AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56714

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56714.t1 MTR_1g007380 99.364 472 3 0 1 472 1 472 0.0 968
MS.gene56714.t1 MTR_3g110660 83.686 472 77 0 1 472 11 482 0.0 831
MS.gene56714.t1 MTR_1g105980 64.579 463 164 0 7 469 6 468 0.0 658
MS.gene56714.t1 MTR_1g106000 63.158 456 159 1 23 469 15 470 0.0 627
MS.gene56714.t1 MTR_1g105995 61.987 463 176 0 7 469 5 467 0.0 626
MS.gene56714.t1 MTR_1g105990 63.158 456 165 1 12 464 10 465 0.0 620
MS.gene56714.t1 MTR_3g110660 87.952 332 40 0 1 332 11 342 0.0 603
MS.gene56714.t1 MTR_4g073520 57.576 462 190 2 13 469 49 509 0.0 577
MS.gene56714.t1 MTR_4g073520 57.576 462 190 2 13 469 49 509 0.0 576
MS.gene56714.t1 MTR_8g094290 58.696 460 185 3 12 471 20 474 0.0 566
MS.gene56714.t1 MTR_3g088455 56.114 458 197 2 12 469 23 476 0.0 563
MS.gene56714.t1 MTR_3g088475 56.863 459 193 3 12 469 23 477 0.0 561
MS.gene56714.t1 MTR_1g029750 58.734 458 186 3 13 469 25 480 0.0 554
MS.gene56714.t1 MTR_3g096800 52.790 466 213 4 6 471 18 476 0.0 525
MS.gene56714.t1 MTR_3g096840 53.433 466 212 3 3 468 19 479 0.0 516
MS.gene56714.t1 MTR_3g096830 56.652 466 194 5 3 468 7 464 0.0 516
MS.gene56714.t1 MTR_3g110420 50.870 460 224 2 13 472 14 471 1.53e-176 503
MS.gene56714.t1 MTR_1g007270 50.441 454 216 3 16 469 26 470 5.24e-169 484
MS.gene56714.t1 MTR_3g461440 49.436 443 220 2 16 458 16 454 8.90e-169 483
MS.gene56714.t1 MTR_3g461470 48.984 443 222 2 16 458 16 454 5.25e-167 479
MS.gene56714.t1 MTR_3g061390 49.887 443 218 2 16 458 16 454 3.68e-166 476
MS.gene56714.t1 MTR_1g007180 48.465 456 231 3 17 472 6 457 3.56e-164 471
MS.gene56714.t1 MTR_3g461430 49.658 439 217 2 20 458 27 461 5.13e-163 471
MS.gene56714.t1 MTR_3g110430 52.466 446 207 4 23 468 62 502 4.83e-161 465
MS.gene56714.t1 MTR_3g461480 49.443 449 222 3 17 464 21 465 5.30e-157 453
MS.gene56714.t1 MTR_2g031750 47.289 461 237 4 13 472 2 457 8.03e-157 453
MS.gene56714.t1 MTR_3g088465 57.923 366 149 3 12 376 23 384 1.14e-156 451
MS.gene56714.t1 MTR_1g007240 46.491 456 240 3 17 472 6 457 1.18e-156 452
MS.gene56714.t1 MTR_5g096840 46.453 437 229 3 23 458 29 461 5.96e-154 446
MS.gene56714.t1 MTR_5g096850 43.182 440 245 3 23 461 25 460 3.50e-133 393
MS.gene56714.t1 MTR_3g110420 55.312 320 142 1 13 332 14 332 4.74e-130 380
MS.gene56714.t1 MTR_2g031750 44.872 390 209 4 84 472 6 390 3.58e-123 364
MS.gene56714.t1 MTR_3g461440 47.531 324 166 2 138 461 1 320 3.72e-115 342
MS.gene56714.t1 MTR_1g007180 45.928 307 162 3 166 472 71 373 2.75e-97 298
MS.gene56714.t1 MTR_5g017200 56.809 257 98 4 12 268 21 264 6.55e-93 283
MS.gene56714.t1 MTR_6g022790 31.078 473 279 12 2 466 19 452 2.31e-58 199
MS.gene56714.t1 MTR_8g080120 29.106 481 280 13 3 468 1 435 8.95e-55 189
MS.gene56714.t1 MTR_2g101920 30.805 435 261 9 4 433 26 425 6.83e-54 187
MS.gene56714.t1 MTR_4g103890 29.360 453 267 11 24 466 11 420 1.68e-50 177
MS.gene56714.t1 MTR_2g096830 30.687 466 266 13 12 466 6 425 8.09e-49 173
MS.gene56714.t1 MTR_6g023065 29.769 477 278 12 6 466 25 460 1.00e-47 171
MS.gene56714.t1 MTR_6g022780 31.250 464 269 13 12 466 3 425 1.23e-46 167
MS.gene56714.t1 MTR_1g007190 46.193 197 86 5 34 225 21 202 6.01e-45 156
MS.gene56714.t1 MTR_7g038910 31.385 462 270 13 12 465 17 439 1.61e-44 162
MS.gene56714.t1 MTR_3g005740 29.810 473 285 11 4 466 31 466 1.94e-44 162
MS.gene56714.t1 MTR_7g038910 33.234 337 199 8 12 342 17 333 2.44e-44 160
MS.gene56714.t1 MTR_7g038910 33.236 343 203 8 12 348 17 339 4.19e-44 159
MS.gene56714.t1 MTR_2g096830 32.344 337 201 8 12 344 6 319 5.19e-44 158
MS.gene56714.t1 MTR_6g023075 30.819 464 268 14 12 466 6 425 5.54e-44 160
MS.gene56714.t1 MTR_3g085820 30.966 352 208 8 2 342 9 336 8.53e-42 153
MS.gene56714.t1 MTR_1g070470 26.739 460 293 13 17 469 16 438 4.01e-41 152
MS.gene56714.t1 MTR_5g054730 28.604 444 267 14 13 447 17 419 7.80e-40 149
MS.gene56714.t1 MTR_0531s0020 31.454 337 205 8 12 342 36 352 1.74e-38 144
MS.gene56714.t1 MTR_1g093030 27.669 459 277 13 19 466 20 434 4.56e-38 144
MS.gene56714.t1 MTR_1g093020 27.542 472 286 15 6 466 8 434 1.88e-37 142
MS.gene56714.t1 MTR_1g093020 28.146 437 262 13 6 433 8 401 3.09e-36 139
MS.gene56714.t1 MTR_4g055610 26.407 462 269 15 12 452 25 436 5.23e-32 127
MS.gene56714.t1 MTR_4g075750 25.054 467 304 12 7 459 56 490 6.05e-30 122
MS.gene56714.t1 MTR_8g099320 25.000 480 312 17 4 471 7 450 1.07e-27 115
MS.gene56714.t1 MTR_1g492640 24.835 455 292 17 26 468 62 478 9.60e-26 110
MS.gene56714.t1 MTR_3g115090 24.176 455 288 17 22 458 83 498 3.82e-22 99.8
MS.gene56714.t1 MTR_5g081630 24.941 421 266 15 54 468 4 380 8.06e-22 97.4
MS.gene56714.t1 MTR_5g023260 23.661 448 291 13 23 455 107 518 2.05e-18 88.2
MS.gene56714.t1 MTR_4g104510 24.726 457 288 19 8 451 18 431 4.45e-18 86.7
MS.gene56714.t1 MTR_5g023240 24.883 426 266 17 24 433 87 474 1.39e-17 85.5
MS.gene56714.t1 MTR_3g069960 28.278 389 227 18 89 468 35 380 3.99e-17 83.2
MS.gene56714.t1 MTR_3g069960 28.278 389 227 18 89 468 88 433 4.15e-17 84.0
MS.gene56714.t1 MTR_4g104510 25.054 459 286 20 8 451 18 433 5.47e-17 83.6
MS.gene56714.t1 MTR_1g492640 24.765 319 216 11 26 338 62 362 9.52e-17 82.4
MS.gene56714.t1 MTR_1g492640 24.765 319 216 11 26 338 44 344 1.07e-16 82.0
MS.gene56714.t1 MTR_1g492640 24.523 367 231 14 112 468 16 346 1.44e-15 78.2
MS.gene56714.t1 MTR_2g012470 22.152 474 291 16 23 467 95 519 4.56e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56714.t1 AT5G49630 74.678 466 116 2 6 469 14 479 0.0 733
MS.gene56714.t1 AT1G58360 66.667 468 153 2 4 469 15 481 0.0 678
MS.gene56714.t1 AT1G10010 65.451 466 160 1 4 469 8 472 0.0 653
MS.gene56714.t1 AT1G10010 65.451 466 160 1 4 469 9 473 0.0 653
MS.gene56714.t1 AT5G09220 60.217 460 180 3 11 469 33 490 0.0 589
MS.gene56714.t1 AT5G63850 59.130 460 185 3 11 469 6 463 0.0 582
MS.gene56714.t1 AT1G77380 58.386 471 192 3 1 471 9 475 0.0 570
MS.gene56714.t1 AT1G44100 53.763 465 209 2 12 471 16 479 0.0 549
MS.gene56714.t1 AT5G23810 47.640 445 224 5 19 458 21 461 3.09e-139 408
MS.gene56714.t1 AT5G23810 50.932 322 151 4 19 337 21 338 8.33e-108 324
MS.gene56714.t1 AT5G23810 48.333 240 117 4 19 255 21 256 7.49e-71 226
MS.gene56714.t1 AT5G23810 49.505 202 97 3 19 217 21 220 1.31e-59 195
MS.gene56714.t1 AT5G23810 49.505 202 97 3 19 217 21 220 1.31e-59 195
MS.gene56714.t1 AT5G40780 29.938 481 271 14 10 466 5 443 6.97e-55 190
MS.gene56714.t1 AT1G24400 30.398 477 281 12 2 468 5 440 3.37e-53 185
MS.gene56714.t1 AT1G48640 30.515 485 277 13 3 468 9 452 8.01e-52 182
MS.gene56714.t1 AT5G40780 30.734 436 253 12 39 466 1 395 2.79e-50 176
MS.gene56714.t1 AT5G40780 30.734 436 253 12 39 466 1 395 2.79e-50 176
MS.gene56714.t1 AT1G67640 29.832 476 275 12 7 468 10 440 3.14e-47 169
MS.gene56714.t1 AT3G01760 28.387 465 281 12 12 463 16 441 5.23e-45 163
MS.gene56714.t1 AT1G61270 27.586 464 285 11 12 463 18 442 1.61e-43 159
MS.gene56714.t1 AT1G25530 29.274 468 261 14 4 458 16 426 7.15e-37 141
MS.gene56714.t1 AT1G71680 27.542 472 298 14 4 468 13 447 6.73e-36 138
MS.gene56714.t1 AT1G71680 30.556 324 204 9 22 342 33 338 1.47e-33 130
MS.gene56714.t1 AT1G08230 23.265 490 302 14 10 468 2 448 7.44e-25 107
MS.gene56714.t1 AT5G41800 23.517 472 310 16 15 471 14 449 4.18e-22 99.0
MS.gene56714.t1 AT2G39890 23.142 471 309 17 8 468 12 439 3.87e-18 87.0
MS.gene56714.t1 AT2G39890 23.142 471 309 17 8 468 12 439 3.87e-18 87.0
MS.gene56714.t1 AT2G39890 23.571 420 273 15 54 468 4 380 2.30e-17 84.3
MS.gene56714.t1 AT1G08230 25.949 316 205 9 159 468 56 348 3.22e-17 83.2
MS.gene56714.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene56714.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene56714.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene56714.t1 AT4G35180 24.043 470 295 14 13 459 37 467 5.84e-17 83.6
MS.gene56714.t1 AT2G36590 23.753 421 268 19 13 425 15 390 1.05e-16 82.4
MS.gene56714.t1 AT3G55740 23.077 429 264 18 54 468 60 436 1.07e-16 82.4
MS.gene56714.t1 AT3G55740 23.077 429 264 18 54 468 4 380 1.13e-16 82.0
MS.gene56714.t1 AT3G55740 23.077 429 264 18 54 468 4 380 1.13e-16 82.0
MS.gene56714.t1 AT4G35180 27.273 275 170 8 13 274 37 294 3.70e-15 77.0
MS.gene56714.t1 AT1G47670 23.810 462 298 14 23 467 93 517 1.19e-14 76.6

Find 106 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGCAGTTCACTTAAT+TGG 0.155939 1.3:+12091766 MS.gene56714:CDS
GCCCTCTACAAAGCCAAATA+TGG 0.189673 1.3:-12092027 None:intergenic
CCCATTCTTCAATGATTTCT+TGG 0.199015 1.3:+12092199 MS.gene56714:CDS
ATGAAGAGAGCAAGTTTAAT+TGG 0.201285 1.3:+12091607 MS.gene56714:CDS
CCAAGAGAGCTCATGGAAAT+TGG 0.207479 1.3:-12091048 None:intergenic
AATGATTTCTTGGGACTAAT+TGG 0.215440 1.3:+12092209 MS.gene56714:CDS
GTCCATGTGAATGAATATTT+TGG 0.215858 1.3:-12092299 None:intergenic
TCCTTAACTGGGGTCCAAAT+TGG 0.216889 1.3:+12091305 MS.gene56714:CDS
CAATTTGTTACCTGCAACTT+TGG 0.220958 1.3:-12091135 None:intergenic
GTCTTTGTCCAACCCATATT+TGG 0.233068 1.3:+12092014 MS.gene56714:CDS
CATGTGACAACATCCTTAAC+TGG 0.255703 1.3:+12091293 MS.gene56714:CDS
TTCTTAATGTACATTTCTAT+AGG 0.295334 1.3:-12092266 None:intergenic
GCTATGAATATTCCACTATA+TGG 0.304768 1.3:+12092098 MS.gene56714:CDS
AAGAAGAGTGGAAGTGAAAT+AGG 0.305312 1.3:-12089491 None:intergenic
CCTTAACTGGGGTCCAAATT+GGG 0.308636 1.3:+12091306 MS.gene56714:CDS
CCATTCTTCAATGATTTCTT+GGG 0.308680 1.3:+12092200 MS.gene56714:CDS
GCACAAATGGGTTGGGTTGC+TGG 0.310749 1.3:+12089436 MS.gene56714:CDS
ATAACGGCTGTGATTGGTTC+TGG 0.315179 1.3:+12089388 MS.gene56714:CDS
ATAGGGAAGTAAACGGTTAA+TGG 0.315363 1.3:-12092248 None:intergenic
GCATTGCAGTTCACTTAATT+GGG 0.317175 1.3:+12091767 MS.gene56714:CDS
ACCTTAGGTTATGCTGCATT+TGG 0.323218 1.3:+12091667 MS.gene56714:CDS
TTCTGGAGGGCTTGATTTCA+AGG 0.324342 1.3:-12091575 None:intergenic
CAGTAACATCTACCCCAATT+TGG 0.327211 1.3:-12091319 None:intergenic
GCTTATTCTTCCATTGGCCT+TGG 0.338456 1.3:+12091101 MS.gene56714:CDS
GCTCATGGAAATTGGGTATC+TGG 0.345385 1.3:-12091040 None:intergenic
CGTTCACCTGATCCTGTTCA+TGG 0.347145 1.3:+12089526 MS.gene56714:CDS
TTGGTTTCTATGAGCCCTTT+TGG 0.350564 1.3:+12091722 MS.gene56714:CDS
TGTGAAAGCAGTTTGATCTT+TGG 0.353809 1.3:-12090938 None:intergenic
CCCAATTTGGACCCCAGTTA+AGG 0.356669 1.3:-12091306 None:intergenic
GATATTAAGTTGGCTATGTT+TGG 0.356877 1.3:+12092331 MS.gene56714:CDS
CCATTCACAAATTTACTATC+TGG 0.358132 1.3:-12092068 None:intergenic
ATAGAAGCCCCGGAAAATTA+TGG 0.365124 1.3:+12088916 MS.gene56714:CDS
TGAATTACTTCAGAGTAATA+TGG 0.375520 1.3:+12092132 MS.gene56714:CDS
ACATTATAGCTTCCATATAG+TGG 0.375753 1.3:-12092110 None:intergenic
TCATTTGCTTATTCTTCCAT+TGG 0.380915 1.3:+12091095 MS.gene56714:CDS
AAAATTTCAGCTATGTGGTT+TGG 0.388210 1.3:+12090163 MS.gene56714:CDS
AATAACTGCATCAATTAGTA+TGG 0.389829 1.3:+12090226 MS.gene56714:CDS
AGCATGGGCAATTGCACAAA+TGG 0.391852 1.3:+12089423 MS.gene56714:CDS
CCAATTTCCATGAGCTCTCT+TGG 0.392720 1.3:+12091048 MS.gene56714:CDS
CTTTCCATAGCCAAAGTTGC+AGG 0.406579 1.3:+12091125 MS.gene56714:CDS
TATGTGCTATGTGGAACCTT+AGG 0.410854 1.3:+12091652 MS.gene56714:CDS
GCGCAGTATATAAATCTTGT+AGG 0.412631 1.3:+12090185 MS.gene56714:CDS
CCAAGAAATCATTGAAGAAT+GGG 0.415932 1.3:-12092199 None:intergenic
TAGTTCCTCTTGCCATGAAC+AGG 0.421639 1.3:-12089538 None:intergenic
ATTTCTATTATCTCAGCTGC+TGG 0.428223 1.3:+12092356 MS.gene56714:CDS
TCTTAATGTACATTTCTATA+GGG 0.430781 1.3:-12092265 None:intergenic
CCCAAGAAATCATTGAAGAA+TGG 0.431584 1.3:-12092200 None:intergenic
CATATTATAACGGCTGTGAT+TGG 0.431871 1.3:+12089382 MS.gene56714:CDS
GTAAACGGTTAATGGATAGA+AGG 0.436951 1.3:-12092240 None:intergenic
GGCAAAGTCTATTAGCCAAA+AGG 0.440455 1.3:-12091737 None:intergenic
GATGGACGAGCCAAGAGAAC+TGG 0.446781 1.3:+12088964 MS.gene56714:CDS
AATCCTGTGAGAAAATTTCC+TGG 0.449333 1.3:-12091700 None:intergenic
GGCAATTGCACAAATGGGTT+GGG 0.449599 1.3:+12089429 MS.gene56714:CDS
TCAGCTGCTGGATCAATTCA+AGG 0.457275 1.3:+12092368 MS.gene56714:CDS
TAATGTGCTCATTGAGATCC+AGG 0.457500 1.3:+12091406 MS.gene56714:CDS
CAAGAGAGCTCATGGAAATT+GGG 0.458498 1.3:-12091047 None:intergenic
GTTACCTGCAACTTTGGCTA+TGG 0.461223 1.3:-12091129 None:intergenic
CTCTTGCCATGAACAGGATC+AGG 0.468402 1.3:-12089532 None:intergenic
GGGCAATTGCACAAATGGGT+TGG 0.468496 1.3:+12089428 MS.gene56714:CDS
TTATGAAATACCAGTTCTCT+TGG 0.472142 1.3:-12088974 None:intergenic
TCACTTAATTGGGGCATACC+AGG 0.476849 1.3:+12091777 MS.gene56714:CDS
CCCATATTTGGCTTTGTAGA+GGG 0.481292 1.3:+12092026 MS.gene56714:CDS
CCCTCTACAAAGCCAAATAT+GGG 0.490888 1.3:-12092026 None:intergenic
GCAAAGTCTATTAGCCAAAA+GGG 0.493348 1.3:-12091736 None:intergenic
CATTTCTATAGGGAAGTAAA+CGG 0.499195 1.3:-12092255 None:intergenic
TGGAGGATGTTCCAAGCTAT+TGG 0.501682 1.3:+12091356 MS.gene56714:CDS
GGCAGAAAATTTCAGCTATG+TGG 0.510184 1.3:+12090158 MS.gene56714:CDS
TTGAGAGCCAAGAGAGCTCA+TGG 0.511375 1.3:-12091055 None:intergenic
CATGCAAAGATTATCATGAA+AGG 0.513368 1.3:-12090999 None:intergenic
CTTGGCTCAAGATATTAAGT+TGG 0.518945 1.3:+12092321 MS.gene56714:CDS
AGATGTTACTGCAACAGAAA+AGG 0.520611 1.3:+12091331 MS.gene56714:CDS
CCAGATAGTAAATTTGTGAA+TGG 0.520639 1.3:+12092068 MS.gene56714:CDS
AATATTCATTCACATGGACT+TGG 0.526623 1.3:+12092303 MS.gene56714:CDS
GCATGGGCAATTGCACAAAT+GGG 0.527749 1.3:+12089424 MS.gene56714:CDS
ATGCAAAGATTATCATGAAA+GGG 0.529495 1.3:-12090998 None:intergenic
ATGCGATGTCACCAATAGCT+TGG 0.532044 1.3:-12091367 None:intergenic
TCCAAATGCAGCATAACCTA+AGG 0.534958 1.3:-12091668 None:intergenic
TATCATTGTTCTCCTCTGAA+AGG 0.535151 1.3:-12092419 None:intergenic
TGCTAGTGCACATATTATAA+CGG 0.539503 1.3:+12089372 MS.gene56714:CDS
CATCATGCATATAGAAGCCC+CGG 0.546253 1.3:+12088906 None:intergenic
ACCCATATTTGGCTTTGTAG+AGG 0.550221 1.3:+12092025 MS.gene56714:CDS
TCAAACTGCTTTCACAAGCA+TGG 0.567315 1.3:+12090945 MS.gene56714:CDS
CTACAAAGCCAAATATGGGT+TGG 0.568932 1.3:-12092022 None:intergenic
CATTGCAGTTCACTTAATTG+GGG 0.570061 1.3:+12091768 MS.gene56714:CDS
CTGCAACTTTGGCTATGGAA+AGG 0.581563 1.3:-12091124 None:intergenic
TATGGAAAGGCCAAGGCCAA+TGG 0.581601 1.3:-12091111 None:intergenic
AATCTTGTAGGTGTGACCAT+TGG 0.583439 1.3:+12090197 MS.gene56714:CDS
CTTAACTGGGGTCCAAATTG+GGG 0.588022 1.3:+12091307 MS.gene56714:CDS
CTGATCCTGTTCATGGCAAG+AGG 0.588105 1.3:+12089533 MS.gene56714:CDS
ATGTGACAACATCCTTAACT+GGG 0.597025 1.3:+12091294 MS.gene56714:CDS
GTGAACTGCAATGCAAACAT+TGG 0.597294 1.3:-12091758 None:intergenic
CAGCTGCTGGATCAATTCAA+GGG 0.598708 1.3:+12092369 MS.gene56714:CDS
TTGATGAATTTGAAGGGACA+TGG 0.601889 1.3:+12089344 MS.gene56714:intron
TGCCAAAATATTCATTCACA+TGG 0.602274 1.3:+12092297 MS.gene56714:CDS
GTAACAATCAGCAAGAAGAG+TGG 0.632602 1.3:-12089503 None:intergenic
CATGAACAGGATCAGGTGAA+CGG 0.635139 1.3:-12089525 None:intergenic
CTTTGGCTATGGAAAGGCCA+AGG 0.635651 1.3:-12091118 None:intergenic
GCATTTGGAAATGATGCACC+AGG 0.647793 1.3:+12091682 MS.gene56714:CDS
TTACTGCAACAGAAAAGGTG+TGG 0.655563 1.3:+12091336 MS.gene56714:CDS
CTGCAACAGAAAAGGTGTGG+AGG 0.661031 1.3:+12091339 MS.gene56714:CDS
TGCAGTTATTGTGTAGCCAA+TGG 0.661210 1.3:-12090213 None:intergenic
ATTGAAGAATGGGAACAACA+TGG 0.666871 1.3:-12092189 None:intergenic
AAGACATACAAACCTTTCAG+AGG 0.672597 1.3:+12092407 MS.gene56714:CDS
GAAGTTGTCAGAGCTAACCT+AGG 0.673566 1.3:+12089571 MS.gene56714:CDS
ATTACTTCAGAGTAATATGG+AGG 0.674777 1.3:+12092135 MS.gene56714:CDS
TGTGACAACATCCTTAACTG+GGG 0.742619 1.3:+12091295 MS.gene56714:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATTAGAAGAA+AGG - chr1.3:12089218-12089237 None:intergenic 10.0%
!! AAGATAATTTATTTAATAAG+AGG + chr1.3:12090422-12090441 MS.gene56714:intron 10.0%
!! ATTAATATCTTACATTAAAA+TGG + chr1.3:12091196-12091215 MS.gene56714:intron 10.0%
!! TAAGATATTAATTAACTATA+GGG - chr1.3:12091188-12091207 None:intergenic 10.0%
!!! AAACATTTTATCAAAATAAA+TGG - chr1.3:12089076-12089095 None:intergenic 10.0%
!!! AAATACACATTTTTATATAT+TGG + chr1.3:12089263-12089282 MS.gene56714:intron 10.0%
!!! ATTAATTTGTAAGATTTAAA+TGG - chr1.3:12091472-12091491 None:intergenic 10.0%
!!! ATTATTTACTGATTTATATA+TGG + chr1.3:12091436-12091455 MS.gene56714:intron 10.0%
!!! ATTCATATTTTTTTTTGAAA+GGG + chr1.3:12090780-12090799 MS.gene56714:intron 10.0%
!!! GGTTAAATTATTAATATTTT+AGG - chr1.3:12091821-12091840 None:intergenic 10.0%
!!! TATTCATATTTTTTTTTGAA+AGG + chr1.3:12090779-12090798 MS.gene56714:intron 10.0%
!!! TTCTTCTAATTTTTTTTTTT+TGG + chr1.3:12089218-12089237 MS.gene56714:intron 10.0%
!! AATAATTAACTAATAAAACC+AGG - chr1.3:12090015-12090034 None:intergenic 15.0%
!! ATAAATATTAGGCAATAATT+AGG - chr1.3:12089881-12089900 None:intergenic 15.0%
!! ATCTGATTTACAAATTTAAA+CGG + chr1.3:12091922-12091941 MS.gene56714:intron 15.0%
!! ATGAAAACAAAAAATTGATT+AGG - chr1.3:12090902-12090921 None:intergenic 15.0%
!! ATTCATCTAGTATAAATATT+AGG - chr1.3:12089892-12089911 None:intergenic 15.0%
!! ATTTATAATTAGAGATAAAG+CGG - chr1.3:12089247-12089266 None:intergenic 15.0%
!! GTAAGATATTAATTAACTAT+AGG - chr1.3:12091189-12091208 None:intergenic 15.0%
!! TAAAAATGGTTGAATTAATT+GGG - chr1.3:12090825-12090844 None:intergenic 15.0%
!! TAAATATTAGGCAATAATTA+GGG - chr1.3:12089880-12089899 None:intergenic 15.0%
!! TATACTAAAAATAGTTGAAT+AGG + chr1.3:12090473-12090492 MS.gene56714:intron 15.0%
!! TTAATTATGTATGTGATATA+TGG + chr1.3:12089314-12089333 MS.gene56714:intron 15.0%
!!! ACTCTTTTTTTTTTTTTTTG+AGG + chr1.3:12090562-12090581 MS.gene56714:intron 15.0%
!!! ATATATGTTTTCTTATTTCA+AGG - chr1.3:12089185-12089204 None:intergenic 15.0%
!!! ATTCAACTATTTTTAGTATA+AGG - chr1.3:12090473-12090492 None:intergenic 15.0%
!!! CTCTTTTTTTTTTTTTTTGA+GGG + chr1.3:12090563-12090582 MS.gene56714:intron 15.0%
!!! TTTGTTTTCATTATTTATCA+GGG + chr1.3:12090911-12090930 MS.gene56714:intron 15.0%
!!! TTTTGTTTTCATTATTTATC+AGG + chr1.3:12090910-12090929 MS.gene56714:intron 15.0%
!! AAAAATGGTTGAATTAATTG+GGG - chr1.3:12090824-12090843 None:intergenic 20.0%
!! AAAATCATGTGACAAATTAA+TGG - chr1.3:12090127-12090146 None:intergenic 20.0%
!! AAACTCAATAGTAATAAACA+TGG - chr1.3:12089003-12089022 None:intergenic 20.0%
!! AAATTACAAGTAAAATTGAG+AGG - chr1.3:12091899-12091918 None:intergenic 20.0%
!! AAGTTATTTATTTAGTACCT+AGG - chr1.3:12089591-12089610 None:intergenic 20.0%
!! ATTAACATGCAACATAAAAA+TGG - chr1.3:12089624-12089643 None:intergenic 20.0%
!! CTAAAAATGGTTGAATTAAT+TGG - chr1.3:12090826-12090845 None:intergenic 20.0%
!! GTTAATGTTTAAGTAGTTTA+AGG + chr1.3:12089638-12089657 MS.gene56714:intron 20.0%
!! TCACTTTAAGTAAAATTTCA+AGG - chr1.3:12089778-12089797 None:intergenic 20.0%
!! TCTTAATGTACATTTCTATA+GGG - chr1.3:12092268-12092287 None:intergenic 20.0%
!! TTCTTAATGTACATTTCTAT+AGG - chr1.3:12092269-12092288 None:intergenic 20.0%
!!! GAAACAATTATATTTTGTGT+TGG - chr1.3:12090039-12090058 None:intergenic 20.0%
!!! GTAATTCAATTTTTTAGTAG+TGG - chr1.3:12090711-12090730 None:intergenic 20.0%
!!! TCACTTCAACTATATTTTTT+TGG + chr1.3:12091160-12091179 MS.gene56714:intron 20.0%
!!! TCGTTTTAATATTTTAGTAG+AGG + chr1.3:12089701-12089720 MS.gene56714:intron 20.0%
!!! TGAAATTTTACTTAAAGTGA+TGG + chr1.3:12089778-12089797 MS.gene56714:intron 20.0%
!!! TTAAAACGATTTTCAAGTTT+CGG - chr1.3:12089690-12089709 None:intergenic 20.0%
!!! TTTGATTTGATGAATTTGAA+GGG + chr1.3:12089338-12089357 MS.gene56714:intron 20.0%
!!! TTTTGATTTGATGAATTTGA+AGG + chr1.3:12089337-12089356 MS.gene56714:intron 20.0%
! AATAACTGCATCAATTAGTA+TGG + chr1.3:12090226-12090245 MS.gene56714:CDS 25.0%
! ATCTTACATTAAAATGGTCA+TGG + chr1.3:12091202-12091221 MS.gene56714:intron 25.0%
! ATCTTCAAACATTGACAAAA+AGG - chr1.3:12091264-12091283 None:intergenic 25.0%
! ATGCAAAGATTATCATGAAA+GGG - chr1.3:12091001-12091020 None:intergenic 25.0%
! CGTATGTGTAAATATGTTTA+AGG + chr1.3:12090283-12090302 MS.gene56714:intron 25.0%
! TAGTTTATATGTACTATTGC+AGG + chr1.3:12091549-12091568 MS.gene56714:intron 25.0%
! TCGTAAGTTATTTATTTACC+TGG - chr1.3:12091798-12091817 None:intergenic 25.0%
! TGAATTACTTCAGAGTAATA+TGG + chr1.3:12092132-12092151 MS.gene56714:CDS 25.0%
!! TTGATCATCACTTCTAAAAA+TGG - chr1.3:12090839-12090858 None:intergenic 25.0%
!! TTTTGTCAATGTTTGAAGAT+GGG + chr1.3:12091264-12091283 MS.gene56714:intron 25.0%
!! TTTTTGTCAATGTTTGAAGA+TGG + chr1.3:12091263-12091282 MS.gene56714:intron 25.0%
!!! ACATTATTTTATGTGCTATG+TGG + chr1.3:12091643-12091662 MS.gene56714:CDS 25.0%
!!! GTAATGTTTTAGAGCATTTT+TGG + chr1.3:12090495-12090514 MS.gene56714:intron 25.0%
AAAATTTCAGCTATGTGGTT+TGG + chr1.3:12090163-12090182 MS.gene56714:CDS 30.0%
AACAAAGTCATAGTGTACTA+TGG - chr1.3:12090539-12090558 None:intergenic 30.0%
AATATTCATTCACATGGACT+TGG + chr1.3:12092303-12092322 MS.gene56714:CDS 30.0%
AATGATTTCTTGGGACTAAT+TGG + chr1.3:12092209-12092228 MS.gene56714:CDS 30.0%
ACATTATAGCTTCCATATAG+TGG - chr1.3:12092113-12092132 None:intergenic 30.0%
ATGAAGAGAGCAAGTTTAAT+TGG + chr1.3:12091607-12091626 MS.gene56714:CDS 30.0%
ATTACTTCAGAGTAATATGG+AGG + chr1.3:12092135-12092154 MS.gene56714:CDS 30.0%
CAAGATGTCTATAGAATCAT+TGG - chr1.3:12089936-12089955 None:intergenic 30.0%
CAGTAAATAATTTACTTGCC+TGG - chr1.3:12091427-12091446 None:intergenic 30.0%
CATGCAAAGATTATCATGAA+AGG - chr1.3:12091002-12091021 None:intergenic 30.0%
CATTTCTATAGGGAAGTAAA+CGG - chr1.3:12092258-12092277 None:intergenic 30.0%
CCAAGAAATCATTGAAGAAT+GGG - chr1.3:12092202-12092221 None:intergenic 30.0%
CCAGATAGTAAATTTGTGAA+TGG + chr1.3:12092068-12092087 MS.gene56714:CDS 30.0%
CCATTCACAAATTTACTATC+TGG - chr1.3:12092071-12092090 None:intergenic 30.0%
CCATTCTTCAATGATTTCTT+GGG + chr1.3:12092200-12092219 MS.gene56714:CDS 30.0%
GAATTAATTGGGGTAGAAAT+TGG - chr1.3:12090814-12090833 None:intergenic 30.0%
GCTATGAATATTCCACTATA+TGG + chr1.3:12092098-12092117 MS.gene56714:CDS 30.0%
TCATTTGCTTATTCTTCCAT+TGG + chr1.3:12091095-12091114 MS.gene56714:CDS 30.0%
TGCCAAAATATTCATTCACA+TGG + chr1.3:12092297-12092316 MS.gene56714:CDS 30.0%
TGCTAGTGCACATATTATAA+CGG + chr1.3:12089372-12089391 MS.gene56714:CDS 30.0%
TTATGAAATACCAGTTCTCT+TGG - chr1.3:12088977-12088996 None:intergenic 30.0%
TTTGTCAATGTTTGAAGATG+GGG + chr1.3:12091265-12091284 MS.gene56714:intron 30.0%
! ACATGATTTTCTTTGATAGG+AGG + chr1.3:12090137-12090156 MS.gene56714:intron 30.0%
! GTCACATGATTTTCTTTGAT+AGG + chr1.3:12090134-12090153 MS.gene56714:intron 30.0%
! GTCCATGTGAATGAATATTT+TGG - chr1.3:12092302-12092321 None:intergenic 30.0%
!! GATATTAAGTTGGCTATGTT+TGG + chr1.3:12092331-12092350 MS.gene56714:CDS 30.0%
!! GTTTAAGGAAGTGTCTTATA+CGG + chr1.3:12089653-12089672 MS.gene56714:intron 30.0%
!! TACTTAGTCAAAAGTTGATG+AGG - chr1.3:12090263-12090282 None:intergenic 30.0%
!!! GAATGAATATTTTGGCATGT+TGG - chr1.3:12092294-12092313 None:intergenic 30.0%
AAGAAGAGTGGAAGTGAAAT+AGG - chr1.3:12089494-12089513 None:intergenic 35.0%
AAGACATACAAACCTTTCAG+AGG + chr1.3:12092407-12092426 MS.gene56714:CDS 35.0%
AATCCTGTGAGAAAATTTCC+TGG - chr1.3:12091703-12091722 None:intergenic 35.0%
AGATGTTACTGCAACAGAAA+AGG + chr1.3:12091331-12091350 MS.gene56714:CDS 35.0%
AGCTAATGTGTGATTTCCTA+TGG + chr1.3:12091987-12092006 MS.gene56714:intron 35.0%
ATAGGGAAGTAAACGGTTAA+TGG - chr1.3:12092251-12092270 None:intergenic 35.0%
ATGTGACAACATCCTTAACT+GGG + chr1.3:12091294-12091313 MS.gene56714:CDS 35.0%
ATGTGTGATTTCCTATGGTT+AGG + chr1.3:12091992-12092011 MS.gene56714:intron 35.0%
ATTAAGTGTCTCATCACATG+TGG - chr1.3:12089853-12089872 None:intergenic 35.0%
ATTGAAGAATGGGAACAACA+TGG - chr1.3:12092192-12092211 None:intergenic 35.0%
ATTTCTATTATCTCAGCTGC+TGG + chr1.3:12092356-12092375 MS.gene56714:CDS 35.0%
CATATTATAACGGCTGTGAT+TGG + chr1.3:12089382-12089401 MS.gene56714:CDS 35.0%
CATTGCAGTTCACTTAATTG+GGG + chr1.3:12091768-12091787 MS.gene56714:CDS 35.0%
CCCAAGAAATCATTGAAGAA+TGG - chr1.3:12092203-12092222 None:intergenic 35.0%
CCCATTCTTCAATGATTTCT+TGG + chr1.3:12092199-12092218 MS.gene56714:CDS 35.0%
CTTGGCTCAAGATATTAAGT+TGG + chr1.3:12092321-12092340 MS.gene56714:CDS 35.0%
GAAAATGCAAAAAGAACTGC+AGG - chr1.3:12089463-12089482 None:intergenic 35.0%
GCAAAGTCTATTAGCCAAAA+GGG - chr1.3:12091739-12091758 None:intergenic 35.0%
GCATTGCAGTTCACTTAATT+GGG + chr1.3:12091767-12091786 MS.gene56714:CDS 35.0%
GCGCAGTATATAAATCTTGT+AGG + chr1.3:12090185-12090204 MS.gene56714:CDS 35.0%
TGCATTGCAGTTCACTTAAT+TGG + chr1.3:12091766-12091785 MS.gene56714:CDS 35.0%
TGTGAAAGCAGTTTGATCTT+TGG - chr1.3:12090941-12090960 None:intergenic 35.0%
TTGATGAATTTGAAGGGACA+TGG + chr1.3:12089344-12089363 MS.gene56714:intron 35.0%
! GAAGTGTCTTATACGGTATA+TGG + chr1.3:12089660-12089679 MS.gene56714:intron 35.0%
! GGAAATTTTCTCACAGGATT+TGG + chr1.3:12091703-12091722 MS.gene56714:CDS 35.0%
! GTAAACGGTTAATGGATAGA+AGG - chr1.3:12092243-12092262 None:intergenic 35.0%
! GTTGAATCTTTTCATGTACC+TGG + chr1.3:12089994-12090013 MS.gene56714:intron 35.0%
!! CAATTTGTTACCTGCAACTT+TGG - chr1.3:12091138-12091157 None:intergenic 35.0%
!! TGGAGTTTTATCACTAGCAT+GGG + chr1.3:12089408-12089427 MS.gene56714:CDS 35.0%
AATCTTGTAGGTGTGACCAT+TGG + chr1.3:12090197-12090216 MS.gene56714:CDS 40.0%
ACCTTAGGTTATGCTGCATT+TGG + chr1.3:12091667-12091686 MS.gene56714:CDS 40.0%
AGGGCCAAAGCAAACAAAAA+TGG + chr1.3:12092045-12092064 MS.gene56714:CDS 40.0%
ATAGAAGCCCCGGAAAATTA+TGG + chr1.3:12088916-12088935 MS.gene56714:CDS 40.0%
CAAGAGAGCTCATGGAAATT+GGG - chr1.3:12091050-12091069 None:intergenic 40.0%
CAGTAACATCTACCCCAATT+TGG - chr1.3:12091322-12091341 None:intergenic 40.0%
CATGTGACAACATCCTTAAC+TGG + chr1.3:12091293-12091312 MS.gene56714:CDS 40.0%
CCCTCTACAAAGCCAAATAT+GGG - chr1.3:12092029-12092048 None:intergenic 40.0%
CTACAAAGCCAAATATGGGT+TGG - chr1.3:12092025-12092044 None:intergenic 40.0%
CTCACAGCTAATCAAATGTG+AGG - chr1.3:12089744-12089763 None:intergenic 40.0%
GGCAAAGTCTATTAGCCAAA+AGG - chr1.3:12091740-12091759 None:intergenic 40.0%
GGCAGAAAATTTCAGCTATG+TGG + chr1.3:12090158-12090177 MS.gene56714:CDS 40.0%
GTAACAATCAGCAAGAAGAG+TGG - chr1.3:12089506-12089525 None:intergenic 40.0%
GTCTTTGTCCAACCCATATT+TGG + chr1.3:12092014-12092033 MS.gene56714:CDS 40.0%
GTGAACTGCAATGCAAACAT+TGG - chr1.3:12091761-12091780 None:intergenic 40.0%
GTGTCTTATACGGTATATGG+TGG + chr1.3:12089663-12089682 MS.gene56714:intron 40.0%
TAATGTGCTCATTGAGATCC+AGG + chr1.3:12091406-12091425 MS.gene56714:CDS 40.0%
TATGTGCTATGTGGAACCTT+AGG + chr1.3:12091652-12091671 MS.gene56714:CDS 40.0%
TCAAACTGCTTTCACAAGCA+TGG + chr1.3:12090945-12090964 MS.gene56714:CDS 40.0%
TCCAAATGCAGCATAACCTA+AGG - chr1.3:12091671-12091690 None:intergenic 40.0%
TGCAGTTATTGTGTAGCCAA+TGG - chr1.3:12090216-12090235 None:intergenic 40.0%
TGTGACAACATCCTTAACTG+GGG + chr1.3:12091295-12091314 MS.gene56714:CDS 40.0%
TTACTGCAACAGAAAAGGTG+TGG + chr1.3:12091336-12091355 MS.gene56714:CDS 40.0%
TTGGACAAAGACCTAACCAT+AGG - chr1.3:12092006-12092025 None:intergenic 40.0%
! CTCTTCATCACTCTGTTTTC+TGG - chr1.3:12091595-12091614 None:intergenic 40.0%
! GTCGTCGAAGTTTTTGTCTT+CGG - chr1.3:12088944-12088963 None:intergenic 40.0%
! TCATCACTCTGTTTTCTGGA+GGG - chr1.3:12091591-12091610 None:intergenic 40.0%
! TCGTCGAAGTTTTTGTCTTC+GGG - chr1.3:12088943-12088962 None:intergenic 40.0%
! TTCATCACTCTGTTTTCTGG+AGG - chr1.3:12091592-12091611 None:intergenic 40.0%
! TTGGTTTCTATGAGCCCTTT+TGG + chr1.3:12091722-12091741 MS.gene56714:CDS 40.0%
! TTTGATTAGCTGTGAGTGCA+CGG + chr1.3:12089748-12089767 MS.gene56714:intron 40.0%
!! ACCCATATTTGGCTTTGTAG+AGG + chr1.3:12092025-12092044 MS.gene56714:CDS 40.0%
!! CCCATATTTGGCTTTGTAGA+GGG + chr1.3:12092026-12092045 MS.gene56714:CDS 40.0%
!! CTGGAGTTTTATCACTAGCA+TGG + chr1.3:12089407-12089426 MS.gene56714:CDS 40.0%
!!! CTGGCCATTTTTGTTTGCTT+TGG - chr1.3:12092052-12092071 None:intergenic 40.0%
AGCATGGGCAATTGCACAAA+TGG + chr1.3:12089423-12089442 MS.gene56714:CDS 45.0%
ATGCGATGTCACCAATAGCT+TGG - chr1.3:12091370-12091389 None:intergenic 45.0%
CAGCTGCTGGATCAATTCAA+GGG + chr1.3:12092369-12092388 MS.gene56714:CDS 45.0%
CATGAACAGGATCAGGTGAA+CGG - chr1.3:12089528-12089547 None:intergenic 45.0%
CCAAGAGAGCTCATGGAAAT+TGG - chr1.3:12091051-12091070 None:intergenic 45.0%
CCAATTTCCATGAGCTCTCT+TGG + chr1.3:12091048-12091067 MS.gene56714:CDS 45.0%
CCTTAACTGGGGTCCAAATT+GGG + chr1.3:12091306-12091325 MS.gene56714:CDS 45.0%
CTGCAACTTTGGCTATGGAA+AGG - chr1.3:12091127-12091146 None:intergenic 45.0%
CTTAACTGGGGTCCAAATTG+GGG + chr1.3:12091307-12091326 MS.gene56714:CDS 45.0%
CTTTCCATAGCCAAAGTTGC+AGG + chr1.3:12091125-12091144 MS.gene56714:CDS 45.0%
GAAGTTGTCAGAGCTAACCT+AGG + chr1.3:12089571-12089590 MS.gene56714:CDS 45.0%
GACAAAAACTTCGACGACGA+TGG + chr1.3:12088946-12088965 MS.gene56714:CDS 45.0%
GCATGGGCAATTGCACAAAT+GGG + chr1.3:12089424-12089443 MS.gene56714:CDS 45.0%
GCATTTGGAAATGATGCACC+AGG + chr1.3:12091682-12091701 MS.gene56714:CDS 45.0%
GCCCTCTACAAAGCCAAATA+TGG - chr1.3:12092030-12092049 None:intergenic 45.0%
GCTCATGGAAATTGGGTATC+TGG - chr1.3:12091043-12091062 None:intergenic 45.0%
GTTACCTGCAACTTTGGCTA+TGG - chr1.3:12091132-12091151 None:intergenic 45.0%
TAGTTCCTCTTGCCATGAAC+AGG - chr1.3:12089541-12089560 None:intergenic 45.0%
TCACTTAATTGGGGCATACC+AGG + chr1.3:12091777-12091796 MS.gene56714:CDS 45.0%
TCAGCTGCTGGATCAATTCA+AGG + chr1.3:12092368-12092387 MS.gene56714:CDS 45.0%
TCCTTAACTGGGGTCCAAAT+TGG + chr1.3:12091305-12091324 MS.gene56714:CDS 45.0%
TGGAGGATGTTCCAAGCTAT+TGG + chr1.3:12091356-12091375 MS.gene56714:CDS 45.0%
! ATAACGGCTGTGATTGGTTC+TGG + chr1.3:12089388-12089407 MS.gene56714:CDS 45.0%
! CGTCGAAGTTTTTGTCTTCG+GGG - chr1.3:12088942-12088961 None:intergenic 45.0%
! GCACCAGGAAATTTTCTCAC+AGG + chr1.3:12091697-12091716 MS.gene56714:CDS 45.0%
! GCTTATTCTTCCATTGGCCT+TGG + chr1.3:12091101-12091120 MS.gene56714:CDS 45.0%
! GGCAATTGCACAAATGGGTT+GGG + chr1.3:12089429-12089448 MS.gene56714:CDS 45.0%
! TCTTCGGGGCCATAATTTTC+CGG - chr1.3:12088928-12088947 None:intergenic 45.0%
! TTCTGGAGGGCTTGATTTCA+AGG - chr1.3:12091578-12091597 None:intergenic 45.0%
!! ATAAATATTTAAATAAAGTA+AGG - chr1.3:12091842-12091861 None:intergenic 5.0%
CCCAATTTGGACCCCAGTTA+AGG - chr1.3:12091309-12091328 None:intergenic 50.0%
CGTTCACCTGATCCTGTTCA+TGG + chr1.3:12089526-12089545 MS.gene56714:CDS 50.0%
CTCTTGCCATGAACAGGATC+AGG - chr1.3:12089535-12089554 None:intergenic 50.0%
CTGATCCTGTTCATGGCAAG+AGG + chr1.3:12089533-12089552 MS.gene56714:CDS 50.0%
CTTTGGCTATGGAAAGGCCA+AGG - chr1.3:12091121-12091140 None:intergenic 50.0%
GGGCAATTGCACAAATGGGT+TGG + chr1.3:12089428-12089447 MS.gene56714:CDS 50.0%
TATGGAAAGGCCAAGGCCAA+TGG - chr1.3:12091114-12091133 None:intergenic 50.0%
TTGAGAGCCAAGAGAGCTCA+TGG - chr1.3:12091058-12091077 None:intergenic 50.0%
! CTGCAACAGAAAAGGTGTGG+AGG + chr1.3:12091339-12091358 MS.gene56714:CDS 50.0%
! CTTCGGGGCCATAATTTTCC+GGG - chr1.3:12088927-12088946 None:intergenic 50.0%
! TTCGGGGCCATAATTTTCCG+GGG - chr1.3:12088926-12088945 None:intergenic 50.0%
GATGGACGAGCCAAGAGAAC+TGG + chr1.3:12088964-12088983 MS.gene56714:CDS 55.0%
! GATTAGCTGTGAGTGCACGG+AGG + chr1.3:12089751-12089770 MS.gene56714:intron 55.0%
!! GCACAAATGGGTTGGGTTGC+TGG + chr1.3:12089436-12089455 MS.gene56714:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 12088910 12092439 12088910 ID=MS.gene56714
chr1.3 mRNA 12088910 12092439 12088910 ID=MS.gene56714.t1;Parent=MS.gene56714
chr1.3 exon 12088910 12088985 12088910 ID=MS.gene56714.t1.exon1;Parent=MS.gene56714.t1
chr1.3 CDS 12088910 12088985 12088910 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12089359 12089592 12089359 ID=MS.gene56714.t1.exon2;Parent=MS.gene56714.t1
chr1.3 CDS 12089359 12089592 12089359 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12090156 12090249 12090156 ID=MS.gene56714.t1.exon3;Parent=MS.gene56714.t1
chr1.3 CDS 12090156 12090249 12090156 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12090932 12091146 12090932 ID=MS.gene56714.t1.exon4;Parent=MS.gene56714.t1
chr1.3 CDS 12090932 12091146 12090932 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12091282 12091427 12091282 ID=MS.gene56714.t1.exon5;Parent=MS.gene56714.t1
chr1.3 CDS 12091282 12091427 12091282 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12091571 12091798 12091571 ID=MS.gene56714.t1.exon6;Parent=MS.gene56714.t1
chr1.3 CDS 12091571 12091798 12091571 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
chr1.3 exon 12092014 12092439 12092014 ID=MS.gene56714.t1.exon7;Parent=MS.gene56714.t1
chr1.3 CDS 12092014 12092439 12092014 ID=cds.MS.gene56714.t1;Parent=MS.gene56714.t1
Gene Sequence

>MS.gene56714

ATGCATATAGAAGCCCCGGAAAATTATGGCCCCGAAGACAAAAACTTCGACGACGATGGACGAGCCAAGAGAACTGGTATTTCATAAGTACCATGTTTATTACTATTGAGTTTGATGCGCATATGACAACATAACATAAACATATTCAAATACTATTATGAAACCATTTATTTTGATAAAATGTTTTATGTTATAGTTTTTTCGTTCTAAATTTTAATTTTGAAATTTTCACTTTGTTTTTCAAAAATTTGTACAATTTCTTTTCTTCAAATCCTTGAAATAAGAAAACATATATATATATTAAACCTTTCTTCTAATTTTTTTTTTTTGGTTACCGCTTTATCTCTAATTATAAATACACATTTTTATATATTGGTAATATTTTTTATTGTATTAATTTTTCTTTAATTATGTATGTGATATATGGTTTTGATTTGATGAATTTGAAGGGACATGGTTGACTGCTAGTGCACATATTATAACGGCTGTGATTGGTTCTGGAGTTTTATCACTAGCATGGGCAATTGCACAAATGGGTTGGGTTGCTGGTCCTGCAGTTCTTTTTGCATTTTCTTTCATTACCTATTTCACTTCCACTCTTCTTGCTGATTGTTACCGTTCACCTGATCCTGTTCATGGCAAGAGGAACTACACTTACACTGAAGTTGTCAGAGCTAACCTAGGTACTAAATAAATAACTTTACTATATAACCATTTTTATGTTGCATGTTAATGTTTAAGTAGTTTAAGGAAGTGTCTTATACGGTATATGGTGGACCGAAACTTGAAAATCGTTTTAATATTTTAGTAGAGGCTTATGATATTACTCGTCCTCACATTTGATTAGCTGTGAGTGCACGGAGGACCTTGAAATTTTACTTAAAGTGATGGCAATTATTGTTATCGAAATTTTGAGCAATTTTTAAATATCGATTGTAGACCACATGTGATGAGACACTTAATCATACCCTAATTATTGCCTAATATTTATACTAGATGAATTCATAACAGCTTGTTTGATTACCAATGATTCTATAGACATCTTGTATTATAAAAAAATTGTAGAAACTTGAGACTCTCTGTTGTTGAATCTTTTCATGTACCTGGTTTTATTAGTTAATTATTTCCAACACAAAATATAATTGTTTCTTGTATGTTCTTAGCTAGTTTAAGAAATAATTCAATTTTTTTATTAAATTGATAAAAATAGCTCACCATTAATTTGTCACATGATTTTCTTTGATAGGAGGCAGAAAATTTCAGCTATGTGGTTTGGCGCAGTATATAAATCTTGTAGGTGTGACCATTGGCTACACAATAACTGCATCAATTAGTATGGTGTAAGTTTTTCCTCATCAACTTTTGACTAAGTACGTATGTGTAAATATGTTTAAGGTTCTTGATGAAACAATTGATTATTTATAAATTGTAGATATTATATTTAAGTACAACAATATACTAAAAGCATTTTAGTAAGTGTGAAGATTTCTGAATTCTCAATAAAAAAGTGAGAAGATAATTTATTTAATAAGAGGAAGAATATCAAGAGAATTTTATGTACCTTATACTAAAAATAGTTGAATAGGTAATGTTTTAGAGCATTTTTGGAATATTAGTTTGACAAAACCATAGTACACTATGACTTTGTTGAAACTCTTTTTTTTTTTTTTTGAGGGAACTTTGTTGAAACTCTATAAAGTCTAACTTTTACAAAAAAAAAAAAATAGTAGTAGTTCACTGTGATTCTTCGAAATTCATCATCAATTCAAACGTACACTAAGTAGAATCGATAAGTTCACCACTACTAAAAAATTGAATTACTGACAATATTTTTTTTTTGACAAAATTGAAAAAAAAAAGAATTTGTTTTATTCATATTTTTTTTTGAAAGGGACTTGTATCCAATTTCTACCCCAATTAATTCAACCATTTTTAGAAGTGATGATCAAATAAGAAATACACTGAATTGACAAAATTACATCATATAATCCTAATCAATTTTTTGTTTTCATTATTTATCAGGGCTGTCCAAAGATCAAACTGCTTTCACAAGCATGGACATCAAGACAAGTGCTATGTTTCAAATAACCCTTTCATGATAATCTTTGCATGCATTCAAATTGTTCTATGCCAGATACCCAATTTCCATGAGCTCTCTTGGCTCTCAATTGTTGCAGCAGTTATGTCATTTGCTTATTCTTCCATTGGCCTTGGCCTTTCCATAGCCAAAGTTGCAGGTAACAAATTGCATCACTTCAACTATATTTTTTTGGTACCCTATAGTTAATTAATATCTTACATTAAAATGGTCATGGTCTTCAATTTCACATTATTAAATAATAATAATAATTCCTTTTTGTCAATGTTTGAAGATGGGGATAATCATGTGACAACATCCTTAACTGGGGTCCAAATTGGGGTAGATGTTACTGCAACAGAAAAGGTGTGGAGGATGTTCCAAGCTATTGGTGACATCGCATTTGCTTATGCTTTTTCTAATGTGCTCATTGAGATCCAGGCAAGTAAATTATTTACTGATTTATATATGGTTTAAATATACCATTTAAATCTTACAAATTAATATATCACTTTTTATTTTTAGTTTATATAAAAAATTATTTTTAGTTTATATAAAAAATTAGTTTATATGTACTATTGCAGGATACCTTGAAATCAAGCCCTCCAGAAAACAGAGTGATGAAGAGAGCAAGTTTAATTGGAATTTTGACTACAACATTATTTTATGTGCTATGTGGAACCTTAGGTTATGCTGCATTTGGAAATGATGCACCAGGAAATTTTCTCACAGGATTTGGTTTCTATGAGCCCTTTTGGCTAATAGACTTTGCCAATGTTTGCATTGCAGTTCACTTAATTGGGGCATACCAGGTAAATAAATAACTTACGACCTAAAATATTAATAATTTAACCTTACTTTATTTAAATATTTATTAACAAAATAATTTTTTTAAAATAAAATCAAACACCTCTCAATTTTACTTGTAATTTTATATCTGATTTACAAATTTAAACGGAGTTGTCTGATCTTGATCTGAACGTTCGACATGTATGACTAAAGCTAATGTGTGATTTCCTATGGTTAGGTCTTTGTCCAACCCATATTTGGCTTTGTAGAGGGCCAAAGCAAACAAAAATGGCCAGATAGTAAATTTGTGAATGGAGAGCATGCTATGAATATTCCACTATATGGAAGCTATAATGTGAATTACTTCAGAGTAATATGGAGGAGTTGTTATGTGATTATCACTGCTATCATAGCCATGTTGTTCCCATTCTTCAATGATTTCTTGGGACTAATTGGTTCACTATCCTTCTATCCATTAACCGTTTACTTCCCTATAGAAATGTACATTAAGAAAACCAACATGCCAAAATATTCATTCACATGGACTTGGCTCAAGATATTAAGTTGGCTATGTTTGGTCATTTCTATTATCTCAGCTGCTGGATCAATTCAAGGGCTTGCAACATCACTCAAGACATACAAACCTTTCAGAGGAGAACAATGA
Protein sequence

>MS.gene56714.t1

MHIEAPENYGPEDKNFDDDGRAKRTGTWLTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYTEVVRANLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVQRSNCFHKHGHQDKCYVSNNPFMIIFACIQIVLCQIPNFHELSWLSIVAAVMSFAYSSIGLGLSIAKVADGDNHVTTSLTGVQIGVDVTATEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENRVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFVQPIFGFVEGQSKQKWPDSKFVNGEHAMNIPLYGSYNVNYFRVIWRSCYVIITAIIAMLFPFFNDFLGLIGSLSFYPLTVYFPIEMYIKKTNMPKYSFTWTWLKILSWLCLVISIISAAGSIQGLATSLKTYKPFRGEQ