Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55831.t1 | XP_013447246.1 | 99.2 | 867 | 7 | 0 | 24 | 890 | 1 | 867 | 0.00E+00 | 1701.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55831.t1 | Q9FJD4 | 81.6 | 868 | 156 | 3 | 24 | 889 | 1 | 866 | 0.0e+00 | 1416.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55831.t1 | A0A072TWL1 | 99.2 | 867 | 7 | 0 | 24 | 890 | 1 | 867 | 0.0e+00 | 1701.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06112 | MS.gene55831 | 0.990133 | 3.27E-181 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32605 | MS.gene55831 | PPI |
| MS.gene55831 | MS.gene014807 | PPI |
| MS.gene55831 | MS.gene32606 | PPI |
| MS.gene55831 | MS.gene014808 | PPI |
| MS.gene072925 | MS.gene55831 | PPI |
| MS.gene072924 | MS.gene55831 | PPI |
| MS.gene32604 | MS.gene55831 | PPI |
| MS.gene014809 | MS.gene55831 | PPI |
| MS.gene072926 | MS.gene55831 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55831.t1 | MTR_8g099785 | 99.078 | 868 | 8 | 0 | 24 | 891 | 1 | 868 | 0.0 | 1783 |
| MS.gene55831.t1 | MTR_3g491860 | 78.522 | 866 | 183 | 2 | 26 | 889 | 1 | 865 | 0.0 | 1399 |
| MS.gene55831.t1 | MTR_3g491840 | 74.194 | 868 | 220 | 3 | 26 | 891 | 1 | 866 | 0.0 | 1311 |
| MS.gene55831.t1 | MTR_1g059590 | 32.063 | 446 | 251 | 14 | 152 | 564 | 3 | 429 | 1.56e-43 | 167 |
| MS.gene55831.t1 | MTR_1g059590 | 31.435 | 439 | 230 | 14 | 152 | 564 | 3 | 396 | 3.76e-39 | 154 |
| MS.gene55831.t1 | MTR_1g112920 | 23.760 | 484 | 260 | 21 | 41 | 464 | 34 | 468 | 1.16e-20 | 98.2 |
| MS.gene55831.t1 | MTR_1g112920 | 23.760 | 484 | 260 | 21 | 41 | 464 | 34 | 468 | 1.64e-20 | 97.8 |
| MS.gene55831.t1 | MTR_2g006750 | 21.717 | 594 | 387 | 23 | 24 | 602 | 1 | 531 | 1.89e-12 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55831.t1 | AT5G53480 | 81.567 | 868 | 156 | 3 | 24 | 889 | 1 | 866 | 0.0 | 1458 |
| MS.gene55831.t1 | AT3G08947 | 59.146 | 656 | 262 | 5 | 238 | 890 | 1 | 653 | 0.0 | 772 |
| MS.gene55831.t1 | AT3G08947 | 62.116 | 586 | 216 | 5 | 238 | 820 | 1 | 583 | 0.0 | 729 |
| MS.gene55831.t1 | AT2G16950 | 23.826 | 575 | 316 | 21 | 51 | 559 | 39 | 557 | 2.25e-24 | 110 |
| MS.gene55831.t1 | AT2G16960 | 24.009 | 429 | 254 | 14 | 350 | 732 | 8 | 410 | 1.04e-13 | 75.1 |
| MS.gene55831.t1 | AT5G19820 | 20.211 | 663 | 427 | 24 | 43 | 669 | 38 | 634 | 2.56e-13 | 74.7 |
Find 239 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTGACTCCCTTCTTTC+AGG | 0.134357 | 4.3:+4218532 | MS.gene55831:CDS |
| CCTGGTAGTCCTCAAAATTT+TGG | 0.156124 | 4.3:-4219012 | None:intergenic |
| CACTTCAGGCAATTGAATTT+TGG | 0.183012 | 4.3:+4217874 | MS.gene55831:CDS |
| GTTATATTCTCTTCAATAAA+TGG | 0.205370 | 4.3:-4218152 | None:intergenic |
| ATTTCTTGTTCCCATGTTAT+TGG | 0.237769 | 4.3:+4218001 | MS.gene55831:CDS |
| CAGAGGATAAGCACTCTTTC+AGG | 0.242624 | 4.3:-4219659 | None:intergenic |
| TTACGCATTTGGCTCCATTT+TGG | 0.253121 | 4.3:+4218208 | MS.gene55831:CDS |
| ACTTGTGCCACTTGTGAATA+TGG | 0.256386 | 4.3:+4218250 | MS.gene55831:CDS |
| ATGATTGGTGTTGGTCAAAT+TGG | 0.265272 | 4.3:+4216404 | MS.gene55831:CDS |
| GCAGTATGCTGATCAAATTA+TGG | 0.274415 | 4.3:+4218847 | MS.gene55831:CDS |
| CAAGTCATTATTCAGAAGTT+AGG | 0.280801 | 4.3:+4218794 | MS.gene55831:CDS |
| TGAAGAGCCTGTTGCACTTC+AGG | 0.288892 | 4.3:+4217860 | MS.gene55831:CDS |
| CATCGTCAGCCCCATTAGTA+TGG | 0.289010 | 4.3:-4219279 | None:intergenic |
| GATACTCACTGCAGTTGTTC+AGG | 0.299274 | 4.3:+4217566 | MS.gene55831:CDS |
| CCACTGCTTGGGCATTTAAC+AGG | 0.303789 | 4.3:-4217068 | None:intergenic |
| TTAGGGTTTATGATTGGTTT+TGG | 0.307095 | 4.3:+4216367 | None:intergenic |
| AGCTCTCTGCCCATACTAAT+GGG | 0.311132 | 4.3:+4219269 | MS.gene55831:CDS |
| TGATTGGTGTTGGTCAAATT+GGG | 0.315257 | 4.3:+4216405 | MS.gene55831:CDS |
| CCATCAGGAGCTGTGTCTTT+GGG | 0.315481 | 4.3:-4219381 | None:intergenic |
| GCCATCAGGAGCTGTGTCTT+TGG | 0.315677 | 4.3:-4219382 | None:intergenic |
| AGCAAGAGAAAATAAGAAAC+TGG | 0.318864 | 4.3:-4217151 | None:intergenic |
| AATGCTTGCCATTGGTGCCT+TGG | 0.327556 | 4.3:+4218922 | MS.gene55831:CDS |
| GAGCTCTCTGCCCATACTAA+TGG | 0.341088 | 4.3:+4219268 | MS.gene55831:CDS |
| GTCTAATTGGGGTTTATGAT+TGG | 0.341267 | 4.3:+4216389 | MS.gene55831:CDS |
| GTGTCCTTCACATGATTGTT+TGG | 0.347716 | 4.3:-4218308 | None:intergenic |
| TTCATCTTCCCTCACAGCTT+TGG | 0.350492 | 4.3:-4217841 | None:intergenic |
| CAGTATGCTGATCAAATTAT+GGG | 0.353241 | 4.3:+4218848 | MS.gene55831:CDS |
| GGTTATGAGGATGCTGGATC+TGG | 0.354727 | 4.3:+4218503 | MS.gene55831:CDS |
| GTCATTATCCCATCACAATA+AGG | 0.359476 | 4.3:-4219097 | None:intergenic |
| TGGAGGTACTTGCCTGGGAT+TGG | 0.360619 | 4.3:+4218088 | MS.gene55831:CDS |
| GCAGTTTCCTTGATTGATGA+TGG | 0.367706 | 4.3:-4218390 | None:intergenic |
| GACACCACTGCATGGACTCT+TGG | 0.370639 | 4.3:+4218326 | MS.gene55831:CDS |
| CAGAAGAAAACAATGATGTT+AGG | 0.370918 | 4.3:+4217601 | MS.gene55831:CDS |
| TGTTCTGAGGCGGGACTCTC+CGG | 0.371354 | 4.3:-4218597 | None:intergenic |
| GCTTGGAACATTGCCATGGC+TGG | 0.372026 | 4.3:+4218068 | MS.gene55831:CDS |
| TGATCGGCAGAATGAGTTAC+AGG | 0.373312 | 4.3:+4218751 | MS.gene55831:CDS |
| CAGGCCTTCTCAGCAACATT+TGG | 0.374330 | 4.3:-4218455 | None:intergenic |
| AGGGGATGGACCTTCCAAAA+TGG | 0.375158 | 4.3:-4218222 | None:intergenic |
| TGCCCCAATGGTCGCTCAAC+TGG | 0.380509 | 4.3:+4218670 | MS.gene55831:CDS |
| AATAACATGGGAACAAGAAA+TGG | 0.381988 | 4.3:-4217999 | None:intergenic |
| TGATCCTGTTCTACCACATC+TGG | 0.389683 | 4.3:-4217534 | None:intergenic |
| TACACAAACACTTTAAGAAA+TGG | 0.393810 | 4.3:+4219313 | MS.gene55831:CDS |
| TTCCCCAGATGTGGTAGAAC+AGG | 0.395175 | 4.3:+4217530 | MS.gene55831:CDS |
| AGACCTATGCAACTGATTGC+TGG | 0.396439 | 4.3:-4219140 | None:intergenic |
| ACAAGTGGCACAAGTTTCTC+AGG | 0.400186 | 4.3:-4218242 | None:intergenic |
| TCCACACGTACTGCAATTCT+TGG | 0.401769 | 4.3:+4219411 | MS.gene55831:CDS |
| ATTGATATAATAGAAGAATA+TGG | 0.402981 | 4.3:+4217918 | MS.gene55831:CDS |
| TTCTACATATTATGAAAAGT+TGG | 0.403663 | 4.3:+4217785 | MS.gene55831:CDS |
| TGTCCTTCACATGATTGTTT+GGG | 0.405785 | 4.3:-4218307 | None:intergenic |
| GAAGCTGCAACTTACGCATT+TGG | 0.408628 | 4.3:+4218197 | MS.gene55831:CDS |
| GGTGACATTGCCTTGGCAAT+TGG | 0.409678 | 4.3:+4219190 | MS.gene55831:CDS |
| AAGCACGCCAATTGCTGTCT+TGG | 0.411502 | 4.3:-4219565 | None:intergenic |
| GCTATCACGGTGGGTGTTGT+AGG | 0.417143 | 4.3:+4219040 | MS.gene55831:CDS |
| AGACAACTTGAAGCAATTCC+AGG | 0.417432 | 4.3:+4217116 | MS.gene55831:CDS |
| CAGGAAGTCTTTGCTAGATA+CGG | 0.421192 | 4.3:-4219640 | None:intergenic |
| TCGAGAGTTGCTTGCCTGGT+AGG | 0.422233 | 4.3:-4217480 | None:intergenic |
| CCTCACAGCTTTGGCAGTGA+TGG | 0.423246 | 4.3:-4217832 | None:intergenic |
| AAGATCAGGACGAAGGGGCT+TGG | 0.423425 | 4.3:+4218051 | MS.gene55831:CDS |
| CATGGCTGGAGGTACTTGCC+TGG | 0.426721 | 4.3:+4218082 | MS.gene55831:CDS |
| GATAATGACCCAACTCCTTA+AGG | 0.426907 | 4.3:+4219111 | MS.gene55831:CDS |
| TCAATTGCCTGAAGTGCAAC+AGG | 0.431951 | 4.3:-4217867 | None:intergenic |
| GTCAAATTAGGGTTTATGAT+TGG | 0.432250 | 4.3:+4216361 | None:intergenic |
| TAACCAGTTGAGCGACCATT+GGG | 0.432444 | 4.3:-4218673 | None:intergenic |
| TACAGCTCCATCCACTGCTT+GGG | 0.433181 | 4.3:-4217079 | None:intergenic |
| GCACGTCGGATCTTCAGTTC+AGG | 0.434216 | 4.3:-4217735 | None:intergenic |
| TTACAGCTCCATCCACTGCT+TGG | 0.435941 | 4.3:-4217080 | None:intergenic |
| CTGAACAATTTCCTGAAAGA+AGG | 0.436938 | 4.3:-4218543 | None:intergenic |
| CGAGAGTTGCTTGCCTGGTA+GGG | 0.439906 | 4.3:-4217479 | None:intergenic |
| AAGACAGCAATTGGCGTGCT+TGG | 0.441158 | 4.3:+4219567 | MS.gene55831:CDS |
| GTGTTGTAGGTGATGTATGC+AGG | 0.441369 | 4.3:+4219053 | MS.gene55831:CDS |
| AACTGGGGAGATTCTGCTCC+TGG | 0.442025 | 4.3:-4217134 | None:intergenic |
| AGAATATAACTAAACAAGAT+TGG | 0.445539 | 4.3:+4218165 | MS.gene55831:CDS |
| CAGTTTCCTTGATTGATGAT+GGG | 0.446294 | 4.3:-4218389 | None:intergenic |
| TTTCCTCGCCCAAGGTTATG+AGG | 0.447160 | 4.3:+4218490 | MS.gene55831:CDS |
| TGGAGATTTAGCTGATACAT+TGG | 0.448027 | 4.3:+4219587 | MS.gene55831:CDS |
| GATGCAGTTGATCGAGCATC+AGG | 0.449020 | 4.3:-4217360 | None:intergenic |
| CAGAGAGCTCAGCAGCACTC+TGG | 0.450335 | 4.3:-4219255 | None:intergenic |
| ACACCACTGCATGGACTCTT+GGG | 0.452875 | 4.3:+4218327 | MS.gene55831:CDS |
| CTTGCAAGCAACCACATAGA+AGG | 0.452890 | 4.3:-4218775 | None:intergenic |
| AGATAGAATTTGTTCAAAGA+TGG | 0.453096 | 4.3:+4217268 | MS.gene55831:CDS |
| ATTAATTCTCAAGAATGCTC+TGG | 0.453554 | 4.3:+4217224 | MS.gene55831:CDS |
| CCAGAGAGTAGGAGGCTAGC+AGG | 0.454749 | 4.3:+4217201 | MS.gene55831:CDS |
| GTAGTCACGCTCCATATCAT+TGG | 0.457398 | 4.3:-4217679 | None:intergenic |
| CCTTCTGATTCTCAAGAGTC+TGG | 0.458641 | 4.3:-4218718 | None:intergenic |
| TCCTGAAAGAAGGGAGTCAA+TGG | 0.459959 | 4.3:-4218533 | None:intergenic |
| AAGCAATGGCCTGAGTTGAT+AGG | 0.460469 | 4.3:+4217423 | MS.gene55831:CDS |
| GATACATTGGGTAGTGCTGC+TGG | 0.460884 | 4.3:+4219600 | MS.gene55831:CDS |
| AGGTGATGTATGCAGGGCTT+TGG | 0.461239 | 4.3:+4219060 | MS.gene55831:CDS |
| GGTGCCTTGGCCTATGCGAC+CGG | 0.461623 | 4.3:+4218935 | MS.gene55831:CDS |
| TGCATTAAATGATGTTTCGT+TGG | 0.464790 | 4.3:-4218827 | None:intergenic |
| CAATGCACTGGGGTTTGCTC+AGG | 0.466486 | 4.3:+4217647 | MS.gene55831:CDS |
| GATCAAGGAATCTGCAGAAT+GGG | 0.471174 | 4.3:+4219692 | MS.gene55831:CDS |
| CCTGCTAGCCTCCTACTCTC+TGG | 0.477069 | 4.3:-4217201 | None:intergenic |
| ATACTCACTGCAGTTGTTCA+GGG | 0.477501 | 4.3:+4217567 | MS.gene55831:CDS |
| GATTGCTGGACAAATCCTTA+AGG | 0.479489 | 4.3:-4219126 | None:intergenic |
| CTGCTTTATAAAATAAAAGC+AGG | 0.479737 | 4.3:-4217970 | None:intergenic |
| TGGACAAATCCTTAAGGAGT+TGG | 0.480247 | 4.3:-4219120 | None:intergenic |
| TGTCTCGAGAGTTGCTTGCC+TGG | 0.482603 | 4.3:-4217484 | None:intergenic |
| CGTGTGGAGCATAAGCCATC+AGG | 0.483270 | 4.3:-4219396 | None:intergenic |
| TACTCGACCGAGTGCCAACT+TGG | 0.485525 | 4.3:-4219715 | None:intergenic |
| TGTTAGGCTTGCTGCCATAC+AGG | 0.486349 | 4.3:+4217617 | MS.gene55831:CDS |
| TGTTCAAAGATGGCTGGCTA+TGG | 0.486955 | 4.3:+4217278 | MS.gene55831:CDS |
| TGATGTATGCAGGGCTTTGG+AGG | 0.488355 | 4.3:+4219063 | MS.gene55831:CDS |
| TCCAGCATCCTCATAACCTT+GGG | 0.488936 | 4.3:-4218498 | None:intergenic |
| ATGCTTTGGTGACATTGCCT+TGG | 0.490682 | 4.3:+4219183 | MS.gene55831:CDS |
| CTCTGATGATCCTTTGATCA+AGG | 0.493103 | 4.3:+4219677 | MS.gene55831:CDS |
| ATCCAGCATCCTCATAACCT+TGG | 0.496201 | 4.3:-4218499 | None:intergenic |
| ACAGGCATTGTACAATGCAC+TGG | 0.496396 | 4.3:+4217635 | MS.gene55831:CDS |
| GGAGATTTAGCTGATACATT+GGG | 0.496630 | 4.3:+4219588 | MS.gene55831:CDS |
| GGACAAATCCTTAAGGAGTT+GGG | 0.496800 | 4.3:-4219119 | None:intergenic |
| TAAACAAGATTGGAGGCAAA+GGG | 0.502299 | 4.3:+4218175 | MS.gene55831:CDS |
| ATCAGCTTCCTGCCCCTACC+AGG | 0.502327 | 4.3:+4217466 | MS.gene55831:CDS |
| ATCTGCAGAATGGGCCAAGT+TGG | 0.503758 | 4.3:+4219701 | MS.gene55831:CDS |
| TTGGGGTTTATGATTGGTGT+TGG | 0.507269 | 4.3:+4216395 | MS.gene55831:CDS |
| GTTGCTTGCCTGGTAGGGGC+AGG | 0.509060 | 4.3:-4217474 | None:intergenic |
| ATGGCTGGAGGTACTTGCCT+GGG | 0.510391 | 4.3:+4218083 | MS.gene55831:CDS |
| ATATGCTGCTGTTCTGAGGC+GGG | 0.510421 | 4.3:-4218606 | None:intergenic |
| GCTCTTTATTTCCTCGCCCA+AGG | 0.513509 | 4.3:+4218482 | MS.gene55831:CDS |
| GAACATCTTTCATACTCTGA+AGG | 0.515677 | 4.3:-4218433 | None:intergenic |
| GTTGATCGAGCATCAGGAGA+TGG | 0.515853 | 4.3:-4217354 | None:intergenic |
| AGAAGCCTCCAGAGAGTAGG+AGG | 0.517901 | 4.3:+4217193 | MS.gene55831:CDS |
| CGCATAGGCCAAGGCACCAA+TGG | 0.518296 | 4.3:-4218930 | None:intergenic |
| CTAAACAAGATTGGAGGCAA+AGG | 0.518571 | 4.3:+4218174 | MS.gene55831:CDS |
| AGAATTTGTTCAAAGATGGC+TGG | 0.519883 | 4.3:+4217272 | MS.gene55831:CDS |
| TGTTCCAAATGTTGCTGAGA+AGG | 0.523547 | 4.3:+4218451 | MS.gene55831:CDS |
| GATTGGTGTTGGTCAAATTG+GGG | 0.523871 | 4.3:+4216406 | MS.gene55831:CDS |
| CAAGCAACTCTCGAGACACT+TGG | 0.524864 | 4.3:+4217489 | MS.gene55831:CDS |
| TGCATTGTACAATGCCTGTA+TGG | 0.525160 | 4.3:-4217631 | None:intergenic |
| AGATACGGATTGCTGAATCA+AGG | 0.525366 | 4.3:-4219625 | None:intergenic |
| AACTCAGGCCATTGCTTGTG+TGG | 0.526011 | 4.3:-4217417 | None:intergenic |
| TGATCAAGGAATCTGCAGAA+TGG | 0.527584 | 4.3:+4219691 | MS.gene55831:CDS |
| AAAGTACTGCCTTATTGTGA+TGG | 0.528988 | 4.3:+4219088 | MS.gene55831:CDS |
| CAGGCATTGTACAATGCACT+GGG | 0.531316 | 4.3:+4217636 | MS.gene55831:CDS |
| ACAAGAAGAAGATCAAGATC+AGG | 0.532148 | 4.3:+4218037 | MS.gene55831:CDS |
| GGCACAAGTTTCTCAGGGGA+TGG | 0.532459 | 4.3:-4218236 | None:intergenic |
| GGTATCTTGCAAGGTTTCAA+AGG | 0.535621 | 4.3:+4219355 | MS.gene55831:CDS |
| AAATTAAAGCATTATTGTTG+AGG | 0.536926 | 4.3:+4217319 | MS.gene55831:CDS |
| GTCAAATTGGGGTTTATCAG+TGG | 0.538340 | 4.3:+4216417 | MS.gene55831:CDS |
| ATGATGTTTCGTTGGTTCAG+AGG | 0.542632 | 4.3:-4218819 | None:intergenic |
| GAGAGTTGCTTGCCTGGTAG+GGG | 0.543011 | 4.3:-4217478 | None:intergenic |
| GTTGTGACCAAGACAGCAAT+TGG | 0.543566 | 4.3:+4219558 | MS.gene55831:CDS |
| CAAGTTGTAGCAAAAGTAGC+TGG | 0.546666 | 4.3:+4217384 | MS.gene55831:CDS |
| CTGTTCGTGCAACCAATCCC+AGG | 0.547121 | 4.3:-4218100 | None:intergenic |
| TAGCAGTGTCTCCAATAACA+TGG | 0.549544 | 4.3:-4218012 | None:intergenic |
| AAGCAGTGGATGGAGCTGTA+AGG | 0.550403 | 4.3:+4217082 | MS.gene55831:CDS |
| CTTCATATGCTGCTGTTCTG+AGG | 0.550654 | 4.3:-4218610 | None:intergenic |
| CATCACTGCCAAAGCTGTGA+GGG | 0.552784 | 4.3:+4217833 | MS.gene55831:CDS |
| GGAGCACAGTAATGATCTGT+TGG | 0.553103 | 4.3:-4218412 | None:intergenic |
| GATCCTGTTCTACCACATCT+GGG | 0.553388 | 4.3:-4217533 | None:intergenic |
| AAACTCAGTGCCGGTCGCAT+AGG | 0.553961 | 4.3:-4218945 | None:intergenic |
| GGAATCCTCGAGGCATACTC+AGG | 0.554014 | 4.3:+4219334 | MS.gene55831:CDS |
| CATATGCTGCTGTTCTGAGG+CGG | 0.555202 | 4.3:-4218607 | None:intergenic |
| TCTGCAGATTCCTTGATCAA+AGG | 0.555512 | 4.3:-4219687 | None:intergenic |
| GCCCAAGGTTATGAGGATGC+TGG | 0.556275 | 4.3:+4218497 | MS.gene55831:CDS |
| GTAACCAGTTGAGCGACCAT+TGG | 0.556674 | 4.3:-4218674 | None:intergenic |
| AAAGTTCTCTCCAATTGCCA+AGG | 0.557612 | 4.3:-4219200 | None:intergenic |
| TCAGCAGCACTCTGGAGCAT+AGG | 0.557925 | 4.3:-4219247 | None:intergenic |
| AAGATCAAGATCAGGACGAA+GGG | 0.561937 | 4.3:+4218045 | MS.gene55831:CDS |
| CCCAAAGACACAGCTCCTGA+TGG | 0.562014 | 4.3:+4219381 | MS.gene55831:CDS |
| AGTTTCCTTGATTGATGATG+GGG | 0.562642 | 4.3:-4218388 | None:intergenic |
| GGACAGTTTGTATAATGAGA+AGG | 0.563358 | 4.3:+4219432 | MS.gene55831:CDS |
| GTTATGAGGATGCTGGATCT+GGG | 0.563729 | 4.3:+4218504 | MS.gene55831:CDS |
| AGTGCCGGTCGCATAGGCCA+AGG | 0.564121 | 4.3:-4218939 | None:intergenic |
| TGAACAATTTCCTGAAAGAA+GGG | 0.564391 | 4.3:-4218542 | None:intergenic |
| TTGAGTTGCCACACAAGCAA+TGG | 0.565914 | 4.3:+4217409 | MS.gene55831:CDS |
| TGTCCAGCAATCAGTTGCAT+AGG | 0.567618 | 4.3:+4219137 | MS.gene55831:CDS |
| GAATGGGCCAAGTTGGCACT+CGG | 0.568465 | 4.3:+4219708 | MS.gene55831:CDS |
| CAGGTTTGTGCTATCACGGT+GGG | 0.569193 | 4.3:+4219031 | MS.gene55831:CDS |
| CAGGATCTGTGTAACTTCCA+TGG | 0.570571 | 4.3:-4217049 | None:intergenic |
| AAGTACTGCCTTATTGTGAT+GGG | 0.570745 | 4.3:+4219089 | MS.gene55831:CDS |
| CTACCAGGTTTGTGCTATCA+CGG | 0.572808 | 4.3:+4219027 | MS.gene55831:CDS |
| CCACCGTGATAGCACAAACC+TGG | 0.572956 | 4.3:-4219030 | None:intergenic |
| ACTGGTTACTGTCATCATGA+TGG | 0.574454 | 4.3:+4218688 | MS.gene55831:CDS |
| AAGTGCAACGGCTCATGAAG+AGG | 0.576373 | 4.3:+4218898 | MS.gene55831:CDS |
| GATACGGATTGCTGAATCAA+GGG | 0.577574 | 4.3:-4219624 | None:intergenic |
| TTAAATGCCCAAGCAGTGGA+TGG | 0.577816 | 4.3:+4217072 | MS.gene55831:CDS |
| ACGAGAAGCCTCCAGAGAGT+AGG | 0.581280 | 4.3:+4217190 | MS.gene55831:CDS |
| CAAGTGGCACAAGTTTCTCA+GGG | 0.582115 | 4.3:-4218241 | None:intergenic |
| ATTTGCTTCTCGAAGTGCAA+CGG | 0.582177 | 4.3:+4218886 | MS.gene55831:CDS |
| ATCGTCAGCCCCATTAGTAT+GGG | 0.583986 | 4.3:-4219278 | None:intergenic |
| GCATACTCAGGTATCTTGCA+AGG | 0.584240 | 4.3:+4219346 | MS.gene55831:CDS |
| GAGTTACAGGGCCTTCTATG+TGG | 0.585544 | 4.3:+4218764 | MS.gene55831:CDS |
| CATCAGGAGCTGTGTCTTTG+GGG | 0.586130 | 4.3:-4219380 | None:intergenic |
| TAATGATGATACTGCCCCAA+TGG | 0.589216 | 4.3:+4218658 | MS.gene55831:CDS |
| AGAAGGTCTCATCTGATGAT+CGG | 0.590815 | 4.3:+4218735 | MS.gene55831:CDS |
| GAATATGGTGGTGAGTTTAG+CGG | 0.591705 | 4.3:+4217933 | MS.gene55831:CDS |
| CATCCTCATAACCTTGGGCG+AGG | 0.592160 | 4.3:-4218493 | None:intergenic |
| GAGGAAATAAAGAGCCCCAC+AGG | 0.592672 | 4.3:-4218474 | None:intergenic |
| TGAAGAAGTTTCCCCAGATG+TGG | 0.592903 | 4.3:+4217521 | MS.gene55831:CDS |
| TGGTGATGATATCGTGCCGC+TGG | 0.593663 | 4.3:+4218124 | MS.gene55831:CDS |
| CTTCAGTTCAGGAGAAAGAG+TGG | 0.596383 | 4.3:-4217724 | None:intergenic |
| GCAAGAGAAAATAAGAAACT+GGG | 0.596667 | 4.3:-4217150 | None:intergenic |
| TGTTGTAGGTGATGTATGCA+GGG | 0.599790 | 4.3:+4219054 | MS.gene55831:CDS |
| AAGAGAGATCCTATCAACTC+AGG | 0.600840 | 4.3:-4217432 | None:intergenic |
| CATGCTAAATGCACTGACAA+AGG | 0.601069 | 4.3:+4218283 | MS.gene55831:CDS |
| ATGTTGCTGAGAAGGCCTGT+GGG | 0.602231 | 4.3:+4218459 | MS.gene55831:CDS |
| GAAGAGGCAATGCTTGCCAT+TGG | 0.606299 | 4.3:+4218914 | MS.gene55831:CDS |
| ATATAACTAAACAAGATTGG+AGG | 0.606900 | 4.3:+4218168 | MS.gene55831:CDS |
| CCTGTTAAATGCCCAAGCAG+TGG | 0.608616 | 4.3:+4217068 | MS.gene55831:CDS |
| CTCAAAGCCATATTCACAAG+TGG | 0.609599 | 4.3:-4218257 | None:intergenic |
| TCCAAGAATTGCAGTACGTG+TGG | 0.611322 | 4.3:-4219412 | None:intergenic |
| ATGTGAAGGACACCACTGCA+TGG | 0.613716 | 4.3:+4218318 | MS.gene55831:CDS |
| CAGGCAAGTACCTCCAGCCA+TGG | 0.613963 | 4.3:-4218081 | None:intergenic |
| GAAGATCAAGATCAGGACGA+AGG | 0.615536 | 4.3:+4218044 | MS.gene55831:CDS |
| GGATTGGTTGCACGAACAGT+TGG | 0.618513 | 4.3:+4218104 | MS.gene55831:CDS |
| ATACGGATTGCTGAATCAAG+GGG | 0.621023 | 4.3:-4219623 | None:intergenic |
| CCAGACTCTTGAGAATCAGA+AGG | 0.621657 | 4.3:+4218718 | MS.gene55831:CDS |
| AGCAGTGTCTCCAATAACAT+GGG | 0.623959 | 4.3:-4218011 | None:intergenic |
| TGGAACATTGCCATGGCTGG+AGG | 0.625120 | 4.3:+4218071 | MS.gene55831:CDS |
| GCTAGCCTCCTACTCTCTGG+AGG | 0.627410 | 4.3:-4217198 | None:intergenic |
| GTATTTAAGAAACTCAGTGC+CGG | 0.628766 | 4.3:-4218954 | None:intergenic |
| GTTTCCTTGATTGATGATGG+GGG | 0.631049 | 4.3:-4218387 | None:intergenic |
| GCTCTCTGCCCATACTAATG+GGG | 0.634636 | 4.3:+4219270 | MS.gene55831:CDS |
| TGCTTTATAAAATAAAAGCA+GGG | 0.635578 | 4.3:-4217969 | None:intergenic |
| TCAATAAATGGCATGACCAG+CGG | 0.635810 | 4.3:-4218140 | None:intergenic |
| GGACCCAAACAATCATGTGA+AGG | 0.641028 | 4.3:+4218304 | MS.gene55831:CDS |
| AGGGGCAGGAAGCTGATGAA+CGG | 0.641795 | 4.3:-4217460 | None:intergenic |
| GATATAATAGAAGAATATGG+TGG | 0.651482 | 4.3:+4217921 | MS.gene55831:CDS |
| AGGGGCTTGGAACATTGCCA+TGG | 0.653146 | 4.3:+4218064 | MS.gene55831:CDS |
| CCATCACTGCCAAAGCTGTG+AGG | 0.657942 | 4.3:+4217832 | MS.gene55831:CDS |
| AATGTTGCTGAGAAGGCCTG+TGG | 0.660902 | 4.3:+4218458 | MS.gene55831:CDS |
| CCAGGTTTGTGCTATCACGG+TGG | 0.662189 | 4.3:+4219030 | MS.gene55831:CDS |
| AAAGAAGGGAGTCAATGGAG+AGG | 0.666954 | 4.3:-4218528 | None:intergenic |
| CTTGATCAAAGGATCATCAG+AGG | 0.667213 | 4.3:-4219676 | None:intergenic |
| ATCCTGTTCTACCACATCTG+GGG | 0.668216 | 4.3:-4217532 | None:intergenic |
| CAAGAGAAAATAAGAAACTG+GGG | 0.669093 | 4.3:-4217149 | None:intergenic |
| TGTTGCTGAGAAGGCCTGTG+GGG | 0.670031 | 4.3:+4218460 | MS.gene55831:CDS |
| GATCGGCAGAATGAGTTACA+GGG | 0.670106 | 4.3:+4218752 | MS.gene55831:CDS |
| AGATCAAGATCAGGACGAAG+GGG | 0.673526 | 4.3:+4218046 | MS.gene55831:CDS |
| TCGCCCAAGAGTCCATGCAG+TGG | 0.699413 | 4.3:-4218330 | None:intergenic |
| GTAACTCACAGAGAGGACAC+CGG | 0.704952 | 4.3:+4218578 | MS.gene55831:CDS |
| TTTAAGAAATGGAATCCTCG+AGG | 0.714463 | 4.3:+4219324 | MS.gene55831:CDS |
| AGCATTCAAAAGCTGCACGT+CGG | 0.714957 | 4.3:-4217749 | None:intergenic |
| AAGCTCTGAATGAAGTAGTG+AGG | 0.725661 | 4.3:+4218630 | MS.gene55831:CDS |
| AACCAGTTGAGCGACCATTG+GGG | 0.734111 | 4.3:-4218672 | None:intergenic |
| AAGTGGCACAAGTTTCTCAG+GGG | 0.744442 | 4.3:-4218240 | None:intergenic |
| TCTCACTGTAACTCACAGAG+AGG | 0.768022 | 4.3:+4218571 | MS.gene55831:CDS |
| AGATACCTGAGTATGCCTCG+AGG | 0.782208 | 4.3:-4219339 | None:intergenic |
| AGGCATTGTACAATGCACTG+GGG | 0.801386 | 4.3:+4217637 | MS.gene55831:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAATCAACAAAAA+GGG | - | chr4.3:4216878-4216897 | None:intergenic | 10.0% |
| !! | TAATTAAAAAAAAAAAAAGC+AGG | - | chr4.3:4216685-4216704 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAATCAACAAAA+AGG | - | chr4.3:4216879-4216898 | None:intergenic | 10.0% |
| !! | AAAAAAAAATCAACAAAAAG+GGG | - | chr4.3:4216877-4216896 | None:intergenic | 15.0% |
| !! | AATTATCATTCTTATTGAAA+TGG | + | chr4.3:4216449-4216468 | MS.gene55831:intron | 15.0% |
| !! | ATTGATATAATAGAAGAATA+TGG | + | chr4.3:4217918-4217937 | MS.gene55831:CDS | 15.0% |
| !!! | ATTGGTTTTATATTCAAATT+GGG | + | chr4.3:4216507-4216526 | MS.gene55831:intron | 15.0% |
| !! | AAAAAAAATCAACAAAAAGG+GGG | - | chr4.3:4216876-4216895 | None:intergenic | 20.0% |
| !! | AGAACAAATAGCATAAATAA+AGG | - | chr4.3:4217008-4217027 | None:intergenic | 20.0% |
| !! | AGAATATAACTAAACAAGAT+TGG | + | chr4.3:4218165-4218184 | MS.gene55831:CDS | 20.0% |
| !! | GAACAAATAGCATAAATAAA+GGG | - | chr4.3:4217007-4217026 | None:intergenic | 20.0% |
| !! | GTTATATTCTCTTCAATAAA+TGG | - | chr4.3:4218155-4218174 | None:intergenic | 20.0% |
| !! | TGCTTTATAAAATAAAAGCA+GGG | - | chr4.3:4217972-4217991 | None:intergenic | 20.0% |
| !! | TTCTACATATTATGAAAAGT+TGG | + | chr4.3:4217785-4217804 | MS.gene55831:CDS | 20.0% |
| !! | TTTATATCTTGAATCATTTG+TGG | + | chr4.3:4216724-4216743 | MS.gene55831:intron | 20.0% |
| !!! | AAATTAAAGCATTATTGTTG+AGG | + | chr4.3:4217319-4217338 | MS.gene55831:CDS | 20.0% |
| !!! | CATTGGTTTTATATTCAAAT+TGG | + | chr4.3:4216506-4216525 | MS.gene55831:intron | 20.0% |
| !!! | TTGCATCAATTGTTTTTTTA+GGG | + | chr4.3:4219530-4219549 | MS.gene55831:intron | 20.0% |
| !!! | TTGGTTTTATATTCAAATTG+GGG | + | chr4.3:4216508-4216527 | MS.gene55831:intron | 20.0% |
| !!! | TTTGCATCAATTGTTTTTTT+AGG | + | chr4.3:4219529-4219548 | MS.gene55831:intron | 20.0% |
| ! | ATATAACTAAACAAGATTGG+AGG | + | chr4.3:4218168-4218187 | MS.gene55831:CDS | 25.0% |
| ! | ATGATTAATGTTGGTCAAAT+TGG | + | chr4.3:4216534-4216553 | MS.gene55831:intron | 25.0% |
| ! | CTGCTTTATAAAATAAAAGC+AGG | - | chr4.3:4217973-4217992 | None:intergenic | 25.0% |
| ! | GATATAATAGAAGAATATGG+TGG | + | chr4.3:4217921-4217940 | MS.gene55831:CDS | 25.0% |
| ! | GTTTATTGTTGAGATATCAT+TGG | + | chr4.3:4216489-4216508 | MS.gene55831:intron | 25.0% |
| ! | TGATTAATGTTGGTCAAATT+GGG | + | chr4.3:4216535-4216554 | MS.gene55831:intron | 25.0% |
| !! | AATACATGCAAGAATTTTAC+AGG | + | chr4.3:4218972-4218991 | MS.gene55831:CDS | 25.0% |
| !! | AGATAGAATTTGTTCAAAGA+TGG | + | chr4.3:4217268-4217287 | MS.gene55831:CDS | 25.0% |
| !! | CTATTTGTTCTGTATGTTTT+AGG | + | chr4.3:4217017-4217036 | MS.gene55831:intron | 25.0% |
| !! | TACACAAACACTTTAAGAAA+TGG | + | chr4.3:4219313-4219332 | MS.gene55831:CDS | 25.0% |
| !!! | CTGCTTTTATTTTATAAAGC+AGG | + | chr4.3:4217971-4217990 | MS.gene55831:CDS | 25.0% |
| AATAACATGGGAACAAGAAA+TGG | - | chr4.3:4218002-4218021 | None:intergenic | 30.0% | |
| ACTAGCAACATAAACATGTT+AGG | - | chr4.3:4216958-4216977 | None:intergenic | 30.0% | |
| AGCAAGAGAAAATAAGAAAC+TGG | - | chr4.3:4217154-4217173 | None:intergenic | 30.0% | |
| ATTAATTCTCAAGAATGCTC+TGG | + | chr4.3:4217224-4217243 | MS.gene55831:CDS | 30.0% | |
| ATTTCTTGTTCCCATGTTAT+TGG | + | chr4.3:4218001-4218020 | MS.gene55831:CDS | 30.0% | |
| CAAGAGAAAATAAGAAACTG+GGG | - | chr4.3:4217152-4217171 | None:intergenic | 30.0% | |
| CAAGTCATTATTCAGAAGTT+AGG | + | chr4.3:4218794-4218813 | MS.gene55831:CDS | 30.0% | |
| CAGAAGAAAACAATGATGTT+AGG | + | chr4.3:4217601-4217620 | MS.gene55831:CDS | 30.0% | |
| CAGTATGCTGATCAAATTAT+GGG | + | chr4.3:4218848-4218867 | MS.gene55831:CDS | 30.0% | |
| GATTAATGTTGGTCAAATTG+GGG | + | chr4.3:4216536-4216555 | MS.gene55831:intron | 30.0% | |
| GCAAGAGAAAATAAGAAACT+GGG | - | chr4.3:4217153-4217172 | None:intergenic | 30.0% | |
| TCACCAAAGCATGAAAAAAT+CGG | - | chr4.3:4219175-4219194 | None:intergenic | 30.0% | |
| TGAACAATTTCCTGAAAGAA+GGG | - | chr4.3:4218545-4218564 | None:intergenic | 30.0% | |
| TGCATTAAATGATGTTTCGT+TGG | - | chr4.3:4218830-4218849 | None:intergenic | 30.0% | |
| TTGGGGTTTATGATTAATGT+TGG | + | chr4.3:4216525-4216544 | MS.gene55831:intron | 30.0% | |
| ! | ATTTTACAGGTATATGGAGA+TGG | + | chr4.3:4218985-4219004 | MS.gene55831:CDS | 30.0% |
| ! | GCAAGAATTTTACAGGTATA+TGG | + | chr4.3:4218979-4218998 | MS.gene55831:CDS | 30.0% |
| ! | GGCAAATTTTTCCAATGATA+TGG | + | chr4.3:4217668-4217687 | MS.gene55831:CDS | 30.0% |
| ! | TGAGTGATGTTGGTAAAATT+GGG | + | chr4.3:4216619-4216638 | MS.gene55831:intron | 30.0% |
| ! | TGTGTGTATTTTCCTGTTAT+GGG | + | chr4.3:4216819-4216838 | MS.gene55831:intron | 30.0% |
| ! | TTGAGTGATGTTGGTAAAAT+TGG | + | chr4.3:4216618-4216637 | MS.gene55831:intron | 30.0% |
| ! | TTTTACAGGTATATGGAGAT+GGG | + | chr4.3:4218986-4219005 | MS.gene55831:CDS | 30.0% |
| !! | ATGCGTTTAAGTTGTAGTTT+GGG | + | chr4.3:4216908-4216927 | MS.gene55831:intron | 30.0% |
| !! | CACTAATAATGGGTAATACA+AGG | - | chr4.3:4216789-4216808 | None:intergenic | 30.0% |
| !! | TATGCGTTTAAGTTGTAGTT+TGG | + | chr4.3:4216907-4216926 | MS.gene55831:intron | 30.0% |
| !!! | AGTTTCTTATTTTCTCTTGC+TGG | + | chr4.3:4217153-4217172 | MS.gene55831:CDS | 30.0% |
| !!! | ATGATTGGTTTTGGTCTAAT+TGG | + | chr4.3:4216376-4216395 | MS.gene55831:CDS | 30.0% |
| !!! | CTGTATGTTTTAGGTTAAGA+TGG | + | chr4.3:4217026-4217045 | MS.gene55831:intron | 30.0% |
| !!! | TGATTGGTTTTGGTCTAATT+GGG | + | chr4.3:4216377-4216396 | MS.gene55831:CDS | 30.0% |
| ACAACCCATATTCACAAACA+AGG | - | chr4.3:4216846-4216865 | None:intergenic | 35.0% | |
| ACAAGAAGAAGATCAAGATC+AGG | + | chr4.3:4218037-4218056 | MS.gene55831:CDS | 35.0% | |
| CTGAACAATTTCCTGAAAGA+AGG | - | chr4.3:4218546-4218565 | None:intergenic | 35.0% | |
| GAACATCTTTCATACTCTGA+AGG | - | chr4.3:4218436-4218455 | None:intergenic | 35.0% | |
| GCAGTATGCTGATCAAATTA+TGG | + | chr4.3:4218847-4218866 | MS.gene55831:CDS | 35.0% | |
| GGACAGTTTGTATAATGAGA+AGG | + | chr4.3:4219432-4219451 | MS.gene55831:CDS | 35.0% | |
| GGAGATTTAGCTGATACATT+GGG | + | chr4.3:4219588-4219607 | MS.gene55831:CDS | 35.0% | |
| GTATTTAAGAAACTCAGTGC+CGG | - | chr4.3:4218957-4218976 | None:intergenic | 35.0% | |
| GTCATTATCCCATCACAATA+AGG | - | chr4.3:4219100-4219119 | None:intergenic | 35.0% | |
| GTCTAATTGGGGTTTATGAT+TGG | + | chr4.3:4216389-4216408 | MS.gene55831:CDS | 35.0% | |
| TAAACAAGATTGGAGGCAAA+GGG | + | chr4.3:4218175-4218194 | MS.gene55831:CDS | 35.0% | |
| TGGAGATTTAGCTGATACAT+TGG | + | chr4.3:4219587-4219606 | MS.gene55831:CDS | 35.0% | |
| TGTCCTTCACATGATTGTTT+GGG | - | chr4.3:4218310-4218329 | None:intergenic | 35.0% | |
| TTGGTCAAATTGGGGTTTAT+GGG | + | chr4.3:4216414-4216433 | MS.gene55831:CDS | 35.0% | |
| TTTAAGAAATGGAATCCTCG+AGG | + | chr4.3:4219324-4219343 | MS.gene55831:CDS | 35.0% | |
| ! | AAGTACTGCCTTATTGTGAT+GGG | + | chr4.3:4219089-4219108 | MS.gene55831:CDS | 35.0% |
| ! | AGAATTTGTTCAAAGATGGC+TGG | + | chr4.3:4217272-4217291 | MS.gene55831:CDS | 35.0% |
| ! | ATTTTCTCTTGCTGGAGAAT+TGG | + | chr4.3:4217161-4217180 | MS.gene55831:CDS | 35.0% |
| ! | CACTTCAGGCAATTGAATTT+TGG | + | chr4.3:4217874-4217893 | MS.gene55831:CDS | 35.0% |
| ! | CAGTTTCCTTGATTGATGAT+GGG | - | chr4.3:4218392-4218411 | None:intergenic | 35.0% |
| ! | GAGTGATGTTGGTAAAATTG+GGG | + | chr4.3:4216620-4216639 | MS.gene55831:intron | 35.0% |
| ! | GTGTGTGTATTTTCCTGTTA+TGG | + | chr4.3:4216818-4216837 | MS.gene55831:intron | 35.0% |
| ! | TAATGGGTAATACAAGGACA+CGG | - | chr4.3:4216783-4216802 | None:intergenic | 35.0% |
| !! | AAAGTACTGCCTTATTGTGA+TGG | + | chr4.3:4219088-4219107 | MS.gene55831:CDS | 35.0% |
| !! | AGTTTCCTTGATTGATGATG+GGG | - | chr4.3:4218391-4218410 | None:intergenic | 35.0% |
| !! | ATGATTGGTGTTGGTCAAAT+TGG | + | chr4.3:4216404-4216423 | MS.gene55831:CDS | 35.0% |
| !! | TGATTGGTGTTGGTCAAATT+GGG | + | chr4.3:4216405-4216424 | MS.gene55831:CDS | 35.0% |
| !!! | GATTGGTTTTGGTCTAATTG+GGG | + | chr4.3:4216378-4216397 | MS.gene55831:CDS | 35.0% |
| AAAGTTCTCTCCAATTGCCA+AGG | - | chr4.3:4219203-4219222 | None:intergenic | 40.0% | |
| AAGAGAGATCCTATCAACTC+AGG | - | chr4.3:4217435-4217454 | None:intergenic | 40.0% | |
| AAGATCAAGATCAGGACGAA+GGG | + | chr4.3:4218045-4218064 | MS.gene55831:CDS | 40.0% | |
| ACTGGTTACTGTCATCATGA+TGG | + | chr4.3:4218688-4218707 | MS.gene55831:CDS | 40.0% | |
| AGAAGGTCTCATCTGATGAT+CGG | + | chr4.3:4218735-4218754 | MS.gene55831:CDS | 40.0% | |
| AGACAACTTGAAGCAATTCC+AGG | + | chr4.3:4217116-4217135 | MS.gene55831:CDS | 40.0% | |
| AGCAGTGTCTCCAATAACAT+GGG | - | chr4.3:4218014-4218033 | None:intergenic | 40.0% | |
| ATACTCACTGCAGTTGTTCA+GGG | + | chr4.3:4217567-4217586 | MS.gene55831:CDS | 40.0% | |
| ATGGGTGATCTTGGTCAAAT+TGG | + | chr4.3:4216562-4216581 | MS.gene55831:intron | 40.0% | |
| ATTTGCTTCTCGAAGTGCAA+CGG | + | chr4.3:4218886-4218905 | MS.gene55831:CDS | 40.0% | |
| CAAGTTGTAGCAAAAGTAGC+TGG | + | chr4.3:4217384-4217403 | MS.gene55831:CDS | 40.0% | |
| CAGGAAGTCTTTGCTAGATA+CGG | - | chr4.3:4219643-4219662 | None:intergenic | 40.0% | |
| CCAAAGCATGAAAAAATCGG+AGG | - | chr4.3:4219172-4219191 | None:intergenic | 40.0% | |
| CTAAACAAGATTGGAGGCAA+AGG | + | chr4.3:4218174-4218193 | MS.gene55831:CDS | 40.0% | |
| CTCAAAGCCATATTCACAAG+TGG | - | chr4.3:4218260-4218279 | None:intergenic | 40.0% | |
| CTCTGATGATCCTTTGATCA+AGG | + | chr4.3:4219677-4219696 | MS.gene55831:CDS | 40.0% | |
| CTTGATCAAAGGATCATCAG+AGG | - | chr4.3:4219679-4219698 | None:intergenic | 40.0% | |
| CTTGGTCAAATTGGGGTTTA+TGG | + | chr4.3:4216571-4216590 | MS.gene55831:intron | 40.0% | |
| GATAATGACCCAACTCCTTA+AGG | + | chr4.3:4219111-4219130 | MS.gene55831:CDS | 40.0% | |
| GATCAAGGAATCTGCAGAAT+GGG | + | chr4.3:4219692-4219711 | MS.gene55831:CDS | 40.0% | |
| GATTGCTGGACAAATCCTTA+AGG | - | chr4.3:4219129-4219148 | None:intergenic | 40.0% | |
| GCAGTTTCCTTGATTGATGA+TGG | - | chr4.3:4218393-4218412 | None:intergenic | 40.0% | |
| GGACAAATCCTTAAGGAGTT+GGG | - | chr4.3:4219122-4219141 | None:intergenic | 40.0% | |
| GGTATCTTGCAAGGTTTCAA+AGG | + | chr4.3:4219355-4219374 | MS.gene55831:CDS | 40.0% | |
| GTCAAATTGGGGTTTATCAG+TGG | + | chr4.3:4216417-4216436 | MS.gene55831:CDS | 40.0% | |
| GTGTCCTTCACATGATTGTT+TGG | - | chr4.3:4218311-4218330 | None:intergenic | 40.0% | |
| GTTGGTCAAATTGGGGTTTA+TGG | + | chr4.3:4216413-4216432 | MS.gene55831:CDS | 40.0% | |
| TAATACAAGGACACGGAACA+GGG | - | chr4.3:4216776-4216795 | None:intergenic | 40.0% | |
| TAATGATGATACTGCCCCAA+TGG | + | chr4.3:4218658-4218677 | MS.gene55831:CDS | 40.0% | |
| TAGCAGTGTCTCCAATAACA+TGG | - | chr4.3:4218015-4218034 | None:intergenic | 40.0% | |
| TCAATAAATGGCATGACCAG+CGG | - | chr4.3:4218143-4218162 | None:intergenic | 40.0% | |
| TCTGCAGATTCCTTGATCAA+AGG | - | chr4.3:4219690-4219709 | None:intergenic | 40.0% | |
| TGATCAAGGAATCTGCAGAA+TGG | + | chr4.3:4219691-4219710 | MS.gene55831:CDS | 40.0% | |
| TGCATTGTACAATGCCTGTA+TGG | - | chr4.3:4217634-4217653 | None:intergenic | 40.0% | |
| TGGACAAATCCTTAAGGAGT+TGG | - | chr4.3:4219123-4219142 | None:intergenic | 40.0% | |
| TGGGTGATCTTGGTCAAATT+GGG | + | chr4.3:4216563-4216582 | MS.gene55831:intron | 40.0% | |
| TGTTCCAAATGTTGCTGAGA+AGG | + | chr4.3:4218451-4218470 | MS.gene55831:CDS | 40.0% | |
| TGTTGTAGGTGATGTATGCA+GGG | + | chr4.3:4219054-4219073 | MS.gene55831:CDS | 40.0% | |
| TTGGGGTTTATGATTGGTGT+TGG | + | chr4.3:4216395-4216414 | MS.gene55831:CDS | 40.0% | |
| ! | AGATACGGATTGCTGAATCA+AGG | - | chr4.3:4219628-4219647 | None:intergenic | 40.0% |
| ! | ATACGGATTGCTGAATCAAG+GGG | - | chr4.3:4219626-4219645 | None:intergenic | 40.0% |
| ! | CATGCTAAATGCACTGACAA+AGG | + | chr4.3:4218283-4218302 | MS.gene55831:CDS | 40.0% |
| ! | CCTGGTAGTCCTCAAAATTT+TGG | - | chr4.3:4219015-4219034 | None:intergenic | 40.0% |
| ! | GAATATGGTGGTGAGTTTAG+CGG | + | chr4.3:4217933-4217952 | MS.gene55831:CDS | 40.0% |
| ! | GATACGGATTGCTGAATCAA+GGG | - | chr4.3:4219627-4219646 | None:intergenic | 40.0% |
| ! | GATGGGTCTCCAAAATTTTG+AGG | + | chr4.3:4219003-4219022 | MS.gene55831:CDS | 40.0% |
| ! | GGGTCCTTGTTTGTGAATAT+GGG | + | chr4.3:4216839-4216858 | MS.gene55831:intron | 40.0% |
| ! | TGGGTCCTTGTTTGTGAATA+TGG | + | chr4.3:4216838-4216857 | MS.gene55831:intron | 40.0% |
| !! | AAGCTCTGAATGAAGTAGTG+AGG | + | chr4.3:4218630-4218649 | MS.gene55831:CDS | 40.0% |
| !! | ACTTGTGCCACTTGTGAATA+TGG | + | chr4.3:4218250-4218269 | MS.gene55831:CDS | 40.0% |
| !! | ATGATGTTTCGTTGGTTCAG+AGG | - | chr4.3:4218822-4218841 | None:intergenic | 40.0% |
| !! | CCAAAATTTTGAGGACTACC+AGG | + | chr4.3:4219012-4219031 | MS.gene55831:CDS | 40.0% |
| !! | CGAATGTTCGAGTTTTTGCA+CGG | + | chr4.3:4218350-4218369 | MS.gene55831:CDS | 40.0% |
| !! | GATTGGTGTTGGTCAAATTG+GGG | + | chr4.3:4216406-4216425 | MS.gene55831:CDS | 40.0% |
| !! | GTTTCCTTGATTGATGATGG+GGG | - | chr4.3:4218390-4218409 | None:intergenic | 40.0% |
| !! | TTACGCATTTGGCTCCATTT+TGG | + | chr4.3:4218208-4218227 | MS.gene55831:CDS | 40.0% |
| !! | TTGGGGATTTTGAGTGATGT+TGG | + | chr4.3:4216609-4216628 | MS.gene55831:intron | 40.0% |
| !!! | CCTCCGATTTTTTCATGCTT+TGG | + | chr4.3:4219169-4219188 | MS.gene55831:CDS | 40.0% |
| !!! | GTTTTAGGTTAAGATGGCCA+TGG | + | chr4.3:4217032-4217051 | MS.gene55831:intron | 40.0% |
| AAAGAAGGGAGTCAATGGAG+AGG | - | chr4.3:4218531-4218550 | None:intergenic | 45.0% | |
| AAGTGGCACAAGTTTCTCAG+GGG | - | chr4.3:4218243-4218262 | None:intergenic | 45.0% | |
| AATACAAGGACACGGAACAG+GGG | - | chr4.3:4216775-4216794 | None:intergenic | 45.0% | |
| ACAAGTGGCACAAGTTTCTC+AGG | - | chr4.3:4218245-4218264 | None:intergenic | 45.0% | |
| ACACACGCACGCACTAATAA+TGG | - | chr4.3:4216800-4216819 | None:intergenic | 45.0% | |
| AGACCTATGCAACTGATTGC+TGG | - | chr4.3:4219143-4219162 | None:intergenic | 45.0% | |
| AGATCAAGATCAGGACGAAG+GGG | + | chr4.3:4218046-4218065 | MS.gene55831:CDS | 45.0% | |
| AGCATTCAAAAGCTGCACGT+CGG | - | chr4.3:4217752-4217771 | None:intergenic | 45.0% | |
| AGCTCTCTGCCCATACTAAT+GGG | + | chr4.3:4219269-4219288 | MS.gene55831:CDS | 45.0% | |
| ATCCAGCATCCTCATAACCT+TGG | - | chr4.3:4218502-4218521 | None:intergenic | 45.0% | |
| ATCCTGTTCTACCACATCTG+GGG | - | chr4.3:4217535-4217554 | None:intergenic | 45.0% | |
| ATCGTCAGCCCCATTAGTAT+GGG | - | chr4.3:4219281-4219300 | None:intergenic | 45.0% | |
| CAAGTGGCACAAGTTTCTCA+GGG | - | chr4.3:4218244-4218263 | None:intergenic | 45.0% | |
| CACAAACAAGGACCCATAAC+AGG | - | chr4.3:4216834-4216853 | None:intergenic | 45.0% | |
| CACACGCACGCACTAATAAT+GGG | - | chr4.3:4216799-4216818 | None:intergenic | 45.0% | |
| CAGAGGATAAGCACTCTTTC+AGG | - | chr4.3:4219662-4219681 | None:intergenic | 45.0% | |
| CAGGATCTGTGTAACTTCCA+TGG | - | chr4.3:4217052-4217071 | None:intergenic | 45.0% | |
| CCAGACTCTTGAGAATCAGA+AGG | + | chr4.3:4218718-4218737 | MS.gene55831:CDS | 45.0% | |
| CCTTCTGATTCTCAAGAGTC+TGG | - | chr4.3:4218721-4218740 | None:intergenic | 45.0% | |
| CTACCAGGTTTGTGCTATCA+CGG | + | chr4.3:4219027-4219046 | MS.gene55831:CDS | 45.0% | |
| CTTCAGTTCAGGAGAAAGAG+TGG | - | chr4.3:4217727-4217746 | None:intergenic | 45.0% | |
| CTTCATATGCTGCTGTTCTG+AGG | - | chr4.3:4218613-4218632 | None:intergenic | 45.0% | |
| CTTGCAAGCAACCACATAGA+AGG | - | chr4.3:4218778-4218797 | None:intergenic | 45.0% | |
| GAAGATCAAGATCAGGACGA+AGG | + | chr4.3:4218044-4218063 | MS.gene55831:CDS | 45.0% | |
| GAAGCTGCAACTTACGCATT+TGG | + | chr4.3:4218197-4218216 | MS.gene55831:CDS | 45.0% | |
| GATACTCACTGCAGTTGTTC+AGG | + | chr4.3:4217566-4217585 | MS.gene55831:CDS | 45.0% | |
| GATCCTGTTCTACCACATCT+GGG | - | chr4.3:4217536-4217555 | None:intergenic | 45.0% | |
| GATCGGCAGAATGAGTTACA+GGG | + | chr4.3:4218752-4218771 | MS.gene55831:CDS | 45.0% | |
| GCATACTCAGGTATCTTGCA+AGG | + | chr4.3:4219346-4219365 | MS.gene55831:CDS | 45.0% | |
| GGACCCAAACAATCATGTGA+AGG | + | chr4.3:4218304-4218323 | MS.gene55831:CDS | 45.0% | |
| GGAGCACAGTAATGATCTGT+TGG | - | chr4.3:4218415-4218434 | None:intergenic | 45.0% | |
| GGGTGATCTTGGTCAAATTG+GGG | + | chr4.3:4216564-4216583 | MS.gene55831:intron | 45.0% | |
| GTAATACAAGGACACGGAAC+AGG | - | chr4.3:4216777-4216796 | None:intergenic | 45.0% | |
| GTAGTCACGCTCCATATCAT+TGG | - | chr4.3:4217682-4217701 | None:intergenic | 45.0% | |
| GTCAAATTGGGGTTTATGGG+TGG | + | chr4.3:4216547-4216566 | MS.gene55831:intron | 45.0% | |
| GTGTTGTAGGTGATGTATGC+AGG | + | chr4.3:4219053-4219072 | MS.gene55831:CDS | 45.0% | |
| GTTATGAGGATGCTGGATCT+GGG | + | chr4.3:4218504-4218523 | MS.gene55831:CDS | 45.0% | |
| GTTGTGACCAAGACAGCAAT+TGG | + | chr4.3:4219558-4219577 | MS.gene55831:CDS | 45.0% | |
| TAACCAGTTGAGCGACCATT+GGG | - | chr4.3:4218676-4218695 | None:intergenic | 45.0% | |
| TCAATTGCCTGAAGTGCAAC+AGG | - | chr4.3:4217870-4217889 | None:intergenic | 45.0% | |
| TCCAAGAATTGCAGTACGTG+TGG | - | chr4.3:4219415-4219434 | None:intergenic | 45.0% | |
| TCCACACGTACTGCAATTCT+TGG | + | chr4.3:4219411-4219430 | MS.gene55831:CDS | 45.0% | |
| TCCAGCATCCTCATAACCTT+GGG | - | chr4.3:4218501-4218520 | None:intergenic | 45.0% | |
| TCCTGAAAGAAGGGAGTCAA+TGG | - | chr4.3:4218536-4218555 | None:intergenic | 45.0% | |
| TCTCACTGTAACTCACAGAG+AGG | + | chr4.3:4218571-4218590 | MS.gene55831:CDS | 45.0% | |
| TGAAGAAGTTTCCCCAGATG+TGG | + | chr4.3:4217521-4217540 | MS.gene55831:CDS | 45.0% | |
| TGATCCTGTTCTACCACATC+TGG | - | chr4.3:4217537-4217556 | None:intergenic | 45.0% | |
| TGATCGGCAGAATGAGTTAC+AGG | + | chr4.3:4218751-4218770 | MS.gene55831:CDS | 45.0% | |
| TGTCCAGCAATCAGTTGCAT+AGG | + | chr4.3:4219137-4219156 | MS.gene55831:CDS | 45.0% | |
| TTAAATGCCCAAGCAGTGGA+TGG | + | chr4.3:4217072-4217091 | MS.gene55831:CDS | 45.0% | |
| TTCATCTTCCCTCACAGCTT+TGG | - | chr4.3:4217844-4217863 | None:intergenic | 45.0% | |
| TTGGGGTTTATGGGTGATCT+TGG | + | chr4.3:4216553-4216572 | MS.gene55831:intron | 45.0% | |
| ! | ACAGGCATTGTACAATGCAC+TGG | + | chr4.3:4217635-4217654 | MS.gene55831:CDS | 45.0% |
| ! | ACGTGCAGCTTTTGAATGCT+TGG | + | chr4.3:4217752-4217771 | MS.gene55831:CDS | 45.0% |
| ! | AGGCATTGTACAATGCACTG+GGG | + | chr4.3:4217637-4217656 | MS.gene55831:CDS | 45.0% |
| ! | ATGCTTTGGTGACATTGCCT+TGG | + | chr4.3:4219183-4219202 | MS.gene55831:CDS | 45.0% |
| ! | CAGGCATTGTACAATGCACT+GGG | + | chr4.3:4217636-4217655 | MS.gene55831:CDS | 45.0% |
| ! | TGTTCAAAGATGGCTGGCTA+TGG | + | chr4.3:4217278-4217297 | MS.gene55831:CDS | 45.0% |
| ! | TTGAGTTGCCACACAAGCAA+TGG | + | chr4.3:4217409-4217428 | MS.gene55831:CDS | 45.0% |
| !! | AAGCAATGGCCTGAGTTGAT+AGG | + | chr4.3:4217423-4217442 | MS.gene55831:CDS | 45.0% |
| !! | ATGGGTGGTGTTGGTCAAAT+TGG | + | chr4.3:4216590-4216609 | MS.gene55831:intron | 45.0% |
| !! | GCATTTGGCTCCATTTTGGA+AGG | + | chr4.3:4218212-4218231 | MS.gene55831:CDS | 45.0% |
| !! | TCCATTGACTCCCTTCTTTC+AGG | + | chr4.3:4218532-4218551 | MS.gene55831:CDS | 45.0% |
| !! | TGGGTGGTGTTGGTCAAATT+GGG | + | chr4.3:4216591-4216610 | MS.gene55831:intron | 45.0% |
| AACCAGTTGAGCGACCATTG+GGG | - | chr4.3:4218675-4218694 | None:intergenic | 50.0% | |
| AACTCAGGCCATTGCTTGTG+TGG | - | chr4.3:4217420-4217439 | None:intergenic | 50.0% | |
| AAGACAGCAATTGGCGTGCT+TGG | + | chr4.3:4219567-4219586 | MS.gene55831:CDS | 50.0% | |
| AAGCACGCCAATTGCTGTCT+TGG | - | chr4.3:4219568-4219587 | None:intergenic | 50.0% | |
| AAGCAGTGGATGGAGCTGTA+AGG | + | chr4.3:4217082-4217101 | MS.gene55831:CDS | 50.0% | |
| AAGTGCAACGGCTCATGAAG+AGG | + | chr4.3:4218898-4218917 | MS.gene55831:CDS | 50.0% | |
| AATGTTGCTGAGAAGGCCTG+TGG | + | chr4.3:4218458-4218477 | MS.gene55831:CDS | 50.0% | |
| ACACCACTGCATGGACTCTT+GGG | + | chr4.3:4218327-4218346 | MS.gene55831:CDS | 50.0% | |
| AGATACCTGAGTATGCCTCG+AGG | - | chr4.3:4219342-4219361 | None:intergenic | 50.0% | |
| AGGGGATGGACCTTCCAAAA+TGG | - | chr4.3:4218225-4218244 | None:intergenic | 50.0% | |
| AGGTGATGTATGCAGGGCTT+TGG | + | chr4.3:4219060-4219079 | MS.gene55831:CDS | 50.0% | |
| ATCTGCAGAATGGGCCAAGT+TGG | + | chr4.3:4219701-4219720 | MS.gene55831:CDS | 50.0% | |
| ATGTGAAGGACACCACTGCA+TGG | + | chr4.3:4218318-4218337 | MS.gene55831:CDS | 50.0% | |
| ATGTTGCTGAGAAGGCCTGT+GGG | + | chr4.3:4218459-4218478 | MS.gene55831:CDS | 50.0% | |
| CAAGCAACTCTCGAGACACT+TGG | + | chr4.3:4217489-4217508 | MS.gene55831:CDS | 50.0% | |
| CAGGCCTTCTCAGCAACATT+TGG | - | chr4.3:4218458-4218477 | None:intergenic | 50.0% | |
| CAGGTTTGTGCTATCACGGT+GGG | + | chr4.3:4219031-4219050 | MS.gene55831:CDS | 50.0% | |
| CATCACTGCCAAAGCTGTGA+GGG | + | chr4.3:4217833-4217852 | MS.gene55831:CDS | 50.0% | |
| CATCAGGAGCTGTGTCTTTG+GGG | - | chr4.3:4219383-4219402 | None:intergenic | 50.0% | |
| CATCGTCAGCCCCATTAGTA+TGG | - | chr4.3:4219282-4219301 | None:intergenic | 50.0% | |
| CCACTGCTTGGGCATTTAAC+AGG | - | chr4.3:4217071-4217090 | None:intergenic | 50.0% | |
| CCATCAGGAGCTGTGTCTTT+GGG | - | chr4.3:4219384-4219403 | None:intergenic | 50.0% | |
| CCTGTTAAATGCCCAAGCAG+TGG | + | chr4.3:4217068-4217087 | MS.gene55831:CDS | 50.0% | |
| GAAGAGGCAATGCTTGCCAT+TGG | + | chr4.3:4218914-4218933 | MS.gene55831:CDS | 50.0% | |
| GACACCCCCATCATCAATCA+AGG | + | chr4.3:4218383-4218402 | MS.gene55831:CDS | 50.0% | |
| GAGCTCTCTGCCCATACTAA+TGG | + | chr4.3:4219268-4219287 | MS.gene55831:CDS | 50.0% | |
| GAGGAAATAAAGAGCCCCAC+AGG | - | chr4.3:4218477-4218496 | None:intergenic | 50.0% | |
| GAGTTACAGGGCCTTCTATG+TGG | + | chr4.3:4218764-4218783 | MS.gene55831:CDS | 50.0% | |
| GATACATTGGGTAGTGCTGC+TGG | + | chr4.3:4219600-4219619 | MS.gene55831:CDS | 50.0% | |
| GATGCAGTTGATCGAGCATC+AGG | - | chr4.3:4217363-4217382 | None:intergenic | 50.0% | |
| GCTCTCTGCCCATACTAATG+GGG | + | chr4.3:4219270-4219289 | MS.gene55831:CDS | 50.0% | |
| GGTGACATTGCCTTGGCAAT+TGG | + | chr4.3:4219190-4219209 | MS.gene55831:CDS | 50.0% | |
| GGTTATGAGGATGCTGGATC+TGG | + | chr4.3:4218503-4218522 | MS.gene55831:CDS | 50.0% | |
| GTAACCAGTTGAGCGACCAT+TGG | - | chr4.3:4218677-4218696 | None:intergenic | 50.0% | |
| GTAACTCACAGAGAGGACAC+CGG | + | chr4.3:4218578-4218597 | MS.gene55831:CDS | 50.0% | |
| GTTGATCGAGCATCAGGAGA+TGG | - | chr4.3:4217357-4217376 | None:intergenic | 50.0% | |
| TACAGCTCCATCCACTGCTT+GGG | - | chr4.3:4217082-4217101 | None:intergenic | 50.0% | |
| TGAAGAGCCTGTTGCACTTC+AGG | + | chr4.3:4217860-4217879 | MS.gene55831:CDS | 50.0% | |
| TTACAGCTCCATCCACTGCT+TGG | - | chr4.3:4217083-4217102 | None:intergenic | 50.0% | |
| TTCCCCAGATGTGGTAGAAC+AGG | + | chr4.3:4217530-4217549 | MS.gene55831:CDS | 50.0% | |
| TTGGGGTTTATGGGTGGTGT+TGG | + | chr4.3:4216581-4216600 | MS.gene55831:intron | 50.0% | |
| TTTCCTCGCCCAAGGTTATG+AGG | + | chr4.3:4218490-4218509 | MS.gene55831:CDS | 50.0% | |
| ! | AATGCTTGCCATTGGTGCCT+TGG | + | chr4.3:4218922-4218941 | MS.gene55831:CDS | 50.0% |
| ! | GCTCTTTATTTCCTCGCCCA+AGG | + | chr4.3:4218482-4218501 | MS.gene55831:CDS | 50.0% |
| ! | GTTTTTGCACGGCTCAACTC+TGG | + | chr4.3:4218361-4218380 | MS.gene55831:CDS | 50.0% |
| ! | TGATGTATGCAGGGCTTTGG+AGG | + | chr4.3:4219063-4219082 | MS.gene55831:CDS | 50.0% |
| !! | ATATGCTGCTGTTCTGAGGC+GGG | - | chr4.3:4218609-4218628 | None:intergenic | 50.0% |
| !! | CATATGCTGCTGTTCTGAGG+CGG | - | chr4.3:4218610-4218629 | None:intergenic | 50.0% |
| !! | GGATTGGTTGCACGAACAGT+TGG | + | chr4.3:4218104-4218123 | MS.gene55831:CDS | 50.0% |
| !! | GGGTGGTGTTGGTCAAATTG+GGG | + | chr4.3:4216592-4216611 | MS.gene55831:intron | 50.0% |
| !! | TGTTAGGCTTGCTGCCATAC+AGG | + | chr4.3:4217617-4217636 | MS.gene55831:CDS | 50.0% |
| AACTGGGGAGATTCTGCTCC+TGG | - | chr4.3:4217137-4217156 | None:intergenic | 55.0% | |
| AAGATCAGGACGAAGGGGCT+TGG | + | chr4.3:4218051-4218070 | MS.gene55831:CDS | 55.0% | |
| ACGAGAAGCCTCCAGAGAGT+AGG | + | chr4.3:4217190-4217209 | MS.gene55831:CDS | 55.0% | |
| AGAAGCCTCCAGAGAGTAGG+AGG | + | chr4.3:4217193-4217212 | MS.gene55831:CDS | 55.0% | |
| AGGGGCAGGAAGCTGATGAA+CGG | - | chr4.3:4217463-4217482 | None:intergenic | 55.0% | |
| AGGGGCTTGGAACATTGCCA+TGG | + | chr4.3:4218064-4218083 | MS.gene55831:CDS | 55.0% | |
| CATCCTCATAACCTTGGGCG+AGG | - | chr4.3:4218496-4218515 | None:intergenic | 55.0% | |
| CCACCGTGATAGCACAAACC+TGG | - | chr4.3:4219033-4219052 | None:intergenic | 55.0% | |
| CCAGGTTTGTGCTATCACGG+TGG | + | chr4.3:4219030-4219049 | MS.gene55831:CDS | 55.0% | |
| CCATCACTGCCAAAGCTGTG+AGG | + | chr4.3:4217832-4217851 | MS.gene55831:CDS | 55.0% | |
| CCCAAAGACACAGCTCCTGA+TGG | + | chr4.3:4219381-4219400 | MS.gene55831:CDS | 55.0% | |
| CGAGAGTTGCTTGCCTGGTA+GGG | - | chr4.3:4217482-4217501 | None:intergenic | 55.0% | |
| CGTGTGGAGCATAAGCCATC+AGG | - | chr4.3:4219399-4219418 | None:intergenic | 55.0% | |
| CTGTTCGTGCAACCAATCCC+AGG | - | chr4.3:4218103-4218122 | None:intergenic | 55.0% | |
| GACACCACTGCATGGACTCT+TGG | + | chr4.3:4218326-4218345 | MS.gene55831:CDS | 55.0% | |
| GAGAGTTGCTTGCCTGGTAG+GGG | - | chr4.3:4217481-4217500 | None:intergenic | 55.0% | |
| GCACGTCGGATCTTCAGTTC+AGG | - | chr4.3:4217738-4217757 | None:intergenic | 55.0% | |
| GCCATCAGGAGCTGTGTCTT+TGG | - | chr4.3:4219385-4219404 | None:intergenic | 55.0% | |
| GCCCAAGGTTATGAGGATGC+TGG | + | chr4.3:4218497-4218516 | MS.gene55831:CDS | 55.0% | |
| GCTTGGAACATTGCCATGGC+TGG | + | chr4.3:4218068-4218087 | MS.gene55831:CDS | 55.0% | |
| GGAATCCTCGAGGCATACTC+AGG | + | chr4.3:4219334-4219353 | MS.gene55831:CDS | 55.0% | |
| GGCACAAGTTTCTCAGGGGA+TGG | - | chr4.3:4218239-4218258 | None:intergenic | 55.0% | |
| TACTCGACCGAGTGCCAACT+TGG | - | chr4.3:4219718-4219737 | None:intergenic | 55.0% | |
| TCGAGAGTTGCTTGCCTGGT+AGG | - | chr4.3:4217483-4217502 | None:intergenic | 55.0% | |
| TGGAACATTGCCATGGCTGG+AGG | + | chr4.3:4218071-4218090 | MS.gene55831:CDS | 55.0% | |
| TGTCTCGAGAGTTGCTTGCC+TGG | - | chr4.3:4217487-4217506 | None:intergenic | 55.0% | |
| TGTTGCTGAGAAGGCCTGTG+GGG | + | chr4.3:4218460-4218479 | MS.gene55831:CDS | 55.0% | |
| ! | CAATGCACTGGGGTTTGCTC+AGG | + | chr4.3:4217647-4217666 | MS.gene55831:CDS | 55.0% |
| ! | CCTCACAGCTTTGGCAGTGA+TGG | - | chr4.3:4217835-4217854 | None:intergenic | 55.0% |
| ! | GAATGGGCCAAGTTGGCACT+CGG | + | chr4.3:4219708-4219727 | MS.gene55831:CDS | 55.0% |
| ! | GCTATCACGGTGGGTGTTGT+AGG | + | chr4.3:4219040-4219059 | MS.gene55831:CDS | 55.0% |
| ! | TGGTGATGATATCGTGCCGC+TGG | + | chr4.3:4218124-4218143 | MS.gene55831:CDS | 55.0% |
| !! | AAACTCAGTGCCGGTCGCAT+AGG | - | chr4.3:4218948-4218967 | None:intergenic | 55.0% |
| !! | ATGGCTGGAGGTACTTGCCT+GGG | + | chr4.3:4218083-4218102 | MS.gene55831:CDS | 55.0% |
| !! | TCAGCAGCACTCTGGAGCAT+AGG | - | chr4.3:4219250-4219269 | None:intergenic | 55.0% |
| !! | TGGAGGTACTTGCCTGGGAT+TGG | + | chr4.3:4218088-4218107 | MS.gene55831:CDS | 55.0% |
| ATCAGCTTCCTGCCCCTACC+AGG | + | chr4.3:4217466-4217485 | MS.gene55831:CDS | 60.0% | |
| CAGAGAGCTCAGCAGCACTC+TGG | - | chr4.3:4219258-4219277 | None:intergenic | 60.0% | |
| CAGGCAAGTACCTCCAGCCA+TGG | - | chr4.3:4218084-4218103 | None:intergenic | 60.0% | |
| CCAGAGAGTAGGAGGCTAGC+AGG | + | chr4.3:4217201-4217220 | MS.gene55831:CDS | 60.0% | |
| TCGCCCAAGAGTCCATGCAG+TGG | - | chr4.3:4218333-4218352 | None:intergenic | 60.0% | |
| TGCCCCAATGGTCGCTCAAC+TGG | + | chr4.3:4218670-4218689 | MS.gene55831:CDS | 60.0% | |
| ! | CCTGCTAGCCTCCTACTCTC+TGG | - | chr4.3:4217204-4217223 | None:intergenic | 60.0% |
| ! | CGCATAGGCCAAGGCACCAA+TGG | - | chr4.3:4218933-4218952 | None:intergenic | 60.0% |
| ! | GCTAGCCTCCTACTCTCTGG+AGG | - | chr4.3:4217201-4217220 | None:intergenic | 60.0% |
| !! | CATGGCTGGAGGTACTTGCC+TGG | + | chr4.3:4218082-4218101 | MS.gene55831:CDS | 60.0% |
| !! | TGTTCTGAGGCGGGACTCTC+CGG | - | chr4.3:4218600-4218619 | None:intergenic | 60.0% |
| GGTGCCTTGGCCTATGCGAC+CGG | + | chr4.3:4218935-4218954 | MS.gene55831:CDS | 65.0% | |
| GTTGCTTGCCTGGTAGGGGC+AGG | - | chr4.3:4217477-4217496 | None:intergenic | 65.0% | |
| !! | AGTGCCGGTCGCATAGGCCA+AGG | - | chr4.3:4218942-4218961 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 4216376 | 4219743 | 4216376 | ID=MS.gene55831 |
| chr4.3 | mRNA | 4216376 | 4219743 | 4216376 | ID=MS.gene55831.t1;Parent=MS.gene55831 |
| chr4.3 | exon | 4216376 | 4216438 | 4216376 | ID=MS.gene55831.t1.exon1;Parent=MS.gene55831.t1 |
| chr4.3 | CDS | 4216376 | 4216438 | 4216376 | ID=cds.MS.gene55831.t1;Parent=MS.gene55831.t1 |
| chr4.3 | exon | 4217039 | 4219458 | 4217039 | ID=MS.gene55831.t1.exon2;Parent=MS.gene55831.t1 |
| chr4.3 | CDS | 4217039 | 4219458 | 4217039 | ID=cds.MS.gene55831.t1;Parent=MS.gene55831.t1 |
| chr4.3 | exon | 4219551 | 4219743 | 4219551 | ID=MS.gene55831.t1.exon3;Parent=MS.gene55831.t1 |
| chr4.3 | CDS | 4219551 | 4219743 | 4219551 | ID=cds.MS.gene55831.t1;Parent=MS.gene55831.t1 |
| Gene Sequence |
| Protein sequence |
