Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57369.t1 | XP_013456256.1 | 95 | 438 | 22 | 0 | 1 | 438 | 1 | 438 | 5.00E-250 | 873.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57369.t1 | B8AVF0 | 61.6 | 424 | 135 | 2 | 41 | 438 | 34 | 455 | 4.7e-156 | 552.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57369.t1 | A0A072UKP9 | 95.0 | 438 | 22 | 0 | 1 | 438 | 1 | 438 | 3.6e-250 | 873.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05081 | MS.gene57369 | 0.817628 | 2.99E-52 | -1.69E-46 |
| MS.gene051171 | MS.gene57369 | 0.819993 | 8.67E-53 | -1.69E-46 |
| MS.gene051242 | MS.gene57369 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene051244 | MS.gene57369 | 0.845643 | 3.57E-59 | -1.69E-46 |
| MS.gene055370 | MS.gene57369 | 0.805155 | 1.53E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene57369 | 0.866351 | 3.04E-65 | -1.69E-46 |
| MS.gene056633 | MS.gene57369 | 0.800004 | 1.77E-48 | -1.69E-46 |
| MS.gene056664 | MS.gene57369 | 0.808899 | 2.47E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene57369 | 0.837755 | 4.31E-57 | -1.69E-46 |
| MS.gene058746 | MS.gene57369 | 0.833435 | 5.34E-56 | -1.69E-46 |
| MS.gene059512 | MS.gene57369 | 0.855115 | 7.83E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57369.t1 | MTR_4g066330 | 94.977 | 438 | 22 | 0 | 1 | 438 | 1 | 438 | 0.0 | 874 |
| MS.gene57369.t1 | MTR_4g066280 | 89.286 | 420 | 45 | 0 | 19 | 438 | 19 | 438 | 0.0 | 791 |
| MS.gene57369.t1 | MTR_2g098540 | 68.527 | 448 | 112 | 3 | 17 | 438 | 8 | 452 | 0.0 | 635 |
| MS.gene57369.t1 | MTR_2g098790 | 67.808 | 438 | 111 | 3 | 27 | 438 | 26 | 459 | 0.0 | 618 |
| MS.gene57369.t1 | MTR_2g098520 | 66.743 | 436 | 115 | 3 | 29 | 438 | 24 | 455 | 0.0 | 610 |
| MS.gene57369.t1 | MTR_6g078450 | 65.548 | 447 | 126 | 3 | 18 | 438 | 13 | 457 | 0.0 | 602 |
| MS.gene57369.t1 | MTR_6g078450 | 65.548 | 447 | 126 | 3 | 18 | 438 | 13 | 457 | 0.0 | 600 |
| MS.gene57369.t1 | MTR_6g078330 | 64.847 | 458 | 127 | 4 | 9 | 438 | 7 | 458 | 0.0 | 600 |
| MS.gene57369.t1 | MTR_2g098540 | 69.877 | 405 | 94 | 2 | 60 | 438 | 6 | 408 | 0.0 | 589 |
| MS.gene57369.t1 | MTR_4g015420 | 66.745 | 427 | 128 | 6 | 23 | 438 | 47 | 470 | 0.0 | 582 |
| MS.gene57369.t1 | MTR_6g078380 | 64.206 | 447 | 133 | 3 | 18 | 438 | 13 | 458 | 0.0 | 578 |
| MS.gene57369.t1 | MTR_3g028720 | 64.186 | 430 | 126 | 2 | 35 | 438 | 32 | 459 | 0.0 | 576 |
| MS.gene57369.t1 | MTR_3g028720 | 64.186 | 430 | 126 | 2 | 35 | 438 | 32 | 459 | 0.0 | 576 |
| MS.gene57369.t1 | MTR_4g066640 | 61.659 | 446 | 145 | 3 | 17 | 438 | 15 | 458 | 0.0 | 575 |
| MS.gene57369.t1 | MTR_4g066580 | 59.914 | 464 | 156 | 3 | 1 | 438 | 1 | 460 | 0.0 | 571 |
| MS.gene57369.t1 | MTR_4g066240 | 60.310 | 451 | 148 | 3 | 17 | 438 | 9 | 457 | 0.0 | 565 |
| MS.gene57369.t1 | MTR_2g043200 | 62.527 | 467 | 126 | 8 | 18 | 438 | 1 | 464 | 0.0 | 565 |
| MS.gene57369.t1 | MTR_4g066240 | 60.444 | 450 | 147 | 3 | 17 | 437 | 9 | 456 | 0.0 | 564 |
| MS.gene57369.t1 | MTR_4g066590 | 61.369 | 453 | 142 | 3 | 17 | 438 | 4 | 454 | 0.0 | 563 |
| MS.gene57369.t1 | MTR_4g066630 | 61.625 | 443 | 142 | 2 | 21 | 437 | 19 | 459 | 0.0 | 563 |
| MS.gene57369.t1 | MTR_4g066630 | 61.625 | 443 | 142 | 2 | 21 | 437 | 19 | 459 | 0.0 | 562 |
| MS.gene57369.t1 | MTR_4g066210 | 60.592 | 439 | 142 | 3 | 29 | 438 | 28 | 464 | 0.0 | 556 |
| MS.gene57369.t1 | MTR_4g015460 | 64.419 | 430 | 141 | 7 | 18 | 438 | 19 | 445 | 0.0 | 550 |
| MS.gene57369.t1 | MTR_5g071520 | 59.355 | 465 | 144 | 4 | 17 | 438 | 7 | 469 | 0.0 | 549 |
| MS.gene57369.t1 | MTR_3g028720 | 64.213 | 394 | 113 | 2 | 35 | 402 | 32 | 423 | 0.0 | 525 |
| MS.gene57369.t1 | MTR_4g066580 | 60.047 | 428 | 141 | 3 | 1 | 402 | 1 | 424 | 0.0 | 524 |
| MS.gene57369.t1 | MTR_4g066630 | 62.010 | 408 | 127 | 2 | 21 | 402 | 19 | 424 | 0.0 | 517 |
| MS.gene57369.t1 | MTR_4g066240 | 59.277 | 415 | 138 | 3 | 17 | 402 | 9 | 421 | 6.70e-180 | 509 |
| MS.gene57369.t1 | MTR_3g026280 | 56.306 | 444 | 159 | 4 | 22 | 438 | 3 | 438 | 2.39e-178 | 508 |
| MS.gene57369.t1 | MTR_4g066340 | 63.780 | 381 | 110 | 2 | 84 | 438 | 6 | 384 | 1.51e-177 | 503 |
| MS.gene57369.t1 | MTR_4g023000 | 57.311 | 424 | 149 | 3 | 39 | 437 | 22 | 438 | 7.13e-177 | 504 |
| MS.gene57369.t1 | MTR_4g067040 | 60.591 | 406 | 126 | 3 | 17 | 390 | 4 | 407 | 3.41e-173 | 491 |
| MS.gene57369.t1 | MTR_6g078330 | 64.607 | 356 | 98 | 2 | 109 | 438 | 1 | 354 | 7.81e-169 | 480 |
| MS.gene57369.t1 | MTR_6g078330 | 62.069 | 377 | 109 | 5 | 9 | 357 | 7 | 377 | 4.30e-164 | 467 |
| MS.gene57369.t1 | MTR_4g067040 | 61.417 | 381 | 113 | 3 | 17 | 365 | 4 | 382 | 1.65e-163 | 466 |
| MS.gene57369.t1 | MTR_3g028720 | 62.745 | 357 | 105 | 2 | 35 | 365 | 32 | 386 | 2.59e-163 | 466 |
| MS.gene57369.t1 | MTR_4g066640 | 59.151 | 377 | 128 | 3 | 17 | 369 | 15 | 389 | 8.51e-162 | 461 |
| MS.gene57369.t1 | MTR_4g066630 | 60.989 | 364 | 114 | 2 | 21 | 358 | 19 | 380 | 3.66e-158 | 452 |
| MS.gene57369.t1 | MTR_6g078330 | 62.209 | 344 | 100 | 3 | 121 | 438 | 15 | 354 | 1.02e-155 | 447 |
| MS.gene57369.t1 | MTR_3g026400 | 50.939 | 426 | 177 | 4 | 39 | 438 | 35 | 454 | 9.07e-155 | 448 |
| MS.gene57369.t1 | MTR_3g026620 | 49.015 | 457 | 201 | 4 | 7 | 438 | 6 | 455 | 2.79e-153 | 444 |
| MS.gene57369.t1 | MTR_3g026400 | 50.614 | 407 | 169 | 4 | 58 | 438 | 23 | 423 | 3.22e-146 | 425 |
| MS.gene57369.t1 | MTR_4g083000 | 47.450 | 451 | 194 | 7 | 23 | 438 | 6 | 448 | 3.22e-141 | 413 |
| MS.gene57369.t1 | MTR_4g081530 | 48.372 | 430 | 193 | 3 | 35 | 438 | 18 | 444 | 3.46e-140 | 411 |
| MS.gene57369.t1 | MTR_5g044000 | 46.875 | 448 | 186 | 7 | 39 | 438 | 23 | 466 | 1.04e-135 | 400 |
| MS.gene57369.t1 | MTR_0110s0040 | 42.549 | 463 | 233 | 6 | 1 | 437 | 2 | 457 | 9.87e-134 | 395 |
| MS.gene57369.t1 | MTR_0110s0030 | 43.137 | 459 | 224 | 7 | 6 | 437 | 9 | 457 | 1.12e-132 | 392 |
| MS.gene57369.t1 | MTR_3g033810 | 46.635 | 416 | 199 | 6 | 40 | 438 | 20 | 429 | 2.47e-131 | 388 |
| MS.gene57369.t1 | MTR_3g033790 | 46.154 | 416 | 200 | 7 | 40 | 438 | 18 | 426 | 4.29e-130 | 384 |
| MS.gene57369.t1 | MTR_3g026400 | 54.878 | 328 | 120 | 3 | 39 | 340 | 35 | 360 | 3.14e-129 | 378 |
| MS.gene57369.t1 | MTR_4g131810 | 44.286 | 420 | 206 | 3 | 46 | 438 | 33 | 451 | 1.22e-123 | 369 |
| MS.gene57369.t1 | MTR_2g022760 | 43.016 | 451 | 220 | 6 | 18 | 438 | 14 | 457 | 8.55e-121 | 362 |
| MS.gene57369.t1 | MTR_2g079580 | 43.972 | 423 | 209 | 5 | 41 | 438 | 32 | 451 | 2.82e-119 | 358 |
| MS.gene57369.t1 | MTR_2g079550 | 43.560 | 427 | 205 | 6 | 41 | 438 | 30 | 449 | 1.80e-118 | 356 |
| MS.gene57369.t1 | MTR_2g079580 | 46.253 | 387 | 180 | 5 | 41 | 402 | 32 | 415 | 9.26e-118 | 350 |
| MS.gene57369.t1 | MTR_7g033860 | 44.737 | 418 | 198 | 7 | 43 | 437 | 50 | 457 | 8.53e-117 | 351 |
| MS.gene57369.t1 | MTR_4g131800 | 45.154 | 423 | 195 | 7 | 46 | 438 | 521 | 936 | 3.17e-112 | 353 |
| MS.gene57369.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 2.68e-111 | 336 |
| MS.gene57369.t1 | MTR_7g068910 | 41.270 | 441 | 217 | 7 | 25 | 438 | 14 | 439 | 3.97e-111 | 337 |
| MS.gene57369.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 5.36e-111 | 335 |
| MS.gene57369.t1 | MTR_0110s0040 | 41.889 | 413 | 208 | 6 | 1 | 387 | 2 | 408 | 9.90e-111 | 332 |
| MS.gene57369.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 1.00e-110 | 336 |
| MS.gene57369.t1 | MTR_0108s0030 | 41.928 | 415 | 196 | 5 | 43 | 437 | 5 | 394 | 7.42e-110 | 332 |
| MS.gene57369.t1 | MTR_4g016920 | 43.839 | 422 | 186 | 8 | 40 | 430 | 26 | 427 | 2.32e-109 | 332 |
| MS.gene57369.t1 | MTR_2g022710 | 41.587 | 416 | 204 | 7 | 17 | 402 | 13 | 419 | 3.12e-108 | 326 |
| MS.gene57369.t1 | MTR_7g068910 | 40.355 | 451 | 217 | 8 | 25 | 438 | 14 | 449 | 6.95e-108 | 329 |
| MS.gene57369.t1 | MTR_4g083000 | 46.537 | 361 | 155 | 5 | 109 | 438 | 1 | 354 | 4.77e-107 | 323 |
| MS.gene57369.t1 | MTR_5g068740 | 40.281 | 427 | 205 | 7 | 42 | 438 | 28 | 434 | 3.89e-103 | 316 |
| MS.gene57369.t1 | MTR_7g051510 | 43.269 | 416 | 202 | 6 | 42 | 437 | 76 | 477 | 3.94e-103 | 317 |
| MS.gene57369.t1 | MTR_2g022710 | 40.842 | 404 | 200 | 7 | 17 | 390 | 13 | 407 | 1.69e-102 | 311 |
| MS.gene57369.t1 | MTR_7g051610 | 43.645 | 417 | 199 | 6 | 42 | 437 | 76 | 477 | 1.37e-101 | 313 |
| MS.gene57369.t1 | MTR_1g088610 | 42.822 | 404 | 190 | 6 | 42 | 417 | 28 | 418 | 3.07e-101 | 315 |
| MS.gene57369.t1 | MTR_7g051650 | 41.388 | 418 | 208 | 6 | 42 | 437 | 76 | 478 | 1.18e-97 | 303 |
| MS.gene57369.t1 | MTR_7g051650 | 40.855 | 421 | 202 | 6 | 42 | 437 | 76 | 474 | 7.65e-97 | 301 |
| MS.gene57369.t1 | MTR_2g022710 | 42.063 | 378 | 184 | 7 | 17 | 364 | 13 | 385 | 1.42e-96 | 296 |
| MS.gene57369.t1 | MTR_2g022760 | 42.778 | 360 | 170 | 5 | 109 | 438 | 1 | 354 | 9.80e-92 | 284 |
| MS.gene57369.t1 | MTR_1g088630 | 45.048 | 313 | 116 | 5 | 43 | 328 | 29 | 312 | 7.38e-88 | 272 |
| MS.gene57369.t1 | MTR_1g088630 | 38.329 | 407 | 180 | 9 | 60 | 438 | 14 | 377 | 5.20e-84 | 265 |
| MS.gene57369.t1 | MTR_2g022710 | 38.333 | 360 | 186 | 5 | 109 | 438 | 1 | 354 | 1.29e-82 | 260 |
| MS.gene57369.t1 | MTR_4g016920 | 42.210 | 353 | 154 | 7 | 109 | 430 | 1 | 334 | 8.97e-82 | 258 |
| MS.gene57369.t1 | MTR_1g088630 | 46.992 | 266 | 109 | 3 | 43 | 281 | 29 | 289 | 1.61e-79 | 248 |
| MS.gene57369.t1 | MTR_4g016920 | 46.763 | 278 | 111 | 4 | 109 | 356 | 1 | 271 | 3.05e-79 | 248 |
| MS.gene57369.t1 | MTR_7g068900 | 38.420 | 367 | 175 | 7 | 104 | 438 | 17 | 364 | 2.16e-78 | 251 |
| MS.gene57369.t1 | MTR_7g056747 | 41.292 | 356 | 167 | 7 | 103 | 437 | 9 | 343 | 5.04e-77 | 245 |
| MS.gene57369.t1 | MTR_0110s0020 | 43.396 | 265 | 117 | 5 | 6 | 243 | 9 | 267 | 4.14e-72 | 229 |
| MS.gene57369.t1 | MTR_8g038650 | 43.299 | 97 | 55 | 0 | 242 | 338 | 58 | 154 | 4.30e-20 | 87.4 |
| MS.gene57369.t1 | MTR_8g038650 | 51.852 | 54 | 25 | 1 | 50 | 103 | 7 | 59 | 3.26e-12 | 64.7 |
| MS.gene57369.t1 | MTR_5g069350 | 42.373 | 118 | 33 | 5 | 329 | 430 | 48 | 146 | 1.37e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57369.t1 | AT5G42260 | 50.658 | 456 | 185 | 7 | 10 | 437 | 4 | 447 | 3.86e-160 | 462 |
| MS.gene57369.t1 | AT2G44480 | 51.382 | 434 | 184 | 2 | 29 | 437 | 23 | 454 | 7.62e-160 | 461 |
| MS.gene57369.t1 | AT2G44480 | 51.382 | 434 | 184 | 2 | 29 | 437 | 54 | 485 | 2.77e-159 | 461 |
| MS.gene57369.t1 | AT2G44450 | 52.482 | 423 | 168 | 4 | 41 | 437 | 31 | 446 | 1.94e-158 | 457 |
| MS.gene57369.t1 | AT5G44640 | 50.000 | 454 | 189 | 6 | 11 | 437 | 5 | 447 | 2.17e-158 | 457 |
| MS.gene57369.t1 | AT3G60130 | 51.288 | 427 | 174 | 5 | 38 | 437 | 27 | 446 | 2.67e-152 | 442 |
| MS.gene57369.t1 | AT5G54570 | 47.552 | 429 | 197 | 2 | 36 | 438 | 25 | 451 | 8.94e-144 | 418 |
| MS.gene57369.t1 | AT2G25630 | 47.797 | 454 | 181 | 7 | 11 | 437 | 5 | 429 | 2.77e-143 | 418 |
| MS.gene57369.t1 | AT5G24550 | 47.461 | 453 | 206 | 6 | 14 | 437 | 5 | 454 | 9.30e-143 | 418 |
| MS.gene57369.t1 | AT5G54570 | 47.552 | 429 | 197 | 2 | 36 | 438 | 25 | 451 | 1.60e-142 | 418 |
| MS.gene57369.t1 | AT1G26560 | 49.057 | 424 | 187 | 3 | 41 | 438 | 32 | 452 | 1.30e-140 | 412 |
| MS.gene57369.t1 | AT5G24540 | 47.682 | 453 | 205 | 6 | 14 | 437 | 5 | 454 | 3.19e-138 | 404 |
| MS.gene57369.t1 | AT3G60120 | 48.611 | 432 | 184 | 8 | 38 | 438 | 11 | 435 | 5.75e-137 | 404 |
| MS.gene57369.t1 | AT5G24540 | 47.682 | 453 | 205 | 6 | 14 | 437 | 5 | 454 | 7.27e-137 | 403 |
| MS.gene57369.t1 | AT3G60140 | 44.176 | 455 | 213 | 6 | 11 | 437 | 6 | 447 | 5.69e-136 | 402 |
| MS.gene57369.t1 | AT1G51470 | 47.867 | 422 | 188 | 5 | 40 | 438 | 44 | 456 | 1.34e-135 | 399 |
| MS.gene57369.t1 | AT2G44490 | 47.235 | 434 | 196 | 6 | 34 | 437 | 7 | 437 | 5.42e-135 | 399 |
| MS.gene57369.t1 | AT1G47600 | 47.156 | 422 | 191 | 5 | 40 | 438 | 44 | 456 | 6.66e-135 | 397 |
| MS.gene57369.t1 | AT1G47600 | 47.156 | 422 | 190 | 5 | 40 | 438 | 44 | 455 | 1.03e-134 | 397 |
| MS.gene57369.t1 | AT2G44470 | 43.584 | 452 | 219 | 7 | 14 | 437 | 7 | 450 | 6.77e-132 | 388 |
| MS.gene57369.t1 | AT2G44470 | 43.584 | 452 | 219 | 7 | 14 | 437 | 7 | 450 | 3.86e-130 | 388 |
| MS.gene57369.t1 | AT5G36890 | 46.636 | 431 | 202 | 6 | 25 | 438 | 7 | 426 | 6.24e-130 | 384 |
| MS.gene57369.t1 | AT5G36890 | 46.636 | 431 | 202 | 6 | 25 | 438 | 7 | 426 | 6.79e-130 | 384 |
| MS.gene57369.t1 | AT3G60140 | 45.000 | 420 | 190 | 6 | 11 | 402 | 6 | 412 | 9.90e-130 | 382 |
| MS.gene57369.t1 | AT3G18080 | 45.735 | 422 | 198 | 6 | 40 | 436 | 38 | 453 | 5.04e-129 | 382 |
| MS.gene57369.t1 | AT2G44460 | 44.737 | 456 | 215 | 8 | 10 | 437 | 3 | 449 | 1.70e-127 | 381 |
| MS.gene57369.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 3.29e-127 | 376 |
| MS.gene57369.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 3.29e-127 | 376 |
| MS.gene57369.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 2.68e-126 | 377 |
| MS.gene57369.t1 | AT2G44480 | 49.435 | 354 | 152 | 2 | 109 | 437 | 1 | 352 | 3.11e-126 | 372 |
| MS.gene57369.t1 | AT5G26000 | 43.220 | 472 | 204 | 11 | 15 | 438 | 1 | 456 | 2.16e-124 | 369 |
| MS.gene57369.t1 | AT3G03640 | 40.959 | 459 | 234 | 6 | 9 | 437 | 6 | 457 | 9.08e-124 | 370 |
| MS.gene57369.t1 | AT5G26000 | 43.220 | 472 | 204 | 11 | 15 | 438 | 1 | 456 | 2.00e-123 | 369 |
| MS.gene57369.t1 | AT3G60130 | 50.276 | 362 | 146 | 5 | 103 | 437 | 40 | 394 | 5.56e-123 | 365 |
| MS.gene57369.t1 | AT3G18070 | 43.735 | 423 | 199 | 7 | 40 | 437 | 29 | 437 | 1.94e-122 | 365 |
| MS.gene57369.t1 | AT3G18070 | 43.972 | 423 | 204 | 7 | 40 | 437 | 29 | 443 | 8.22e-122 | 363 |
| MS.gene57369.t1 | AT2G44480 | 54.019 | 311 | 118 | 1 | 29 | 314 | 54 | 364 | 8.19e-120 | 355 |
| MS.gene57369.t1 | AT2G32860 | 42.623 | 427 | 215 | 4 | 40 | 438 | 93 | 517 | 2.88e-119 | 361 |
| MS.gene57369.t1 | AT3G09260 | 43.192 | 426 | 210 | 6 | 40 | 437 | 34 | 455 | 4.05e-119 | 358 |
| MS.gene57369.t1 | AT2G32860 | 42.857 | 427 | 213 | 5 | 40 | 438 | 93 | 516 | 5.58e-119 | 360 |
| MS.gene57369.t1 | AT1G66280 | 43.319 | 464 | 218 | 11 | 7 | 437 | 4 | 455 | 1.45e-118 | 356 |
| MS.gene57369.t1 | AT1G61820 | 41.357 | 457 | 233 | 7 | 9 | 438 | 4 | 452 | 4.91e-118 | 355 |
| MS.gene57369.t1 | AT1G75940 | 44.676 | 432 | 198 | 8 | 41 | 437 | 37 | 462 | 2.50e-117 | 353 |
| MS.gene57369.t1 | AT3G21370 | 43.537 | 441 | 206 | 9 | 30 | 437 | 26 | 456 | 1.15e-116 | 352 |
| MS.gene57369.t1 | AT1G66270 | 43.115 | 443 | 211 | 8 | 30 | 437 | 19 | 455 | 2.07e-115 | 348 |
| MS.gene57369.t1 | AT5G28510 | 42.212 | 443 | 213 | 8 | 30 | 437 | 30 | 464 | 1.14e-113 | 344 |
| MS.gene57369.t1 | AT3G60130 | 48.619 | 362 | 141 | 6 | 103 | 437 | 40 | 383 | 1.46e-113 | 341 |
| MS.gene57369.t1 | AT1G52400 | 42.630 | 441 | 210 | 9 | 30 | 437 | 30 | 460 | 5.51e-113 | 340 |
| MS.gene57369.t1 | AT1G66270 | 42.889 | 443 | 210 | 9 | 30 | 437 | 19 | 453 | 3.06e-112 | 340 |
| MS.gene57369.t1 | AT1G52400 | 42.630 | 441 | 210 | 9 | 30 | 437 | 30 | 460 | 5.05e-112 | 340 |
| MS.gene57369.t1 | AT1G52400 | 42.630 | 441 | 210 | 9 | 30 | 437 | 30 | 460 | 5.05e-112 | 340 |
| MS.gene57369.t1 | AT2G44470 | 42.677 | 396 | 191 | 7 | 14 | 381 | 7 | 394 | 2.39e-111 | 333 |
| MS.gene57369.t1 | AT1G02850 | 41.570 | 433 | 201 | 8 | 36 | 438 | 21 | 431 | 3.83e-110 | 333 |
| MS.gene57369.t1 | AT5G48375 | 44.501 | 391 | 180 | 9 | 25 | 402 | 22 | 388 | 8.76e-110 | 331 |
| MS.gene57369.t1 | AT4G27830 | 40.625 | 448 | 216 | 8 | 18 | 438 | 6 | 430 | 3.83e-109 | 332 |
| MS.gene57369.t1 | AT1G61810 | 42.118 | 425 | 217 | 6 | 41 | 438 | 33 | 455 | 4.95e-109 | 332 |
| MS.gene57369.t1 | AT1G61810 | 42.118 | 425 | 217 | 6 | 41 | 438 | 33 | 455 | 7.44e-109 | 332 |
| MS.gene57369.t1 | AT5G54570 | 45.787 | 356 | 165 | 2 | 109 | 438 | 1 | 354 | 1.01e-107 | 325 |
| MS.gene57369.t1 | AT1G02850 | 39.693 | 456 | 200 | 9 | 36 | 438 | 21 | 454 | 1.97e-105 | 322 |
| MS.gene57369.t1 | AT1G02850 | 40.402 | 448 | 192 | 9 | 36 | 430 | 21 | 446 | 2.75e-105 | 322 |
| MS.gene57369.t1 | AT1G02850 | 41.905 | 420 | 175 | 8 | 36 | 402 | 21 | 424 | 2.95e-105 | 319 |
| MS.gene57369.t1 | AT4G21760 | 39.159 | 452 | 240 | 6 | 15 | 438 | 25 | 469 | 1.04e-104 | 321 |
| MS.gene57369.t1 | AT4G27820 | 41.218 | 427 | 203 | 7 | 40 | 438 | 22 | 428 | 1.56e-103 | 317 |
| MS.gene57369.t1 | AT1G61810 | 43.188 | 389 | 192 | 6 | 41 | 402 | 33 | 419 | 3.86e-103 | 313 |
| MS.gene57369.t1 | AT3G62750 | 38.902 | 437 | 226 | 8 | 21 | 438 | 31 | 445 | 8.13e-103 | 314 |
| MS.gene57369.t1 | AT3G62750 | 38.991 | 436 | 225 | 8 | 22 | 438 | 6 | 419 | 1.05e-102 | 315 |
| MS.gene57369.t1 | AT3G62750 | 38.991 | 436 | 225 | 8 | 22 | 438 | 32 | 445 | 2.24e-102 | 315 |
| MS.gene57369.t1 | AT4G22100 | 39.211 | 431 | 218 | 8 | 34 | 438 | 16 | 428 | 6.27e-101 | 310 |
| MS.gene57369.t1 | AT3G62740 | 37.844 | 436 | 227 | 8 | 25 | 437 | 9 | 423 | 3.38e-100 | 306 |
| MS.gene57369.t1 | AT2G44450 | 48.675 | 302 | 122 | 4 | 162 | 437 | 1 | 295 | 7.56e-100 | 302 |
| MS.gene57369.t1 | AT3G62740 | 37.844 | 436 | 227 | 8 | 25 | 437 | 9 | 423 | 2.70e-99 | 306 |
| MS.gene57369.t1 | AT3G18070 | 45.029 | 342 | 157 | 6 | 41 | 357 | 30 | 365 | 6.65e-99 | 301 |
| MS.gene57369.t1 | AT4G21760 | 38.274 | 452 | 234 | 7 | 15 | 438 | 25 | 459 | 6.85e-99 | 306 |
| MS.gene57369.t1 | AT1G60090 | 37.116 | 423 | 223 | 6 | 41 | 438 | 24 | 428 | 9.11e-98 | 302 |
| MS.gene57369.t1 | AT1G02850 | 39.492 | 433 | 183 | 9 | 36 | 438 | 21 | 404 | 1.21e-97 | 301 |
| MS.gene57369.t1 | AT1G60090 | 38.601 | 386 | 195 | 5 | 41 | 401 | 24 | 392 | 4.05e-95 | 295 |
| MS.gene57369.t1 | AT3G62750 | 42.169 | 332 | 166 | 4 | 22 | 336 | 6 | 328 | 1.25e-94 | 290 |
| MS.gene57369.t1 | AT3G62750 | 42.169 | 332 | 166 | 4 | 22 | 336 | 6 | 328 | 1.25e-94 | 290 |
| MS.gene57369.t1 | AT1G45191 | 37.736 | 424 | 213 | 7 | 42 | 438 | 30 | 429 | 3.17e-94 | 293 |
| MS.gene57369.t1 | AT1G60270 | 41.349 | 341 | 169 | 3 | 41 | 356 | 24 | 358 | 4.43e-94 | 288 |
| MS.gene57369.t1 | AT3G62750 | 42.042 | 333 | 167 | 4 | 21 | 336 | 31 | 354 | 1.94e-93 | 289 |
| MS.gene57369.t1 | AT1G45191 | 37.736 | 424 | 224 | 6 | 42 | 438 | 30 | 440 | 2.87e-93 | 291 |
| MS.gene57369.t1 | AT1G51490 | 44.928 | 345 | 153 | 8 | 50 | 369 | 29 | 361 | 6.05e-93 | 286 |
| MS.gene57369.t1 | AT1G45191 | 36.967 | 422 | 225 | 5 | 42 | 438 | 30 | 435 | 1.92e-92 | 288 |
| MS.gene57369.t1 | AT1G45191 | 37.355 | 431 | 228 | 7 | 42 | 438 | 30 | 452 | 9.60e-92 | 287 |
| MS.gene57369.t1 | AT1G45191 | 39.193 | 347 | 179 | 3 | 42 | 363 | 30 | 369 | 3.79e-87 | 272 |
| MS.gene57369.t1 | AT1G45191 | 38.674 | 362 | 188 | 4 | 42 | 376 | 30 | 384 | 1.19e-86 | 271 |
| MS.gene57369.t1 | AT4G27830 | 40.616 | 357 | 170 | 6 | 109 | 438 | 1 | 342 | 7.24e-83 | 261 |
| MS.gene57369.t1 | AT1G61810 | 40.336 | 357 | 184 | 6 | 109 | 438 | 1 | 355 | 3.92e-81 | 256 |
| MS.gene57369.t1 | AT1G61810 | 46.097 | 269 | 119 | 3 | 41 | 284 | 33 | 300 | 6.42e-80 | 249 |
| MS.gene57369.t1 | AT4G27820 | 39.944 | 358 | 172 | 6 | 109 | 438 | 1 | 343 | 5.95e-78 | 248 |
| MS.gene57369.t1 | AT4G27820 | 39.944 | 358 | 172 | 6 | 109 | 438 | 1 | 343 | 5.95e-78 | 248 |
| MS.gene57369.t1 | AT3G62750 | 37.822 | 349 | 183 | 6 | 109 | 438 | 1 | 334 | 6.28e-75 | 240 |
| MS.gene57369.t1 | AT3G62750 | 37.822 | 349 | 183 | 6 | 109 | 438 | 1 | 334 | 6.28e-75 | 240 |
| MS.gene57369.t1 | AT2G44460 | 43.791 | 306 | 141 | 5 | 160 | 437 | 1 | 303 | 8.17e-73 | 235 |
| MS.gene57369.t1 | AT2G44480 | 47.964 | 221 | 113 | 1 | 217 | 437 | 30 | 248 | 2.60e-70 | 225 |
| MS.gene57369.t1 | AT1G61820 | 38.585 | 311 | 163 | 5 | 155 | 438 | 4 | 313 | 1.54e-67 | 220 |
| MS.gene57369.t1 | AT1G60270 | 39.927 | 273 | 137 | 2 | 109 | 356 | 1 | 271 | 1.58e-66 | 214 |
| MS.gene57369.t1 | AT3G18070 | 40.217 | 276 | 137 | 4 | 187 | 437 | 94 | 366 | 1.07e-64 | 214 |
| MS.gene57369.t1 | AT3G18070 | 54.688 | 64 | 28 | 1 | 40 | 103 | 29 | 91 | 4.66e-15 | 77.0 |
| MS.gene57369.t1 | AT3G18070 | 43.439 | 221 | 122 | 2 | 217 | 437 | 37 | 254 | 2.88e-60 | 199 |
| MS.gene57369.t1 | AT3G18070 | 41.322 | 242 | 116 | 3 | 187 | 403 | 94 | 334 | 7.78e-59 | 196 |
| MS.gene57369.t1 | AT3G18070 | 54.688 | 64 | 28 | 1 | 40 | 103 | 29 | 91 | 2.69e-15 | 77.4 |
| MS.gene57369.t1 | AT3G18070 | 45.455 | 187 | 101 | 1 | 217 | 403 | 37 | 222 | 1.25e-54 | 182 |
| MS.gene57369.t1 | AT5G16580 | 34.672 | 274 | 146 | 5 | 187 | 438 | 27 | 289 | 7.32e-46 | 161 |
Find 90 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCAACTTACATAATATT+AGG | 0.191120 | 4.4:-39846307 | None:intergenic |
| GTGGAAGAGGACAAAGTATT+TGG | 0.192835 | 4.4:+39844379 | MS.gene57369:CDS |
| TTGATTTACATAACAGAAAA+TGG | 0.216843 | 4.4:+39847616 | MS.gene57369:CDS |
| GAGCAGTCTAAGATGCTTAT+TGG | 0.240397 | 4.4:+39847122 | MS.gene57369:CDS |
| TGGCATCAGGCTTCTCAAAA+TGG | 0.265050 | 4.4:+39846782 | MS.gene57369:intron |
| TTATTACTTGGCAATATTCT+TGG | 0.269887 | 4.4:-39845899 | None:intergenic |
| GTAACAGCTGCTGCCATTAT+TGG | 0.270052 | 4.4:-39844000 | None:intergenic |
| TGGTATATTGGAAGCATAAT+TGG | 0.270855 | 4.4:-39847180 | None:intergenic |
| CGTGCTCTTGATTTCATGTT+TGG | 0.298768 | 4.4:+39846881 | MS.gene57369:CDS |
| ATTATTTGATTGTGGTATAT+TGG | 0.312657 | 4.4:-39847192 | None:intergenic |
| TAGCTCCTTTGTTCCAATAA+TGG | 0.326020 | 4.4:+39843987 | MS.gene57369:CDS |
| ATCAATGAGCTACTTGATAA+TGG | 0.365239 | 4.4:+39846087 | MS.gene57369:CDS |
| CATCAATATTTCCTCTACTT+TGG | 0.365921 | 4.4:+39843946 | MS.gene57369:CDS |
| TGAGCCACACTCTTACAGTT+TGG | 0.367434 | 4.4:+39846603 | MS.gene57369:CDS |
| GCTTCTCAAAATGGTTCAAT+AGG | 0.392323 | 4.4:+39846791 | MS.gene57369:CDS |
| ATGCAACTTACATAATATTA+GGG | 0.399717 | 4.4:-39846306 | None:intergenic |
| ACGAAAGACACCATGCTTGA+TGG | 0.404375 | 4.4:-39847071 | None:intergenic |
| CATGAAATCAAGAGCACGTT+CGG | 0.407930 | 4.4:-39846876 | None:intergenic |
| GTACTCGTCTTGTAGCGCTT+GGG | 0.413064 | 4.4:-39846269 | None:intergenic |
| GAGCCACACTCTTACAGTTT+GGG | 0.414537 | 4.4:+39846604 | MS.gene57369:CDS |
| TGGAAGAGGACAAAGTATTT+GGG | 0.414779 | 4.4:+39844380 | MS.gene57369:CDS |
| TCGGTGTTGCACCTGATGAT+TGG | 0.418117 | 4.4:-39846695 | None:intergenic |
| GGGGAAGATCCCAGTGGAAA+AGG | 0.421057 | 4.4:-39846249 | None:intergenic |
| TTACTCACCCTTGGTCCAAT+TGG | 0.424891 | 4.4:-39847407 | None:intergenic |
| TACAAAACGCACCTGGTAAG+AGG | 0.428857 | 4.4:-39844100 | None:intergenic |
| TGATCAGTATCATCGTTATA+AGG | 0.429927 | 4.4:+39845611 | MS.gene57369:CDS |
| TGTACTCGTCTTGTAGCGCT+TGG | 0.432452 | 4.4:-39846270 | None:intergenic |
| GAGCTATGCTTCAAGGAATT+CGG | 0.432941 | 4.4:+39846550 | MS.gene57369:CDS |
| GACTGCTCTCTGGTGAACTT+TGG | 0.446094 | 4.4:-39847107 | None:intergenic |
| CTATGCCGAGCTATGCTTCA+AGG | 0.457568 | 4.4:+39846543 | MS.gene57369:CDS |
| GAGCGTAACGGGATACCAAT+TGG | 0.457796 | 4.4:+39847392 | MS.gene57369:CDS |
| TTTATGCAGCCACTGACAAC+AGG | 0.464763 | 4.4:+39847041 | MS.gene57369:CDS |
| AGCAGTTCTTGAATCCCTCT+TGG | 0.465436 | 4.4:-39847562 | None:intergenic |
| CAAAGTAGAGGAAATATTGA+TGG | 0.467715 | 4.4:-39843945 | None:intergenic |
| CATACAGATTCTCTATCTCT+TGG | 0.469897 | 4.4:+39845876 | MS.gene57369:CDS |
| TTTGGGTACGGAACCTTACA+TGG | 0.476476 | 4.4:+39846621 | MS.gene57369:CDS |
| ATCACTTGAAGAGGCACTCA+TGG | 0.486552 | 4.4:+39848100 | MS.gene57369:CDS |
| ATCAAGCATGGTGTCTTTCG+TGG | 0.490440 | 4.4:+39847073 | MS.gene57369:CDS |
| GTACGGTCAACAAGTGTTGT+AGG | 0.490892 | 4.4:-39844024 | None:intergenic |
| TGGTTGTGTGAGGCCATGTA+AGG | 0.493958 | 4.4:-39846634 | None:intergenic |
| CACAAGGGCATGGCATTCAA+TGG | 0.496087 | 4.4:+39843922 | None:intergenic |
| GGCTATTTGTTTATCCAAGA+GGG | 0.499794 | 4.4:+39847548 | MS.gene57369:CDS |
| TCGGAGACAGAGTGAAGCAT+TGG | 0.500114 | 4.4:+39846569 | MS.gene57369:CDS |
| GCATCACCTTAAATTGTCAC+TGG | 0.506655 | 4.4:+39846813 | MS.gene57369:CDS |
| TACTGCCTCATCCTCTTACC+AGG | 0.507287 | 4.4:+39844089 | MS.gene57369:CDS |
| TGAGTATCCTTGAAATATCC+AGG | 0.513235 | 4.4:-39847227 | None:intergenic |
| GGGAAGATCCCAGTGGAAAA+GGG | 0.516334 | 4.4:-39846248 | None:intergenic |
| GTAAGAGTGTGGCTCATTGA+GGG | 0.516603 | 4.4:-39846596 | None:intergenic |
| CTCTTGATTTCATGTTTGGA+TGG | 0.519547 | 4.4:+39846885 | MS.gene57369:CDS |
| AAAATATTGGATAGAAGCAA+TGG | 0.520670 | 4.4:+39845576 | MS.gene57369:CDS |
| ACGCACCTGGTAAGAGGATG+AGG | 0.521862 | 4.4:-39844094 | None:intergenic |
| AATAATGACACAAGCACACC+TGG | 0.522457 | 4.4:+39847209 | MS.gene57369:CDS |
| GCTGCAAATGAAGGTGGAAG+AGG | 0.523453 | 4.4:+39844366 | MS.gene57369:CDS |
| AAGCATCTTAGACTGCTCTC+TGG | 0.526279 | 4.4:-39847117 | None:intergenic |
| AAGCACACCTGGATATTTCA+AGG | 0.530555 | 4.4:+39847220 | MS.gene57369:CDS |
| CAGCTGCATGAGCAAGGAGT+TGG | 0.531565 | 4.4:-39846654 | None:intergenic |
| ACTTTATAGAACCAATCATC+AGG | 0.533812 | 4.4:+39846684 | MS.gene57369:CDS |
| TGTAAGAGTGTGGCTCATTG+AGG | 0.538006 | 4.4:-39846597 | None:intergenic |
| TACTCGTCTTGTAGCGCTTG+GGG | 0.539586 | 4.4:-39846268 | None:intergenic |
| CAGTGGAAAAGGGTCACAAA+TGG | 0.545800 | 4.4:-39846238 | None:intergenic |
| CTTGTGTCATTATTTGATTG+TGG | 0.555807 | 4.4:-39847200 | None:intergenic |
| TGACAGCAGCTGCATGAGCA+AGG | 0.559687 | 4.4:-39846660 | None:intergenic |
| AAATATGCTCATGAACATCC+AGG | 0.571960 | 4.4:+39844405 | MS.gene57369:CDS |
| GTGTTGATAATGTAGTATGA+AGG | 0.577599 | 4.4:+39844342 | MS.gene57369:intron |
| TGCTGCCATTATTGGAACAA+AGG | 0.578034 | 4.4:-39843992 | None:intergenic |
| TATGAAGGTGCTGCAAATGA+AGG | 0.579768 | 4.4:+39844357 | MS.gene57369:CDS |
| GCAGAAGGAAAAGTAAGTGC+AGG | 0.581251 | 4.4:+39846027 | MS.gene57369:intron |
| TATATTGGAAGCATAATTGG+AGG | 0.589479 | 4.4:-39847177 | None:intergenic |
| AACCATTAGGAAAACTACTA+CGG | 0.590332 | 4.4:-39844056 | None:intergenic |
| TCCAACGCTATCACTTGAAG+AGG | 0.591945 | 4.4:+39848091 | MS.gene57369:CDS |
| TGGCTATTTGTTTATCCAAG+AGG | 0.593511 | 4.4:+39847547 | MS.gene57369:CDS |
| GCCTCTTCAAGTGATAGCGT+TGG | 0.596017 | 4.4:-39848092 | None:intergenic |
| ACACTCTTACAGTTTGGGTA+CGG | 0.597858 | 4.4:+39846609 | MS.gene57369:CDS |
| TCAAGCATGGTGTCTTTCGT+GGG | 0.598348 | 4.4:+39847074 | MS.gene57369:CDS |
| GGATACTCTCCTGTTGTCAG+TGG | 0.600363 | 4.4:-39847050 | None:intergenic |
| GAATTCCTTGAAGCATAGCT+CGG | 0.603333 | 4.4:-39846548 | None:intergenic |
| CGGGATACCAATTGGACCAA+GGG | 0.607534 | 4.4:+39847400 | MS.gene57369:CDS |
| TTATGTAGGCTGCTTCACCT+TGG | 0.615550 | 4.4:+39847527 | MS.gene57369:intron |
| AGTGCAGGTATAAATCAAGA+AGG | 0.620837 | 4.4:+39846042 | MS.gene57369:CDS |
| AATTCAAGACACCAAAGTAG+AGG | 0.621817 | 4.4:-39843957 | None:intergenic |
| CTTGGATAAACAAATAGCCA+AGG | 0.631378 | 4.4:-39847544 | None:intergenic |
| TACTACGGTTTAGAGAAGTA+CGG | 0.651396 | 4.4:-39844041 | None:intergenic |
| AGGAGAGTATCCATCAAGCA+TGG | 0.653040 | 4.4:+39847061 | MS.gene57369:CDS |
| GAAGGTGCTGCAAATGAAGG+TGG | 0.659790 | 4.4:+39844360 | MS.gene57369:CDS |
| AGCAAGGAGTTGGTTGTGTG+AGG | 0.661595 | 4.4:-39846644 | None:intergenic |
| ACGGGATACCAATTGGACCA+AGG | 0.664320 | 4.4:+39847399 | MS.gene57369:CDS |
| GTACCCAAACTGTAAGAGTG+TGG | 0.677255 | 4.4:-39846607 | None:intergenic |
| TCTAACGTGTCATTTGAGAA+CGG | 0.686339 | 4.4:-39846842 | None:intergenic |
| GCGCTACAAGACGAGTACAG+CGG | 0.733888 | 4.4:+39846274 | MS.gene57369:CDS |
| GCGCTTGGGGAAGATCCCAG+TGG | 0.736847 | 4.4:-39846255 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAACTTAA+AGG | - | chr4.4:39844855-39844874 | None:intergenic | 10.0% |
| !!! | AAAAAGCAAAAATAAATTTT+AGG | + | chr4.4:39844875-39844894 | MS.gene57369:intron | 10.0% |
| !!! | AAAATATTTTACATCAAATT+AGG | - | chr4.4:39847351-39847370 | None:intergenic | 10.0% |
| !!! | ATTTTGTTTGTTAAAAAAAA+GGG | + | chr4.4:39844824-39844843 | MS.gene57369:intron | 10.0% |
| !!! | TATTTTGTTTGTTAAAAAAA+AGG | + | chr4.4:39844823-39844842 | MS.gene57369:intron | 10.0% |
| !!! | TTTTTTTTTTTTTAAGAGAT+AGG | + | chr4.4:39847884-39847903 | MS.gene57369:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGAGA+TGG | + | chr4.4:39847883-39847902 | MS.gene57369:intron | 10.0% |
| !! | AAATTGAGATAATTAAAGAA+AGG | - | chr4.4:39844455-39844474 | None:intergenic | 15.0% |
| !! | ACATGATTATATATCTTAAA+TGG | + | chr4.4:39845377-39845396 | MS.gene57369:intron | 15.0% |
| !! | ATCTTAACGAAAATTAATTA+TGG | - | chr4.4:39844947-39844966 | None:intergenic | 15.0% |
| !! | TCTTAACGAAAATTAATTAT+GGG | - | chr4.4:39844946-39844965 | None:intergenic | 15.0% |
| !! | TTAATAACTAAATTTAGGTA+TGG | + | chr4.4:39848055-39848074 | MS.gene57369:intron | 15.0% |
| !! | TTCCTATTAAAATGTAAAAA+TGG | - | chr4.4:39845822-39845841 | None:intergenic | 15.0% |
| !! | TTTCTTTAATTATCTCAATT+TGG | + | chr4.4:39844454-39844473 | MS.gene57369:intron | 15.0% |
| !!! | AACCATTTTTACATTTTAAT+AGG | + | chr4.4:39845817-39845836 | MS.gene57369:intron | 15.0% |
| !!! | ATAAGTGATATTTTATGTAT+TGG | + | chr4.4:39844594-39844613 | MS.gene57369:intron | 15.0% |
| !!! | ATATATCTAAAGTTAGTTAT+TGG | + | chr4.4:39847700-39847719 | MS.gene57369:intron | 15.0% |
| !!! | CAAATTGATTTTTTTATCAA+TGG | - | chr4.4:39847317-39847336 | None:intergenic | 15.0% |
| !!! | CAAGTTATTTTATTTTTGAA+GGG | - | chr4.4:39844504-39844523 | None:intergenic | 15.0% |
| !!! | TAAATAGGATTTTAAATTAC+AGG | - | chr4.4:39846967-39846986 | None:intergenic | 15.0% |
| !!! | TATATTCCTTTAACTTTTTT+TGG | - | chr4.4:39845446-39845465 | None:intergenic | 15.0% |
| !!! | TCAAGTTATTTTATTTTTGA+AGG | - | chr4.4:39844505-39844524 | None:intergenic | 15.0% |
| !! | AAACAAAGAACTATATATGT+GGG | + | chr4.4:39845419-39845438 | MS.gene57369:intron | 20.0% |
| !! | AAGCAATAATAATAAATCGA+TGG | + | chr4.4:39846346-39846365 | MS.gene57369:intron | 20.0% |
| !! | AATCATAACAAATACAAGAA+AGG | - | chr4.4:39846732-39846751 | None:intergenic | 20.0% |
| !! | AATTGAAGCTTAAGAAATAT+TGG | + | chr4.4:39844293-39844312 | MS.gene57369:intron | 20.0% |
| !! | AGAAAAAAAAGAAATATACC+TGG | - | chr4.4:39844426-39844445 | None:intergenic | 20.0% |
| !! | ATCATGGTAATATAAATTGA+TGG | + | chr4.4:39846193-39846212 | MS.gene57369:intron | 20.0% |
| !! | ATCTCATACAGAAAAAATAT+TGG | + | chr4.4:39845563-39845582 | MS.gene57369:intron | 20.0% |
| !! | ATGCAACTTACATAATATTA+GGG | - | chr4.4:39846309-39846328 | None:intergenic | 20.0% |
| !! | ATTATTTGATTGTGGTATAT+TGG | - | chr4.4:39847195-39847214 | None:intergenic | 20.0% |
| !! | CAAACAAAATATTATTGATC+AGG | - | chr4.4:39844814-39844833 | None:intergenic | 20.0% |
| !! | GAAATTAACAAGTAAAACAT+CGG | - | chr4.4:39846495-39846514 | None:intergenic | 20.0% |
| !! | TATAGATAAAATGAAACTCT+AGG | - | chr4.4:39845960-39845979 | None:intergenic | 20.0% |
| !! | TCAAACCTTAATTAAAATGT+AGG | - | chr4.4:39845310-39845329 | None:intergenic | 20.0% |
| !! | TGCATATTGTAAAAATCAAA+TGG | - | chr4.4:39847659-39847678 | None:intergenic | 20.0% |
| !! | TTAATGTAGTAATTGCTTAT+TGG | + | chr4.4:39845536-39845555 | MS.gene57369:intron | 20.0% |
| !! | TTGATTTACATAACAGAAAA+TGG | + | chr4.4:39847616-39847635 | MS.gene57369:CDS | 20.0% |
| !!! | AAACATACATTAGATGATTT+TGG | - | chr4.4:39844167-39844186 | None:intergenic | 20.0% |
| !!! | AATTTTTTGTCTAGTTTATG+TGG | + | chr4.4:39845793-39845812 | MS.gene57369:intron | 20.0% |
| !!! | ACATATATAGTTCTTTGTTT+GGG | - | chr4.4:39845419-39845438 | None:intergenic | 20.0% |
| !!! | ACCTTAAATTTTCATACATT+AGG | + | chr4.4:39845256-39845275 | MS.gene57369:intron | 20.0% |
| !!! | ATTATACAATTGATTTGACT+AGG | - | chr4.4:39848024-39848043 | None:intergenic | 20.0% |
| !!! | ATTCAACATTTGTTATTACT+TGG | - | chr4.4:39845914-39845933 | None:intergenic | 20.0% |
| !!! | ATTGGTTCATTTGATTTTAT+TGG | + | chr4.4:39847140-39847159 | MS.gene57369:CDS | 20.0% |
| !!! | CATAACCTACATTTTAATTA+AGG | + | chr4.4:39845302-39845321 | MS.gene57369:intron | 20.0% |
| !!! | CATTTTAACTCTGATTTTTT+TGG | + | chr4.4:39845068-39845087 | MS.gene57369:intron | 20.0% |
| !!! | TAGAGTTTCATTTTATCTAT+AGG | + | chr4.4:39845959-39845978 | MS.gene57369:intron | 20.0% |
| !!! | TGCTTTTATATCAATCAAAT+TGG | - | chr4.4:39845642-39845661 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTATGTAAATCAA+AGG | - | chr4.4:39847616-39847635 | None:intergenic | 20.0% |
| ! | AAAATATTGGATAGAAGCAA+TGG | + | chr4.4:39845576-39845595 | MS.gene57369:CDS | 25.0% |
| ! | AAACAAACTAATGAAGTCAT+CGG | - | chr4.4:39845048-39845067 | None:intergenic | 25.0% |
| ! | AAACTCTAGGTGAATTAAAA+TGG | - | chr4.4:39845947-39845966 | None:intergenic | 25.0% |
| ! | AAGAATCAAACAATGTATTG+AGG | - | chr4.4:39847992-39848011 | None:intergenic | 25.0% |
| ! | ACAAATACAAGAAAGGTTTA+TGG | - | chr4.4:39846725-39846744 | None:intergenic | 25.0% |
| ! | AGAATCAAACAATGTATTGA+GGG | - | chr4.4:39847991-39848010 | None:intergenic | 25.0% |
| ! | ATGGTAATATAAATTGATGG+AGG | + | chr4.4:39846196-39846215 | MS.gene57369:intron | 25.0% |
| ! | CAAAATAGAGTACATGAATA+CGG | - | chr4.4:39844698-39844717 | None:intergenic | 25.0% |
| ! | CAAAATATTAGAGCTTCATA+AGG | - | chr4.4:39845768-39845787 | None:intergenic | 25.0% |
| ! | CAAACAAAGAACTATATATG+TGG | + | chr4.4:39845418-39845437 | MS.gene57369:intron | 25.0% |
| ! | CACATATATAGTTCTTTGTT+TGG | - | chr4.4:39845420-39845439 | None:intergenic | 25.0% |
| ! | CATGCAACTTACATAATATT+AGG | - | chr4.4:39846310-39846329 | None:intergenic | 25.0% |
| ! | CCATAATCATGCATATAAAT+AGG | - | chr4.4:39846982-39847001 | None:intergenic | 25.0% |
| ! | CCTATTTATATGCATGATTA+TGG | + | chr4.4:39846979-39846998 | MS.gene57369:intron | 25.0% |
| ! | CTAAATGATGTTCATAATCA+TGG | + | chr4.4:39846177-39846196 | MS.gene57369:intron | 25.0% |
| ! | CTAATATTATGTAAGTTGCA+TGG | + | chr4.4:39846308-39846327 | MS.gene57369:intron | 25.0% |
| ! | CTTTAACTAACTCGAATTAA+TGG | + | chr4.4:39846762-39846781 | MS.gene57369:intron | 25.0% |
| ! | GCCTAATGTATGAAAATTTA+AGG | - | chr4.4:39845260-39845279 | None:intergenic | 25.0% |
| ! | TATTGAGGGTAAAAAAGATT+AGG | - | chr4.4:39847977-39847996 | None:intergenic | 25.0% |
| ! | TCAGTATACGATTGTATAAA+TGG | - | chr4.4:39847497-39847516 | None:intergenic | 25.0% |
| ! | TTATTACTTGGCAATATTCT+TGG | - | chr4.4:39845902-39845921 | None:intergenic | 25.0% |
| ! | TTTAACCCTATTGTTATATG+TGG | + | chr4.4:39845018-39845037 | MS.gene57369:intron | 25.0% |
| !! | AATTTTCATTCTTAAGAGAG+AGG | + | chr4.4:39847850-39847869 | MS.gene57369:intron | 25.0% |
| !! | TCGAGTTAGTTAAAGTTTTT+CGG | - | chr4.4:39846757-39846776 | None:intergenic | 25.0% |
| !! | TGAAAGTAGTCTTTTTACTT+TGG | + | chr4.4:39845504-39845523 | MS.gene57369:intron | 25.0% |
| !! | TTTCCTAATGGTTTCATTTT+TGG | + | chr4.4:39844066-39844085 | MS.gene57369:CDS | 25.0% |
| !!! | ACTTTAAGACCAAAGATTTA+GGG | + | chr4.4:39844254-39844273 | MS.gene57369:intron | 25.0% |
| !!! | ATATTGGAGGTTAATTTGTA+AGG | + | chr4.4:39844309-39844328 | MS.gene57369:intron | 25.0% |
| !!! | ATGTTATTTCAATTCCTCAT+AGG | - | chr4.4:39847290-39847309 | None:intergenic | 25.0% |
| !!! | TACTTTAAGACCAAAGATTT+AGG | + | chr4.4:39844253-39844272 | MS.gene57369:intron | 25.0% |
| !!! | TTCTTGAAAGACTTTTTTGT+AGG | + | chr4.4:39847018-39847037 | MS.gene57369:intron | 25.0% |
| AACCATTAGGAAAACTACTA+CGG | - | chr4.4:39844059-39844078 | None:intergenic | 30.0% | |
| AAGAAAGGTTTATGGTTCTT+CGG | - | chr4.4:39846717-39846736 | None:intergenic | 30.0% | |
| AAGGTTTGAATTACAACTGA+GGG | + | chr4.4:39845321-39845340 | MS.gene57369:intron | 30.0% | |
| AATATCGCATGAGAAAGAAT+AGG | + | chr4.4:39845220-39845239 | MS.gene57369:intron | 30.0% | |
| AATTGAACCAACTTGACAAA+CGG | - | chr4.4:39844989-39845008 | None:intergenic | 30.0% | |
| ACTTTATAGAACCAATCATC+AGG | + | chr4.4:39846684-39846703 | MS.gene57369:CDS | 30.0% | |
| ATCAATGAGCTACTTGATAA+TGG | + | chr4.4:39846087-39846106 | MS.gene57369:CDS | 30.0% | |
| ATGAGAAAGAATAGGAATTG+GGG | + | chr4.4:39845228-39845247 | MS.gene57369:intron | 30.0% | |
| ATGTAGCTTATAAGTGGAAA+AGG | + | chr4.4:39844561-39844580 | MS.gene57369:intron | 30.0% | |
| CAAAAACCAGTGACAATTTA+AGG | - | chr4.4:39846822-39846841 | None:intergenic | 30.0% | |
| CAAAGTAGAGGAAATATTGA+TGG | - | chr4.4:39843948-39843967 | None:intergenic | 30.0% | |
| CATCAATATTTCCTCTACTT+TGG | + | chr4.4:39843946-39843965 | MS.gene57369:CDS | 30.0% | |
| CATGAGAAAGAATAGGAATT+GGG | + | chr4.4:39845227-39845246 | MS.gene57369:intron | 30.0% | |
| GATAGTATGTAGCTTATAAG+TGG | + | chr4.4:39844555-39844574 | MS.gene57369:intron | 30.0% | |
| GATCAAATACTTGTGAAACA+TGG | - | chr4.4:39846127-39846146 | None:intergenic | 30.0% | |
| GTACCAAAAATGAAACCATT+AGG | - | chr4.4:39844072-39844091 | None:intergenic | 30.0% | |
| TAAGGTTTGAATTACAACTG+AGG | + | chr4.4:39845320-39845339 | MS.gene57369:intron | 30.0% | |
| TGAAGCTTAAGAAATATTGG+AGG | + | chr4.4:39844296-39844315 | MS.gene57369:intron | 30.0% | |
| TGATCAGTATCATCGTTATA+AGG | + | chr4.4:39845611-39845630 | MS.gene57369:CDS | 30.0% | |
| TGTAGCTTATAAGTGGAAAA+GGG | + | chr4.4:39844562-39844581 | MS.gene57369:intron | 30.0% | |
| TGTAGTCATAATACTTATGC+TGG | + | chr4.4:39844743-39844762 | MS.gene57369:intron | 30.0% | |
| ! | AAAATTTTACAAAACGCACC+TGG | - | chr4.4:39844110-39844129 | None:intergenic | 30.0% |
| ! | CAATTTGGTGAATAATAGCT+TGG | + | chr4.4:39844469-39844488 | MS.gene57369:intron | 30.0% |
| ! | CATATGCAGAAAAGATTTTC+AGG | + | chr4.4:39846519-39846538 | MS.gene57369:intron | 30.0% |
| ! | CTTGTGTCATTATTTGATTG+TGG | - | chr4.4:39847203-39847222 | None:intergenic | 30.0% |
| ! | TATATTGGAAGCATAATTGG+AGG | - | chr4.4:39847180-39847199 | None:intergenic | 30.0% |
| ! | TCTAAAGTTAGTTATTGGCT+TGG | + | chr4.4:39847705-39847724 | MS.gene57369:intron | 30.0% |
| ! | TGGTATATTGGAAGCATAAT+TGG | - | chr4.4:39847183-39847202 | None:intergenic | 30.0% |
| !! | CTAAAGTTAGTTATTGGCTT+GGG | + | chr4.4:39847706-39847725 | MS.gene57369:intron | 30.0% |
| !! | GTGTTGATAATGTAGTATGA+AGG | + | chr4.4:39844342-39844361 | MS.gene57369:intron | 30.0% |
| !! | TTTATGTATTGGTCTTGTTC+TGG | + | chr4.4:39844605-39844624 | MS.gene57369:intron | 30.0% |
| AAACCATATATCCTCATGTG+GGG | - | chr4.4:39846467-39846486 | None:intergenic | 35.0% | |
| AAACGTCATAGTTAAGCGAT+TGG | - | chr4.4:39844914-39844933 | None:intergenic | 35.0% | |
| AAATATGCTCATGAACATCC+AGG | + | chr4.4:39844405-39844424 | MS.gene57369:CDS | 35.0% | |
| AATTCAAGACACCAAAGTAG+AGG | - | chr4.4:39843960-39843979 | None:intergenic | 35.0% | |
| AGTGCAGGTATAAATCAAGA+AGG | + | chr4.4:39846042-39846061 | MS.gene57369:CDS | 35.0% | |
| CATACAGATTCTCTATCTCT+TGG | + | chr4.4:39845876-39845895 | MS.gene57369:CDS | 35.0% | |
| CTCTTGATTTCATGTTTGGA+TGG | + | chr4.4:39846885-39846904 | MS.gene57369:CDS | 35.0% | |
| CTTGGATAAACAAATAGCCA+AGG | - | chr4.4:39847547-39847566 | None:intergenic | 35.0% | |
| GAAACCATATATCCTCATGT+GGG | - | chr4.4:39846468-39846487 | None:intergenic | 35.0% | |
| GACAAACGGAGTTAAGTTAT+GGG | - | chr4.4:39844975-39844994 | None:intergenic | 35.0% | |
| GACGTCATAAAGTTCTATCA+TGG | - | chr4.4:39846427-39846446 | None:intergenic | 35.0% | |
| GACTACTTTCAGTAACAACA+TGG | - | chr4.4:39845495-39845514 | None:intergenic | 35.0% | |
| GCAGTTACTGCTATATATCT+GGG | + | chr4.4:39847439-39847458 | MS.gene57369:intron | 35.0% | |
| GCATGAGAAAGAATAGGAAT+TGG | + | chr4.4:39845226-39845245 | MS.gene57369:intron | 35.0% | |
| GCTTCTCAAAATGGTTCAAT+AGG | + | chr4.4:39846791-39846810 | MS.gene57369:CDS | 35.0% | |
| GGCTATTTGTTTATCCAAGA+GGG | + | chr4.4:39847548-39847567 | MS.gene57369:CDS | 35.0% | |
| GTGGACCACATATAACAATA+GGG | - | chr4.4:39845026-39845045 | None:intergenic | 35.0% | |
| GTGGGACCAAAAAAAGTTAA+AGG | + | chr4.4:39845437-39845456 | MS.gene57369:intron | 35.0% | |
| TAACTCGAATTAATGGCATC+AGG | + | chr4.4:39846769-39846788 | MS.gene57369:intron | 35.0% | |
| TAAGACCAAAGATTTAGGGA+TGG | + | chr4.4:39844258-39844277 | MS.gene57369:intron | 35.0% | |
| TACTACGGTTTAGAGAAGTA+CGG | - | chr4.4:39844044-39844063 | None:intergenic | 35.0% | |
| TAGCTCCTTTGTTCCAATAA+TGG | + | chr4.4:39843987-39844006 | MS.gene57369:CDS | 35.0% | |
| TCATTCCATCCCTAAATCTT+TGG | - | chr4.4:39844266-39844285 | None:intergenic | 35.0% | |
| TGAAACCATATATCCTCATG+TGG | - | chr4.4:39846469-39846488 | None:intergenic | 35.0% | |
| TGACAAACGGAGTTAAGTTA+TGG | - | chr4.4:39844976-39844995 | None:intergenic | 35.0% | |
| TGAGTATCCTTGAAATATCC+AGG | - | chr4.4:39847230-39847249 | None:intergenic | 35.0% | |
| TGCAGTTACTGCTATATATC+TGG | + | chr4.4:39847438-39847457 | MS.gene57369:intron | 35.0% | |
| TGGCTATTTGTTTATCCAAG+AGG | + | chr4.4:39847547-39847566 | MS.gene57369:CDS | 35.0% | |
| ! | AACCGTAGTAGTTTTCCTAA+TGG | + | chr4.4:39844054-39844073 | MS.gene57369:CDS | 35.0% |
| ! | TAATCATGTTTGAGACGTGT+CGG | - | chr4.4:39845366-39845385 | None:intergenic | 35.0% |
| ! | TGGAAGAGGACAAAGTATTT+GGG | + | chr4.4:39844380-39844399 | MS.gene57369:CDS | 35.0% |
| !! | ATTGATGGAGGTATTGATAC+AGG | + | chr4.4:39846208-39846227 | MS.gene57369:intron | 35.0% |
| !! | TCTAACGTGTCATTTGAGAA+CGG | - | chr4.4:39846845-39846864 | None:intergenic | 35.0% |
| AAGCACACCTGGATATTTCA+AGG | + | chr4.4:39847220-39847239 | MS.gene57369:CDS | 40.0% | |
| AATAATGACACAAGCACACC+TGG | + | chr4.4:39847209-39847228 | MS.gene57369:CDS | 40.0% | |
| AATAGACAAGAGCTGCACTT+AGG | - | chr4.4:39845172-39845191 | None:intergenic | 40.0% | |
| AATAGAGTCTTACTCACCCT+TGG | - | chr4.4:39847419-39847438 | None:intergenic | 40.0% | |
| AATGTAATTGACCCCACATG+AGG | + | chr4.4:39846453-39846472 | MS.gene57369:intron | 40.0% | |
| ACACTCTTACAGTTTGGGTA+CGG | + | chr4.4:39846609-39846628 | MS.gene57369:CDS | 40.0% | |
| CAAACTAATGAAGTCATCGG+TGG | - | chr4.4:39845045-39845064 | None:intergenic | 40.0% | |
| CACAATGTTCCGCAAAATCA+TGG | + | chr4.4:39846924-39846943 | MS.gene57369:intron | 40.0% | |
| CGTGCTCTTGATTTCATGTT+TGG | + | chr4.4:39846881-39846900 | MS.gene57369:CDS | 40.0% | |
| CTGAGAAACGACACTTATGT+AGG | + | chr4.4:39847513-39847532 | MS.gene57369:intron | 40.0% | |
| CTTAACTCCGTTTGTCAAGT+TGG | + | chr4.4:39844979-39844998 | MS.gene57369:intron | 40.0% | |
| GAATTCCTTGAAGCATAGCT+CGG | - | chr4.4:39846551-39846570 | None:intergenic | 40.0% | |
| GAGCTATGCTTCAAGGAATT+CGG | + | chr4.4:39846550-39846569 | MS.gene57369:CDS | 40.0% | |
| GCATCACCTTAAATTGTCAC+TGG | + | chr4.4:39846813-39846832 | MS.gene57369:CDS | 40.0% | |
| GGTGGACCACATATAACAAT+AGG | - | chr4.4:39845027-39845046 | None:intergenic | 40.0% | |
| GTTTGAATTACAACTGAGGG+AGG | + | chr4.4:39845324-39845343 | MS.gene57369:intron | 40.0% | |
| TGCACTTAGGAGATGAGAAA+TGG | - | chr4.4:39845159-39845178 | None:intergenic | 40.0% | |
| TGCTGCCATTATTGGAACAA+AGG | - | chr4.4:39843995-39844014 | None:intergenic | 40.0% | |
| ! | AGCTCTAACAAACATGCAGA+AGG | + | chr4.4:39846012-39846031 | MS.gene57369:intron | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+AGG | + | chr4.4:39847766-39847785 | MS.gene57369:intron | 40.0% |
| ! | ATTTGTGACCCTTTTCCACT+GGG | + | chr4.4:39846240-39846259 | MS.gene57369:CDS | 40.0% |
| ! | CATGAAATCAAGAGCACGTT+CGG | - | chr4.4:39846879-39846898 | None:intergenic | 40.0% |
| ! | GAGCAGTCTAAGATGCTTAT+TGG | + | chr4.4:39847122-39847141 | MS.gene57369:CDS | 40.0% |
| ! | GTGGAAGAGGACAAAGTATT+TGG | + | chr4.4:39844379-39844398 | MS.gene57369:CDS | 40.0% |
| ! | TGTCGTGATCCATGATTTTG+CGG | - | chr4.4:39846936-39846955 | None:intergenic | 40.0% |
| !! | GTCTTGTTCTGGAAGTTAGT+AGG | + | chr4.4:39844616-39844635 | MS.gene57369:intron | 40.0% |
| !! | GTTCTGGAAGTTAGTAGGAA+AGG | + | chr4.4:39844621-39844640 | MS.gene57369:intron | 40.0% |
| !! | TAGTTATTGGCTTGGGATCT+GGG | + | chr4.4:39847713-39847732 | MS.gene57369:intron | 40.0% |
| !! | TATGAAGGTGCTGCAAATGA+AGG | + | chr4.4:39844357-39844376 | MS.gene57369:CDS | 40.0% |
| !! | TTAGTTATTGGCTTGGGATC+TGG | + | chr4.4:39847712-39847731 | MS.gene57369:intron | 40.0% |
| AAGCATCTTAGACTGCTCTC+TGG | - | chr4.4:39847120-39847139 | None:intergenic | 45.0% | |
| ACGAAAGACACCATGCTTGA+TGG | - | chr4.4:39847074-39847093 | None:intergenic | 45.0% | |
| AGCAGTTCTTGAATCCCTCT+TGG | - | chr4.4:39847565-39847584 | None:intergenic | 45.0% | |
| ATCAAGCATGGTGTCTTTCG+TGG | + | chr4.4:39847073-39847092 | MS.gene57369:CDS | 45.0% | |
| CAGTGGAAAAGGGTCACAAA+TGG | - | chr4.4:39846241-39846260 | None:intergenic | 45.0% | |
| CCTCATAGGAGTTGTGATCA+AGG | - | chr4.4:39847276-39847295 | None:intergenic | 45.0% | |
| CCTTGATCACAACTCCTATG+AGG | + | chr4.4:39847273-39847292 | MS.gene57369:intron | 45.0% | |
| GAGCCACACTCTTACAGTTT+GGG | + | chr4.4:39846604-39846623 | MS.gene57369:CDS | 45.0% | |
| GCAGAAGGAAAAGTAAGTGC+AGG | + | chr4.4:39846027-39846046 | MS.gene57369:intron | 45.0% | |
| GTAACAGCTGCTGCCATTAT+TGG | - | chr4.4:39844003-39844022 | None:intergenic | 45.0% | |
| GTACCCAAACTGTAAGAGTG+TGG | - | chr4.4:39846610-39846629 | None:intergenic | 45.0% | |
| TACAAAACGCACCTGGTAAG+AGG | - | chr4.4:39844103-39844122 | None:intergenic | 45.0% | |
| TCAAGCATGGTGTCTTTCGT+GGG | + | chr4.4:39847074-39847093 | MS.gene57369:CDS | 45.0% | |
| TCCAACGCTATCACTTGAAG+AGG | + | chr4.4:39848091-39848110 | MS.gene57369:CDS | 45.0% | |
| TGACCCCACATGAGGATATA+TGG | + | chr4.4:39846461-39846480 | MS.gene57369:intron | 45.0% | |
| TGAGCCACACTCTTACAGTT+TGG | + | chr4.4:39846603-39846622 | MS.gene57369:CDS | 45.0% | |
| TGGCATCAGGCTTCTCAAAA+TGG | + | chr4.4:39846782-39846801 | MS.gene57369:intron | 45.0% | |
| TTACTCACCCTTGGTCCAAT+TGG | - | chr4.4:39847410-39847429 | None:intergenic | 45.0% | |
| TTAGGCGACAAATACCTGTC+AGG | + | chr4.4:39845274-39845293 | MS.gene57369:intron | 45.0% | |
| TTATGTAGGCTGCTTCACCT+TGG | + | chr4.4:39847527-39847546 | MS.gene57369:intron | 45.0% | |
| TTTATGCAGCCACTGACAAC+AGG | + | chr4.4:39847041-39847060 | MS.gene57369:CDS | 45.0% | |
| TTTGGGTACGGAACCTTACA+TGG | + | chr4.4:39846621-39846640 | MS.gene57369:CDS | 45.0% | |
| ! | CATTTGTGACCCTTTTCCAC+TGG | + | chr4.4:39846239-39846258 | MS.gene57369:CDS | 45.0% |
| ! | CTTTTGACAGCTGAGCGTAA+CGG | + | chr4.4:39847380-39847399 | MS.gene57369:intron | 45.0% |
| ! | GTAAGAGTGTGGCTCATTGA+GGG | - | chr4.4:39846599-39846618 | None:intergenic | 45.0% |
| ! | GTACGGTCAACAAGTGTTGT+AGG | - | chr4.4:39844027-39844046 | None:intergenic | 45.0% |
| ! | TCACCGGTGTCAATTTAGGT+GGG | + | chr4.4:39847770-39847789 | MS.gene57369:intron | 45.0% |
| ! | TGTAAGAGTGTGGCTCATTG+AGG | - | chr4.4:39846600-39846619 | None:intergenic | 45.0% |
| ! | TTTTGACAGCTGAGCGTAAC+GGG | + | chr4.4:39847381-39847400 | MS.gene57369:intron | 45.0% |
| !! | AGGAGAGTATCCATCAAGCA+TGG | + | chr4.4:39847061-39847080 | MS.gene57369:CDS | 45.0% |
| !! | ATCACTTGAAGAGGCACTCA+TGG | + | chr4.4:39848100-39848119 | MS.gene57369:CDS | 45.0% |
| !! | TGGAGGTATTGATACAGGTC+TGG | + | chr4.4:39846213-39846232 | MS.gene57369:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAGATT+AGG | - | chr4.4:39847941-39847960 | None:intergenic | 5.0% |
| !! | TTAAAAAAAAAAAAAAGATT+AGG | - | chr4.4:39847879-39847898 | None:intergenic | 5.0% |
| !!! | AAATTTTAATAACTAAATTT+AGG | + | chr4.4:39848050-39848069 | MS.gene57369:intron | 5.0% |
| ACGGGATACCAATTGGACCA+AGG | + | chr4.4:39847399-39847418 | MS.gene57369:CDS | 50.0% | |
| CGGGATACCAATTGGACCAA+GGG | + | chr4.4:39847400-39847419 | MS.gene57369:CDS | 50.0% | |
| CTATGCCGAGCTATGCTTCA+AGG | + | chr4.4:39846543-39846562 | MS.gene57369:CDS | 50.0% | |
| GACTGCTCTCTGGTGAACTT+TGG | - | chr4.4:39847110-39847129 | None:intergenic | 50.0% | |
| GCTGCAAATGAAGGTGGAAG+AGG | + | chr4.4:39844366-39844385 | MS.gene57369:CDS | 50.0% | |
| GGATACTCTCCTGTTGTCAG+TGG | - | chr4.4:39847053-39847072 | None:intergenic | 50.0% | |
| GGGAAGATCCCAGTGGAAAA+GGG | - | chr4.4:39846251-39846270 | None:intergenic | 50.0% | |
| GTACTCGTCTTGTAGCGCTT+GGG | - | chr4.4:39846272-39846291 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | + | chr4.4:39847754-39847773 | MS.gene57369:intron | 50.0% | |
| TACTCGTCTTGTAGCGCTTG+GGG | - | chr4.4:39846271-39846290 | None:intergenic | 50.0% | |
| TACTGCCTCATCCTCTTACC+AGG | + | chr4.4:39844089-39844108 | MS.gene57369:CDS | 50.0% | |
| TAGGTTATGTAGCGCCTGAC+AGG | - | chr4.4:39845291-39845310 | None:intergenic | 50.0% | |
| TCGGAGACAGAGTGAAGCAT+TGG | + | chr4.4:39846569-39846588 | MS.gene57369:CDS | 50.0% | |
| TGGTTGTGTGAGGCCATGTA+AGG | - | chr4.4:39846637-39846656 | None:intergenic | 50.0% | |
| TGTACTCGTCTTGTAGCGCT+TGG | - | chr4.4:39846273-39846292 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGTTGGTTGTGTG+AGG | - | chr4.4:39846647-39846666 | None:intergenic | 50.0% |
| ! | CTCACCGGTGTCAATTTAGG+TGG | + | chr4.4:39847769-39847788 | MS.gene57369:intron | 50.0% |
| ! | GAGCGTAACGGGATACCAAT+TGG | + | chr4.4:39847392-39847411 | MS.gene57369:CDS | 50.0% |
| ! | GCCTCTTCAAGTGATAGCGT+TGG | - | chr4.4:39848095-39848114 | None:intergenic | 50.0% |
| !! | GAAGGTGCTGCAAATGAAGG+TGG | + | chr4.4:39844360-39844379 | MS.gene57369:CDS | 50.0% |
| !! | TCGGTGTTGCACCTGATGAT+TGG | - | chr4.4:39846698-39846717 | None:intergenic | 50.0% |
| ACGCACCTGGTAAGAGGATG+AGG | - | chr4.4:39844097-39844116 | None:intergenic | 55.0% | |
| CAGCTGCATGAGCAAGGAGT+TGG | - | chr4.4:39846657-39846676 | None:intergenic | 55.0% | |
| CCGCCCACCTAAATTGACAC+CGG | - | chr4.4:39847776-39847795 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | - | chr4.4:39847750-39847769 | None:intergenic | 55.0% | |
| GCGCTACAAGACGAGTACAG+CGG | + | chr4.4:39846274-39846293 | MS.gene57369:CDS | 55.0% | |
| GGGGAAGATCCCAGTGGAAA+AGG | - | chr4.4:39846252-39846271 | None:intergenic | 55.0% | |
| TGACAGCAGCTGCATGAGCA+AGG | - | chr4.4:39846663-39846682 | None:intergenic | 55.0% | |
| ! | CCGGTGTCAATTTAGGTGGG+CGG | + | chr4.4:39847773-39847792 | MS.gene57369:intron | 55.0% |
| ! | CGGTGTCAATTTAGGTGGGC+GGG | + | chr4.4:39847774-39847793 | MS.gene57369:intron | 55.0% |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr4.4:39847747-39847766 | None:intergenic | 60.0% | |
| GCGCTTGGGGAAGATCCCAG+TGG | - | chr4.4:39846258-39846277 | None:intergenic | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr4.4:39847739-39847758 | MS.gene57369:intron | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr4.4:39847732-39847751 | MS.gene57369:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 39843931 | 39848184 | 39843931 | ID=MS.gene57369 |
| chr4.4 | mRNA | 39843931 | 39848184 | 39843931 | ID=MS.gene57369.t1;Parent=MS.gene57369 |
| chr4.4 | exon | 39843931 | 39844110 | 39843931 | ID=MS.gene57369.t1.exon1;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39843931 | 39844110 | 39843931 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39844357 | 39844426 | 39844357 | ID=MS.gene57369.t1.exon2;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39844357 | 39844426 | 39844357 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39845574 | 39845632 | 39845574 | ID=MS.gene57369.t1.exon3;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39845574 | 39845632 | 39845574 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39845839 | 39845914 | 39845839 | ID=MS.gene57369.t1.exon4;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39845839 | 39845914 | 39845839 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39846031 | 39846108 | 39846031 | ID=MS.gene57369.t1.exon5;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39846031 | 39846108 | 39846031 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39846230 | 39846317 | 39846230 | ID=MS.gene57369.t1.exon6;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39846230 | 39846317 | 39846230 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39846528 | 39846705 | 39846528 | ID=MS.gene57369.t1.exon7;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39846528 | 39846705 | 39846528 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39846791 | 39846906 | 39846791 | ID=MS.gene57369.t1.exon8;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39846791 | 39846906 | 39846791 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39847040 | 39847263 | 39847040 | ID=MS.gene57369.t1.exon9;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39847040 | 39847263 | 39847040 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39847390 | 39847421 | 39847390 | ID=MS.gene57369.t1.exon10;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39847390 | 39847421 | 39847390 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39847535 | 39847637 | 39847535 | ID=MS.gene57369.t1.exon11;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39847535 | 39847637 | 39847535 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| chr4.4 | exon | 39848072 | 39848184 | 39848072 | ID=MS.gene57369.t1.exon12;Parent=MS.gene57369.t1 |
| chr4.4 | CDS | 39848072 | 39848184 | 39848072 | ID=cds.MS.gene57369.t1;Parent=MS.gene57369.t1 |
| Gene Sequence |
| Protein sequence |
