E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene75413 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene75605 | 0.834253 | 3.33E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene75625 | 0.804583 | 2.02E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene75781 | 0.871505 | 6.49E-67 | -1.69E-46 |
| MS.gene055603 | MS.gene76248 | 0.853057 | 3.07E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene76440 | 0.817606 | 3.02E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene76635 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene76645 | 0.806603 | 7.59E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene77649 | 0.808317 | 3.29E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene77759 | 0.848715 | 5.14E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene78314 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene79200 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene79280 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene79466 | 0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene79599 | -0.8109 | 9.16E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene79605 | 0.812121 | 4.97E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene81703 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene81831 | 0.824107 | 9.66E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene82408 | 0.814069 | 1.86E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene82600 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene82767 | 0.83901 | 2.05E-57 | -1.69E-46 |
| MS.gene055603 | MS.gene82956 | 0.803141 | 4.02E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene83091 | 0.804375 | 2.23E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene83217 | 0.821819 | 3.30E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene85246 | 0.850469 | 1.66E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene85519 | 0.807771 | 4.30E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene86315 | 0.845834 | 3.17E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene86392 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene87403 | 0.801984 | 6.96E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene87673 | 0.806776 | 6.98E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene87924 | 0.808155 | 3.56E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene87972 | 0.817722 | 2.85E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene88495 | 0.829324 | 5.49E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene88831 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene89027 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene89060 | 0.825228 | 5.26E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene89712 | 0.86475 | 9.71E-65 | -1.69E-46 |
| MS.gene055603 | MS.gene89721 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene90097 | 0.813714 | 2.23E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene90119 | 0.824388 | 8.29E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene90413 | 0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene90882 | 0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene90948 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene91204 | 0.812371 | 4.38E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene92135 | 0.821598 | 3.71E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene92186 | 0.834721 | 2.54E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene92557 | 0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene92775 | 0.828301 | 9.70E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene92818 | 0.808572 | 2.90E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene92819 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene92945 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene93155 | 0.832417 | 9.56E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene93288 | -0.800993 | 1.11E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene93985 | 0.825978 | 3.49E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene94183 | 0.841475 | 4.64E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene95305 | 0.852932 | 3.34E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene95469 | 0.841617 | 4.26E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene96693 | 0.820569 | 6.40E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene97008 | 0.840413 | 8.83E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene97411 | 0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene97738 | 0.80206 | 6.71E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene98436 | 0.84521 | 4.68E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene98635 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene98848 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene055603 | MS.gene98889 | 0.858487 | 7.96E-63 | -1.69E-46 |
| MS.gene055603 | MS.gene99533 | 0.811138 | 8.13E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055603.t1 | MTR_4g065050 | 71.034 | 145 | 42 | 0 | 26 | 170 | 10 | 154 | 6.93e-69 | 206 |
| MS.gene055603.t1 | MTR_4g065050 | 67.797 | 118 | 38 | 0 | 39 | 156 | 1 | 118 | 1.05e-52 | 164 |
| MS.gene055603.t1 | MTR_8g089030 | 52.747 | 91 | 39 | 3 | 17 | 104 | 36 | 125 | 1.30e-17 | 79.7 |
| MS.gene055603.t1 | MTR_8g089030 | 48.101 | 79 | 39 | 2 | 28 | 104 | 470 | 548 | 5.40e-11 | 60.5 |
| MS.gene055603.t1 | MTR_8g089030 | 52.747 | 91 | 39 | 3 | 17 | 104 | 36 | 125 | 1.53e-17 | 79.3 |
| MS.gene055603.t1 | MTR_8g089030 | 48.101 | 79 | 39 | 2 | 28 | 104 | 470 | 548 | 6.18e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 23 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGGTCCATTATGTAAAA+TGG | 0.330791 | 4.3:+38906632 | MS.gene055603:CDS |
| GGAAGAGGATATGTCTCTTC+AGG | 0.339040 | 4.3:+38906494 | MS.gene055603:CDS |
| GAACAACCGGAGCATCTTGC+AGG | 0.385771 | 4.3:+38906615 | MS.gene055603:CDS |
| TGCATTAATTGCGGAACAAC+CGG | 0.397610 | 4.3:+38906602 | MS.gene055603:CDS |
| GAAGAAACGGATCATATTCC+AGG | 0.409810 | 4.3:+38906723 | MS.gene055603:CDS |
| TGAATTGATTGCAGCCGAAT+TGG | 0.427925 | 4.3:+38906473 | MS.gene055603:CDS |
| TCTTCAGGATTCATTGAGAA+AGG | 0.440370 | 4.3:+38906509 | MS.gene055603:CDS |
| AGACATATCCTCTTCCAATT+CGG | 0.468675 | 4.3:-38906487 | None:intergenic |
| TGAATTTATTGAGGAAGAAA+CGG | 0.471592 | 4.3:+38906710 | MS.gene055603:CDS |
| CAATATTGATGAATTTATTG+AGG | 0.493374 | 4.3:+38906701 | MS.gene055603:CDS |
| TTCCGAGAAGTCCATGGAAA+AGG | 0.505472 | 4.3:+38906231 | MS.gene055603:CDS |
| AGAAGAGAATAATAAGCAAC+CGG | 0.507208 | 4.3:+38906364 | MS.gene055603:CDS |
| AATGGACCTGCAAGATGCTC+CGG | 0.528367 | 4.3:-38906621 | None:intergenic |
| ATTTGTCAATGAATTGTACA+TGG | 0.532546 | 4.3:+38906791 | MS.gene055603:CDS |
| GATTGCAGCCGAATTGGAAG+AGG | 0.533785 | 4.3:+38906479 | MS.gene055603:CDS |
| CAACATTTCCGAGAAGTCCA+TGG | 0.547363 | 4.3:+38906225 | MS.gene055603:CDS |
| GTCAATGAATTGTACATGGA+TGG | 0.549535 | 4.3:+38906795 | MS.gene055603:CDS |
| AAGGTATGCTGCTTTGTATG+TGG | 0.584948 | 4.3:+38906824 | MS.gene055603:CDS |
| TGTACATGGATGGACAAGAA+AGG | 0.594997 | 4.3:+38906805 | MS.gene055603:CDS |
| GTACATGAAAGCGAGAAAAG+AGG | 0.599519 | 4.3:+38906665 | MS.gene055603:CDS |
| GGAGATGGATGCATTAATTG+CGG | 0.639286 | 4.3:+38906593 | MS.gene055603:CDS |
| TTGTATGTGGAGAAGTCTAG+TGG | 0.643539 | 4.3:+38906837 | MS.gene055603:CDS |
| TGTATGTGGAGAAGTCTAGT+GGG | 0.662396 | 4.3:+38906838 | MS.gene055603:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTGTAAGAAGTTAAA+AGG | - | chr4.3:38906907-38906926 | None:intergenic | 20.0% |
| !! | AAAACTGTAAGAAGTTAAAA+GGG | - | chr4.3:38906906-38906925 | None:intergenic | 20.0% |
| !! | CAATATTGATGAATTTATTG+AGG | + | chr4.3:38906701-38906720 | MS.gene055603:CDS | 20.0% |
| !!! | AAACATTTTTTTTCAAAAGC+AGG | - | chr4.3:38906305-38906324 | None:intergenic | 20.0% |
| ! | AAAAAAAATGTTTCTTGCTG+TGG | + | chr4.3:38906312-38906331 | MS.gene055603:intron | 25.0% |
| ! | ATTTGTCAATGAATTGTACA+TGG | + | chr4.3:38906791-38906810 | MS.gene055603:CDS | 25.0% |
| ! | TGAATTTATTGAGGAAGAAA+CGG | + | chr4.3:38906710-38906729 | MS.gene055603:CDS | 25.0% |
| !! | AAAAAAATGTTTCTTGCTGT+GGG | + | chr4.3:38906313-38906332 | MS.gene055603:intron | 25.0% |
| !! | TTAGTGACCATTTTACATAA+TGG | - | chr4.3:38906642-38906661 | None:intergenic | 25.0% |
| AACTTGAATTTGGCTGTAAA+TGG | + | chr4.3:38906389-38906408 | MS.gene055603:intron | 30.0% | |
| AGAAGAGAATAATAAGCAAC+CGG | + | chr4.3:38906364-38906383 | MS.gene055603:CDS | 30.0% | |
| ! | ACAGTTTTTCTTGTCACTAT+AGG | + | chr4.3:38906918-38906937 | MS.gene055603:intron | 30.0% |
| !! | TACTATTTTGAAAGAGGAGA+TGG | + | chr4.3:38906578-38906597 | MS.gene055603:CDS | 30.0% |
| !! | TTACGCTACTATTTTGAAAG+AGG | + | chr4.3:38906572-38906591 | MS.gene055603:CDS | 30.0% |
| AAAAACCCTAAAAGAGAACG+AGG | + | chr4.3:38906548-38906567 | MS.gene055603:CDS | 35.0% | |
| AGACATATCCTCTTCCAATT+CGG | - | chr4.3:38906490-38906509 | None:intergenic | 35.0% | |
| GAATTTGGCTGTAAATGGAT+GGG | + | chr4.3:38906394-38906413 | MS.gene055603:intron | 35.0% | |
| GTCAATGAATTGTACATGGA+TGG | + | chr4.3:38906795-38906814 | MS.gene055603:CDS | 35.0% | |
| TCTTCAGGATTCATTGAGAA+AGG | + | chr4.3:38906509-38906528 | MS.gene055603:CDS | 35.0% | |
| TGAATTTGGCTGTAAATGGA+TGG | + | chr4.3:38906393-38906412 | MS.gene055603:intron | 35.0% | |
| TGCAGGTCCATTATGTAAAA+TGG | + | chr4.3:38906632-38906651 | MS.gene055603:CDS | 35.0% | |
| TGCTTACTAGAAACTGTTTG+TGG | + | chr4.3:38906436-38906455 | MS.gene055603:intron | 35.0% | |
| ! | ACAGCCAAATTCAAGTTTAC+CGG | - | chr4.3:38906386-38906405 | None:intergenic | 35.0% |
| ! | ATCTCTATTTTCAATGCACC+TGG | - | chr4.3:38906744-38906763 | None:intergenic | 35.0% |
| ! | GTAAACCTCGTTCTCTTTTA+GGG | - | chr4.3:38906556-38906575 | None:intergenic | 35.0% |
| GAAGAAACGGATCATATTCC+AGG | + | chr4.3:38906723-38906742 | MS.gene055603:CDS | 40.0% | |
| GCAACCGGTAAACTTGAATT+TGG | + | chr4.3:38906379-38906398 | MS.gene055603:intron | 40.0% | |
| GGAGATGGATGCATTAATTG+CGG | + | chr4.3:38906593-38906612 | MS.gene055603:CDS | 40.0% | |
| GTACATGAAAGCGAGAAAAG+AGG | + | chr4.3:38906665-38906684 | MS.gene055603:CDS | 40.0% | |
| TGAATTGATTGCAGCCGAAT+TGG | + | chr4.3:38906473-38906492 | MS.gene055603:CDS | 40.0% | |
| TGCATTAATTGCGGAACAAC+CGG | + | chr4.3:38906602-38906621 | MS.gene055603:CDS | 40.0% | |
| TGTACATGGATGGACAAGAA+AGG | + | chr4.3:38906805-38906824 | MS.gene055603:CDS | 40.0% | |
| TGTATGTGGAGAAGTCTAGT+GGG | + | chr4.3:38906838-38906857 | MS.gene055603:CDS | 40.0% | |
| TTGTATGTGGAGAAGTCTAG+TGG | + | chr4.3:38906837-38906856 | MS.gene055603:CDS | 40.0% | |
| ! | CGTAAACCTCGTTCTCTTTT+AGG | - | chr4.3:38906557-38906576 | None:intergenic | 40.0% |
| ! | CTAGTGGGTAAGTTATACAC+TGG | + | chr4.3:38906853-38906872 | MS.gene055603:intron | 40.0% |
| !! | AAGGTATGCTGCTTTGTATG+TGG | + | chr4.3:38906824-38906843 | MS.gene055603:CDS | 40.0% |
| CAACATTTCCGAGAAGTCCA+TGG | + | chr4.3:38906225-38906244 | MS.gene055603:CDS | 45.0% | |
| GGAAGAGGATATGTCTCTTC+AGG | + | chr4.3:38906494-38906513 | MS.gene055603:CDS | 45.0% | |
| TTCCGAGAAGTCCATGGAAA+AGG | + | chr4.3:38906231-38906250 | MS.gene055603:CDS | 45.0% | |
| ! | CACCTTTTCCATGGACTTCT+CGG | - | chr4.3:38906236-38906255 | None:intergenic | 45.0% |
| ! | TGTATGTCGCACCTTTTCCA+TGG | - | chr4.3:38906245-38906264 | None:intergenic | 45.0% |
| AATGGACCTGCAAGATGCTC+CGG | - | chr4.3:38906624-38906643 | None:intergenic | 50.0% | |
| GATTGCAGCCGAATTGGAAG+AGG | + | chr4.3:38906479-38906498 | MS.gene055603:CDS | 50.0% | |
| ! | CTTGCTGTGGGCAAAACTGA+AGG | + | chr4.3:38906325-38906344 | MS.gene055603:intron | 50.0% |
| ! | GAACAACCGGAGCATCTTGC+AGG | + | chr4.3:38906615-38906634 | MS.gene055603:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 38906217 | 38906982 | 38906217 | ID=MS.gene055603 |
| chr4.3 | mRNA | 38906217 | 38906982 | 38906217 | ID=MS.gene055603.t1;Parent=MS.gene055603 |
| chr4.3 | exon | 38906217 | 38906252 | 38906217 | ID=MS.gene055603.t1.exon1;Parent=MS.gene055603.t1 |
| chr4.3 | CDS | 38906217 | 38906252 | 38906217 | ID=cds.MS.gene055603.t1;Parent=MS.gene055603.t1 |
| chr4.3 | exon | 38906347 | 38906385 | 38906347 | ID=MS.gene055603.t1.exon2;Parent=MS.gene055603.t1 |
| chr4.3 | CDS | 38906347 | 38906385 | 38906347 | ID=cds.MS.gene055603.t1;Parent=MS.gene055603.t1 |
| chr4.3 | exon | 38906465 | 38906859 | 38906465 | ID=MS.gene055603.t1.exon3;Parent=MS.gene055603.t1 |
| chr4.3 | CDS | 38906465 | 38906859 | 38906465 | ID=cds.MS.gene055603.t1;Parent=MS.gene055603.t1 |
| chr4.3 | exon | 38906940 | 38906982 | 38906940 | ID=MS.gene055603.t1.exon4;Parent=MS.gene055603.t1 |
| chr4.3 | CDS | 38906940 | 38906982 | 38906940 | ID=cds.MS.gene055603.t1;Parent=MS.gene055603.t1 |
| Gene Sequence |
| Protein sequence |
