Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56884.t1 | XP_013457848.1 | 98.8 | 960 | 12 | 0 | 1 | 960 | 1 | 960 | 0.00E+00 | 1866.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56884.t1 | Q8GUL2 | 73.1 | 957 | 253 | 2 | 1 | 957 | 1 | 953 | 0.0e+00 | 1389.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56884.t1 | A0A072UQ05 | 98.8 | 960 | 12 | 0 | 1 | 960 | 1 | 960 | 0.0e+00 | 1866.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014807 | MS.gene56884 | PPI |
| MS.gene56884 | MS.gene32606 | PPI |
| MS.gene072925 | MS.gene56884 | PPI |
| MS.gene32605 | MS.gene56884 | PPI |
| MS.gene072924 | MS.gene56884 | PPI |
| MS.gene56884 | MS.gene014808 | PPI |
| MS.gene32604 | MS.gene56884 | PPI |
| MS.gene072926 | MS.gene56884 | PPI |
| MS.gene014809 | MS.gene56884 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56884.t1 | MTR_4g107290 | 98.750 | 960 | 12 | 0 | 1 | 960 | 1 | 960 | 0.0 | 1956 |
| MS.gene56884.t1 | MTR_4g107290 | 98.042 | 817 | 16 | 0 | 1 | 817 | 1 | 817 | 0.0 | 1659 |
| MS.gene56884.t1 | MTR_7g084880 | 24.496 | 943 | 573 | 36 | 1 | 877 | 1 | 870 | 1.36e-36 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56884.t1 | AT5G62600 | 73.145 | 957 | 253 | 2 | 1 | 957 | 1 | 953 | 0.0 | 1441 |
Find 197 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTGACGGCGCCTTTC+TGG | 0.098576 | 8.1:-17816283 | None:intergenic |
| ACCACTTCTACTCGAGATTT+TGG | 0.179131 | 8.1:-17833827 | None:intergenic |
| GATCTTAAGCATACTAAATT+TGG | 0.179535 | 8.1:+17821944 | MS.gene56884:CDS |
| ACCAATTATATCTCCTTTAC+AGG | 0.182837 | 8.1:+17829787 | MS.gene56884:CDS |
| CATTACCTGTCTGGAGTAAC+TGG | 0.218231 | 8.1:-17828390 | None:intergenic |
| TTCCAGCATTACCAGAATTT+TGG | 0.218743 | 8.1:+17833781 | MS.gene56884:CDS |
| CTGCTGCTGCTTTGGCGTTT+AGG | 0.220108 | 8.1:+17828694 | MS.gene56884:CDS |
| ACAGATGCTGCTTCAGTTCT+TGG | 0.226644 | 8.1:+17827364 | MS.gene56884:CDS |
| TGCACGTGCCTGCGCAAGAC+TGG | 0.241497 | 8.1:+17815452 | MS.gene56884:CDS |
| GAGACCACTCGAGTTGAATT+TGG | 0.268394 | 8.1:+17834201 | MS.gene56884:CDS |
| GATACCTGAGTTCTGACTTT+TGG | 0.279308 | 8.1:-17815282 | None:intergenic |
| CTATTGGAGCTTATTCAAAA+TGG | 0.281015 | 8.1:+17828583 | MS.gene56884:CDS |
| GGTGATGGTAGAGTGCATTT+AGG | 0.282469 | 8.1:-17814358 | None:intergenic |
| TGTTTCTAGGTGAGAACTTC+TGG | 0.284504 | 8.1:+17831108 | MS.gene56884:intron |
| ATGCGCAGCTGCTGCTGCTT+TGG | 0.293069 | 8.1:+17828686 | MS.gene56884:CDS |
| TCTCTCTAGTGAAGTTATAA+AGG | 0.317495 | 8.1:+17831215 | MS.gene56884:CDS |
| CTTTCAGAGGCATCTGTAAA+TGG | 0.322558 | 8.1:+17818102 | MS.gene56884:CDS |
| AGAATATATACCAGGATTCT+TGG | 0.327641 | 8.1:+17815525 | MS.gene56884:CDS |
| CTTCTATGACATTTAACTTC+TGG | 0.332488 | 8.1:+17821340 | MS.gene56884:CDS |
| GGTTGTTACTGAACTTCCTT+TGG | 0.333623 | 8.1:+17829730 | MS.gene56884:CDS |
| ATGTACTCATTCCGTTCATT+AGG | 0.336162 | 8.1:-17828656 | None:intergenic |
| TTTGAGTATTGCTGAGCTTA+AGG | 0.344690 | 8.1:+17816357 | MS.gene56884:CDS |
| AAACAATCATCTGCTATATC+AGG | 0.347089 | 8.1:-17832974 | None:intergenic |
| GATCTGGCAAACACCACAAC+GGG | 0.351236 | 8.1:+17833713 | MS.gene56884:CDS |
| ACCTGTAAAGGAGATATAAT+TGG | 0.353065 | 8.1:-17829788 | None:intergenic |
| CCGGCGCAATAGAGCAGTTC+AGG | 0.359465 | 8.1:+17834159 | MS.gene56884:CDS |
| TAATGAAGCAACCAAAATTC+TGG | 0.361242 | 8.1:-17833792 | None:intergenic |
| AAGCTTTGTGGATGCCTAGA+TGG | 0.364173 | 8.1:+17829520 | MS.gene56884:CDS |
| TTCAGTTGAACTTAACTAGA+AGG | 0.365216 | 8.1:+17821370 | MS.gene56884:CDS |
| TTAGTTGATTGCTCTATGAT+TGG | 0.367385 | 8.1:+17833064 | MS.gene56884:CDS |
| ATCAGAAAAGAAATGCAATA+TGG | 0.369741 | 8.1:-17833684 | None:intergenic |
| CAAAGTTTCTAGGTTGCTAC+TGG | 0.372507 | 8.1:-17814841 | None:intergenic |
| CTGGCATTAACTCGATCATA+TGG | 0.372635 | 8.1:+17833974 | MS.gene56884:CDS |
| AACAAAATATCAAAGTTTCT+AGG | 0.379466 | 8.1:-17814851 | None:intergenic |
| GCGCCTTCTCACAAGTATTC+AGG | 0.382690 | 8.1:+17832853 | MS.gene56884:CDS |
| AACTCCCTCCCACAGCGTTC+CGG | 0.384679 | 8.1:+17815034 | MS.gene56884:CDS |
| AAAGAAATGCAATATGGAAT+TGG | 0.385953 | 8.1:-17833678 | None:intergenic |
| GTGATGGTAGAGTGCATTTA+GGG | 0.387500 | 8.1:-17814357 | None:intergenic |
| GAAAGATCTTGATAATCTTC+AGG | 0.390550 | 8.1:-17821905 | None:intergenic |
| AAGAGCTCTCAGATGTTTGC+CGG | 0.394363 | 8.1:+17834140 | MS.gene56884:CDS |
| AAGAATCCTGGTATATATTC+TGG | 0.399730 | 8.1:-17815523 | None:intergenic |
| TCTTTCGTCTGAGGACCTTA+AGG | 0.403410 | 8.1:+17821922 | MS.gene56884:CDS |
| TAGTTGATTGCTCTATGATT+GGG | 0.404013 | 8.1:+17833065 | MS.gene56884:CDS |
| TTGAATTAACGGCGCATTAG+TGG | 0.404670 | 8.1:-17819517 | None:intergenic |
| GCTTTCAGGACCTTGATTGA+TGG | 0.405761 | 8.1:-17829894 | None:intergenic |
| AAAAGAGCTTACTTCTCAAA+TGG | 0.411218 | 8.1:+17816306 | MS.gene56884:CDS |
| GCACGTGCCTGCGCAAGACT+GGG | 0.418882 | 8.1:+17815453 | MS.gene56884:CDS |
| TGGGGTACAGGAGGAAGTTT+CGG | 0.420153 | 8.1:-17828370 | None:intergenic |
| TAGTATGCTTAAGATCCTTA+AGG | 0.420919 | 8.1:-17821937 | None:intergenic |
| GAGAACTTCTGGAAGGTTCA+TGG | 0.424071 | 8.1:+17831119 | MS.gene56884:CDS |
| TTCATTACCATATGAAATAT+AGG | 0.426064 | 8.1:-17821482 | None:intergenic |
| AAGTCTGTGACAGCAGTTGA+TGG | 0.427316 | 8.1:-17834040 | None:intergenic |
| ACATCTGAGAGCTCTTCAAT+TGG | 0.428842 | 8.1:-17834133 | None:intergenic |
| TGCTAGATTATTTGCGGACA+TGG | 0.430133 | 8.1:+17821073 | MS.gene56884:CDS |
| AAAATGTGTACCCATGCTTT+AGG | 0.430489 | 8.1:-17816530 | None:intergenic |
| TTCTTGAGGCATTTGCTTCG+TGG | 0.431107 | 8.1:+17816502 | MS.gene56884:CDS |
| TGCATGCGAACGGTATCATC+AGG | 0.435786 | 8.1:-17814380 | None:intergenic |
| CAAAACAAAGCAGCTTCTGC+TGG | 0.438103 | 8.1:-17827761 | None:intergenic |
| GCACTTTCAGATGTGGCATC+TGG | 0.443570 | 8.1:+17834085 | MS.gene56884:CDS |
| ATAGAAGCAATATCATATTC+TGG | 0.450197 | 8.1:-17821324 | None:intergenic |
| GACAGTGCTGTGAGAACTAA+TGG | 0.450318 | 8.1:-17818060 | None:intergenic |
| AGAACTTCTGGAAGGTTCAT+GGG | 0.457679 | 8.1:+17831120 | MS.gene56884:CDS |
| GGCAATTGCTAGATTATTTG+CGG | 0.458185 | 8.1:+17821067 | MS.gene56884:CDS |
| GCTCACAATTGGTGCAATGC+TGG | 0.461031 | 8.1:+17831143 | MS.gene56884:CDS |
| TACGTGGAACTGATTGCAAC+TGG | 0.463073 | 8.1:+17821104 | MS.gene56884:CDS |
| TGCTGAAGACTCGTTGCACC+TGG | 0.470441 | 8.1:+17829597 | MS.gene56884:CDS |
| TGGGATGCTAGCACTGGAAT+GGG | 0.471724 | 8.1:+17833994 | MS.gene56884:CDS |
| ATGAGAACTAAGAACAGATC+CGG | 0.472088 | 8.1:-17818037 | None:intergenic |
| CAGATGCTATCCAACGGCTT+TGG | 0.472208 | 8.1:+17830112 | MS.gene56884:CDS |
| ATCAACTGCTGTCACAGACT+TGG | 0.474184 | 8.1:+17834042 | MS.gene56884:CDS |
| AGGGAGTCCTATATTTCATA+TGG | 0.477422 | 8.1:+17821475 | MS.gene56884:intron |
| GTGGAATAGTGAAATGGCTC+AGG | 0.479123 | 8.1:+17815482 | MS.gene56884:CDS |
| TTATCGATGCCAGTCGTGCT+TGG | 0.479355 | 8.1:+17830271 | MS.gene56884:intron |
| TATCGATGCCAGTCGTGCTT+GGG | 0.481166 | 8.1:+17830272 | MS.gene56884:intron |
| CGCAGTGGCCGGAACGCTGT+GGG | 0.482015 | 8.1:-17815042 | None:intergenic |
| AGGTTCATGGGGCTCACAAT+TGG | 0.484154 | 8.1:+17831132 | MS.gene56884:CDS |
| TAGCATTGCAGTGGCTGCAT+TGG | 0.487025 | 8.1:+17815426 | MS.gene56884:CDS |
| ATCATATGGGATGCTAGCAC+TGG | 0.492621 | 8.1:+17833988 | MS.gene56884:CDS |
| TAATAGTAGTAATGAACAAA+AGG | 0.493694 | 8.1:+17827730 | MS.gene56884:CDS |
| TCGTGGCTTCGCCTAAAGCA+TGG | 0.493975 | 8.1:+17816519 | MS.gene56884:CDS |
| CTACTTGAAGAATTTGATTG+AGG | 0.495952 | 8.1:+17832811 | MS.gene56884:CDS |
| ATAATTATACTATCTCTGAT+TGG | 0.500717 | 8.1:-17833749 | None:intergenic |
| GGAACAATGACTTGAATTAA+CGG | 0.501505 | 8.1:-17819528 | None:intergenic |
| GTTTGTTCCACATCTACAAT+CGG | 0.503725 | 8.1:+17829542 | MS.gene56884:CDS |
| ATGGGATGCTAGCACTGGAA+TGG | 0.505235 | 8.1:+17833993 | MS.gene56884:CDS |
| CACGTGCCTGCGCAAGACTG+GGG | 0.505660 | 8.1:+17815454 | MS.gene56884:CDS |
| TCTACAATCGGACAGTTAGC+GGG | 0.506008 | 8.1:+17829554 | MS.gene56884:CDS |
| TCCTGGTATATATTCTGGAT+TGG | 0.507557 | 8.1:-17815518 | None:intergenic |
| TCAGGTGTCTTACACACTAC+TGG | 0.508893 | 8.1:+17833955 | MS.gene56884:intron |
| ACTTATTGAAGATGTTTCAC+AGG | 0.512750 | 8.1:+17815253 | MS.gene56884:CDS |
| AACCAAAATTCTGGTAATGC+TGG | 0.513710 | 8.1:-17833783 | None:intergenic |
| GTCTGGAGTAACTGGGGTAC+AGG | 0.514698 | 8.1:-17828382 | None:intergenic |
| TCCAAAATCTCGAGTAGAAG+TGG | 0.516359 | 8.1:+17833826 | MS.gene56884:CDS |
| ATAGGTTCAACGAGACTTTG+AGG | 0.517531 | 8.1:+17815011 | MS.gene56884:intron |
| ATCATCTGCTATATCAGGCC+GGG | 0.517909 | 8.1:-17832969 | None:intergenic |
| ACGAACTCTCGATGCGTGGC+AGG | 0.521472 | 8.1:+17814430 | MS.gene56884:CDS |
| TTATGAGTCACTTGTATCAC+TGG | 0.524132 | 8.1:+17821555 | MS.gene56884:CDS |
| CTTAAAAGCACTTTCAGATG+TGG | 0.524206 | 8.1:+17834078 | MS.gene56884:CDS |
| ACTGCAGCAGGAAACATTGA+TGG | 0.524667 | 8.1:+17819489 | MS.gene56884:CDS |
| CGTGGCTTCGCCTAAAGCAT+GGG | 0.525982 | 8.1:+17816520 | MS.gene56884:CDS |
| GTAAGTAACTCCAAGAATCC+TGG | 0.526444 | 8.1:-17815535 | None:intergenic |
| AGATGTGGAACAAACCATCT+AGG | 0.527298 | 8.1:-17829534 | None:intergenic |
| TGGCATTAACTCGATCATAT+GGG | 0.528627 | 8.1:+17833975 | MS.gene56884:CDS |
| CATCAGGAAGCCATCAATCA+AGG | 0.529464 | 8.1:+17829884 | MS.gene56884:intron |
| CTGGTAATGCTGGAACCTCT+AGG | 0.529849 | 8.1:-17833773 | None:intergenic |
| ATTAGGATATCTAAAACTGA+AGG | 0.531489 | 8.1:-17828639 | None:intergenic |
| TATTGCTGAGCTTAAGGAGC+AGG | 0.531789 | 8.1:+17816363 | MS.gene56884:CDS |
| TTGATACACTACACTGCAGC+AGG | 0.533207 | 8.1:+17819477 | MS.gene56884:CDS |
| GCGTTTAGGCACATCTGTGA+TGG | 0.535100 | 8.1:+17828708 | MS.gene56884:CDS |
| AGTGGCCGGAACGCTGTGGG+AGG | 0.536708 | 8.1:-17815039 | None:intergenic |
| AGACAGACACTAACCTGTAA+AGG | 0.539733 | 8.1:-17829800 | None:intergenic |
| TTCTCAAACCTTGAGAAGCA+AGG | 0.540410 | 8.1:+17814872 | MS.gene56884:CDS |
| AGAGATAAAGAAAGCATGGC+TGG | 0.541269 | 8.1:-17831197 | None:intergenic |
| ACGTGCCTGCGCAAGACTGG+GGG | 0.542065 | 8.1:+17815455 | MS.gene56884:CDS |
| TGAGAAGGCGCGTTGTGTGC+CGG | 0.542492 | 8.1:-17832841 | None:intergenic |
| GAATTCTGAGCTACTTTCAG+AGG | 0.544543 | 8.1:+17818089 | MS.gene56884:CDS |
| TAGAATCACCTTGCTTCTCA+AGG | 0.546247 | 8.1:-17814880 | None:intergenic |
| TCGAAGCTGAGAGAAATAAG+AGG | 0.546761 | 8.1:+17821512 | MS.gene56884:CDS |
| TTCAAGTAGTCAGCACAAGA+TGG | 0.546980 | 8.1:-17832797 | None:intergenic |
| TTAATGAGTCGCGCAGTGGC+CGG | 0.547177 | 8.1:-17815053 | None:intergenic |
| GCGCAGTGGCCGGAACGCTG+TGG | 0.548376 | 8.1:-17815043 | None:intergenic |
| ATTTCTTGTTTCAGCTGTTG+CGG | 0.548666 | 8.1:+17827333 | MS.gene56884:intron |
| ACATTTCTTTCAGGTTCTTG+AGG | 0.549075 | 8.1:+17816488 | MS.gene56884:intron |
| GCTCTTCAATTGGAACAGAT+AGG | 0.551551 | 8.1:-17834123 | None:intergenic |
| GATTTAAGATTCATAACTTG+AGG | 0.553612 | 8.1:-17819549 | None:intergenic |
| AATCATCTGCTATATCAGGC+CGG | 0.556123 | 8.1:-17832970 | None:intergenic |
| AGGAGGAAGTTTCGGAAGCA+AGG | 0.561915 | 8.1:-17828362 | None:intergenic |
| CTAGAGAGATAAAGAAAGCA+TGG | 0.562240 | 8.1:-17831201 | None:intergenic |
| TGAGAGAAATAAGAGGCTGC+AGG | 0.564111 | 8.1:+17821519 | MS.gene56884:CDS |
| CCTGAACTGCTCTATTGCGC+CGG | 0.564941 | 8.1:-17834159 | None:intergenic |
| ATCTACAATCGGACAGTTAG+CGG | 0.565539 | 8.1:+17829553 | MS.gene56884:CDS |
| GAAATGGCTCAGGGATGAGA+TGG | 0.566339 | 8.1:+17815492 | MS.gene56884:CDS |
| TGCTGCAGGAATTCACAGCC+CGG | 0.568216 | 8.1:+17832951 | MS.gene56884:intron |
| GTCTTGCGCAGGCACGTGCA+CGG | 0.569298 | 8.1:-17815449 | None:intergenic |
| GATGCTGCTTCAGTTCTTGG+TGG | 0.569638 | 8.1:+17827367 | MS.gene56884:CDS |
| TGAGAACTAAGAACAGATCC+GGG | 0.570000 | 8.1:-17818036 | None:intergenic |
| TCCAATCCAGAATATATACC+AGG | 0.571375 | 8.1:+17815517 | MS.gene56884:CDS |
| CTTATTGAAGATGTTTCACA+GGG | 0.574106 | 8.1:+17815254 | MS.gene56884:CDS |
| GCTAGATTATTTGCGGACAT+GGG | 0.575010 | 8.1:+17821074 | MS.gene56884:CDS |
| GGGATGGTGGAATAGTGAAA+TGG | 0.577712 | 8.1:+17815476 | MS.gene56884:CDS |
| ATAGCATCTGCCACAACTTG+AGG | 0.577992 | 8.1:-17830099 | None:intergenic |
| TTATCAAGATCTTTCGTCTG+AGG | 0.579528 | 8.1:+17821913 | MS.gene56884:CDS |
| AAAGTTTCTAGGTTGCTACT+GGG | 0.580198 | 8.1:-17814840 | None:intergenic |
| GAACGGTATCATCAGGGTGA+TGG | 0.581180 | 8.1:-17814373 | None:intergenic |
| TGCACCTGGTTGAAGCCTTG+AGG | 0.582099 | 8.1:+17829611 | MS.gene56884:CDS |
| TGATGCTAAGAGAGCTCTTG+AGG | 0.587110 | 8.1:+17829754 | MS.gene56884:CDS |
| TGAAGCAGAAGTAATGCCTC+AGG | 0.588060 | 8.1:+17827817 | MS.gene56884:CDS |
| GTGGCCGGAACGCTGTGGGA+GGG | 0.589687 | 8.1:-17815038 | None:intergenic |
| ATTACCTGTCTGGAGTAACT+GGG | 0.589791 | 8.1:-17828389 | None:intergenic |
| AAAATTCTGAAGAAAGCGAT+CGG | 0.591927 | 8.1:-17814405 | None:intergenic |
| TCTAGGTGAGAACTTCTGGA+AGG | 0.592234 | 8.1:+17831112 | MS.gene56884:intron |
| TCTGCATATGAAACTTCTTG+AGG | 0.592444 | 8.1:+17827408 | MS.gene56884:CDS |
| GTAGTAATGAACAAAAGGAA+TGG | 0.592630 | 8.1:+17827735 | MS.gene56884:CDS |
| AGATAGCAGCTCGTCCAGAA+AGG | 0.593820 | 8.1:+17816269 | MS.gene56884:CDS |
| GATACAAGTGACTCATAAGC+AGG | 0.595058 | 8.1:-17821550 | None:intergenic |
| TGTAAAACATCCTCAAGTTG+TGG | 0.595777 | 8.1:+17830089 | MS.gene56884:CDS |
| TTCAACGAACTCTCGATGCG+TGG | 0.600610 | 8.1:+17814426 | MS.gene56884:CDS |
| GCTCTCTTAGCATCATCCAA+AGG | 0.607950 | 8.1:-17829746 | None:intergenic |
| AGAGCTTACTTCTCAAATGG+AGG | 0.608823 | 8.1:+17816309 | MS.gene56884:CDS |
| TTAGGATATCTAAAACTGAA+GGG | 0.610429 | 8.1:-17828638 | None:intergenic |
| CTTTCAGATGTGGCATCTGG+AGG | 0.611122 | 8.1:+17834088 | MS.gene56884:CDS |
| ACACCTGAATACTTGTGAGA+AGG | 0.616732 | 8.1:-17832856 | None:intergenic |
| TGATCTGGCAAACACCACAA+CGG | 0.616742 | 8.1:+17833712 | MS.gene56884:CDS |
| ATTTGGTGTGTGTATCATAG+AGG | 0.620229 | 8.1:+17834218 | MS.gene56884:CDS |
| TCCTCCAAAAGTCAGAACTC+AGG | 0.621151 | 8.1:+17815278 | MS.gene56884:CDS |
| ATTACCTCAAGGCTTCAACC+AGG | 0.621335 | 8.1:-17829615 | None:intergenic |
| AATCTTCAGGATACTGAACC+CGG | 0.622658 | 8.1:-17821892 | None:intergenic |
| GCATCTGGAGGTGATACTAA+CGG | 0.623915 | 8.1:+17834100 | MS.gene56884:CDS |
| GTACCCCAGTTACTCCAGAC+AGG | 0.624785 | 8.1:+17828385 | MS.gene56884:CDS |
| CTTGTAGATTAGCATTGCAG+TGG | 0.625006 | 8.1:+17815417 | MS.gene56884:intron |
| GATAGTATAATTATTCCTAG+AGG | 0.627753 | 8.1:+17833758 | MS.gene56884:CDS |
| TGGAGTAACTGGGGTACAGG+AGG | 0.631820 | 8.1:-17828379 | None:intergenic |
| GAACTTCTGGAAGGTTCATG+GGG | 0.631980 | 8.1:+17831121 | MS.gene56884:CDS |
| TTGGGATCACAGTACAGCAT+AGG | 0.632307 | 8.1:+17833083 | MS.gene56884:CDS |
| TAACTGTCCGATTGTAGATG+TGG | 0.641888 | 8.1:-17829549 | None:intergenic |
| TTAGGATGAGGAAGACGTGA+AGG | 0.645745 | 8.1:+17821046 | MS.gene56884:intron |
| TGCAGTGTAGTGTATCAACT+CGG | 0.648103 | 8.1:-17819472 | None:intergenic |
| CTACAATCGGACAGTTAGCG+GGG | 0.649155 | 8.1:+17829555 | MS.gene56884:CDS |
| ACATTTAATGAGTCGCGCAG+TGG | 0.653190 | 8.1:-17815057 | None:intergenic |
| GCGATCGGCTTGCATGCGAA+CGG | 0.654628 | 8.1:-17814390 | None:intergenic |
| CACACCAAATTCAACTCGAG+TGG | 0.659599 | 8.1:-17834205 | None:intergenic |
| GGGAGTATAGACAGTCCACA+TGG | 0.662541 | 8.1:-17828618 | None:intergenic |
| TTGTGGCAGATGCTATCCAA+CGG | 0.663478 | 8.1:+17830106 | MS.gene56884:CDS |
| GCATGCGAACGGTATCATCA+GGG | 0.670467 | 8.1:-17814379 | None:intergenic |
| GATAAAGAAAGCATGGCTGG+TGG | 0.682032 | 8.1:-17831194 | None:intergenic |
| ATAGAGCAATCAACTAACGA+AGG | 0.684184 | 8.1:-17833058 | None:intergenic |
| TGCTTGGGACATGAGAACAA+TGG | 0.695535 | 8.1:+17830287 | MS.gene56884:CDS |
| TGGCTTGATACAGCACCATG+TGG | 0.697379 | 8.1:+17828603 | MS.gene56884:CDS |
| CGTGCCTGCGCAAGACTGGG+GGG | 0.701717 | 8.1:+17815456 | MS.gene56884:CDS |
| ACAGCTGAGTGATTCTACGA+AGG | 0.703842 | 8.1:+17819572 | MS.gene56884:CDS |
| TTACCTGTCTGGAGTAACTG+GGG | 0.713721 | 8.1:-17828388 | None:intergenic |
| TGGAATAGTGAAATGGCTCA+GGG | 0.714001 | 8.1:+17815483 | MS.gene56884:CDS |
| ATCTGGCAAACACCACAACG+GGG | 0.717394 | 8.1:+17833714 | MS.gene56884:CDS |
| TCTGGCAAACACCACAACGG+GGG | 0.728992 | 8.1:+17833715 | MS.gene56884:CDS |
| GGCGAGGGGATAAACAACTG+AGG | 0.741182 | 8.1:-17833028 | None:intergenic |
| GGACATGGGTGATTCATACG+TGG | 0.757265 | 8.1:+17821088 | MS.gene56884:CDS |
| TTATTGAAGATGTTTCACAG+GGG | 0.817174 | 8.1:+17815255 | MS.gene56884:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17814329 | 17834237 | 17814329 | ID=MS.gene56884 |
| chr8.1 | mRNA | 17814329 | 17834237 | 17814329 | ID=MS.gene56884.t1;Parent=MS.gene56884 |
| chr8.1 | exon | 17814329 | 17814451 | 17814329 | ID=MS.gene56884.t1.exon1;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17814329 | 17814451 | 17814329 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17814816 | 17814893 | 17814816 | ID=MS.gene56884.t1.exon2;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17814816 | 17814893 | 17814816 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17815015 | 17815077 | 17815015 | ID=MS.gene56884.t1.exon3;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17815015 | 17815077 | 17815015 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17815252 | 17815299 | 17815252 | ID=MS.gene56884.t1.exon4;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17815252 | 17815299 | 17815252 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17815424 | 17815570 | 17815424 | ID=MS.gene56884.t1.exon5;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17815424 | 17815570 | 17815424 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17816253 | 17816384 | 17816253 | ID=MS.gene56884.t1.exon6;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17816253 | 17816384 | 17816253 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17816501 | 17816541 | 17816501 | ID=MS.gene56884.t1.exon7;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17816501 | 17816541 | 17816501 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17818032 | 17818123 | 17818032 | ID=MS.gene56884.t1.exon8;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17818032 | 17818123 | 17818032 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17819466 | 17819593 | 17819466 | ID=MS.gene56884.t1.exon9;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17819466 | 17819593 | 17819466 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17821050 | 17821125 | 17821050 | ID=MS.gene56884.t1.exon10;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17821050 | 17821125 | 17821050 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17821271 | 17821391 | 17821271 | ID=MS.gene56884.t1.exon11;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17821271 | 17821391 | 17821271 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17821477 | 17821576 | 17821477 | ID=MS.gene56884.t1.exon12;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17821477 | 17821576 | 17821477 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17821884 | 17821965 | 17821884 | ID=MS.gene56884.t1.exon13;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17821884 | 17821965 | 17821884 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17827347 | 17827429 | 17827347 | ID=MS.gene56884.t1.exon14;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17827347 | 17827429 | 17827347 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17827719 | 17827838 | 17827719 | ID=MS.gene56884.t1.exon15;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17827719 | 17827838 | 17827719 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17828355 | 17828406 | 17828355 | ID=MS.gene56884.t1.exon16;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17828355 | 17828406 | 17828355 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17828574 | 17828729 | 17828574 | ID=MS.gene56884.t1.exon17;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17828574 | 17828729 | 17828574 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17829509 | 17829632 | 17829509 | ID=MS.gene56884.t1.exon18;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17829509 | 17829632 | 17829509 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17829727 | 17829808 | 17829727 | ID=MS.gene56884.t1.exon19;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17829727 | 17829808 | 17829727 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17829890 | 17829978 | 17829890 | ID=MS.gene56884.t1.exon20;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17829890 | 17829978 | 17829890 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17830086 | 17830160 | 17830086 | ID=MS.gene56884.t1.exon21;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17830086 | 17830160 | 17830086 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17830284 | 17830338 | 17830284 | ID=MS.gene56884.t1.exon22;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17830284 | 17830338 | 17830284 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17831117 | 17831236 | 17831117 | ID=MS.gene56884.t1.exon23;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17831117 | 17831236 | 17831117 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17832782 | 17832874 | 17832782 | ID=MS.gene56884.t1.exon24;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17832782 | 17832874 | 17832782 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17832959 | 17833104 | 17832959 | ID=MS.gene56884.t1.exon25;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17832959 | 17833104 | 17832959 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17833670 | 17833847 | 17833670 | ID=MS.gene56884.t1.exon26;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17833670 | 17833847 | 17833670 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| chr8.1 | exon | 17833959 | 17834237 | 17833959 | ID=MS.gene56884.t1.exon27;Parent=MS.gene56884.t1 |
| chr8.1 | CDS | 17833959 | 17834237 | 17833959 | ID=cds.MS.gene56884.t1;Parent=MS.gene56884.t1 |
| Gene Sequence |
| Protein sequence |
