Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056351.t1 | XP_013456256.1 | 94.3 | 438 | 25 | 0 | 1 | 438 | 1 | 438 | 3.20E-249 | 870.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056351.t1 | B8AVF0 | 60.4 | 424 | 140 | 2 | 41 | 438 | 34 | 455 | 3.7e-153 | 542.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056351.t1 | A0A072UKP9 | 94.3 | 438 | 25 | 0 | 1 | 438 | 1 | 438 | 2.3e-249 | 870.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052589 | MS.gene056351 | 0.807273 | 5.48E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene056351 | 0.832028 | 1.19E-55 | -1.69E-46 |
| MS.gene054102 | MS.gene056351 | 0.807572 | 4.73E-50 | -1.69E-46 |
| MS.gene054110 | MS.gene056351 | 0.816988 | 4.16E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene056351 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene055370 | MS.gene056351 | 0.818996 | 1.46E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene056633 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene056877 | 0.807621 | 4.62E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene057196 | 0.830996 | 2.14E-55 | -1.69E-46 |
| MS.gene056351 | MS.gene058746 | 0.829494 | 4.99E-55 | -1.69E-46 |
| MS.gene056351 | MS.gene059303 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene059512 | 0.865092 | 7.58E-65 | -1.69E-46 |
| MS.gene056351 | MS.gene062524 | 0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene063196 | 0.835319 | 1.80E-56 | -1.69E-46 |
| MS.gene056351 | MS.gene065046 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene06655 | 0.832366 | 9.85E-56 | -1.69E-46 |
| MS.gene056351 | MS.gene067329 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene06869 | 0.817805 | 2.72E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene07014 | 0.806643 | 7.44E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene071517 | 0.88423 | 2.29E-71 | -1.69E-46 |
| MS.gene056351 | MS.gene071518 | 0.884176 | 2.40E-71 | -1.69E-46 |
| MS.gene056351 | MS.gene071519 | 0.884469 | 1.87E-71 | -1.69E-46 |
| MS.gene056351 | MS.gene071520 | 0.855364 | 6.63E-62 | -1.69E-46 |
| MS.gene056351 | MS.gene072314 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene09667 | 0.845046 | 5.19E-59 | -1.69E-46 |
| MS.gene056351 | MS.gene20482 | 0.830809 | 2.38E-55 | -1.69E-46 |
| MS.gene056351 | MS.gene20856 | 0.803686 | 3.10E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene20952 | 0.807227 | 5.60E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene20987 | 0.850519 | 1.61E-60 | -1.69E-46 |
| MS.gene056351 | MS.gene21054 | 0.851543 | 8.29E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene21094 | 0.838819 | 2.29E-57 | -1.69E-46 |
| MS.gene056351 | MS.gene21238 | 0.852712 | 3.86E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene21480 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene22411 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene22474 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene22943 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene24120 | 0.800561 | 1.36E-48 | -1.69E-46 |
| MS.gene056351 | MS.gene24781 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene25265 | 0.823673 | 1.22E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene25660 | 0.844096 | 9.34E-59 | -1.69E-46 |
| MS.gene056351 | MS.gene25663 | 0.836734 | 7.87E-57 | -1.69E-46 |
| MS.gene056351 | MS.gene26687 | 0.816158 | 6.39E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene27093 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene27916 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene28687 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene28776 | 0.815201 | 1.04E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene29250 | 0.807209 | 5.65E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene29775 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene35134 | 0.847362 | 1.21E-59 | -1.69E-46 |
| MS.gene056351 | MS.gene36467 | 0.826739 | 2.30E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene38033 | 0.814006 | 1.92E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene40650 | 0.815771 | 7.79E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene40750 | 0.837796 | 4.21E-57 | -1.69E-46 |
| MS.gene056351 | MS.gene42798 | 0.821056 | 4.95E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene44666 | 0.822248 | 2.62E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene44673 | 0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene47344 | 0.862291 | 5.63E-64 | -1.69E-46 |
| MS.gene056351 | MS.gene47873 | 0.810798 | 9.63E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene49436 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene49712 | 0.808497 | 3.01E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene50859 | 0.823531 | 1.32E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene54585 | 0.851883 | 6.64E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene54795 | 0.814982 | 1.17E-51 | -1.69E-46 |
| MS.gene056351 | MS.gene55678 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene56071 | 0.867887 | 9.82E-66 | -1.69E-46 |
| MS.gene056351 | MS.gene56072 | 0.851404 | 9.08E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene56074 | 0.884218 | 2.31E-71 | -1.69E-46 |
| MS.gene056351 | MS.gene56402 | 0.881659 | 2.00E-70 | -1.69E-46 |
| MS.gene056351 | MS.gene56403 | 0.888005 | 8.66E-73 | -1.69E-46 |
| MS.gene056351 | MS.gene57287 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene57369 | 0.866351 | 3.04E-65 | -1.69E-46 |
| MS.gene056351 | MS.gene59101 | 0.823283 | 1.51E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene61293 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene62631 | -0.804383 | 2.22E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene62955 | 0.825971 | 3.50E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene64048 | 0.822795 | 1.96E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene66702 | 0.815931 | 7.18E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene66922 | 0.831397 | 1.71E-55 | -1.69E-46 |
| MS.gene056351 | MS.gene68595 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene70176 | 0.815453 | 9.17E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene71006 | 0.800306 | 1.53E-48 | -1.69E-46 |
| MS.gene056351 | MS.gene72416 | 0.823743 | 1.18E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene73515 | 0.82082 | 5.60E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene75346 | 0.852369 | 4.83E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene76218 | 0.805629 | 1.22E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene76419 | 0.817257 | 3.62E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene77727 | 0.826545 | 2.56E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene77877 | 0.808865 | 2.51E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene79744 | 0.809316 | 2.01E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene82011 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene056351 | MS.gene87467 | 0.817273 | 3.59E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene88577 | 0.8438 | 1.12E-58 | -1.69E-46 |
| MS.gene056351 | MS.gene88958 | 0.825675 | 4.12E-54 | -1.69E-46 |
| MS.gene056351 | MS.gene90871 | 0.83429 | 3.26E-56 | -1.69E-46 |
| MS.gene056351 | MS.gene91098 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene056351 | MS.gene92106 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene95302 | 0.829845 | 4.10E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056351.t1 | MTR_4g066330 | 94.292 | 438 | 25 | 0 | 1 | 438 | 1 | 438 | 0.0 | 872 |
| MS.gene056351.t1 | MTR_4g066280 | 88.333 | 420 | 49 | 0 | 19 | 438 | 19 | 438 | 0.0 | 786 |
| MS.gene056351.t1 | MTR_2g098540 | 67.634 | 448 | 116 | 3 | 17 | 438 | 8 | 452 | 0.0 | 626 |
| MS.gene056351.t1 | MTR_2g098790 | 67.123 | 438 | 114 | 3 | 27 | 438 | 26 | 459 | 0.0 | 612 |
| MS.gene056351.t1 | MTR_2g098520 | 66.514 | 436 | 116 | 3 | 29 | 438 | 24 | 455 | 0.0 | 606 |
| MS.gene056351.t1 | MTR_6g078330 | 63.755 | 458 | 132 | 4 | 9 | 438 | 7 | 458 | 0.0 | 592 |
| MS.gene056351.t1 | MTR_6g078450 | 64.206 | 447 | 132 | 3 | 18 | 438 | 13 | 457 | 0.0 | 589 |
| MS.gene056351.t1 | MTR_6g078450 | 64.206 | 447 | 132 | 3 | 18 | 438 | 13 | 457 | 0.0 | 588 |
| MS.gene056351.t1 | MTR_4g015420 | 66.745 | 427 | 128 | 6 | 23 | 438 | 47 | 470 | 0.0 | 583 |
| MS.gene056351.t1 | MTR_2g098540 | 68.889 | 405 | 98 | 2 | 60 | 438 | 6 | 408 | 0.0 | 581 |
| MS.gene056351.t1 | MTR_4g066640 | 61.211 | 446 | 147 | 3 | 17 | 438 | 15 | 458 | 0.0 | 574 |
| MS.gene056351.t1 | MTR_4g066580 | 59.052 | 464 | 160 | 3 | 1 | 438 | 1 | 460 | 0.0 | 567 |
| MS.gene056351.t1 | MTR_3g028720 | 62.791 | 430 | 132 | 2 | 35 | 438 | 32 | 459 | 0.0 | 567 |
| MS.gene056351.t1 | MTR_3g028720 | 62.791 | 430 | 132 | 2 | 35 | 438 | 32 | 459 | 0.0 | 566 |
| MS.gene056351.t1 | MTR_2g043200 | 62.313 | 467 | 127 | 8 | 18 | 438 | 1 | 464 | 0.0 | 565 |
| MS.gene056351.t1 | MTR_6g078380 | 62.640 | 447 | 140 | 3 | 18 | 438 | 13 | 458 | 0.0 | 563 |
| MS.gene056351.t1 | MTR_4g066210 | 61.048 | 439 | 140 | 3 | 29 | 438 | 28 | 464 | 0.0 | 559 |
| MS.gene056351.t1 | MTR_4g066240 | 60.089 | 451 | 149 | 3 | 17 | 438 | 9 | 457 | 0.0 | 559 |
| MS.gene056351.t1 | MTR_4g066590 | 60.706 | 453 | 145 | 3 | 17 | 438 | 4 | 454 | 0.0 | 558 |
| MS.gene056351.t1 | MTR_4g066240 | 60.222 | 450 | 148 | 3 | 17 | 437 | 9 | 456 | 0.0 | 558 |
| MS.gene056351.t1 | MTR_4g066630 | 60.948 | 443 | 145 | 2 | 21 | 437 | 19 | 459 | 0.0 | 558 |
| MS.gene056351.t1 | MTR_4g066630 | 60.948 | 443 | 145 | 2 | 21 | 437 | 19 | 459 | 0.0 | 557 |
| MS.gene056351.t1 | MTR_4g015460 | 63.953 | 430 | 143 | 7 | 18 | 438 | 19 | 445 | 0.0 | 551 |
| MS.gene056351.t1 | MTR_5g071520 | 58.065 | 465 | 150 | 4 | 17 | 438 | 7 | 469 | 0.0 | 537 |
| MS.gene056351.t1 | MTR_4g066580 | 58.879 | 428 | 146 | 3 | 1 | 402 | 1 | 424 | 0.0 | 518 |
| MS.gene056351.t1 | MTR_3g028720 | 62.437 | 394 | 120 | 2 | 35 | 402 | 32 | 423 | 0.0 | 513 |
| MS.gene056351.t1 | MTR_4g066630 | 61.029 | 408 | 131 | 2 | 21 | 402 | 19 | 424 | 3.17e-180 | 510 |
| MS.gene056351.t1 | MTR_4g066240 | 58.795 | 415 | 140 | 3 | 17 | 402 | 9 | 421 | 5.18e-177 | 501 |
| MS.gene056351.t1 | MTR_4g066340 | 62.730 | 381 | 114 | 2 | 84 | 438 | 6 | 384 | 7.38e-175 | 496 |
| MS.gene056351.t1 | MTR_3g026280 | 55.631 | 444 | 162 | 4 | 22 | 438 | 3 | 438 | 4.49e-174 | 496 |
| MS.gene056351.t1 | MTR_4g023000 | 56.132 | 424 | 154 | 3 | 39 | 437 | 22 | 438 | 2.90e-172 | 492 |
| MS.gene056351.t1 | MTR_4g067040 | 59.606 | 406 | 130 | 3 | 17 | 390 | 4 | 407 | 9.45e-171 | 485 |
| MS.gene056351.t1 | MTR_6g078330 | 64.326 | 356 | 99 | 2 | 109 | 438 | 1 | 354 | 3.80e-168 | 479 |
| MS.gene056351.t1 | MTR_6g078330 | 60.743 | 377 | 114 | 4 | 9 | 357 | 7 | 377 | 9.57e-162 | 461 |
| MS.gene056351.t1 | MTR_4g067040 | 60.367 | 381 | 117 | 3 | 17 | 365 | 4 | 382 | 4.05e-161 | 460 |
| MS.gene056351.t1 | MTR_4g066640 | 58.355 | 377 | 131 | 3 | 17 | 369 | 15 | 389 | 1.62e-160 | 458 |
| MS.gene056351.t1 | MTR_3g028720 | 60.278 | 360 | 115 | 2 | 35 | 368 | 32 | 389 | 9.18e-159 | 454 |
| MS.gene056351.t1 | MTR_4g066630 | 60.165 | 364 | 117 | 2 | 21 | 358 | 19 | 380 | 1.27e-156 | 448 |
| MS.gene056351.t1 | MTR_6g078330 | 61.919 | 344 | 101 | 3 | 121 | 438 | 15 | 354 | 5.48e-155 | 445 |
| MS.gene056351.t1 | MTR_3g026400 | 50.000 | 426 | 181 | 4 | 39 | 438 | 35 | 454 | 3.26e-150 | 437 |
| MS.gene056351.t1 | MTR_3g026620 | 48.796 | 457 | 202 | 4 | 7 | 438 | 6 | 455 | 6.97e-150 | 436 |
| MS.gene056351.t1 | MTR_3g026400 | 49.631 | 407 | 173 | 4 | 58 | 438 | 23 | 423 | 1.09e-141 | 414 |
| MS.gene056351.t1 | MTR_4g083000 | 47.007 | 451 | 196 | 7 | 23 | 438 | 6 | 448 | 3.56e-139 | 408 |
| MS.gene056351.t1 | MTR_4g081530 | 47.907 | 430 | 195 | 3 | 35 | 438 | 18 | 444 | 2.34e-138 | 406 |
| MS.gene056351.t1 | MTR_5g044000 | 45.638 | 447 | 193 | 4 | 39 | 438 | 23 | 466 | 1.07e-133 | 395 |
| MS.gene056351.t1 | MTR_0110s0040 | 42.117 | 463 | 235 | 6 | 1 | 437 | 2 | 457 | 7.96e-131 | 387 |
| MS.gene056351.t1 | MTR_0110s0030 | 42.702 | 459 | 226 | 7 | 6 | 437 | 9 | 457 | 1.99e-129 | 384 |
| MS.gene056351.t1 | MTR_3g033810 | 46.024 | 415 | 201 | 6 | 41 | 438 | 21 | 429 | 3.99e-128 | 380 |
| MS.gene056351.t1 | MTR_3g033790 | 45.433 | 416 | 203 | 7 | 40 | 438 | 18 | 426 | 5.65e-127 | 377 |
| MS.gene056351.t1 | MTR_3g026400 | 53.963 | 328 | 123 | 3 | 39 | 340 | 35 | 360 | 1.97e-126 | 371 |
| MS.gene056351.t1 | MTR_4g131810 | 44.762 | 420 | 204 | 3 | 46 | 438 | 33 | 451 | 1.69e-124 | 371 |
| MS.gene056351.t1 | MTR_2g022760 | 43.237 | 451 | 219 | 6 | 18 | 438 | 14 | 457 | 4.10e-120 | 360 |
| MS.gene056351.t1 | MTR_2g079580 | 43.735 | 423 | 210 | 5 | 41 | 438 | 32 | 451 | 1.94e-117 | 353 |
| MS.gene056351.t1 | MTR_2g079550 | 43.091 | 427 | 207 | 6 | 41 | 438 | 30 | 449 | 5.30e-117 | 352 |
| MS.gene056351.t1 | MTR_7g033860 | 44.258 | 418 | 200 | 7 | 43 | 437 | 50 | 457 | 4.36e-116 | 349 |
| MS.gene056351.t1 | MTR_2g079580 | 45.995 | 387 | 181 | 5 | 41 | 402 | 32 | 415 | 2.06e-115 | 344 |
| MS.gene056351.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 5.84e-112 | 337 |
| MS.gene056351.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 1.09e-111 | 337 |
| MS.gene056351.t1 | MTR_4g131800 | 44.917 | 423 | 196 | 7 | 46 | 438 | 521 | 936 | 1.47e-111 | 352 |
| MS.gene056351.t1 | MTR_2g022710 | 40.044 | 452 | 232 | 7 | 17 | 438 | 13 | 455 | 2.04e-111 | 338 |
| MS.gene056351.t1 | MTR_4g016920 | 44.313 | 422 | 184 | 8 | 40 | 430 | 26 | 427 | 1.35e-110 | 335 |
| MS.gene056351.t1 | MTR_7g068910 | 41.176 | 442 | 216 | 8 | 25 | 438 | 14 | 439 | 1.47e-110 | 335 |
| MS.gene056351.t1 | MTR_0108s0030 | 41.928 | 415 | 196 | 5 | 43 | 437 | 5 | 394 | 3.15e-110 | 332 |
| MS.gene056351.t1 | MTR_0110s0040 | 41.646 | 413 | 209 | 6 | 1 | 387 | 2 | 408 | 1.41e-109 | 329 |
| MS.gene056351.t1 | MTR_2g022710 | 41.587 | 416 | 204 | 7 | 17 | 402 | 13 | 419 | 1.04e-108 | 327 |
| MS.gene056351.t1 | MTR_7g068910 | 40.265 | 452 | 216 | 9 | 25 | 438 | 14 | 449 | 2.43e-107 | 327 |
| MS.gene056351.t1 | MTR_4g083000 | 46.260 | 361 | 156 | 5 | 109 | 438 | 1 | 354 | 5.50e-106 | 320 |
| MS.gene056351.t1 | MTR_5g068740 | 40.281 | 427 | 205 | 7 | 42 | 438 | 28 | 434 | 1.66e-104 | 320 |
| MS.gene056351.t1 | MTR_2g022710 | 40.842 | 404 | 200 | 7 | 17 | 390 | 13 | 407 | 5.79e-103 | 312 |
| MS.gene056351.t1 | MTR_1g088610 | 42.998 | 407 | 185 | 7 | 42 | 417 | 28 | 418 | 1.75e-102 | 318 |
| MS.gene056351.t1 | MTR_7g051510 | 42.446 | 417 | 204 | 6 | 42 | 437 | 76 | 477 | 1.11e-100 | 311 |
| MS.gene056351.t1 | MTR_7g051610 | 42.721 | 419 | 200 | 7 | 42 | 437 | 76 | 477 | 2.04e-98 | 305 |
| MS.gene056351.t1 | MTR_2g022710 | 42.936 | 361 | 172 | 6 | 17 | 347 | 13 | 369 | 2.51e-96 | 296 |
| MS.gene056351.t1 | MTR_7g051650 | 40.573 | 419 | 210 | 6 | 42 | 437 | 76 | 478 | 2.62e-95 | 297 |
| MS.gene056351.t1 | MTR_7g051650 | 40.095 | 419 | 208 | 6 | 42 | 437 | 76 | 474 | 4.20e-94 | 293 |
| MS.gene056351.t1 | MTR_2g022760 | 42.778 | 360 | 170 | 5 | 109 | 438 | 1 | 354 | 9.11e-91 | 281 |
| MS.gene056351.t1 | MTR_1g088630 | 44.586 | 314 | 118 | 5 | 43 | 329 | 29 | 313 | 1.15e-88 | 274 |
| MS.gene056351.t1 | MTR_1g088630 | 38.084 | 407 | 181 | 9 | 60 | 438 | 14 | 377 | 1.47e-84 | 266 |
| MS.gene056351.t1 | MTR_2g022710 | 38.611 | 360 | 185 | 5 | 109 | 438 | 1 | 354 | 2.01e-83 | 262 |
| MS.gene056351.t1 | MTR_4g016920 | 42.776 | 353 | 152 | 7 | 109 | 430 | 1 | 334 | 2.09e-82 | 260 |
| MS.gene056351.t1 | MTR_1g088630 | 46.992 | 266 | 109 | 3 | 43 | 281 | 29 | 289 | 1.55e-80 | 251 |
| MS.gene056351.t1 | MTR_4g016920 | 47.482 | 278 | 109 | 4 | 109 | 356 | 1 | 271 | 3.57e-80 | 250 |
| MS.gene056351.t1 | MTR_7g068900 | 37.330 | 367 | 179 | 7 | 104 | 438 | 17 | 364 | 6.73e-76 | 245 |
| MS.gene056351.t1 | MTR_7g056747 | 40.169 | 356 | 171 | 7 | 103 | 437 | 9 | 343 | 7.79e-75 | 239 |
| MS.gene056351.t1 | MTR_0110s0020 | 43.396 | 265 | 117 | 5 | 6 | 243 | 9 | 267 | 1.26e-71 | 228 |
| MS.gene056351.t1 | MTR_8g038650 | 42.268 | 97 | 56 | 0 | 242 | 338 | 58 | 154 | 5.19e-20 | 87.0 |
| MS.gene056351.t1 | MTR_8g038650 | 51.852 | 54 | 25 | 1 | 50 | 103 | 7 | 59 | 5.98e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056351.t1 | AT5G42260 | 50.219 | 456 | 187 | 7 | 10 | 437 | 4 | 447 | 4.49e-160 | 461 |
| MS.gene056351.t1 | AT5G44640 | 49.780 | 454 | 190 | 6 | 11 | 437 | 5 | 447 | 2.29e-158 | 457 |
| MS.gene056351.t1 | AT2G44450 | 51.887 | 424 | 171 | 4 | 40 | 437 | 30 | 446 | 4.55e-158 | 456 |
| MS.gene056351.t1 | AT2G44480 | 50.461 | 434 | 188 | 2 | 29 | 437 | 23 | 454 | 7.70e-156 | 451 |
| MS.gene056351.t1 | AT2G44480 | 50.461 | 434 | 188 | 2 | 29 | 437 | 54 | 485 | 2.14e-155 | 451 |
| MS.gene056351.t1 | AT3G60130 | 51.054 | 427 | 175 | 5 | 38 | 437 | 27 | 446 | 4.49e-152 | 441 |
| MS.gene056351.t1 | AT2G25630 | 47.577 | 454 | 182 | 7 | 11 | 437 | 5 | 429 | 8.86e-144 | 419 |
| MS.gene056351.t1 | AT5G24550 | 47.461 | 453 | 206 | 6 | 14 | 437 | 5 | 454 | 9.20e-143 | 418 |
| MS.gene056351.t1 | AT5G54570 | 47.319 | 429 | 198 | 2 | 36 | 438 | 25 | 451 | 6.37e-142 | 413 |
| MS.gene056351.t1 | AT5G54570 | 47.319 | 429 | 198 | 2 | 36 | 438 | 25 | 451 | 6.70e-141 | 414 |
| MS.gene056351.t1 | AT1G26560 | 48.349 | 424 | 190 | 3 | 41 | 438 | 32 | 452 | 1.37e-140 | 412 |
| MS.gene056351.t1 | AT3G60120 | 48.611 | 432 | 184 | 8 | 38 | 438 | 11 | 435 | 1.09e-137 | 405 |
| MS.gene056351.t1 | AT5G24540 | 47.241 | 453 | 207 | 5 | 14 | 437 | 5 | 454 | 1.14e-137 | 402 |
| MS.gene056351.t1 | AT3G60140 | 44.615 | 455 | 211 | 6 | 11 | 437 | 6 | 447 | 9.63e-137 | 404 |
| MS.gene056351.t1 | AT5G24540 | 47.241 | 453 | 207 | 5 | 14 | 437 | 5 | 454 | 2.18e-136 | 402 |
| MS.gene056351.t1 | AT2G44490 | 47.005 | 434 | 197 | 6 | 34 | 437 | 7 | 437 | 5.85e-135 | 399 |
| MS.gene056351.t1 | AT1G51470 | 47.156 | 422 | 191 | 5 | 40 | 438 | 44 | 456 | 2.37e-133 | 394 |
| MS.gene056351.t1 | AT2G44470 | 44.027 | 452 | 217 | 7 | 14 | 437 | 7 | 450 | 3.72e-133 | 391 |
| MS.gene056351.t1 | AT1G47600 | 46.445 | 422 | 194 | 5 | 40 | 438 | 44 | 456 | 1.31e-131 | 389 |
| MS.gene056351.t1 | AT1G47600 | 46.445 | 422 | 193 | 5 | 40 | 438 | 44 | 455 | 1.84e-131 | 389 |
| MS.gene056351.t1 | AT2G44470 | 44.027 | 452 | 217 | 7 | 14 | 437 | 7 | 450 | 3.81e-131 | 390 |
| MS.gene056351.t1 | AT3G60140 | 45.476 | 420 | 188 | 6 | 11 | 402 | 6 | 412 | 1.92e-130 | 384 |
| MS.gene056351.t1 | AT5G36890 | 46.172 | 431 | 204 | 6 | 25 | 438 | 7 | 426 | 5.90e-130 | 384 |
| MS.gene056351.t1 | AT5G36890 | 46.172 | 431 | 204 | 6 | 25 | 438 | 7 | 426 | 8.10e-130 | 384 |
| MS.gene056351.t1 | AT2G44460 | 45.395 | 456 | 212 | 8 | 10 | 437 | 3 | 449 | 5.17e-129 | 385 |
| MS.gene056351.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 4.61e-128 | 379 |
| MS.gene056351.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 4.61e-128 | 379 |
| MS.gene056351.t1 | AT5G25980 | 43.368 | 475 | 224 | 11 | 1 | 438 | 1 | 467 | 5.18e-127 | 379 |
| MS.gene056351.t1 | AT5G26000 | 43.070 | 469 | 209 | 10 | 15 | 438 | 1 | 456 | 1.20e-125 | 372 |
| MS.gene056351.t1 | AT3G18080 | 44.313 | 422 | 204 | 6 | 40 | 436 | 38 | 453 | 1.39e-125 | 374 |
| MS.gene056351.t1 | AT5G26000 | 43.070 | 469 | 209 | 10 | 15 | 438 | 1 | 456 | 1.57e-124 | 372 |
| MS.gene056351.t1 | AT2G44480 | 48.870 | 354 | 154 | 2 | 109 | 437 | 1 | 352 | 1.06e-122 | 363 |
| MS.gene056351.t1 | AT3G60130 | 50.000 | 362 | 147 | 5 | 103 | 437 | 40 | 394 | 2.92e-122 | 363 |
| MS.gene056351.t1 | AT3G03640 | 40.523 | 459 | 236 | 6 | 9 | 437 | 6 | 457 | 4.42e-122 | 365 |
| MS.gene056351.t1 | AT2G32860 | 43.326 | 427 | 211 | 5 | 40 | 438 | 93 | 516 | 1.99e-121 | 367 |
| MS.gene056351.t1 | AT1G66280 | 43.750 | 464 | 216 | 11 | 7 | 437 | 4 | 455 | 4.70e-121 | 362 |
| MS.gene056351.t1 | AT3G18070 | 43.365 | 422 | 200 | 7 | 41 | 437 | 30 | 437 | 6.09e-121 | 361 |
| MS.gene056351.t1 | AT2G32860 | 43.091 | 427 | 213 | 4 | 40 | 438 | 93 | 517 | 6.27e-121 | 365 |
| MS.gene056351.t1 | AT3G18070 | 43.602 | 422 | 205 | 7 | 41 | 437 | 30 | 443 | 2.36e-120 | 360 |
| MS.gene056351.t1 | AT3G09260 | 43.192 | 426 | 210 | 6 | 40 | 437 | 34 | 455 | 2.38e-119 | 358 |
| MS.gene056351.t1 | AT2G44480 | 53.055 | 311 | 121 | 1 | 29 | 314 | 54 | 364 | 5.47e-118 | 350 |
| MS.gene056351.t1 | AT1G66270 | 42.889 | 443 | 212 | 7 | 30 | 437 | 19 | 455 | 2.72e-117 | 353 |
| MS.gene056351.t1 | AT1G61820 | 41.357 | 457 | 233 | 7 | 9 | 438 | 4 | 452 | 4.92e-117 | 352 |
| MS.gene056351.t1 | AT1G75940 | 44.676 | 432 | 198 | 8 | 41 | 437 | 37 | 462 | 1.33e-115 | 349 |
| MS.gene056351.t1 | AT3G21370 | 43.537 | 441 | 206 | 9 | 30 | 437 | 26 | 456 | 1.60e-115 | 348 |
| MS.gene056351.t1 | AT1G66270 | 42.664 | 443 | 211 | 8 | 30 | 437 | 19 | 453 | 3.39e-114 | 345 |
| MS.gene056351.t1 | AT5G28510 | 42.212 | 443 | 213 | 8 | 30 | 437 | 30 | 464 | 5.11e-114 | 345 |
| MS.gene056351.t1 | AT3G60130 | 48.343 | 362 | 142 | 6 | 103 | 437 | 40 | 383 | 7.66e-113 | 339 |
| MS.gene056351.t1 | AT2G44470 | 43.182 | 396 | 189 | 7 | 14 | 381 | 7 | 394 | 1.12e-112 | 337 |
| MS.gene056351.t1 | AT1G52400 | 42.404 | 441 | 211 | 9 | 30 | 437 | 30 | 460 | 6.80e-111 | 334 |
| MS.gene056351.t1 | AT5G48375 | 44.757 | 391 | 179 | 9 | 25 | 402 | 22 | 388 | 1.92e-110 | 332 |
| MS.gene056351.t1 | AT1G52400 | 42.404 | 441 | 211 | 9 | 30 | 437 | 30 | 460 | 4.40e-110 | 335 |
| MS.gene056351.t1 | AT1G52400 | 42.404 | 441 | 211 | 9 | 30 | 437 | 30 | 460 | 4.40e-110 | 335 |
| MS.gene056351.t1 | AT4G27830 | 40.179 | 448 | 218 | 8 | 18 | 438 | 6 | 430 | 2.63e-109 | 332 |
| MS.gene056351.t1 | AT1G02850 | 41.109 | 433 | 203 | 8 | 36 | 438 | 21 | 431 | 3.66e-109 | 331 |
| MS.gene056351.t1 | AT1G61810 | 42.118 | 425 | 217 | 6 | 41 | 438 | 33 | 455 | 2.07e-107 | 327 |
| MS.gene056351.t1 | AT1G61810 | 42.118 | 425 | 217 | 6 | 41 | 438 | 33 | 455 | 3.92e-107 | 327 |
| MS.gene056351.t1 | AT5G54570 | 45.506 | 356 | 166 | 2 | 109 | 438 | 1 | 354 | 2.12e-106 | 322 |
| MS.gene056351.t1 | AT1G02850 | 39.254 | 456 | 202 | 9 | 36 | 438 | 21 | 454 | 9.12e-105 | 321 |
| MS.gene056351.t1 | AT1G02850 | 39.955 | 448 | 194 | 9 | 36 | 430 | 21 | 446 | 1.46e-104 | 320 |
| MS.gene056351.t1 | AT1G02850 | 41.429 | 420 | 177 | 8 | 36 | 402 | 21 | 424 | 2.13e-104 | 317 |
| MS.gene056351.t1 | AT4G21760 | 38.938 | 452 | 241 | 6 | 15 | 438 | 25 | 469 | 1.26e-103 | 318 |
| MS.gene056351.t1 | AT4G27820 | 40.515 | 427 | 206 | 7 | 40 | 438 | 22 | 428 | 1.22e-102 | 315 |
| MS.gene056351.t1 | AT3G62750 | 38.215 | 437 | 229 | 8 | 21 | 438 | 31 | 445 | 5.49e-102 | 311 |
| MS.gene056351.t1 | AT3G62750 | 38.303 | 436 | 228 | 8 | 22 | 438 | 6 | 419 | 8.48e-102 | 312 |
| MS.gene056351.t1 | AT3G62750 | 38.303 | 436 | 228 | 8 | 22 | 438 | 32 | 445 | 2.10e-101 | 312 |
| MS.gene056351.t1 | AT1G61810 | 43.188 | 389 | 192 | 6 | 41 | 402 | 33 | 419 | 2.85e-101 | 308 |
| MS.gene056351.t1 | AT2G44450 | 48.675 | 302 | 122 | 4 | 162 | 437 | 1 | 295 | 4.64e-100 | 303 |
| MS.gene056351.t1 | AT3G62740 | 37.443 | 438 | 226 | 9 | 25 | 437 | 9 | 423 | 9.74e-100 | 305 |
| MS.gene056351.t1 | AT3G62740 | 37.443 | 438 | 226 | 9 | 25 | 437 | 9 | 423 | 1.01e-98 | 305 |
| MS.gene056351.t1 | AT4G22100 | 38.837 | 430 | 221 | 8 | 34 | 438 | 16 | 428 | 1.58e-98 | 304 |
| MS.gene056351.t1 | AT3G18070 | 44.444 | 342 | 159 | 6 | 41 | 357 | 30 | 365 | 5.42e-98 | 299 |
| MS.gene056351.t1 | AT4G21760 | 38.053 | 452 | 235 | 7 | 15 | 438 | 25 | 459 | 1.01e-97 | 303 |
| MS.gene056351.t1 | AT1G60090 | 36.879 | 423 | 224 | 6 | 41 | 438 | 24 | 428 | 3.42e-97 | 301 |
| MS.gene056351.t1 | AT1G02850 | 39.030 | 433 | 185 | 9 | 36 | 438 | 21 | 404 | 6.94e-97 | 299 |
| MS.gene056351.t1 | AT1G60090 | 38.860 | 386 | 194 | 5 | 41 | 401 | 24 | 392 | 1.41e-95 | 296 |
| MS.gene056351.t1 | AT3G62750 | 41.265 | 332 | 169 | 4 | 22 | 336 | 6 | 328 | 1.25e-93 | 287 |
| MS.gene056351.t1 | AT3G62750 | 41.265 | 332 | 169 | 4 | 22 | 336 | 6 | 328 | 1.25e-93 | 287 |
| MS.gene056351.t1 | AT1G60270 | 40.762 | 341 | 171 | 3 | 41 | 356 | 24 | 358 | 4.66e-93 | 286 |
| MS.gene056351.t1 | AT3G62750 | 41.265 | 332 | 169 | 4 | 22 | 336 | 32 | 354 | 1.10e-92 | 287 |
| MS.gene056351.t1 | AT1G45191 | 36.730 | 422 | 220 | 7 | 42 | 438 | 30 | 429 | 1.06e-91 | 286 |
| MS.gene056351.t1 | AT1G45191 | 36.792 | 424 | 228 | 7 | 42 | 438 | 30 | 440 | 2.46e-91 | 286 |
| MS.gene056351.t1 | AT1G45191 | 36.256 | 422 | 228 | 6 | 42 | 438 | 30 | 435 | 8.28e-91 | 284 |
| MS.gene056351.t1 | AT1G45191 | 36.195 | 431 | 233 | 7 | 42 | 438 | 30 | 452 | 6.39e-90 | 283 |
| MS.gene056351.t1 | AT1G51490 | 44.186 | 344 | 157 | 7 | 50 | 369 | 29 | 361 | 1.19e-89 | 278 |
| MS.gene056351.t1 | AT1G45191 | 38.040 | 347 | 183 | 3 | 42 | 363 | 30 | 369 | 3.22e-85 | 267 |
| MS.gene056351.t1 | AT1G45191 | 37.293 | 362 | 193 | 4 | 42 | 376 | 30 | 384 | 2.39e-84 | 265 |
| MS.gene056351.t1 | AT4G27830 | 40.336 | 357 | 171 | 6 | 109 | 438 | 1 | 342 | 5.25e-83 | 261 |
| MS.gene056351.t1 | AT1G61810 | 40.336 | 357 | 184 | 6 | 109 | 438 | 1 | 355 | 1.30e-80 | 255 |
| MS.gene056351.t1 | AT1G61810 | 46.097 | 269 | 119 | 3 | 41 | 284 | 33 | 300 | 2.87e-79 | 248 |
| MS.gene056351.t1 | AT4G27820 | 39.385 | 358 | 174 | 6 | 109 | 438 | 1 | 343 | 4.74e-77 | 246 |
| MS.gene056351.t1 | AT4G27820 | 39.385 | 358 | 174 | 6 | 109 | 438 | 1 | 343 | 4.74e-77 | 246 |
| MS.gene056351.t1 | AT3G62750 | 37.536 | 349 | 184 | 6 | 109 | 438 | 1 | 334 | 2.08e-74 | 239 |
| MS.gene056351.t1 | AT3G62750 | 37.536 | 349 | 184 | 6 | 109 | 438 | 1 | 334 | 2.08e-74 | 239 |
| MS.gene056351.t1 | AT2G44460 | 44.118 | 306 | 140 | 5 | 160 | 437 | 1 | 303 | 2.00e-73 | 237 |
| MS.gene056351.t1 | AT2G44480 | 47.511 | 221 | 114 | 1 | 217 | 437 | 30 | 248 | 3.68e-68 | 219 |
| MS.gene056351.t1 | AT1G61820 | 38.585 | 311 | 163 | 5 | 155 | 438 | 4 | 313 | 1.03e-66 | 218 |
| MS.gene056351.t1 | AT1G60270 | 39.560 | 273 | 138 | 2 | 109 | 356 | 1 | 271 | 1.48e-65 | 212 |
| MS.gene056351.t1 | AT3G18070 | 40.217 | 276 | 137 | 4 | 187 | 437 | 94 | 366 | 3.69e-64 | 213 |
| MS.gene056351.t1 | AT3G18070 | 54.688 | 64 | 28 | 1 | 40 | 103 | 29 | 91 | 6.93e-15 | 76.6 |
| MS.gene056351.t1 | AT3G18070 | 43.439 | 221 | 122 | 2 | 217 | 437 | 37 | 254 | 1.26e-59 | 197 |
| MS.gene056351.t1 | AT3G18070 | 41.322 | 242 | 116 | 3 | 187 | 403 | 94 | 334 | 1.88e-58 | 195 |
| MS.gene056351.t1 | AT3G18070 | 49.296 | 71 | 35 | 1 | 40 | 110 | 29 | 98 | 3.89e-15 | 76.6 |
| MS.gene056351.t1 | AT3G18070 | 45.455 | 187 | 101 | 1 | 217 | 403 | 37 | 222 | 3.86e-54 | 180 |
| MS.gene056351.t1 | AT5G16580 | 34.307 | 274 | 147 | 5 | 187 | 438 | 27 | 289 | 4.03e-46 | 161 |
| MS.gene056351.t1 | AT3G06510 | 23.932 | 351 | 194 | 15 | 105 | 437 | 160 | 455 | 1.63e-13 | 73.2 |
| MS.gene056351.t1 | AT3G06510 | 23.204 | 362 | 217 | 14 | 105 | 437 | 160 | 489 | 6.79e-13 | 71.2 |
Find 93 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCAACTTACATAATATT+AGG | 0.188638 | 4.1:-34560027 | None:intergenic |
| GTGGAAGAGGACAAAGTATT+TGG | 0.192835 | 4.1:+34558295 | MS.gene056351:CDS |
| TGTAATATTTGATTCCTTCT+TGG | 0.196303 | 4.1:-34559825 | None:intergenic |
| GAGCAATCTAAGATGCTTAT+TGG | 0.209909 | 4.1:+34560794 | MS.gene056351:CDS |
| TTGATTTACATAACAGAAAA+TGG | 0.216843 | 4.1:+34561317 | MS.gene056351:CDS |
| GTTATACTTGGCAATATTCT+TGG | 0.259733 | 4.1:-34559677 | None:intergenic |
| TGGCATCAGGCTTCTCAAAA+TGG | 0.265050 | 4.1:+34560504 | MS.gene056351:intron |
| GTAACAGCTGCTGCCATTAT+TGG | 0.270052 | 4.1:-34557916 | None:intergenic |
| TGGTATATTGGAAGCATAAT+TGG | 0.270855 | 4.1:-34560852 | None:intergenic |
| CGTGCTCTTGATTTCATGTT+TGG | 0.298768 | 4.1:+34560603 | MS.gene056351:CDS |
| ATTATTTGATTGTGGTATAT+TGG | 0.312657 | 4.1:-34560864 | None:intergenic |
| TAGCTCCTTTGTTCCAATAA+TGG | 0.326020 | 4.1:+34557903 | MS.gene056351:CDS |
| ATGCAACTTACATAATATTA+GGG | 0.338145 | 4.1:-34560026 | None:intergenic |
| ATCAATGAACTACTTGATAA+TGG | 0.365882 | 4.1:+34559856 | MS.gene056351:CDS |
| CATCAATATTTCCTCTACTT+TGG | 0.365921 | 4.1:+34557862 | MS.gene056351:CDS |
| TGAGCCACACTCTTACAGTT+TGG | 0.367434 | 4.1:+34560325 | MS.gene056351:CDS |
| GCTTCTCAAAATGGTTCAAT+TGG | 0.377536 | 4.1:+34560513 | MS.gene056351:CDS |
| TTACTCACCCTTGGTCCAAT+TGG | 0.387264 | 4.1:-34561096 | None:intergenic |
| ACGAAAGACACCATGCTTGA+TGG | 0.404375 | 4.1:-34560743 | None:intergenic |
| CATGAAATCAAGAGCACGTT+CGG | 0.407930 | 4.1:-34560598 | None:intergenic |
| TATCAAGTAGTTCATTGATC+AGG | 0.412549 | 4.1:-34559852 | None:intergenic |
| GTACTCGTCTTGTAACGCTT+GGG | 0.412943 | 4.1:-34559989 | None:intergenic |
| GAGCCACACTCTTACAGTTT+GGG | 0.414537 | 4.1:+34560326 | MS.gene056351:CDS |
| TGGAAGAGGACAAAGTATTT+GGG | 0.414779 | 4.1:+34558296 | MS.gene056351:CDS |
| TCGGTGTTGCACCTGATGAT+TGG | 0.418117 | 4.1:-34560417 | None:intergenic |
| GGGGAAGATCCCAGTGGAAA+AGG | 0.421057 | 4.1:-34559969 | None:intergenic |
| GGATACTCTCCTGTTGTCAT+TGG | 0.424734 | 4.1:-34560722 | None:intergenic |
| TACAAAACGCACCTGGTAAG+AGG | 0.428857 | 4.1:-34558016 | None:intergenic |
| TGATCAGTATCATCGTTATA+AGG | 0.429927 | 4.1:+34559393 | MS.gene056351:CDS |
| GAGCTATGCTTCAAGGAATT+CGG | 0.432941 | 4.1:+34560272 | MS.gene056351:CDS |
| GATTGCTCACTGGTGAACTT+TGG | 0.447742 | 4.1:-34560779 | None:intergenic |
| TGTACTCGTCTTGTAACGCT+TGG | 0.451192 | 4.1:-34559990 | None:intergenic |
| AGAAGTTCTTGAATCCCTCT+TGG | 0.456131 | 4.1:-34561263 | None:intergenic |
| TTTATGCAGCCAATGACAAC+AGG | 0.457466 | 4.1:+34560713 | MS.gene056351:CDS |
| GAGCGTAACAGGACACCAAT+TGG | 0.457548 | 4.1:+34561081 | MS.gene056351:CDS |
| CTATGCCGAGCTATGCTTCA+AGG | 0.457568 | 4.1:+34560265 | MS.gene056351:CDS |
| CAAAGTAGAGGAAATATTGA+TGG | 0.467715 | 4.1:-34557861 | None:intergenic |
| TTTGGGTACGGAACCTTACA+TGG | 0.476476 | 4.1:+34560343 | MS.gene056351:CDS |
| ATCACTTGAAGAGGCGCTCA+TGG | 0.476692 | 4.1:+34561610 | MS.gene056351:CDS |
| AAAATATTGGATGGAGGCAA+TGG | 0.486648 | 4.1:+34559358 | MS.gene056351:CDS |
| ATCAAGCATGGTGTCTTTCG+TGG | 0.490440 | 4.1:+34560745 | MS.gene056351:CDS |
| GTACGGTCAACAAGTGTTGT+AGG | 0.490892 | 4.1:-34557940 | None:intergenic |
| CATACAGATTCTCCATCTCT+TGG | 0.492132 | 4.1:+34559654 | MS.gene056351:CDS |
| TGGTTGTGTGAGGCCATGTA+AGG | 0.493958 | 4.1:-34560356 | None:intergenic |
| CACAAGGGCATGGCATTCAA+TGG | 0.496087 | 4.1:+34557838 | None:intergenic |
| GGCTATTTGTTTATCCAAGA+GGG | 0.499794 | 4.1:+34561249 | MS.gene056351:CDS |
| TCGGAGACAGAGTGAAGCAT+TGG | 0.500114 | 4.1:+34560291 | MS.gene056351:CDS |
| GCATCACCTTAAATTGTCAC+TGG | 0.501551 | 4.1:+34560535 | MS.gene056351:CDS |
| TACTGCCTCATCCTCTTACC+AGG | 0.507287 | 4.1:+34558005 | MS.gene056351:CDS |
| TGAGTATCCTTGAAATATCC+AGG | 0.513235 | 4.1:-34560899 | None:intergenic |
| GGGAAGATCCCAGTGGAAAA+GGG | 0.516334 | 4.1:-34559968 | None:intergenic |
| GTAAGAGTGTGGCTCATTGA+GGG | 0.516603 | 4.1:-34560318 | None:intergenic |
| CAATATTCTTGGCCAAGAGA+TGG | 0.516800 | 4.1:-34559666 | None:intergenic |
| CTCTTGATTTCATGTTTGGA+TGG | 0.519547 | 4.1:+34560607 | MS.gene056351:CDS |
| ACGCACCTGGTAAGAGGATG+AGG | 0.521862 | 4.1:-34558010 | None:intergenic |
| AATAATGACACAAGCACACC+TGG | 0.522457 | 4.1:+34560881 | MS.gene056351:CDS |
| GCTGCAAATGAAGGTGGAAG+AGG | 0.523453 | 4.1:+34558282 | MS.gene056351:CDS |
| AAGCACACCTGGATATTTCA+AGG | 0.530555 | 4.1:+34560892 | MS.gene056351:CDS |
| CAGCTGCATGAGCAAGGAGT+TGG | 0.531565 | 4.1:-34560376 | None:intergenic |
| ACTTTATAGAACCAATCATC+AGG | 0.533812 | 4.1:+34560406 | MS.gene056351:CDS |
| TGTAAGAGTGTGGCTCATTG+AGG | 0.538006 | 4.1:-34560319 | None:intergenic |
| GCAGAAGGAAAAGTAAATGA+AGG | 0.542081 | 4.1:+34559796 | MS.gene056351:intron |
| CAGTGGAAAAGGGTCACAAA+TGG | 0.545800 | 4.1:-34559958 | None:intergenic |
| CTTGTGTCATTATTTGATTG+TGG | 0.555807 | 4.1:-34560872 | None:intergenic |
| TGACAGCAGCTGCATGAGCA+AGG | 0.559687 | 4.1:-34560382 | None:intergenic |
| ATGTACAGGCTGCTTCGCCT+TGG | 0.560872 | 4.1:+34561228 | MS.gene056351:intron |
| AAATATGCTCATGAACATCC+AGG | 0.571960 | 4.1:+34558321 | MS.gene056351:CDS |
| AATGAAGGTATAAACCAAGA+AGG | 0.573462 | 4.1:+34559811 | MS.gene056351:CDS |
| GTGTTGATAATGTAGTATGA+AGG | 0.577599 | 4.1:+34558258 | MS.gene056351:intron |
| TGCTGCCATTATTGGAACAA+AGG | 0.578034 | 4.1:-34557908 | None:intergenic |
| TATGAAGGTGCTGCAAATGA+AGG | 0.579768 | 4.1:+34558273 | MS.gene056351:CDS |
| AAGCATCTTAGATTGCTCAC+TGG | 0.583219 | 4.1:-34560789 | None:intergenic |
| TATATTGGAAGCATAATTGG+AGG | 0.589479 | 4.1:-34560849 | None:intergenic |
| TACTCGTCTTGTAACGCTTG+GGG | 0.589516 | 4.1:-34559988 | None:intergenic |
| AACCATTAGGAAAACTACTA+CGG | 0.590332 | 4.1:-34557972 | None:intergenic |
| TCCAACGCTATCACTTGAAG+AGG | 0.593045 | 4.1:+34561601 | MS.gene056351:CDS |
| ACACTCTTACAGTTTGGGTA+CGG | 0.597858 | 4.1:+34560331 | MS.gene056351:CDS |
| TCAAGCATGGTGTCTTTCGT+GGG | 0.598348 | 4.1:+34560746 | MS.gene056351:CDS |
| GAATTCCTTGAAGCATAGCT+CGG | 0.603333 | 4.1:-34560270 | None:intergenic |
| CAGGACACCAATTGGACCAA+GGG | 0.618127 | 4.1:+34561089 | MS.gene056351:CDS |
| AATTCAAGACACCAAAGTAG+AGG | 0.621817 | 4.1:-34557873 | None:intergenic |
| TGGCTATTTGTTTATCCAAG+AGG | 0.623134 | 4.1:+34561248 | MS.gene056351:CDS |
| CTTGGATAAACAAATAGCCA+AGG | 0.629406 | 4.1:-34561245 | None:intergenic |
| GCCTCTTCAAGTGATAGCGT+TGG | 0.633794 | 4.1:-34561602 | None:intergenic |
| TACTACGGTTTAGAGAAGTA+CGG | 0.651396 | 4.1:-34557957 | None:intergenic |
| AGGAGAGTATCCATCAAGCA+TGG | 0.653040 | 4.1:+34560733 | MS.gene056351:CDS |
| GAAGGTGCTGCAAATGAAGG+TGG | 0.659790 | 4.1:+34558276 | MS.gene056351:CDS |
| AGCAAGGAGTTGGTTGTGTG+AGG | 0.661595 | 4.1:-34560366 | None:intergenic |
| ACAGGACACCAATTGGACCA+AGG | 0.667972 | 4.1:+34561088 | MS.gene056351:CDS |
| GTACCCAAACTGTAAGAGTG+TGG | 0.677255 | 4.1:-34560329 | None:intergenic |
| TCTAACGTGTCATTTGAGAA+CGG | 0.686339 | 4.1:-34560564 | None:intergenic |
| GCGTTACAAGACGAGTACAG+CGG | 0.732635 | 4.1:+34559994 | MS.gene056351:CDS |
| ACGCTTGGGGAAGATCCCAG+TGG | 0.749355 | 4.1:-34559975 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTAATAATTAAATTT+AGG | + | chr4.1:34561560-34561579 | MS.gene056351:intron | 0.0% |
| !! | TTAATAATTAAATTTAGGTA+TGG | + | chr4.1:34561565-34561584 | MS.gene056351:intron | 10.0% |
| !! | AAATTGAGATAATTAAAGAA+AGG | - | chr4.1:34558372-34558391 | None:intergenic | 15.0% |
| !! | AAGCAATAATAATAAATTGA+TGG | + | chr4.1:34560066-34560085 | MS.gene056351:intron | 15.0% |
| !! | ATCCTATTAAAATGTAAAAA+TGG | - | chr4.1:34559600-34559619 | None:intergenic | 15.0% |
| !! | ATTTCATACAGAAAAAATAT+TGG | + | chr4.1:34559345-34559364 | MS.gene056351:intron | 15.0% |
| !! | TTTCTTTAATTATCTCAATT+TGG | + | chr4.1:34558371-34558390 | MS.gene056351:intron | 15.0% |
| !!! | AAAATGCTTTTATATCAAAT+TGG | - | chr4.1:34559424-34559443 | None:intergenic | 15.0% |
| !!! | AAATTTTTGTCTAGTATATA+TGG | + | chr4.1:34559571-34559590 | MS.gene056351:intron | 15.0% |
| !!! | AACCATTTTTACATTTTAAT+AGG | + | chr4.1:34559595-34559614 | MS.gene056351:intron | 15.0% |
| !!! | CAAGTTATTTTAATTTTGAA+GGG | - | chr4.1:34558421-34558440 | None:intergenic | 15.0% |
| !!! | TATATTCCTTTAACTTTTTA+TGG | - | chr4.1:34559227-34559246 | None:intergenic | 15.0% |
| !!! | TCAAGTTATTTTAATTTTGA+AGG | - | chr4.1:34558422-34558441 | None:intergenic | 15.0% |
| !! | AAAACCTCATAAATAGTTAA+GGG | - | chr4.1:34558604-34558623 | None:intergenic | 20.0% |
| !! | AATCATAACAAATACAAGAA+AGG | - | chr4.1:34560454-34560473 | None:intergenic | 20.0% |
| !! | AATTGAAGCTTAAGAAATAT+TGG | + | chr4.1:34558209-34558228 | MS.gene056351:intron | 20.0% |
| !! | ATCATAGTAATGTAAATTGA+TGG | + | chr4.1:34559913-34559932 | MS.gene056351:intron | 20.0% |
| !! | ATGCAACTTACATAATATTA+GGG | - | chr4.1:34560029-34560048 | None:intergenic | 20.0% |
| !! | ATTATTTGATTGTGGTATAT+TGG | - | chr4.1:34560867-34560886 | None:intergenic | 20.0% |
| !! | ATTGATGGAATTATTGATAT+AGG | + | chr4.1:34559928-34559947 | MS.gene056351:intron | 20.0% |
| !! | CTTTAACTAACTCAAATTAA+TGG | + | chr4.1:34560484-34560503 | MS.gene056351:intron | 20.0% |
| !! | GAAAAAAAAAGAAATATACC+TGG | - | chr4.1:34558342-34558361 | None:intergenic | 20.0% |
| !! | GAATTAAAAGTTAACACAAT+TGG | - | chr4.1:34558695-34558714 | None:intergenic | 20.0% |
| !! | GTAATATATAATTCTTCACT+AGG | - | chr4.1:34560962-34560981 | None:intergenic | 20.0% |
| !! | TAAAACCTCATAAATAGTTA+AGG | - | chr4.1:34558605-34558624 | None:intergenic | 20.0% |
| !! | TAAAACGAAACAAATTAATG+AGG | - | chr4.1:34558761-34558780 | None:intergenic | 20.0% |
| !! | TCAAATATGATTATCTTGAA+TGG | + | chr4.1:34559158-34559177 | MS.gene056351:intron | 20.0% |
| !! | TTGATTTACATAACAGAAAA+TGG | + | chr4.1:34561317-34561336 | MS.gene056351:CDS | 20.0% |
| !!! | AAAAAGCAAAGATCAATTTT+AGG | + | chr4.1:34558560-34558579 | MS.gene056351:intron | 20.0% |
| !!! | AAACATACATTAGATGATTT+TGG | - | chr4.1:34558083-34558102 | None:intergenic | 20.0% |
| !!! | AATTCAACATTTGTTATACT+TGG | - | chr4.1:34559692-34559711 | None:intergenic | 20.0% |
| !!! | ATTATACAATTGATTTGACT+GGG | - | chr4.1:34561534-34561553 | None:intergenic | 20.0% |
| !!! | ATTGGTTCATTTGATTTTAT+TGG | + | chr4.1:34560812-34560831 | MS.gene056351:CDS | 20.0% |
| !!! | ATTTTTCTATCAATGGTTTA+AGG | - | chr4.1:34561015-34561034 | None:intergenic | 20.0% |
| !!! | CTATTTATGAGGTTTTATAT+TGG | + | chr4.1:34558608-34558627 | MS.gene056351:intron | 20.0% |
| !!! | TATTATACAATTGATTTGAC+TGG | - | chr4.1:34561535-34561554 | None:intergenic | 20.0% |
| !!! | TTGAGTTAGTTAAAGTTTTT+CGG | - | chr4.1:34560479-34560498 | None:intergenic | 20.0% |
| !!! | TTTTAATTAAGGTTCGAATT+AGG | + | chr4.1:34559098-34559117 | MS.gene056351:intron | 20.0% |
| !!! | TTTTCAGAAGAAGAAAAAAA+AGG | - | chr4.1:34558791-34558810 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTATGTAAATCAA+AGG | - | chr4.1:34561317-34561336 | None:intergenic | 20.0% |
| ! | AAACAAATTAATGAGGTCAT+TGG | - | chr4.1:34558754-34558773 | None:intergenic | 25.0% |
| ! | ACAAATACAAGAAAGGTTTA+TGG | - | chr4.1:34560447-34560466 | None:intergenic | 25.0% |
| ! | ACTAGAAATGCATGATATAA+TGG | - | chr4.1:34558819-34558838 | None:intergenic | 25.0% |
| ! | ATCAATGAACTACTTGATAA+TGG | + | chr4.1:34559856-34559875 | MS.gene056351:CDS | 25.0% |
| ! | ATGAAACTTTAGGTGAATAA+AGG | - | chr4.1:34559724-34559743 | None:intergenic | 25.0% |
| ! | ATTGAGAGTAAGAAAAGATT+AGG | - | chr4.1:34561486-34561505 | None:intergenic | 25.0% |
| ! | CAATATATTAGAGCTTCATA+AGG | - | chr4.1:34559546-34559565 | None:intergenic | 25.0% |
| ! | CATACAGAAAAAATATTGGA+TGG | + | chr4.1:34559349-34559368 | MS.gene056351:intron | 25.0% |
| ! | CATGCAACTTACATAATATT+AGG | - | chr4.1:34560030-34560049 | None:intergenic | 25.0% |
| ! | CTAATATTATGTAAGTTGCA+TGG | + | chr4.1:34560028-34560047 | MS.gene056351:intron | 25.0% |
| ! | TAACGTAGGAAAAATTAAGA+AGG | - | chr4.1:34559044-34559063 | None:intergenic | 25.0% |
| ! | TAATCCCTTAACTATTTATG+AGG | + | chr4.1:34558597-34558616 | MS.gene056351:intron | 25.0% |
| ! | TAATGTAGTAATTGCCTAAT+TGG | + | chr4.1:34559318-34559337 | MS.gene056351:intron | 25.0% |
| ! | TCGAACCTTAATTAAAAAGT+AGG | - | chr4.1:34559095-34559114 | None:intergenic | 25.0% |
| ! | TGTAATATTTGATTCCTTCT+TGG | - | chr4.1:34559828-34559847 | None:intergenic | 25.0% |
| ! | TGTATAAATGTCAATACATG+CGG | - | chr4.1:34561186-34561205 | None:intergenic | 25.0% |
| ! | TGTATGAAATTACACCAATT+AGG | - | chr4.1:34559335-34559354 | None:intergenic | 25.0% |
| !! | AATTTTCATTCTTAAGAGAG+AGG | + | chr4.1:34561457-34561476 | MS.gene056351:intron | 25.0% |
| !! | ACATATATAGTCCTTTGTTT+GGG | - | chr4.1:34559200-34559219 | None:intergenic | 25.0% |
| !! | GATAGAAAAATCAACTTGTT+TGG | + | chr4.1:34561024-34561043 | MS.gene056351:intron | 25.0% |
| !! | TTCTTAATTTTTCCTACGTT+AGG | + | chr4.1:34559043-34559062 | MS.gene056351:intron | 25.0% |
| !! | TTTCCTAATGGTTTCATTTT+TGG | + | chr4.1:34557982-34558001 | MS.gene056351:CDS | 25.0% |
| !!! | ACTTTAAGACCAAAGATTTA+GGG | + | chr4.1:34558170-34558189 | MS.gene056351:intron | 25.0% |
| !!! | ACTTTTAATTCCAATGTCTA+AGG | + | chr4.1:34558704-34558723 | MS.gene056351:intron | 25.0% |
| !!! | ATATTGGAGGTTAATTTGTA+AGG | + | chr4.1:34558225-34558244 | MS.gene056351:intron | 25.0% |
| !!! | ATGAAAAATAAAAGTGTTGC+AGG | + | chr4.1:34558442-34558461 | MS.gene056351:intron | 25.0% |
| !!! | CAAGTTGATTTTTCTATCAA+TGG | - | chr4.1:34561022-34561041 | None:intergenic | 25.0% |
| !!! | CACAACCTACTTTTTAATTA+AGG | + | chr4.1:34559087-34559106 | MS.gene056351:intron | 25.0% |
| !!! | GAATTGTTATTTCATATCAG+TGG | - | chr4.1:34558868-34558887 | None:intergenic | 25.0% |
| !!! | TACTTTAAGACCAAAGATTT+AGG | + | chr4.1:34558169-34558188 | MS.gene056351:intron | 25.0% |
| !!! | TGTTTGGTGTAAACTATTAA+TGG | + | chr4.1:34561040-34561059 | MS.gene056351:intron | 25.0% |
| AACCATTAGGAAAACTACTA+CGG | - | chr4.1:34557975-34557994 | None:intergenic | 30.0% | |
| AAGAAAGGTTTATGGTTCTT+CGG | - | chr4.1:34560439-34560458 | None:intergenic | 30.0% | |
| AATATGTAATTGATCCCACA+TGG | + | chr4.1:34560173-34560192 | MS.gene056351:intron | 30.0% | |
| ACAGAAAAAATATTGGATGG+AGG | + | chr4.1:34559352-34559371 | MS.gene056351:intron | 30.0% | |
| ACTTTATAGAACCAATCATC+AGG | + | chr4.1:34560406-34560425 | MS.gene056351:CDS | 30.0% | |
| ATATGTAATTGATCCCACAT+GGG | + | chr4.1:34560174-34560193 | MS.gene056351:intron | 30.0% | |
| CAAAAACCAGTGACAATTTA+AGG | - | chr4.1:34560544-34560563 | None:intergenic | 30.0% | |
| CAAACAAAGGACTATATATG+TGG | + | chr4.1:34559199-34559218 | MS.gene056351:intron | 30.0% | |
| CAAAGTAGAGGAAATATTGA+TGG | - | chr4.1:34557864-34557883 | None:intergenic | 30.0% | |
| CACAATTGTTCACAAAATCA+TGG | + | chr4.1:34560646-34560665 | MS.gene056351:intron | 30.0% | |
| CACATATATAGTCCTTTGTT+TGG | - | chr4.1:34559201-34559220 | None:intergenic | 30.0% | |
| CATCAATATTTCCTCTACTT+TGG | + | chr4.1:34557862-34557881 | MS.gene056351:CDS | 30.0% | |
| CTAAATATGGATGTCTCTTT+CGG | - | chr4.1:34559125-34559144 | None:intergenic | 30.0% | |
| GTACCAAAAATGAAACCATT+AGG | - | chr4.1:34557988-34558007 | None:intergenic | 30.0% | |
| GTGGAACCATAAAAAGTTAA+AGG | + | chr4.1:34559218-34559237 | MS.gene056351:intron | 30.0% | |
| GTTATACTTGGCAATATTCT+TGG | - | chr4.1:34559680-34559699 | None:intergenic | 30.0% | |
| TAACTCAAATTAATGGCATC+AGG | + | chr4.1:34560491-34560510 | MS.gene056351:intron | 30.0% | |
| TATCAAGTAGTTCATTGATC+AGG | - | chr4.1:34559855-34559874 | None:intergenic | 30.0% | |
| TCACCTAAAGTTTCATCTAT+AGG | + | chr4.1:34559728-34559747 | MS.gene056351:intron | 30.0% | |
| TCACCTATAGATGAAACTTT+AGG | - | chr4.1:34559734-34559753 | None:intergenic | 30.0% | |
| TGAAGCTTAAGAAATATTGG+AGG | + | chr4.1:34558212-34558231 | MS.gene056351:intron | 30.0% | |
| TGATCAGTATCATCGTTATA+AGG | + | chr4.1:34559393-34559412 | MS.gene056351:CDS | 30.0% | |
| TGGAATTATTGATATAGGTC+TGG | + | chr4.1:34559933-34559952 | MS.gene056351:intron | 30.0% | |
| TGTCGTCATAATACTTATGT+TGG | + | chr4.1:34558484-34558503 | MS.gene056351:intron | 30.0% | |
| ! | AAAATTTTACAAAACGCACC+TGG | - | chr4.1:34558026-34558045 | None:intergenic | 30.0% |
| ! | AATGAAGGTATAAACCAAGA+AGG | + | chr4.1:34559811-34559830 | MS.gene056351:CDS | 30.0% |
| ! | CAATTTGGTGAATAATAGCT+TGG | + | chr4.1:34558386-34558405 | MS.gene056351:intron | 30.0% |
| ! | CTTGTGTCATTATTTGATTG+TGG | - | chr4.1:34560875-34560894 | None:intergenic | 30.0% |
| ! | TATATTGGAAGCATAATTGG+AGG | - | chr4.1:34560852-34560871 | None:intergenic | 30.0% |
| ! | TGGTATATTGGAAGCATAAT+TGG | - | chr4.1:34560855-34560874 | None:intergenic | 30.0% |
| !! | AGCTCTAAAAAATATGCAGA+AGG | + | chr4.1:34559781-34559800 | MS.gene056351:intron | 30.0% |
| !! | GTGTTGATAATGTAGTATGA+AGG | + | chr4.1:34558258-34558277 | MS.gene056351:intron | 30.0% |
| !! | TTGTTATTTCATATCAGTGG+TGG | - | chr4.1:34558865-34558884 | None:intergenic | 30.0% |
| AAAATATTGGATGGAGGCAA+TGG | + | chr4.1:34559358-34559377 | MS.gene056351:CDS | 35.0% | |
| AAATATGCTCATGAACATCC+AGG | + | chr4.1:34558321-34558340 | MS.gene056351:CDS | 35.0% | |
| AAGAAACGACACTTATGTAC+AGG | + | chr4.1:34561214-34561233 | MS.gene056351:intron | 35.0% | |
| AATATCGCTTGAGAAAGAAG+AGG | + | chr4.1:34559004-34559023 | MS.gene056351:intron | 35.0% | |
| AATTCAAGACACCAAAGTAG+AGG | - | chr4.1:34557876-34557895 | None:intergenic | 35.0% | |
| AATTGGACCAACTTGACTAA+CGG | - | chr4.1:34558678-34558697 | None:intergenic | 35.0% | |
| CAAATTAATGAGGTCATTGG+TGG | - | chr4.1:34558751-34558770 | None:intergenic | 35.0% | |
| CTCTTGATTTCATGTTTGGA+TGG | + | chr4.1:34560607-34560626 | MS.gene056351:CDS | 35.0% | |
| CTTGGATAAACAAATAGCCA+AGG | - | chr4.1:34561248-34561267 | None:intergenic | 35.0% | |
| GACGTCATAAAGTTCTATCA+TGG | - | chr4.1:34560147-34560166 | None:intergenic | 35.0% | |
| GACTACTTTCAGTAACAACA+TGG | - | chr4.1:34559276-34559295 | None:intergenic | 35.0% | |
| GATGTGTCAGACACTAAATA+TGG | - | chr4.1:34559138-34559157 | None:intergenic | 35.0% | |
| GCAGAAGGAAAAGTAAATGA+AGG | + | chr4.1:34559796-34559815 | MS.gene056351:intron | 35.0% | |
| GCTTCTCAAAATGGTTCAAT+TGG | + | chr4.1:34560513-34560532 | MS.gene056351:CDS | 35.0% | |
| GGCTATTTGTTTATCCAAGA+GGG | + | chr4.1:34561249-34561268 | MS.gene056351:CDS | 35.0% | |
| TAAGACCAAAGATTTAGGGA+TGG | + | chr4.1:34558174-34558193 | MS.gene056351:intron | 35.0% | |
| TACTACGGTTTAGAGAAGTA+CGG | - | chr4.1:34557960-34557979 | None:intergenic | 35.0% | |
| TAGCTCCTTTGTTCCAATAA+TGG | + | chr4.1:34557903-34557922 | MS.gene056351:CDS | 35.0% | |
| TATGTAATTGATCCCACATG+GGG | + | chr4.1:34560175-34560194 | MS.gene056351:intron | 35.0% | |
| TCATTCCATCCCTAAATCTT+TGG | - | chr4.1:34558182-34558201 | None:intergenic | 35.0% | |
| TGAGTATCCTTGAAATATCC+AGG | - | chr4.1:34560902-34560921 | None:intergenic | 35.0% | |
| TGGCTATTTGTTTATCCAAG+AGG | + | chr4.1:34561248-34561267 | MS.gene056351:CDS | 35.0% | |
| TTCACTAGGAATTGTGATCA+AGG | - | chr4.1:34560948-34560967 | None:intergenic | 35.0% | |
| TTGAGAAAGAAGAGGAATTG+AGG | + | chr4.1:34559012-34559031 | MS.gene056351:intron | 35.0% | |
| ! | AACCGTAGTAGTTTTCCTAA+TGG | + | chr4.1:34557970-34557989 | MS.gene056351:CDS | 35.0% |
| ! | CATACGCAGAAATGATTTTC+AGG | + | chr4.1:34560241-34560260 | MS.gene056351:intron | 35.0% |
| ! | GAGCAATCTAAGATGCTTAT+TGG | + | chr4.1:34560794-34560813 | MS.gene056351:CDS | 35.0% |
| ! | TGACTAACGGATGTAAGTTA+TGG | - | chr4.1:34558665-34558684 | None:intergenic | 35.0% |
| ! | TGGAAGAGGACAAAGTATTT+GGG | + | chr4.1:34558296-34558315 | MS.gene056351:CDS | 35.0% |
| !! | AATAAAAGTGTTGCAGGTGA+TGG | + | chr4.1:34558448-34558467 | MS.gene056351:intron | 35.0% |
| !! | TCTAACGTGTCATTTGAGAA+CGG | - | chr4.1:34560567-34560586 | None:intergenic | 35.0% |
| AAGCACACCTGGATATTTCA+AGG | + | chr4.1:34560892-34560911 | MS.gene056351:CDS | 40.0% | |
| AAGCATCTTAGATTGCTCAC+TGG | - | chr4.1:34560792-34560811 | None:intergenic | 40.0% | |
| AATAATGACACAAGCACACC+TGG | + | chr4.1:34560881-34560900 | MS.gene056351:CDS | 40.0% | |
| AATAGTCAAGAGTTGCACGT+AGG | - | chr4.1:34558956-34558975 | None:intergenic | 40.0% | |
| ACACTCTTACAGTTTGGGTA+CGG | + | chr4.1:34560331-34560350 | MS.gene056351:CDS | 40.0% | |
| ACGTTAGGCAACAAATACCT+CGG | + | chr4.1:34559058-34559077 | MS.gene056351:intron | 40.0% | |
| AGAAACCATATATCCCCATG+TGG | - | chr4.1:34560191-34560210 | None:intergenic | 40.0% | |
| AGAAGTTCTTGAATCCCTCT+TGG | - | chr4.1:34561266-34561285 | None:intergenic | 40.0% | |
| CAATATTCTTGGCCAAGAGA+TGG | - | chr4.1:34559669-34559688 | None:intergenic | 40.0% | |
| CATACAGATTCTCCATCTCT+TGG | + | chr4.1:34559654-34559673 | MS.gene056351:CDS | 40.0% | |
| CGTACAAGAAACCCAAACAA+AGG | + | chr4.1:34559186-34559205 | MS.gene056351:intron | 40.0% | |
| CGTGCTCTTGATTTCATGTT+TGG | + | chr4.1:34560603-34560622 | MS.gene056351:CDS | 40.0% | |
| CTTACATCCGTTAGTCAAGT+TGG | + | chr4.1:34558668-34558687 | MS.gene056351:intron | 40.0% | |
| GAAACCATATATCCCCATGT+GGG | - | chr4.1:34560190-34560209 | None:intergenic | 40.0% | |
| GAATTCCTTGAAGCATAGCT+CGG | - | chr4.1:34560273-34560292 | None:intergenic | 40.0% | |
| GAGCTATGCTTCAAGGAATT+CGG | + | chr4.1:34560272-34560291 | MS.gene056351:CDS | 40.0% | |
| GCATCACCTTAAATTGTCAC+TGG | + | chr4.1:34560535-34560554 | MS.gene056351:CDS | 40.0% | |
| TGCTGCCATTATTGGAACAA+AGG | - | chr4.1:34557911-34557930 | None:intergenic | 40.0% | |
| TTTATGCAGCCAATGACAAC+AGG | + | chr4.1:34560713-34560732 | MS.gene056351:CDS | 40.0% | |
| ! | AGGTATTTGTTGCCTAACGT+AGG | - | chr4.1:34559058-34559077 | None:intergenic | 40.0% |
| ! | ATTTGTGACCCTTTTCCACT+GGG | + | chr4.1:34559960-34559979 | MS.gene056351:CDS | 40.0% |
| ! | CATGAAATCAAGAGCACGTT+CGG | - | chr4.1:34560601-34560620 | None:intergenic | 40.0% |
| ! | GTGGAAGAGGACAAAGTATT+TGG | + | chr4.1:34558295-34558314 | MS.gene056351:CDS | 40.0% |
| !! | TATGAAGGTGCTGCAAATGA+AGG | + | chr4.1:34558273-34558292 | MS.gene056351:CDS | 40.0% |
| AAGAGAGTCTTACTCACCCT+TGG | - | chr4.1:34561108-34561127 | None:intergenic | 45.0% | |
| ACGAAAGACACCATGCTTGA+TGG | - | chr4.1:34560746-34560765 | None:intergenic | 45.0% | |
| ATCAAGCATGGTGTCTTTCG+TGG | + | chr4.1:34560745-34560764 | MS.gene056351:CDS | 45.0% | |
| CAGTGGAAAAGGGTCACAAA+TGG | - | chr4.1:34559961-34559980 | None:intergenic | 45.0% | |
| CGTGTGTTCACCTTAGACAT+TGG | - | chr4.1:34558717-34558736 | None:intergenic | 45.0% | |
| CGTTAGGCAACAAATACCTC+GGG | + | chr4.1:34559059-34559078 | MS.gene056351:intron | 45.0% | |
| GAGCCACACTCTTACAGTTT+GGG | + | chr4.1:34560326-34560345 | MS.gene056351:CDS | 45.0% | |
| GATTGCTCACTGGTGAACTT+TGG | - | chr4.1:34560782-34560801 | None:intergenic | 45.0% | |
| GGATACTCTCCTGTTGTCAT+TGG | - | chr4.1:34560725-34560744 | None:intergenic | 45.0% | |
| GTAACAGCTGCTGCCATTAT+TGG | - | chr4.1:34557919-34557938 | None:intergenic | 45.0% | |
| GTACCCAAACTGTAAGAGTG+TGG | - | chr4.1:34560332-34560351 | None:intergenic | 45.0% | |
| GTACTCGTCTTGTAACGCTT+GGG | - | chr4.1:34559992-34560011 | None:intergenic | 45.0% | |
| TACAAAACGCACCTGGTAAG+AGG | - | chr4.1:34558019-34558038 | None:intergenic | 45.0% | |
| TACTCGTCTTGTAACGCTTG+GGG | - | chr4.1:34559991-34560010 | None:intergenic | 45.0% | |
| TCAAGCATGGTGTCTTTCGT+GGG | + | chr4.1:34560746-34560765 | MS.gene056351:CDS | 45.0% | |
| TCCAACGCTATCACTTGAAG+AGG | + | chr4.1:34561601-34561620 | MS.gene056351:CDS | 45.0% | |
| TGAGCCACACTCTTACAGTT+TGG | + | chr4.1:34560325-34560344 | MS.gene056351:CDS | 45.0% | |
| TGATCCCACATGGGGATATA+TGG | + | chr4.1:34560183-34560202 | MS.gene056351:intron | 45.0% | |
| TGCACGTAGGAGATGAGAAA+TGG | - | chr4.1:34558943-34558962 | None:intergenic | 45.0% | |
| TGGCATCAGGCTTCTCAAAA+TGG | + | chr4.1:34560504-34560523 | MS.gene056351:intron | 45.0% | |
| TGTACTCGTCTTGTAACGCT+TGG | - | chr4.1:34559993-34560012 | None:intergenic | 45.0% | |
| TTACTCACCCTTGGTCCAAT+TGG | - | chr4.1:34561099-34561118 | None:intergenic | 45.0% | |
| TTTGGGTACGGAACCTTACA+TGG | + | chr4.1:34560343-34560362 | MS.gene056351:CDS | 45.0% | |
| ! | CATTTGTGACCCTTTTCCAC+TGG | + | chr4.1:34559959-34559978 | MS.gene056351:CDS | 45.0% |
| ! | GTAAGAGTGTGGCTCATTGA+GGG | - | chr4.1:34560321-34560340 | None:intergenic | 45.0% |
| ! | GTACGGTCAACAAGTGTTGT+AGG | - | chr4.1:34557943-34557962 | None:intergenic | 45.0% |
| ! | TGTAAGAGTGTGGCTCATTG+AGG | - | chr4.1:34560322-34560341 | None:intergenic | 45.0% |
| ! | TTTTGACAGCTGAGCGTAAC+AGG | + | chr4.1:34561070-34561089 | MS.gene056351:intron | 45.0% |
| !! | AGGAGAGTATCCATCAAGCA+TGG | + | chr4.1:34560733-34560752 | MS.gene056351:CDS | 45.0% |
| !!! | ATAAATAAGATTTTAAATTA+TGG | - | chr4.1:34560690-34560709 | None:intergenic | 5.0% |
| !!! | TAAATAAGATTTTAAATTAT+GGG | - | chr4.1:34560689-34560708 | None:intergenic | 5.0% |
| !!! | TAATTTAAAATCTTATTTAT+AGG | + | chr4.1:34560690-34560709 | MS.gene056351:intron | 5.0% |
| ACAGGACACCAATTGGACCA+AGG | + | chr4.1:34561088-34561107 | MS.gene056351:CDS | 50.0% | |
| CAGGACACCAATTGGACCAA+GGG | + | chr4.1:34561089-34561108 | MS.gene056351:CDS | 50.0% | |
| CTATGCCGAGCTATGCTTCA+AGG | + | chr4.1:34560265-34560284 | MS.gene056351:CDS | 50.0% | |
| GAGCGTAACAGGACACCAAT+TGG | + | chr4.1:34561081-34561100 | MS.gene056351:CDS | 50.0% | |
| GCGTTACAAGACGAGTACAG+CGG | + | chr4.1:34559994-34560013 | MS.gene056351:CDS | 50.0% | |
| GCTGCAAATGAAGGTGGAAG+AGG | + | chr4.1:34558282-34558301 | MS.gene056351:CDS | 50.0% | |
| GGGAAGATCCCAGTGGAAAA+GGG | - | chr4.1:34559971-34559990 | None:intergenic | 50.0% | |
| TACTGCCTCATCCTCTTACC+AGG | + | chr4.1:34558005-34558024 | MS.gene056351:CDS | 50.0% | |
| TCGGAGACAGAGTGAAGCAT+TGG | + | chr4.1:34560291-34560310 | MS.gene056351:CDS | 50.0% | |
| TGGTTGTGTGAGGCCATGTA+AGG | - | chr4.1:34560359-34560378 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGTTGGTTGTGTG+AGG | - | chr4.1:34560369-34560388 | None:intergenic | 50.0% |
| ! | GCCTCTTCAAGTGATAGCGT+TGG | - | chr4.1:34561605-34561624 | None:intergenic | 50.0% |
| !! | ATCACTTGAAGAGGCGCTCA+TGG | + | chr4.1:34561610-34561629 | MS.gene056351:CDS | 50.0% |
| !! | GAAGGTGCTGCAAATGAAGG+TGG | + | chr4.1:34558276-34558295 | MS.gene056351:CDS | 50.0% |
| !! | GTGTTGCAGGTGATGGAGTT+AGG | + | chr4.1:34558455-34558474 | MS.gene056351:intron | 50.0% |
| !! | TCGGTGTTGCACCTGATGAT+TGG | - | chr4.1:34560420-34560439 | None:intergenic | 50.0% |
| ACGCACCTGGTAAGAGGATG+AGG | - | chr4.1:34558013-34558032 | None:intergenic | 55.0% | |
| ATGTACAGGCTGCTTCGCCT+TGG | + | chr4.1:34561228-34561247 | MS.gene056351:intron | 55.0% | |
| CAGCTGCATGAGCAAGGAGT+TGG | - | chr4.1:34560379-34560398 | None:intergenic | 55.0% | |
| GGGGAAGATCCCAGTGGAAA+AGG | - | chr4.1:34559972-34559991 | None:intergenic | 55.0% | |
| TGACAGCAGCTGCATGAGCA+AGG | - | chr4.1:34560385-34560404 | None:intergenic | 55.0% | |
| ACGCTTGGGGAAGATCCCAG+TGG | - | chr4.1:34559978-34559997 | None:intergenic | 60.0% | |
| AGTAGGTTGTGTAGCGCCCG+AGG | - | chr4.1:34559078-34559097 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 34557847 | 34561694 | 34557847 | ID=MS.gene056351 |
| chr4.1 | mRNA | 34557847 | 34561694 | 34557847 | ID=MS.gene056351.t1;Parent=MS.gene056351 |
| chr4.1 | exon | 34557847 | 34558026 | 34557847 | ID=MS.gene056351.t1.exon1;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34557847 | 34558026 | 34557847 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34558273 | 34558342 | 34558273 | ID=MS.gene056351.t1.exon2;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34558273 | 34558342 | 34558273 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34559356 | 34559414 | 34559356 | ID=MS.gene056351.t1.exon3;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34559356 | 34559414 | 34559356 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34559617 | 34559692 | 34559617 | ID=MS.gene056351.t1.exon4;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34559617 | 34559692 | 34559617 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34559800 | 34559877 | 34559800 | ID=MS.gene056351.t1.exon5;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34559800 | 34559877 | 34559800 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34559950 | 34560037 | 34559950 | ID=MS.gene056351.t1.exon6;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34559950 | 34560037 | 34559950 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34560250 | 34560427 | 34560250 | ID=MS.gene056351.t1.exon7;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34560250 | 34560427 | 34560250 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34560513 | 34560628 | 34560513 | ID=MS.gene056351.t1.exon8;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34560513 | 34560628 | 34560513 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34560712 | 34560935 | 34560712 | ID=MS.gene056351.t1.exon9;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34560712 | 34560935 | 34560712 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34561079 | 34561110 | 34561079 | ID=MS.gene056351.t1.exon10;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34561079 | 34561110 | 34561079 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34561236 | 34561338 | 34561236 | ID=MS.gene056351.t1.exon11;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34561236 | 34561338 | 34561236 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| chr4.1 | exon | 34561582 | 34561694 | 34561582 | ID=MS.gene056351.t1.exon12;Parent=MS.gene056351.t1 |
| chr4.1 | CDS | 34561582 | 34561694 | 34561582 | ID=cds.MS.gene056351.t1;Parent=MS.gene056351.t1 |
| Gene Sequence |
| Protein sequence |
