Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54974.t1 | XP_003624458.1 | 93.8 | 402 | 13 | 2 | 1 | 402 | 1 | 390 | 1.50E-192 | 682.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54974.t1 | O22800 | 31.2 | 430 | 219 | 11 | 5 | 397 | 12 | 401 | 6.9e-21 | 103.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54974.t1 | G7KW76 | 93.8 | 402 | 13 | 2 | 1 | 402 | 1 | 390 | 1.1e-192 | 682.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene54974.t1 | TF | C2C2-CO-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050702 | MS.gene54974 | -0.85281 | 3.62E-61 | -1.69E-46 |
| MS.gene053401 | MS.gene54974 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene056338 | MS.gene54974 | 0.804545 | 2.05E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72598 | MS.gene54974 | PPI |
| MS.gene024245 | MS.gene54974 | PPI |
| MS.gene033677 | MS.gene54974 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54974.t1 | MTR_7g083540 | 93.781 | 402 | 13 | 2 | 1 | 402 | 1 | 390 | 0.0 | 773 |
| MS.gene54974.t1 | MTR_7g108150 | 47.445 | 137 | 54 | 4 | 4 | 129 | 19 | 148 | 1.53e-30 | 120 |
| MS.gene54974.t1 | MTR_7g108150 | 55.556 | 63 | 26 | 1 | 334 | 394 | 307 | 369 | 1.11e-13 | 72.4 |
| MS.gene54974.t1 | MTR_5g069480 | 43.396 | 106 | 54 | 2 | 5 | 110 | 5 | 104 | 1.13e-23 | 100 |
| MS.gene54974.t1 | MTR_5g069480 | 42.727 | 110 | 57 | 2 | 1 | 110 | 1 | 104 | 1.75e-23 | 101 |
| MS.gene54974.t1 | MTR_3g082630 | 39.568 | 139 | 76 | 3 | 1 | 138 | 1 | 132 | 4.30e-23 | 100 |
| MS.gene54974.t1 | MTR_3g082630 | 54.412 | 68 | 31 | 0 | 330 | 397 | 331 | 398 | 1.63e-14 | 75.1 |
| MS.gene54974.t1 | MTR_2g088900 | 43.119 | 109 | 52 | 2 | 1 | 108 | 97 | 196 | 3.25e-19 | 89.7 |
| MS.gene54974.t1 | MTR_2g088900 | 73.333 | 45 | 12 | 0 | 353 | 397 | 466 | 510 | 4.01e-13 | 71.2 |
| MS.gene54974.t1 | MTR_1g109350 | 34.188 | 117 | 68 | 2 | 1 | 117 | 1 | 108 | 3.79e-17 | 82.4 |
| MS.gene54974.t1 | MTR_1g013450 | 37.113 | 97 | 55 | 1 | 5 | 95 | 6 | 102 | 6.05e-15 | 75.5 |
| MS.gene54974.t1 | MTR_3g105710 | 42.667 | 75 | 43 | 0 | 5 | 79 | 6 | 80 | 3.45e-13 | 70.1 |
| MS.gene54974.t1 | MTR_4g128930 | 37.634 | 93 | 52 | 2 | 5 | 97 | 22 | 108 | 6.52e-12 | 67.0 |
| MS.gene54974.t1 | MTR_4g128930 | 36.559 | 93 | 54 | 1 | 305 | 397 | 255 | 342 | 1.16e-11 | 66.2 |
| MS.gene54974.t1 | MTR_7g018170 | 32.990 | 97 | 59 | 2 | 5 | 101 | 26 | 116 | 7.91e-11 | 63.5 |
| MS.gene54974.t1 | MTR_7g018170 | 68.293 | 41 | 13 | 0 | 357 | 397 | 331 | 371 | 8.89e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54974.t1 | AT2G33500 | 34.411 | 433 | 200 | 12 | 5 | 397 | 12 | 400 | 2.73e-61 | 203 |
| MS.gene54974.t1 | AT2G33500 | 33.945 | 436 | 199 | 12 | 5 | 397 | 12 | 401 | 8.82e-61 | 202 |
| MS.gene54974.t1 | AT1G28050 | 53.509 | 114 | 47 | 1 | 4 | 117 | 8 | 115 | 1.93e-36 | 138 |
| MS.gene54974.t1 | AT1G28050 | 39.548 | 177 | 83 | 5 | 235 | 397 | 263 | 429 | 6.53e-21 | 94.4 |
| MS.gene54974.t1 | AT2G47890 | 48.361 | 122 | 55 | 2 | 5 | 126 | 13 | 126 | 1.29e-28 | 114 |
| MS.gene54974.t1 | AT2G47890 | 48.361 | 122 | 55 | 2 | 5 | 126 | 13 | 126 | 1.41e-28 | 112 |
| MS.gene54974.t1 | AT2G47890 | 48.361 | 122 | 55 | 2 | 5 | 126 | 13 | 126 | 1.63e-28 | 114 |
| MS.gene54974.t1 | AT2G47890 | 68.889 | 45 | 14 | 0 | 353 | 397 | 287 | 331 | 1.93e-13 | 71.2 |
| MS.gene54974.t1 | AT5G48250 | 41.322 | 121 | 67 | 1 | 1 | 121 | 1 | 117 | 3.08e-25 | 106 |
| MS.gene54974.t1 | AT5G48250 | 61.224 | 49 | 19 | 0 | 349 | 397 | 312 | 360 | 6.28e-13 | 70.1 |
| MS.gene54974.t1 | AT3G07650 | 39.669 | 121 | 68 | 2 | 1 | 116 | 1 | 121 | 3.60e-22 | 97.4 |
| MS.gene54974.t1 | AT3G07650 | 65.306 | 49 | 17 | 0 | 349 | 397 | 311 | 359 | 2.78e-14 | 74.3 |
| MS.gene54974.t1 | AT3G07650 | 39.669 | 121 | 68 | 2 | 1 | 116 | 1 | 121 | 3.60e-22 | 97.4 |
| MS.gene54974.t1 | AT3G07650 | 65.306 | 49 | 17 | 0 | 349 | 397 | 311 | 359 | 2.78e-14 | 74.3 |
| MS.gene54974.t1 | AT3G07650 | 39.669 | 121 | 68 | 2 | 1 | 116 | 1 | 121 | 3.60e-22 | 97.4 |
| MS.gene54974.t1 | AT3G07650 | 65.306 | 49 | 17 | 0 | 349 | 397 | 311 | 359 | 2.78e-14 | 74.3 |
| MS.gene54974.t1 | AT3G07650 | 39.669 | 121 | 68 | 2 | 1 | 116 | 1 | 121 | 3.60e-22 | 97.4 |
| MS.gene54974.t1 | AT3G07650 | 65.306 | 49 | 17 | 0 | 349 | 397 | 311 | 359 | 2.78e-14 | 74.3 |
| MS.gene54974.t1 | AT1G68190 | 35.135 | 148 | 86 | 3 | 5 | 150 | 43 | 182 | 1.43e-21 | 95.9 |
| MS.gene54974.t1 | AT1G68190 | 35.135 | 148 | 86 | 3 | 5 | 150 | 14 | 153 | 1.50e-21 | 95.5 |
| MS.gene54974.t1 | AT1G68190 | 35.135 | 148 | 86 | 3 | 5 | 150 | 14 | 153 | 1.50e-21 | 95.5 |
| MS.gene54974.t1 | AT3G21880 | 36.800 | 125 | 71 | 1 | 5 | 129 | 9 | 125 | 3.99e-20 | 91.7 |
| MS.gene54974.t1 | AT3G21880 | 75.556 | 45 | 11 | 0 | 353 | 397 | 311 | 355 | 2.05e-13 | 71.6 |
| MS.gene54974.t1 | AT3G21880 | 36.800 | 125 | 71 | 1 | 5 | 129 | 9 | 125 | 3.99e-20 | 91.7 |
| MS.gene54974.t1 | AT3G21880 | 75.556 | 45 | 11 | 0 | 353 | 397 | 311 | 355 | 2.05e-13 | 71.6 |
| MS.gene54974.t1 | AT3G21880 | 36.800 | 125 | 71 | 1 | 5 | 129 | 5 | 121 | 4.42e-20 | 91.3 |
| MS.gene54974.t1 | AT3G21880 | 75.556 | 45 | 11 | 0 | 353 | 397 | 307 | 351 | 2.02e-13 | 71.6 |
| MS.gene54974.t1 | AT4G15250 | 33.858 | 127 | 76 | 1 | 1 | 127 | 1 | 119 | 1.22e-18 | 86.7 |
| MS.gene54974.t1 | AT5G24930 | 44.444 | 72 | 40 | 0 | 5 | 76 | 6 | 77 | 3.14e-14 | 73.9 |
| MS.gene54974.t1 | AT5G15840 | 38.158 | 76 | 47 | 0 | 4 | 79 | 19 | 94 | 1.32e-12 | 68.9 |
| MS.gene54974.t1 | AT5G15840 | 38.158 | 76 | 47 | 0 | 4 | 79 | 19 | 94 | 3.45e-12 | 67.0 |
| MS.gene54974.t1 | AT3G02380 | 37.333 | 75 | 47 | 0 | 5 | 79 | 16 | 90 | 1.09e-11 | 66.2 |
| MS.gene54974.t1 | AT5G15850 | 38.667 | 75 | 46 | 0 | 5 | 79 | 12 | 86 | 1.62e-11 | 65.5 |
| MS.gene54974.t1 | AT2G24790 | 38.272 | 81 | 47 | 1 | 5 | 85 | 8 | 85 | 4.90e-11 | 63.5 |
| MS.gene54974.t1 | AT2G24790 | 38.272 | 81 | 47 | 1 | 5 | 85 | 8 | 85 | 7.09e-11 | 62.0 |
Find 92 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACATCTTGCAATGATTT+TGG | 0.117879 | 7.2:-23828073 | None:intergenic |
| TGCGAAGAGGAAGAGGAATT+TGG | 0.187240 | 7.2:+23826294 | MS.gene54974:CDS |
| TGTTATGGATTCAATCAATT+TGG | 0.190330 | 7.2:-23829107 | None:intergenic |
| ATGAATCTGGTCTTCTTCTT+TGG | 0.202244 | 7.2:+23826464 | MS.gene54974:CDS |
| AAGAGAAATAGTAATGATTA+TGG | 0.284505 | 7.2:+23826439 | MS.gene54974:CDS |
| TGAATCTGGTCTTCTTCTTT+GGG | 0.293542 | 7.2:+23826465 | MS.gene54974:CDS |
| AGTTTCCCTTCCTCTCTATC+TGG | 0.308818 | 7.2:+23827532 | MS.gene54974:CDS |
| CACGAGATCGTTTCTACTTT+GGG | 0.309004 | 7.2:+23826166 | MS.gene54974:CDS |
| ATTTGAAGGTCCGGTGGTTC+CGG | 0.352451 | 7.2:+23826228 | MS.gene54974:CDS |
| CTCAAAAGATGTTCCATAAC+TGG | 0.354580 | 7.2:-23829151 | None:intergenic |
| TTCAAATTCCGCTACGAAAA+CGG | 0.368362 | 7.2:-23826212 | None:intergenic |
| CTTCTATACGGCGGCGGTTG+TGG | 0.371891 | 7.2:-23826120 | None:intergenic |
| GCAAAATTTGCAGAATCAAT+CGG | 0.389145 | 7.2:+23829009 | MS.gene54974:intron |
| GTGCTCTTCCAAGCCAATCT+TGG | 0.393330 | 7.2:-23829203 | None:intergenic |
| CGCCGACAGTGTACCAGTTA+TGG | 0.397943 | 7.2:+23829138 | MS.gene54974:CDS |
| AAACAGAGTTTCGCGGAGTC+TGG | 0.399009 | 7.2:-23825905 | None:intergenic |
| AATGATTATGGAAATGAATC+TGG | 0.399310 | 7.2:+23826451 | MS.gene54974:CDS |
| AATATGAATTGCTCAACATT+TGG | 0.400714 | 7.2:+23828097 | MS.gene54974:CDS |
| AGCAACATAAATGCCAAGAT+TGG | 0.407616 | 7.2:+23829190 | MS.gene54974:CDS |
| AGTGAGAGGGCGATTTGTTA+AGG | 0.417847 | 7.2:+23829553 | MS.gene54974:CDS |
| TACGGCGGCGGTTGTGGTGG+TGG | 0.418409 | 7.2:-23826114 | None:intergenic |
| TGGTTCCGGTTGTGAAGAAT+AGG | 0.424178 | 7.2:+23826242 | MS.gene54974:CDS |
| TCACGAGATCGTTTCTACTT+TGG | 0.428133 | 7.2:+23826165 | MS.gene54974:CDS |
| CTCGTGAACGGAAGGACAAC+CGG | 0.438426 | 7.2:-23826149 | None:intergenic |
| CACAACCGCCGCCGTATAGA+AGG | 0.439408 | 7.2:+23826121 | MS.gene54974:CDS |
| GCTACGAAAACGGAGTCATT+CGG | 0.440696 | 7.2:-23826202 | None:intergenic |
| TAGGGATGAGGTGTATGAAC+AGG | 0.447620 | 7.2:+23826261 | MS.gene54974:CDS |
| GTCGGCGCCACTGTATGTTA+TGG | 0.448248 | 7.2:-23829122 | None:intergenic |
| TTCAATGTCACCGCTGCGAT+TGG | 0.452188 | 7.2:+23826047 | MS.gene54974:CDS |
| CGTAGCGGAATTTGAAGGTC+CGG | 0.462252 | 7.2:+23826219 | MS.gene54974:CDS |
| TGGAAGTTGCGAAGAGGAAG+AGG | 0.466657 | 7.2:+23826287 | MS.gene54974:CDS |
| AACCGGTGAGACCTTCTATA+CGG | 0.471948 | 7.2:-23826132 | None:intergenic |
| CTTGAGTGCGAGTGCGTTTG+CGG | 0.474133 | 7.2:-23825951 | None:intergenic |
| TCATCCCTATTCTTCACAAC+CGG | 0.475665 | 7.2:-23826247 | None:intergenic |
| GAAGAGCACACAAGGAATAG+AGG | 0.476262 | 7.2:+23829217 | MS.gene54974:CDS |
| CGCAGCGGTGACATTGAACT+AGG | 0.479363 | 7.2:-23826042 | None:intergenic |
| CTTCTCCTTGTACCGTAACA+TGG | 0.495549 | 7.2:-23829245 | None:intergenic |
| GGATGCCATGTTACGGTACA+AGG | 0.500503 | 7.2:+23829240 | MS.gene54974:CDS |
| AAATTAAGCAAAGAAGTAAA+CGG | 0.500811 | 7.2:-23826391 | None:intergenic |
| TTCTTCACAACCGGAACCAC+CGG | 0.501470 | 7.2:-23826238 | None:intergenic |
| TGAGGTGTATGAACAGGTGG+TGG | 0.504109 | 7.2:+23826267 | MS.gene54974:CDS |
| AGCAACAAGAAAACTAGAGA+TGG | 0.509293 | 7.2:+23829070 | MS.gene54974:CDS |
| TCAAGAGATATGACATATGA+TGG | 0.511657 | 7.2:+23828025 | MS.gene54974:CDS |
| AGCACATTCGCTATGAATCA+AGG | 0.520514 | 7.2:+23829504 | MS.gene54974:CDS |
| CAAGTACCAGATAGAGAGGA+AGG | 0.523485 | 7.2:-23827538 | None:intergenic |
| GAAGAGGAAGAGGAATTTGG+AGG | 0.524479 | 7.2:+23826297 | MS.gene54974:CDS |
| TTTCTACTTTCTTCTTCACA+TGG | 0.524678 | 7.2:-23829048 | None:intergenic |
| GGTTCCGGTTGTGAAGAATA+GGG | 0.535707 | 7.2:+23826243 | MS.gene54974:CDS |
| CATAAATGCCAAGATTGGCT+TGG | 0.540383 | 7.2:+23829195 | MS.gene54974:CDS |
| CTATACGGCGGCGGTTGTGG+TGG | 0.541136 | 7.2:-23826117 | None:intergenic |
| GCTATGAATCAAGGAAGGCT+AGG | 0.543852 | 7.2:+23829513 | MS.gene54974:CDS |
| ATAGAGGGGATGCCATGTTA+CGG | 0.554868 | 7.2:+23829233 | MS.gene54974:CDS |
| GAAGGGAAACTAGCAAAGAA+TGG | 0.558031 | 7.2:-23827520 | None:intergenic |
| TGGTGGAAAGATGAAGAGGT+GGG | 0.564898 | 7.2:-23826097 | None:intergenic |
| GAAACGATCTCGTGAACGGA+AGG | 0.565871 | 7.2:-23826157 | None:intergenic |
| GAAACTAGCAAAGAATGGTA+AGG | 0.573396 | 7.2:-23827515 | None:intergenic |
| GATACGAGAAAGAGAGTGAG+AGG | 0.573604 | 7.2:+23829539 | MS.gene54974:CDS |
| CTATGAATCAAGGAAGGCTA+GGG | 0.574333 | 7.2:+23829514 | MS.gene54974:CDS |
| AAGAGCACACAAGGAATAGA+GGG | 0.577298 | 7.2:+23829218 | MS.gene54974:CDS |
| GCAACAAGAAAACTAGAGAT+GGG | 0.580033 | 7.2:+23829071 | MS.gene54974:CDS |
| GCAACTGATGATATTCAAGA+AGG | 0.580530 | 7.2:+23829575 | MS.gene54974:CDS |
| AGTAGAAACGATCTCGTGAA+CGG | 0.584234 | 7.2:-23826161 | None:intergenic |
| CGTTTGCGGAGTGCACGTGC+TGG | 0.587965 | 7.2:-23825937 | None:intergenic |
| TTGGCTTGGAAGAGCACACA+AGG | 0.593037 | 7.2:+23829209 | MS.gene54974:CDS |
| GGATGAGGTGTATGAACAGG+TGG | 0.594648 | 7.2:+23826264 | MS.gene54974:CDS |
| GTGGTGGAAAGATGAAGAGG+TGG | 0.596821 | 7.2:-23826098 | None:intergenic |
| TTCCATAACTGGTACACTGT+CGG | 0.600741 | 7.2:-23829140 | None:intergenic |
| AACGCAAGTACCAGATAGAG+AGG | 0.606177 | 7.2:-23827542 | None:intergenic |
| GTGGTGGTGGAAAGATGAAG+AGG | 0.606309 | 7.2:-23826101 | None:intergenic |
| GGTTGTGAAGAATAGGGATG+AGG | 0.611431 | 7.2:+23826249 | MS.gene54974:CDS |
| AGCGGAATTTGAAGGTCCGG+TGG | 0.616808 | 7.2:+23826222 | MS.gene54974:CDS |
| CGCCGTATAGAAGGTCTCAC+CGG | 0.625403 | 7.2:+23826130 | MS.gene54974:CDS |
| CTTGTGTCGCAATAGTCACA+CGG | 0.626589 | 7.2:-23825860 | None:intergenic |
| TGAGACCTTCTATACGGCGG+CGG | 0.629918 | 7.2:-23826126 | None:intergenic |
| CGCTGCGATTGGAACTCTCA+CGG | 0.637906 | 7.2:+23826058 | MS.gene54974:CDS |
| ATTGAATCCATAACATACAG+TGG | 0.640281 | 7.2:+23829115 | MS.gene54974:CDS |
| GCAAACTAAACAGAGTTTCG+CGG | 0.640738 | 7.2:-23825912 | None:intergenic |
| CATTCGCTATGAATCAAGGA+AGG | 0.651760 | 7.2:+23829508 | MS.gene54974:CDS |
| AGATATGACATATGATGGTG+TGG | 0.652581 | 7.2:+23828030 | MS.gene54974:CDS |
| AAGTACCAGATAGAGAGGAA+GGG | 0.656940 | 7.2:-23827537 | None:intergenic |
| GGTGAAGCAACGAACTGAAG+CGG | 0.659811 | 7.2:-23826014 | None:intergenic |
| ATACGAGAAAGAGAGTGAGA+GGG | 0.660678 | 7.2:+23829540 | MS.gene54974:CDS |
| GGTGGAAAGATGAAGAGGTG+GGG | 0.660716 | 7.2:-23826096 | None:intergenic |
| AGAATGGTAAGGAGGTGCAA+TGG | 0.667748 | 7.2:-23827504 | None:intergenic |
| AGGTGGTGGAAGTTGCGAAG+AGG | 0.669173 | 7.2:+23826281 | MS.gene54974:CDS |
| ACTAGCAAAGAATGGTAAGG+AGG | 0.679047 | 7.2:-23827512 | None:intergenic |
| AGGAGAAGAAGAAAACTCGA+AGG | 0.686541 | 7.2:+23829260 | MS.gene54974:CDS |
| AGAGCACACAAGGAATAGAG+GGG | 0.718530 | 7.2:+23829219 | MS.gene54974:CDS |
| CGGTGAGACCTTCTATACGG+CGG | 0.729242 | 7.2:-23826129 | None:intergenic |
| CGTGAGAGTTCCAATCGCAG+CGG | 0.733388 | 7.2:-23826057 | None:intergenic |
| CTATTGCGACACAAGAAACG+CGG | 0.741192 | 7.2:+23825868 | MS.gene54974:CDS |
| TGCGATTGGAACTCTCACGG+CGG | 0.780073 | 7.2:+23826061 | MS.gene54974:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAACATTTTTTTTG+AGG | - | chr7.2:23826651-23826670 | None:intergenic | 10.0% |
| !!! | AAAAAAAACATTTTTTTTGA+GGG | - | chr7.2:23826650-23826669 | None:intergenic | 10.0% |
| !!! | TATTTTTTATTTTTTGTAGT+TGG | - | chr7.2:23829385-23829404 | None:intergenic | 10.0% |
| !!! | TTAAGATTGTTAATTTTAAT+TGG | + | chr7.2:23827581-23827600 | MS.gene54974:intron | 10.0% |
| !!! | ACTTTTTCTACATTATAAAT+TGG | - | chr7.2:23828184-23828203 | None:intergenic | 15.0% |
| !!! | ATAATAGTAGTTTTTTTTAG+AGG | + | chr7.2:23826674-23826693 | MS.gene54974:intron | 15.0% |
| !!! | CATTAATTCAACTTTTAATA+TGG | + | chr7.2:23828289-23828308 | MS.gene54974:intron | 15.0% |
| !!! | GAAAAAATAATCTCAAATTT+TGG | + | chr7.2:23828230-23828249 | MS.gene54974:intron | 15.0% |
| !!! | GTTAATTTTAATTGGTTAAA+GGG | + | chr7.2:23827589-23827608 | MS.gene54974:intron | 15.0% |
| !!! | TGTATTATTATTTTCAACTT+GGG | - | chr7.2:23829424-23829443 | None:intergenic | 15.0% |
| !!! | TGTTAATTTTAATTGGTTAA+AGG | + | chr7.2:23827588-23827607 | MS.gene54974:intron | 15.0% |
| !!! | TTAAGTTGATTAATCTAAAA+AGG | - | chr7.2:23826582-23826601 | None:intergenic | 15.0% |
| !! | AAAAATTCAATGACCTTAAA+TGG | - | chr7.2:23827893-23827912 | None:intergenic | 20.0% |
| !! | AAACTAAAATCTACAAAGAA+TGG | - | chr7.2:23828150-23828169 | None:intergenic | 20.0% |
| !! | AAATTAAGCAAAGAAGTAAA+CGG | - | chr7.2:23826394-23826413 | None:intergenic | 20.0% |
| !! | AAGAGAAATAGTAATGATTA+TGG | + | chr7.2:23826439-23826458 | MS.gene54974:CDS | 20.0% |
| !! | ATAATGAATTTGAGTAAACT+AGG | + | chr7.2:23827312-23827331 | MS.gene54974:intron | 20.0% |
| !! | GTTGAAAATAATAATACACT+TGG | + | chr7.2:23829426-23829445 | MS.gene54974:intron | 20.0% |
| !! | TATGACAATGTAGTAAATAA+AGG | - | chr7.2:23828929-23828948 | None:intergenic | 20.0% |
| !! | TCTATTAATATACTAGTATG+AGG | + | chr7.2:23828571-23828590 | MS.gene54974:intron | 20.0% |
| !! | TGCATTAATTGAGTTTATTA+CGG | + | chr7.2:23827918-23827937 | MS.gene54974:intron | 20.0% |
| !! | TTAAGGAAATGTGATTTAAA+TGG | + | chr7.2:23828454-23828473 | MS.gene54974:intron | 20.0% |
| !! | TTATCCAAAATTGAATGATT+GGG | + | chr7.2:23829355-23829374 | MS.gene54974:intron | 20.0% |
| !!! | AAATATTTTACACATTCACA+AGG | + | chr7.2:23827132-23827151 | MS.gene54974:intron | 20.0% |
| !!! | ATTACATTTTTAATGACTGA+TGG | + | chr7.2:23827285-23827304 | MS.gene54974:intron | 20.0% |
| !!! | GTATTATTATTTTCAACTTG+GGG | - | chr7.2:23829423-23829442 | None:intergenic | 20.0% |
| !!! | GTGTATTATTATTTTCAACT+TGG | - | chr7.2:23829425-23829444 | None:intergenic | 20.0% |
| !!! | TAATAGGCTTTTAATTTTAC+TGG | + | chr7.2:23827447-23827466 | MS.gene54974:intron | 20.0% |
| !!! | TGAATTTTTCTCATTAGTTT+CGG | + | chr7.2:23827472-23827491 | MS.gene54974:intron | 20.0% |
| ! | AAAACACAAATTAACAAACC+TGG | - | chr7.2:23826516-23826535 | None:intergenic | 25.0% |
| ! | AAACACAAATTAACAAACCT+GGG | - | chr7.2:23826515-23826534 | None:intergenic | 25.0% |
| ! | AATATGAATTGCTCAACATT+TGG | + | chr7.2:23828097-23828116 | MS.gene54974:CDS | 25.0% |
| ! | AATGATTATGGAAATGAATC+TGG | + | chr7.2:23826451-23826470 | MS.gene54974:CDS | 25.0% |
| ! | ATACATACAGAAAAAACTGT+GGG | + | chr7.2:23828700-23828719 | MS.gene54974:intron | 25.0% |
| ! | ATTGAATTGCAAACTGTTTA+AGG | + | chr7.2:23828437-23828456 | MS.gene54974:intron | 25.0% |
| ! | CTTATCCAAAATTGAATGAT+TGG | + | chr7.2:23829354-23829373 | MS.gene54974:intron | 25.0% |
| ! | GAATGTGTAAAATATTTGAC+TGG | - | chr7.2:23827129-23827148 | None:intergenic | 25.0% |
| ! | GGCAAAAATATTTCAAAAGA+AGG | - | chr7.2:23827854-23827873 | None:intergenic | 25.0% |
| ! | TAAACTTTAACCACAATGAA+AGG | - | chr7.2:23826855-23826874 | None:intergenic | 25.0% |
| ! | TAAATAAAGGCCAAATCATA+TGG | - | chr7.2:23828916-23828935 | None:intergenic | 25.0% |
| ! | TATACATACAGAAAAAACTG+TGG | + | chr7.2:23828699-23828718 | MS.gene54974:intron | 25.0% |
| ! | TATCCAAAATTGAATGATTG+GGG | + | chr7.2:23829356-23829375 | MS.gene54974:intron | 25.0% |
| ! | TATTCATATTTATTGTCCCA+CGG | + | chr7.2:23827210-23827229 | MS.gene54974:intron | 25.0% |
| ! | TGTTATGGATTCAATCAATT+TGG | - | chr7.2:23829110-23829129 | None:intergenic | 25.0% |
| ! | TTCATTTGTATTTGCTTATG+AGG | - | chr7.2:23829310-23829329 | None:intergenic | 25.0% |
| !! | AACACACTTAACAATTTTTC+TGG | + | chr7.2:23828266-23828285 | MS.gene54974:intron | 25.0% |
| !! | ATATTTCAAAAGAAGGTACA+AGG | - | chr7.2:23827847-23827866 | None:intergenic | 25.0% |
| !! | ATTTTGCAAAGACAAACAAT+TGG | - | chr7.2:23828996-23829015 | None:intergenic | 25.0% |
| !! | GAACTTTTACTCTTGTTAAT+AGG | + | chr7.2:23827431-23827450 | MS.gene54974:intron | 25.0% |
| !! | TATTTCAAAAGAAGGTACAA+GGG | - | chr7.2:23827846-23827865 | None:intergenic | 25.0% |
| !! | TCAACTTTTAATATGGTACA+AGG | + | chr7.2:23828296-23828315 | MS.gene54974:intron | 25.0% |
| !! | TTTTGGATAAGTAATCGTAT+AGG | - | chr7.2:23829345-23829364 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTCTGTATGTAT+AGG | - | chr7.2:23828700-23828719 | None:intergenic | 25.0% |
| !!! | GCAACTTTCTTTTTCAAAAT+TGG | - | chr7.2:23828650-23828669 | None:intergenic | 25.0% |
| !!! | TTACTTATGTGCTTATTTTG+TGG | + | chr7.2:23829456-23829475 | MS.gene54974:intron | 25.0% |
| AACACAAATTAACAAACCTG+GGG | - | chr7.2:23826514-23826533 | None:intergenic | 30.0% | |
| AATTGGCAAAAATGCCAAAA+TGG | + | chr7.2:23826902-23826921 | MS.gene54974:intron | 30.0% | |
| ACATTGAATCAAAGCAATGT+AGG | - | chr7.2:23828726-23828745 | None:intergenic | 30.0% | |
| AGCACTATTTCCATATGATT+TGG | + | chr7.2:23828903-23828922 | MS.gene54974:intron | 30.0% | |
| AGGAAGATAAGTAGTTGAAA+AGG | + | chr7.2:23826694-23826713 | MS.gene54974:intron | 30.0% | |
| ATCCAAAATTGAATGATTGG+GGG | + | chr7.2:23829357-23829376 | MS.gene54974:intron | 30.0% | |
| ATCTCTGAGCTTAATGTATT+AGG | + | chr7.2:23828346-23828365 | MS.gene54974:intron | 30.0% | |
| ATGCAAGATAACAACACATT+AGG | - | chr7.2:23827687-23827706 | None:intergenic | 30.0% | |
| ATGTGATTTAAATGGTTGAG+TGG | + | chr7.2:23828462-23828481 | MS.gene54974:intron | 30.0% | |
| ATTGAATCCATAACATACAG+TGG | + | chr7.2:23829115-23829134 | MS.gene54974:CDS | 30.0% | |
| CTTTAATGTAAGGACTTTGA+TGG | + | chr7.2:23828530-23828549 | MS.gene54974:intron | 30.0% | |
| GATTCAAGCTCTTTAATGTA+AGG | + | chr7.2:23828520-23828539 | MS.gene54974:intron | 30.0% | |
| GCAAAATTTGCAGAATCAAT+CGG | + | chr7.2:23829009-23829028 | MS.gene54974:intron | 30.0% | |
| GGAAGATAAGTAGTTGAAAA+GGG | + | chr7.2:23826695-23826714 | MS.gene54974:intron | 30.0% | |
| TAAAATCTCAGTTGAGATCT+TGG | + | chr7.2:23827797-23827816 | MS.gene54974:intron | 30.0% | |
| TCAAGAGATATGACATATGA+TGG | + | chr7.2:23828025-23828044 | MS.gene54974:CDS | 30.0% | |
| TCATGCTTGGTTTATCTATA+GGG | + | chr7.2:23828957-23828976 | MS.gene54974:intron | 30.0% | |
| TTTCTACTTTCTTCTTCACA+TGG | - | chr7.2:23829051-23829070 | None:intergenic | 30.0% | |
| TTTGAAAAAGAAAGTTGCGT+GGG | + | chr7.2:23828652-23828671 | MS.gene54974:intron | 30.0% | |
| ! | ATTTTACACATTCACAAGGT+CGG | + | chr7.2:23827136-23827155 | MS.gene54974:intron | 30.0% |
| ! | TACACATCTTGCAATGATTT+TGG | - | chr7.2:23828076-23828095 | None:intergenic | 30.0% |
| ! | TTAATTCCTTGGTAGACTTT+TGG | - | chr7.2:23828377-23828396 | None:intergenic | 30.0% |
| ! | TTTTCGTCTGAATTTGATGT+TGG | + | chr7.2:23826412-23826431 | MS.gene54974:CDS | 30.0% |
| !! | GAAGATTTGCTATGAATCTT+GGG | - | chr7.2:23828802-23828821 | None:intergenic | 30.0% |
| !! | GTAGCATTGACATGAAAATT+TGG | + | chr7.2:23827363-23827382 | MS.gene54974:intron | 30.0% |
| !! | TGTAGCTTTAATGTTGAACT+AGG | - | chr7.2:23828839-23828858 | None:intergenic | 30.0% |
| !! | TTTTGAAAAAGAAAGTTGCG+TGG | + | chr7.2:23828651-23828670 | MS.gene54974:intron | 30.0% |
| !!! | AAGTTTTGTTCCTTTCATTG+TGG | + | chr7.2:23826842-23826861 | MS.gene54974:intron | 30.0% |
| !!! | CAATGATTTTGGAATCGATA+AGG | - | chr7.2:23828065-23828084 | None:intergenic | 30.0% |
| AAATATTTGACTGGCAATCC+AGG | - | chr7.2:23827120-23827139 | None:intergenic | 35.0% | |
| AATGTAACTAAACCGACGTT+TGG | - | chr7.2:23827014-23827033 | None:intergenic | 35.0% | |
| AATTGGTTAAAGGGTGATGT+AGG | + | chr7.2:23827598-23827617 | MS.gene54974:intron | 35.0% | |
| ACAAACAATTGGTCAAGCAT+TGG | - | chr7.2:23828985-23829004 | None:intergenic | 35.0% | |
| ACAGAAAGCTGCAAATAAGA+TGG | - | chr7.2:23827724-23827743 | None:intergenic | 35.0% | |
| ACAGCAATTGACAAGTAGTA+GGG | - | chr7.2:23828405-23828424 | None:intergenic | 35.0% | |
| ACCAGAGGTAATAACATTCA+AGG | - | chr7.2:23827238-23827257 | None:intergenic | 35.0% | |
| AGCAACAAGAAAACTAGAGA+TGG | + | chr7.2:23829070-23829089 | MS.gene54974:CDS | 35.0% | |
| AGCAACATAAATGCCAAGAT+TGG | + | chr7.2:23829190-23829209 | MS.gene54974:CDS | 35.0% | |
| ATGGAGTTAGATATAGAGGA+TGG | + | chr7.2:23827045-23827064 | MS.gene54974:intron | 35.0% | |
| ATTGGTTAAAGGGTGATGTA+GGG | + | chr7.2:23827599-23827618 | MS.gene54974:intron | 35.0% | |
| CTCAAAAGATGTTCCATAAC+TGG | - | chr7.2:23829154-23829173 | None:intergenic | 35.0% | |
| CTCCTACTTGACAATGAAAT+TGG | + | chr7.2:23827650-23827669 | MS.gene54974:intron | 35.0% | |
| GAAACTAGCAAAGAATGGTA+AGG | - | chr7.2:23827518-23827537 | None:intergenic | 35.0% | |
| GAACTAGGTACAACTAAAGT+TGG | - | chr7.2:23828824-23828843 | None:intergenic | 35.0% | |
| GACCAATTTCATTGTCAAGT+AGG | - | chr7.2:23827655-23827674 | None:intergenic | 35.0% | |
| GCAACAAGAAAACTAGAGAT+GGG | + | chr7.2:23829071-23829090 | MS.gene54974:CDS | 35.0% | |
| GCAACTGATGATATTCAAGA+AGG | + | chr7.2:23829575-23829594 | MS.gene54974:CDS | 35.0% | |
| GTAGGGTAGTATTAATTCCT+TGG | - | chr7.2:23828388-23828407 | None:intergenic | 35.0% | |
| GTCATGCTTGGTTTATCTAT+AGG | + | chr7.2:23828956-23828975 | MS.gene54974:intron | 35.0% | |
| TACAGCAATTGACAAGTAGT+AGG | - | chr7.2:23828406-23828425 | None:intergenic | 35.0% | |
| TCAATGTACAGAGTTCACAT+GGG | + | chr7.2:23828739-23828758 | MS.gene54974:intron | 35.0% | |
| TCATATATTGCTGTCATGCT+TGG | + | chr7.2:23828944-23828963 | MS.gene54974:intron | 35.0% | |
| TCCAAAATTGAATGATTGGG+GGG | + | chr7.2:23829358-23829377 | MS.gene54974:intron | 35.0% | |
| TCGGTTTAGTTACATTACCA+AGG | + | chr7.2:23827018-23827037 | MS.gene54974:intron | 35.0% | |
| TGGAGTTAGATATAGAGGAT+GGG | + | chr7.2:23827046-23827065 | MS.gene54974:intron | 35.0% | |
| TGGGTTTAATAGCTTGGAAA+AGG | + | chr7.2:23828671-23828690 | MS.gene54974:intron | 35.0% | |
| TTCAAATTCCGCTACGAAAA+CGG | - | chr7.2:23826215-23826234 | None:intergenic | 35.0% | |
| TTCAATGTACAGAGTTCACA+TGG | + | chr7.2:23828738-23828757 | MS.gene54974:intron | 35.0% | |
| TTCGATGGAGTTAGATATAG+AGG | + | chr7.2:23827041-23827060 | MS.gene54974:intron | 35.0% | |
| TTGAATGTTATTACCTCTGG+TGG | + | chr7.2:23827237-23827256 | MS.gene54974:intron | 35.0% | |
| ! | AGATATGACATATGATGGTG+TGG | + | chr7.2:23828030-23828049 | MS.gene54974:CDS | 35.0% |
| ! | ATGAATCTGGTCTTCTTCTT+TGG | + | chr7.2:23826464-23826483 | MS.gene54974:CDS | 35.0% |
| ! | GTGACATTGAACTAGGTTTT+CGG | - | chr7.2:23826038-23826057 | None:intergenic | 35.0% |
| ! | GTTATGGAACATCTTTTGAG+TGG | + | chr7.2:23829154-23829173 | MS.gene54974:CDS | 35.0% |
| ! | TCTCATTAGTTTCGGTTACT+AGG | + | chr7.2:23827480-23827499 | MS.gene54974:intron | 35.0% |
| ! | TGAATCTGGTCTTCTTCTTT+GGG | + | chr7.2:23826465-23826484 | MS.gene54974:CDS | 35.0% |
| ! | TTTTGCCTGTCCTTAAGTTA+GGG | + | chr7.2:23827867-23827886 | MS.gene54974:intron | 35.0% |
| ! | TTTTTGCCTGTCCTTAAGTT+AGG | + | chr7.2:23827866-23827885 | MS.gene54974:intron | 35.0% |
| !! | GGAAGATTTGCTATGAATCT+TGG | - | chr7.2:23828803-23828822 | None:intergenic | 35.0% |
| !! | TTTTGCAGTTTTGGCAGATT+TGG | - | chr7.2:23825988-23826007 | None:intergenic | 35.0% |
| AAGTACCAGATAGAGAGGAA+GGG | - | chr7.2:23827540-23827559 | None:intergenic | 40.0% | |
| AATGCTCTTCCTGCATATGT+TGG | - | chr7.2:23827767-23827786 | None:intergenic | 40.0% | |
| AATGTTATTACCTCTGGTGG+AGG | + | chr7.2:23827240-23827259 | MS.gene54974:intron | 40.0% | |
| ACAAAGGTTCAATCCTTGTC+AGG | + | chr7.2:23827086-23827105 | MS.gene54974:intron | 40.0% | |
| ACAAATTAACAAACCTGGGG+AGG | - | chr7.2:23826511-23826530 | None:intergenic | 40.0% | |
| ACTAGCAAAGAATGGTAAGG+AGG | - | chr7.2:23827515-23827534 | None:intergenic | 40.0% | |
| AGCACATTCGCTATGAATCA+AGG | + | chr7.2:23829504-23829523 | MS.gene54974:CDS | 40.0% | |
| AGGAGAAGAAGAAAACTCGA+AGG | + | chr7.2:23829260-23829279 | MS.gene54974:CDS | 40.0% | |
| AGTAAACTAGGCTGCATTGT+TGG | + | chr7.2:23827324-23827343 | MS.gene54974:intron | 40.0% | |
| AGTAGAAACGATCTCGTGAA+CGG | - | chr7.2:23826164-23826183 | None:intergenic | 40.0% | |
| ATACGAGAAAGAGAGTGAGA+GGG | + | chr7.2:23829540-23829559 | MS.gene54974:CDS | 40.0% | |
| ATGTTATTACCTCTGGTGGA+GGG | + | chr7.2:23827241-23827260 | MS.gene54974:intron | 40.0% | |
| CAATGTACAGAGTTCACATG+GGG | + | chr7.2:23828740-23828759 | MS.gene54974:intron | 40.0% | |
| CACGAGATCGTTTCTACTTT+GGG | + | chr7.2:23826166-23826185 | MS.gene54974:CDS | 40.0% | |
| CATTCGCTATGAATCAAGGA+AGG | + | chr7.2:23829508-23829527 | MS.gene54974:CDS | 40.0% | |
| CCAAAATTGAATGATTGGGG+GGG | + | chr7.2:23829359-23829378 | MS.gene54974:intron | 40.0% | |
| CCTTAAATGGCCCTAACTTA+AGG | - | chr7.2:23827880-23827899 | None:intergenic | 40.0% | |
| CCTTAAGTTAGGGCCATTTA+AGG | + | chr7.2:23827877-23827896 | MS.gene54974:intron | 40.0% | |
| CTATGAATCAAGGAAGGCTA+GGG | + | chr7.2:23829514-23829533 | MS.gene54974:CDS | 40.0% | |
| GAAGGGAAACTAGCAAAGAA+TGG | - | chr7.2:23827523-23827542 | None:intergenic | 40.0% | |
| GAATCACCAAAAGTCTACCA+AGG | + | chr7.2:23828368-23828387 | MS.gene54974:intron | 40.0% | |
| GCAAAAATGCCAAAATGGCT+AGG | + | chr7.2:23826907-23826926 | MS.gene54974:intron | 40.0% | |
| GCAAACTAAACAGAGTTTCG+CGG | - | chr7.2:23825915-23825934 | None:intergenic | 40.0% | |
| GCCTTGAATGTTATTACCTC+TGG | + | chr7.2:23827234-23827253 | MS.gene54974:intron | 40.0% | |
| GGAGTTAGATATAGAGGATG+GGG | + | chr7.2:23827047-23827066 | MS.gene54974:intron | 40.0% | |
| GTTACATTACCAAGGTTCGA+TGG | + | chr7.2:23827026-23827045 | MS.gene54974:intron | 40.0% | |
| TAGTCTTTGTACGTTTGTGC+AGG | + | chr7.2:23827979-23827998 | MS.gene54974:intron | 40.0% | |
| TATCTAACTCCATCGAACCT+TGG | - | chr7.2:23827038-23827057 | None:intergenic | 40.0% | |
| TCACGAGATCGTTTCTACTT+TGG | + | chr7.2:23826165-23826184 | MS.gene54974:CDS | 40.0% | |
| TCATCCCTATTCTTCACAAC+CGG | - | chr7.2:23826250-23826269 | None:intergenic | 40.0% | |
| TGAAGCAAACCAACATATGC+AGG | + | chr7.2:23827755-23827774 | MS.gene54974:intron | 40.0% | |
| TTCCATAACTGGTACACTGT+CGG | - | chr7.2:23829143-23829162 | None:intergenic | 40.0% | |
| ! | AAGAGCACACAAGGAATAGA+GGG | + | chr7.2:23829218-23829237 | MS.gene54974:CDS | 40.0% |
| ! | CATAAATGCCAAGATTGGCT+TGG | + | chr7.2:23829195-23829214 | MS.gene54974:CDS | 40.0% |
| ! | GCATTTTTGCCAATTGAGCT+AGG | - | chr7.2:23826897-23826916 | None:intergenic | 40.0% |
| ! | TGTTGGTTACTAGGTGAATG+AGG | + | chr7.2:23827341-23827360 | MS.gene54974:intron | 40.0% |
| !! | AATAACATTCAAGGCACCGT+GGG | - | chr7.2:23827229-23827248 | None:intergenic | 40.0% |
| !! | GTTTTCGTAGCGGAATTTGA+AGG | + | chr7.2:23826214-23826233 | MS.gene54974:CDS | 40.0% |
| !! | TAATAACATTCAAGGCACCG+TGG | - | chr7.2:23827230-23827249 | None:intergenic | 40.0% |
| !!! | TTCGTCGATTTTCCAAACGT+CGG | + | chr7.2:23826999-23827018 | MS.gene54974:intron | 40.0% |
| AACCGGTGAGACCTTCTATA+CGG | - | chr7.2:23826135-23826154 | None:intergenic | 45.0% | |
| AACGCAAGTACCAGATAGAG+AGG | - | chr7.2:23827545-23827564 | None:intergenic | 45.0% | |
| AATGGCCCTAACTTAAGGAC+AGG | - | chr7.2:23827875-23827894 | None:intergenic | 45.0% | |
| AGAGCACACAAGGAATAGAG+GGG | + | chr7.2:23829219-23829238 | MS.gene54974:CDS | 45.0% | |
| AGTTTCCCTTCCTCTCTATC+TGG | + | chr7.2:23827532-23827551 | MS.gene54974:CDS | 45.0% | |
| ATAGAGGGGATGCCATGTTA+CGG | + | chr7.2:23829233-23829252 | MS.gene54974:CDS | 45.0% | |
| CAAGTACCAGATAGAGAGGA+AGG | - | chr7.2:23827541-23827560 | None:intergenic | 45.0% | |
| CTATTGCGACACAAGAAACG+CGG | + | chr7.2:23825868-23825887 | MS.gene54974:CDS | 45.0% | |
| CTTCTCCTTGTACCGTAACA+TGG | - | chr7.2:23829248-23829267 | None:intergenic | 45.0% | |
| CTTGTGTCGCAATAGTCACA+CGG | - | chr7.2:23825863-23825882 | None:intergenic | 45.0% | |
| GAAGAGGAAGAGGAATTTGG+AGG | + | chr7.2:23826297-23826316 | MS.gene54974:CDS | 45.0% | |
| GACGAAATGACCATCACGTT+TGG | - | chr7.2:23826985-23827004 | None:intergenic | 45.0% | |
| GACGTAAGTCCTAGCTCAAT+TGG | + | chr7.2:23826885-23826904 | MS.gene54974:intron | 45.0% | |
| GATACGAGAAAGAGAGTGAG+AGG | + | chr7.2:23829539-23829558 | MS.gene54974:CDS | 45.0% | |
| GCTACGAAAACGGAGTCATT+CGG | - | chr7.2:23826205-23826224 | None:intergenic | 45.0% | |
| GCTATGAATCAAGGAAGGCT+AGG | + | chr7.2:23829513-23829532 | MS.gene54974:CDS | 45.0% | |
| GGTTCCGGTTGTGAAGAATA+GGG | + | chr7.2:23826243-23826262 | MS.gene54974:CDS | 45.0% | |
| GGTTGTGAAGAATAGGGATG+AGG | + | chr7.2:23826249-23826268 | MS.gene54974:CDS | 45.0% | |
| GTTGCGTGGGTTTAATAGCT+TGG | + | chr7.2:23828665-23828684 | MS.gene54974:intron | 45.0% | |
| TAGGCTAGACGATGTGATGA+GGG | + | chr7.2:23826926-23826945 | MS.gene54974:intron | 45.0% | |
| TAGGGATGAGGTGTATGAAC+AGG | + | chr7.2:23826261-23826280 | MS.gene54974:CDS | 45.0% | |
| TGCGAAGAGGAAGAGGAATT+TGG | + | chr7.2:23826294-23826313 | MS.gene54974:CDS | 45.0% | |
| TGGTGGAAAGATGAAGAGGT+GGG | - | chr7.2:23826100-23826119 | None:intergenic | 45.0% | |
| TGGTTCCGGTTGTGAAGAAT+AGG | + | chr7.2:23826242-23826261 | MS.gene54974:CDS | 45.0% | |
| TGGTTGAGTGGATGATGCAA+AGG | + | chr7.2:23828474-23828493 | MS.gene54974:intron | 45.0% | |
| TGTGGCATCAAACTTTGCAC+AGG | + | chr7.2:23829474-23829493 | MS.gene54974:intron | 45.0% | |
| TTAGACTGCGTGGCAAACAA+AGG | + | chr7.2:23827070-23827089 | MS.gene54974:intron | 45.0% | |
| TTGTACGTTTGTGCAGGTCT+GGG | + | chr7.2:23827985-23828004 | MS.gene54974:intron | 45.0% | |
| TTTGTACGTTTGTGCAGGTC+TGG | + | chr7.2:23827984-23828003 | MS.gene54974:intron | 45.0% | |
| ! | AGAATGGTAAGGAGGTGCAA+TGG | - | chr7.2:23827507-23827526 | None:intergenic | 45.0% |
| ! | AGGCTGCATTGTTGGTTACT+AGG | + | chr7.2:23827332-23827351 | MS.gene54974:intron | 45.0% |
| ! | ATCGTCTAGCCTAGCCATTT+TGG | - | chr7.2:23826919-23826938 | None:intergenic | 45.0% |
| ! | CCCCCCCAATCATTCAATTT+TGG | - | chr7.2:23829362-23829381 | None:intergenic | 45.0% |
| ! | GAAGAGCACACAAGGAATAG+AGG | + | chr7.2:23829217-23829236 | MS.gene54974:CDS | 45.0% |
| ! | GAATGACTCCGTTTTCGTAG+CGG | + | chr7.2:23826204-23826223 | MS.gene54974:CDS | 45.0% |
| !! | AGTGAGAGGGCGATTTGTTA+AGG | + | chr7.2:23829553-23829572 | MS.gene54974:CDS | 45.0% |
| AAACAGAGTTTCGCGGAGTC+TGG | - | chr7.2:23825908-23825927 | None:intergenic | 50.0% | |
| ATTTGAAGGTCCGGTGGTTC+CGG | + | chr7.2:23826228-23826247 | MS.gene54974:CDS | 50.0% | |
| CTAGGCTAGACGATGTGATG+AGG | + | chr7.2:23826925-23826944 | MS.gene54974:intron | 50.0% | |
| GAAACGATCTCGTGAACGGA+AGG | - | chr7.2:23826160-23826179 | None:intergenic | 50.0% | |
| GGATGAGGTGTATGAACAGG+TGG | + | chr7.2:23826264-23826283 | MS.gene54974:CDS | 50.0% | |
| GGATGCCATGTTACGGTACA+AGG | + | chr7.2:23829240-23829259 | MS.gene54974:CDS | 50.0% | |
| GGTGAAGCAACGAACTGAAG+CGG | - | chr7.2:23826017-23826036 | None:intergenic | 50.0% | |
| GGTGGAAAGATGAAGAGGTG+GGG | - | chr7.2:23826099-23826118 | None:intergenic | 50.0% | |
| GGTTCAATCCTTGTCAGGAG+AGG | + | chr7.2:23827091-23827110 | MS.gene54974:intron | 50.0% | |
| GTACAGAGTTCACATGGGGT+GGG | + | chr7.2:23828744-23828763 | MS.gene54974:intron | 50.0% | |
| GTGCGAGTTTCCAAACGTGA+TGG | + | chr7.2:23826972-23826991 | MS.gene54974:intron | 50.0% | |
| GTGCTCTTCCAAGCCAATCT+TGG | - | chr7.2:23829206-23829225 | None:intergenic | 50.0% | |
| TACAGAGTTCACATGGGGTG+GGG | + | chr7.2:23828745-23828764 | MS.gene54974:intron | 50.0% | |
| TCACAAGGTCGGCATATCTG+TGG | + | chr7.2:23827147-23827166 | MS.gene54974:intron | 50.0% | |
| TGAGGTGTATGAACAGGTGG+TGG | + | chr7.2:23826267-23826286 | MS.gene54974:CDS | 50.0% | |
| TGGAAACTCGCACACACAAG+TGG | - | chr7.2:23826965-23826984 | None:intergenic | 50.0% | |
| TGGAAGTTGCGAAGAGGAAG+AGG | + | chr7.2:23826287-23826306 | MS.gene54974:CDS | 50.0% | |
| TGTACAGAGTTCACATGGGG+TGG | + | chr7.2:23828743-23828762 | MS.gene54974:intron | 50.0% | |
| TTCAATGTCACCGCTGCGAT+TGG | + | chr7.2:23826047-23826066 | MS.gene54974:CDS | 50.0% | |
| TTCTTCACAACCGGAACCAC+CGG | - | chr7.2:23826241-23826260 | None:intergenic | 50.0% | |
| ! | CGTAGCGGAATTTGAAGGTC+CGG | + | chr7.2:23826219-23826238 | MS.gene54974:CDS | 50.0% |
| ! | GTGGTGGAAAGATGAAGAGG+TGG | - | chr7.2:23826101-23826120 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGAAAGATGAAG+AGG | - | chr7.2:23826104-23826123 | None:intergenic | 50.0% |
| !! | TTGGCTTGGAAGAGCACACA+AGG | + | chr7.2:23829209-23829228 | MS.gene54974:CDS | 50.0% |
| !!! | CGGCGTCGTTTTTGCAGTTT+TGG | - | chr7.2:23825997-23826016 | None:intergenic | 50.0% |
| ACTCGCACACACAAGTGGCA+AGG | - | chr7.2:23826960-23826979 | None:intergenic | 55.0% | |
| AGCGGAATTTGAAGGTCCGG+TGG | + | chr7.2:23826222-23826241 | MS.gene54974:CDS | 55.0% | |
| CGCAGCGGTGACATTGAACT+AGG | - | chr7.2:23826045-23826064 | None:intergenic | 55.0% | |
| CGCCGACAGTGTACCAGTTA+TGG | + | chr7.2:23829138-23829157 | MS.gene54974:CDS | 55.0% | |
| CGCCGTATAGAAGGTCTCAC+CGG | + | chr7.2:23826130-23826149 | MS.gene54974:CDS | 55.0% | |
| CGCTGCGATTGGAACTCTCA+CGG | + | chr7.2:23826058-23826077 | MS.gene54974:CDS | 55.0% | |
| CGGTGAGACCTTCTATACGG+CGG | - | chr7.2:23826132-23826151 | None:intergenic | 55.0% | |
| CGTGAGAGTTCCAATCGCAG+CGG | - | chr7.2:23826060-23826079 | None:intergenic | 55.0% | |
| CTAGAGATTCCCTCCACCAG+AGG | - | chr7.2:23827253-23827272 | None:intergenic | 55.0% | |
| CTCGCACACACAAGTGGCAA+GGG | - | chr7.2:23826959-23826978 | None:intergenic | 55.0% | |
| CTCGTGAACGGAAGGACAAC+CGG | - | chr7.2:23826152-23826171 | None:intergenic | 55.0% | |
| CTCTGGTGGAGGGAATCTCT+AGG | + | chr7.2:23827251-23827270 | MS.gene54974:intron | 55.0% | |
| CTTGAGTGCGAGTGCGTTTG+CGG | - | chr7.2:23825954-23825973 | None:intergenic | 55.0% | |
| GTCGGCGCCACTGTATGTTA+TGG | - | chr7.2:23829125-23829144 | None:intergenic | 55.0% | |
| TCGCACACACAAGTGGCAAG+GGG | - | chr7.2:23826958-23826977 | None:intergenic | 55.0% | |
| TGAGACCTTCTATACGGCGG+CGG | - | chr7.2:23826129-23826148 | None:intergenic | 55.0% | |
| TGCGATTGGAACTCTCACGG+CGG | + | chr7.2:23826061-23826080 | MS.gene54974:CDS | 55.0% | |
| TGGGGAGGGACAATAGAGGT+CGG | + | chr7.2:23828763-23828782 | MS.gene54974:intron | 55.0% | |
| !! | AGGTGGTGGAAGTTGCGAAG+AGG | + | chr7.2:23826281-23826300 | MS.gene54974:CDS | 55.0% |
| AACCTGGGGAGGCTGATACG+TGG | - | chr7.2:23826500-23826519 | None:intergenic | 60.0% | |
| ACCTGGGGAGGCTGATACGT+GGG | - | chr7.2:23826499-23826518 | None:intergenic | 60.0% | |
| AGAGTTCACATGGGGTGGGG+AGG | + | chr7.2:23828748-23828767 | MS.gene54974:intron | 60.0% | |
| CACAACCGCCGCCGTATAGA+AGG | + | chr7.2:23826121-23826140 | MS.gene54974:CDS | 60.0% | |
| CCAGGTCTCCTCTCCTGACA+AGG | - | chr7.2:23827102-23827121 | None:intergenic | 60.0% | |
| CCTTGTCAGGAGAGGAGACC+TGG | + | chr7.2:23827099-23827118 | MS.gene54974:intron | 60.0% | |
| CTTCTATACGGCGGCGGTTG+TGG | - | chr7.2:23826123-23826142 | None:intergenic | 60.0% | |
| GAGGATGGGGTTAGACTGCG+TGG | + | chr7.2:23827060-23827079 | MS.gene54974:intron | 60.0% | |
| GAGTTCACATGGGGTGGGGA+GGG | + | chr7.2:23828749-23828768 | MS.gene54974:intron | 60.0% | |
| CGTTTGCGGAGTGCACGTGC+TGG | - | chr7.2:23825940-23825959 | None:intergenic | 65.0% | |
| CTATACGGCGGCGGTTGTGG+TGG | - | chr7.2:23826120-23826139 | None:intergenic | 65.0% | |
| GGGGTGGGGAGGGACAATAG+AGG | + | chr7.2:23828759-23828778 | MS.gene54974:intron | 65.0% | |
| TCCCACGTATCAGCCTCCCC+AGG | + | chr7.2:23826495-23826514 | MS.gene54974:intron | 65.0% | |
| TACGGCGGCGGTTGTGGTGG+TGG | - | chr7.2:23826117-23826136 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23825851 | 23829601 | 23825851 | ID=MS.gene54974 |
| chr7.2 | mRNA | 23825851 | 23829601 | 23825851 | ID=MS.gene54974.t1;Parent=MS.gene54974 |
| chr7.2 | exon | 23825851 | 23826500 | 23825851 | ID=MS.gene54974.t1.exon1;Parent=MS.gene54974.t1 |
| chr7.2 | CDS | 23825851 | 23826500 | 23825851 | ID=cds.MS.gene54974.t1;Parent=MS.gene54974.t1 |
| chr7.2 | exon | 23827502 | 23827553 | 23827502 | ID=MS.gene54974.t1.exon2;Parent=MS.gene54974.t1 |
| chr7.2 | CDS | 23827502 | 23827553 | 23827502 | ID=cds.MS.gene54974.t1;Parent=MS.gene54974.t1 |
| chr7.2 | exon | 23828001 | 23828141 | 23828001 | ID=MS.gene54974.t1.exon3;Parent=MS.gene54974.t1 |
| chr7.2 | CDS | 23828001 | 23828141 | 23828001 | ID=cds.MS.gene54974.t1;Parent=MS.gene54974.t1 |
| chr7.2 | exon | 23829022 | 23829281 | 23829022 | ID=MS.gene54974.t1.exon4;Parent=MS.gene54974.t1 |
| chr7.2 | CDS | 23829022 | 23829281 | 23829022 | ID=cds.MS.gene54974.t1;Parent=MS.gene54974.t1 |
| chr7.2 | exon | 23829496 | 23829601 | 23829496 | ID=MS.gene54974.t1.exon5;Parent=MS.gene54974.t1 |
| chr7.2 | CDS | 23829496 | 23829601 | 23829496 | ID=cds.MS.gene54974.t1;Parent=MS.gene54974.t1 |
| Gene Sequence |
| Protein sequence |
