Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57420.t1 | XP_003630314.1 | 96.3 | 217 | 8 | 0 | 1 | 217 | 116 | 332 | 4.50E-111 | 410.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57420.t1 | G7LEY0 | 96.3 | 217 | 8 | 0 | 1 | 217 | 116 | 332 | 3.2e-111 | 410.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050529 | MS.gene57420 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene57420 | 0.829916 | 3.94E-55 | -1.69E-46 |
| MS.gene053107 | MS.gene57420 | 0.818815 | 1.61E-52 | -1.69E-46 |
| MS.gene053579 | MS.gene57420 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene57420 | 0.818028 | 2.43E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene57420 | 0.822614 | 2.16E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene57420 | 0.80357 | 3.27E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57420.t1 | MTR_8g094200 | 96.313 | 217 | 8 | 0 | 1 | 217 | 116 | 332 | 1.26e-156 | 437 |
| MS.gene57420.t1 | MTR_8g094200 | 89.831 | 177 | 18 | 0 | 1 | 177 | 116 | 292 | 9.95e-119 | 339 |
| MS.gene57420.t1 | MTR_3g096860 | 64.762 | 210 | 72 | 1 | 3 | 212 | 101 | 308 | 1.04e-103 | 302 |
| MS.gene57420.t1 | MTR_3g096860 | 60.215 | 186 | 72 | 1 | 3 | 188 | 101 | 284 | 2.49e-84 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57420.t1 | AT4G33480 | 68.720 | 211 | 65 | 1 | 3 | 212 | 124 | 334 | 2.83e-102 | 299 |
Find 48 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAACCCGGTGGGAGGTTC+CGG | 0.321014 | 4.2:-8561318 | None:intergenic |
| TCCTGATGATATGCCGTTGC+CGG | 0.337706 | 4.2:+8561299 | None:intergenic |
| AAATTCAGTCTCCTCGTCTA+TGG | 0.365085 | 4.2:-8565997 | None:intergenic |
| TTAATTACTTACGTGTCAAC+CGG | 0.369775 | 4.2:-8561568 | None:intergenic |
| CATTTGTGAACAGGACTTGC+TGG | 0.414686 | 4.2:+8565953 | MS.gene57420:intron |
| TTCTGCTTACTTCAACAAAT+CGG | 0.416331 | 4.2:+8561361 | MS.gene57420:CDS |
| TTCCGTTGGAGTGTGTGGTT+CGG | 0.440368 | 4.2:+8561500 | MS.gene57420:CDS |
| TTATTTGTGCAGGGTGAGAA+TGG | 0.443645 | 4.2:+8565572 | MS.gene57420:intron |
| GGAGACTGAATTTAATGCCT+TGG | 0.472300 | 4.2:+8566007 | MS.gene57420:CDS |
| TCCAACGGAAGGTTATTCAT+AGG | 0.482809 | 4.2:-8561487 | None:intergenic |
| GGGTTTGCCATTGACGAAAA+CGG | 0.491547 | 4.2:+8561333 | MS.gene57420:CDS |
| CCGTTGCCGGAACCTCCCAC+CGG | 0.491708 | 4.2:+8561312 | MS.gene57420:CDS |
| AACAAGATGCATGTGTATCT+TGG | 0.502259 | 4.2:-8562660 | None:intergenic |
| GACTGAATTTAATGCCTTGG+TGG | 0.506705 | 4.2:+8566010 | MS.gene57420:CDS |
| TGAATGTATGTTGCTTTGCC+CGG | 0.514398 | 4.2:+8561549 | MS.gene57420:CDS |
| GCGAGCGCATACGCTGCAGC+AGG | 0.519080 | 4.2:-8562638 | None:intergenic |
| TCCTATGAATAACCTTCCGT+TGG | 0.519345 | 4.2:+8561486 | MS.gene57420:CDS |
| GTGCTCTTCAATATTTGCAC+AGG | 0.520741 | 4.2:-8561679 | None:intergenic |
| ACTTCAGTTTGTTGTTGTGA+AGG | 0.541807 | 4.2:+8564661 | MS.gene57420:CDS |
| ACATGCATCTTGTTTACAGC+GGG | 0.542894 | 4.2:+8562669 | MS.gene57420:CDS |
| CCGGTGGGAGGTTCCGGCAA+CGG | 0.543817 | 4.2:-8561312 | None:intergenic |
| TGCACTTATTGAAGCAATGA+TGG | 0.547958 | 4.2:+8566291 | MS.gene57420:CDS |
| CGTTGCCGGAACCTCCCACC+GGG | 0.548585 | 4.2:+8561313 | MS.gene57420:CDS |
| TATTTGTGCAGGGTGAGAAT+GGG | 0.556129 | 4.2:+8565573 | MS.gene57420:intron |
| CTTACAGCTGACCATCCATC+AGG | 0.563519 | 4.2:-8561703 | None:intergenic |
| TAATTACTTACGTGTCAACC+GGG | 0.577475 | 4.2:-8561567 | None:intergenic |
| TCTATGGCGTCAATGACAGC+AGG | 0.580809 | 4.2:-8565981 | None:intergenic |
| TAACCTTCCGTTGGAGTGTG+TGG | 0.581027 | 4.2:+8561495 | MS.gene57420:CDS |
| TTCACAACAACAAACTGAAG+TGG | 0.585546 | 4.2:-8564659 | None:intergenic |
| TTCGTCAATGGCAAACCCGG+TGG | 0.591270 | 4.2:-8561328 | None:intergenic |
| ATATTGAAGAGCACACCTGA+TGG | 0.594346 | 4.2:+8561688 | MS.gene57420:CDS |
| TGCAGATGATGGTAATGAAG+TGG | 0.597707 | 4.2:+8563837 | MS.gene57420:intron |
| TGAAGAGCACACCTGATGGA+TGG | 0.603729 | 4.2:+8561692 | MS.gene57420:CDS |
| TGAGAATGGGATGTTTCAAA+TGG | 0.603878 | 4.2:+8565586 | MS.gene57420:CDS |
| GTAATTTCTACACCATCACT+TGG | 0.605477 | 4.2:-8563868 | None:intergenic |
| GTGGATGGCTTGCCAAGTGA+TGG | 0.606609 | 4.2:+8563856 | MS.gene57420:CDS |
| ACAAACTGAAGTGGTTCAGA+TGG | 0.608941 | 4.2:-8564650 | None:intergenic |
| CTCCGAACCACACACTCCAA+CGG | 0.614714 | 4.2:-8561502 | None:intergenic |
| TCGTCAATGGCAAACCCGGT+GGG | 0.620091 | 4.2:-8561327 | None:intergenic |
| GAACCACACACTCCAACGGA+AGG | 0.636707 | 4.2:-8561498 | None:intergenic |
| CACATGCATCTTGTTTACAG+CGG | 0.646015 | 4.2:+8562668 | MS.gene57420:CDS |
| TCAATGGCAAACCCGGTGGG+AGG | 0.656601 | 4.2:-8561324 | None:intergenic |
| TGTCATTGACGCCATAGACG+AGG | 0.663191 | 4.2:+8565986 | MS.gene57420:CDS |
| TACTGTTACACAGCACGTGG+CGG | 0.668638 | 4.2:+8562780 | MS.gene57420:CDS |
| GATATACTTGACTTCCACAC+AGG | 0.674786 | 4.2:+8562822 | MS.gene57420:CDS |
| GATGATGGTAATGAAGTGGA+TGG | 0.699911 | 4.2:+8563841 | MS.gene57420:intron |
| AGGTACTGTTACACAGCACG+TGG | 0.735751 | 4.2:+8562777 | MS.gene57420:intron |
| AATGAAGTCACATACCACCA+AGG | 0.747149 | 4.2:-8566024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAGAAAAAAAAAAAAAAAA+AGG | - | chr4.2:8562539-8562558 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAGGGAA+AGG | - | chr4.2:8562533-8562552 | None:intergenic | 15.0% |
| !! | AAAATGAAAAGTTAATCTTT+AGG | + | chr4.2:8563683-8563702 | MS.gene57420:intron | 15.0% |
| !! | AAAATTAAATAACACGATTT+AGG | - | chr4.2:8561982-8562001 | None:intergenic | 15.0% |
| !! | AATTAAAATCTATGTTTGTA+TGG | + | chr4.2:8562428-8562447 | MS.gene57420:intron | 15.0% |
| !! | AGATATTATGATAATTAACT+TGG | + | chr4.2:8565546-8565565 | MS.gene57420:intron | 15.0% |
| !! | ATGAAAATATGTTAATAAGT+CGG | + | chr4.2:8564953-8564972 | MS.gene57420:intron | 15.0% |
| !!! | ATTTTAAATAAGTTGTTAAC+AGG | + | chr4.2:8561459-8561478 | MS.gene57420:intron | 15.0% |
| !!! | GCTTCTAAATTTAAAATTAA+TGG | - | chr4.2:8564346-8564365 | None:intergenic | 15.0% |
| !!! | GGTAATTTTATTAACTTAAT+TGG | + | chr4.2:8563903-8563922 | MS.gene57420:intron | 15.0% |
| !!! | TCTTATAATCCAATTTTATA+AGG | + | chr4.2:8564987-8565006 | MS.gene57420:intron | 15.0% |
| !!! | TTATTTTAGTTTTTGTGATA+TGG | + | chr4.2:8562390-8562409 | MS.gene57420:intron | 15.0% |
| !!! | TTTATTATTATTGATGACTA+TGG | + | chr4.2:8561633-8561652 | MS.gene57420:intron | 15.0% |
| !!! | TTTTGTAGTTAATTAATGAT+TGG | - | chr4.2:8565636-8565655 | None:intergenic | 15.0% |
| !! | AAAATGTTCATACAAAAATG+GGG | + | chr4.2:8562125-8562144 | MS.gene57420:intron | 20.0% |
| !! | AGGAAGTTATTATCAATATA+TGG | + | chr4.2:8563703-8563722 | MS.gene57420:intron | 20.0% |
| !! | ATAACAAACAACGAAATATT+GGG | - | chr4.2:8562328-8562347 | None:intergenic | 20.0% |
| !! | ATAAGTTCATTTCAATGAAT+TGG | - | chr4.2:8564082-8564101 | None:intergenic | 20.0% |
| !! | ATACAAATACTTCATAGTTT+AGG | - | chr4.2:8562300-8562319 | None:intergenic | 20.0% |
| !! | ATCTTAAACAAGTCTATAAA+AGG | - | chr4.2:8565397-8565416 | None:intergenic | 20.0% |
| !! | ATGCTTTAATAAGAGTTTAA+TGG | + | chr4.2:8562022-8562041 | MS.gene57420:intron | 20.0% |
| !! | ATTCTTAATGTTATCTTGAA+TGG | + | chr4.2:8561802-8561821 | MS.gene57420:intron | 20.0% |
| !! | ATTTAACTAATATTCAGAAG+AGG | + | chr4.2:8564774-8564793 | MS.gene57420:intron | 20.0% |
| !! | CAAAATGTTCATACAAAAAT+GGG | + | chr4.2:8562124-8562143 | MS.gene57420:intron | 20.0% |
| !! | CATGGAATAAATAGTTAAAA+AGG | - | chr4.2:8566208-8566227 | None:intergenic | 20.0% |
| !! | CTTATTCTTGTGATATTATA+AGG | + | chr4.2:8563178-8563197 | MS.gene57420:intron | 20.0% |
| !! | GAAGTTGCTAAATTATAATA+CGG | - | chr4.2:8563332-8563351 | None:intergenic | 20.0% |
| !! | GTGAAGTGAAAAATAAAAAA+CGG | - | chr4.2:8564039-8564058 | None:intergenic | 20.0% |
| !! | TCAAAATGTTCATACAAAAA+TGG | + | chr4.2:8562123-8562142 | MS.gene57420:intron | 20.0% |
| !! | TGAAAATATGTTAATAAGTC+GGG | + | chr4.2:8564954-8564973 | MS.gene57420:intron | 20.0% |
| !! | TGAAGTGAAAAATAAAAAAC+GGG | - | chr4.2:8564038-8564057 | None:intergenic | 20.0% |
| !! | TTTAGTAAATTATGATACGA+TGG | + | chr4.2:8566050-8566069 | MS.gene57420:intron | 20.0% |
| !!! | AAATTGAGATTTAAAATGCA+GGG | - | chr4.2:8561735-8561754 | None:intergenic | 20.0% |
| !!! | AAATTTAAAATTAATGGACG+AGG | - | chr4.2:8564340-8564359 | None:intergenic | 20.0% |
| !!! | AATATTTCGTTGTTTGTTAT+GGG | + | chr4.2:8562328-8562347 | MS.gene57420:intron | 20.0% |
| !!! | AGAAATTACATATTTTGATC+TGG | + | chr4.2:8563882-8563901 | MS.gene57420:CDS | 20.0% |
| !!! | ATATGGAATTTTATTAATGC+AGG | + | chr4.2:8561656-8561675 | MS.gene57420:intron | 20.0% |
| !!! | ATTGAATTTGAAACTAAGAA+AGG | - | chr4.2:8565673-8565692 | None:intergenic | 20.0% |
| !!! | CTGTAGATCATAATTTTTAA+AGG | - | chr4.2:8562206-8562225 | None:intergenic | 20.0% |
| !!! | TAGATCTGAATTTTTACAAT+TGG | + | chr4.2:8565512-8565531 | MS.gene57420:intron | 20.0% |
| !!! | TTGTATGAACATTTTGAAAT+TGG | - | chr4.2:8562120-8562139 | None:intergenic | 20.0% |
| ! | AAAAAGAATGTCATTGTATG+TGG | - | chr4.2:8562486-8562505 | None:intergenic | 25.0% |
| ! | AAAAGGAAAACGTTTGATAT+TGG | + | chr4.2:8564750-8564769 | MS.gene57420:intron | 25.0% |
| ! | AAAGACTTGATAAAAACAGA+TGG | - | chr4.2:8564180-8564199 | None:intergenic | 25.0% |
| ! | AAGACTTGATAAAAACAGAT+GGG | - | chr4.2:8564179-8564198 | None:intergenic | 25.0% |
| ! | AAGCATTATTCAAAGAGATT+TGG | - | chr4.2:8562008-8562027 | None:intergenic | 25.0% |
| ! | AATAAAAATGAGTGATATGC+AGG | - | chr4.2:8562375-8562394 | None:intergenic | 25.0% |
| ! | AATCAAGCATGAAAAAACTT+GGG | - | chr4.2:8563609-8563628 | None:intergenic | 25.0% |
| ! | AATCAATCGCCTTATAAAAT+TGG | - | chr4.2:8564999-8565018 | None:intergenic | 25.0% |
| ! | ACAAGAATAATGTATAGATC+AGG | - | chr4.2:8564217-8564236 | None:intergenic | 25.0% |
| ! | ACTACTATAAACTAAAAGAG+AGG | - | chr4.2:8563102-8563121 | None:intergenic | 25.0% |
| ! | ACTTCATGATATAAACACTA+TGG | - | chr4.2:8564284-8564303 | None:intergenic | 25.0% |
| ! | ATAAAAATGAGTGATATGCA+GGG | - | chr4.2:8562374-8562393 | None:intergenic | 25.0% |
| ! | CAGTTGGAAAAATGAAAATT+AGG | - | chr4.2:8563632-8563651 | None:intergenic | 25.0% |
| ! | CATAACAAACAACGAAATAT+TGG | - | chr4.2:8562329-8562348 | None:intergenic | 25.0% |
| ! | CGAGTAACAATGAATATATA+TGG | - | chr4.2:8563548-8563567 | None:intergenic | 25.0% |
| ! | GAAAATATGTTAATAAGTCG+GGG | + | chr4.2:8564955-8564974 | MS.gene57420:intron | 25.0% |
| ! | GAATTTATGTTTACAACTAC+TGG | + | chr4.2:8563264-8563283 | MS.gene57420:intron | 25.0% |
| ! | GATATTATAAGGAGATGTTT+GGG | + | chr4.2:8563189-8563208 | MS.gene57420:intron | 25.0% |
| ! | TAAACAAGTCTATAAAAGGA+GGG | - | chr4.2:8565393-8565412 | None:intergenic | 25.0% |
| ! | TATAATTTCATGTGCAAGTT+AGG | + | chr4.2:8563449-8563468 | MS.gene57420:intron | 25.0% |
| ! | TATCTTCCTGCAAAAAAAAA+AGG | - | chr4.2:8564610-8564629 | None:intergenic | 25.0% |
| ! | TCTAATGTGAGTTTACTTTA+AGG | + | chr4.2:8561835-8561854 | MS.gene57420:intron | 25.0% |
| ! | TCTAATTATGCAACAATTCA+TGG | - | chr4.2:8563479-8563498 | None:intergenic | 25.0% |
| ! | TCTCAATAATTGATGAGAAA+AGG | - | chr4.2:8561944-8561963 | None:intergenic | 25.0% |
| ! | TCTCGTATGCATTTATAATA+TGG | + | chr4.2:8565835-8565854 | MS.gene57420:intron | 25.0% |
| ! | TGATATTATAAGGAGATGTT+TGG | + | chr4.2:8563188-8563207 | MS.gene57420:intron | 25.0% |
| ! | TTAAACAAGTCTATAAAAGG+AGG | - | chr4.2:8565394-8565413 | None:intergenic | 25.0% |
| ! | TTAAATAACACGATTTAGGT+TGG | - | chr4.2:8561978-8561997 | None:intergenic | 25.0% |
| ! | TTAGCAAATACAACTCTAAA+CGG | - | chr4.2:8563022-8563041 | None:intergenic | 25.0% |
| ! | TTATTATCAATATATGGCCA+GGG | + | chr4.2:8563709-8563728 | MS.gene57420:intron | 25.0% |
| ! | TTGACACGTAAGTAATTAAA+AGG | + | chr4.2:8561572-8561591 | MS.gene57420:intron | 25.0% |
| ! | TTTATACGAACACAGAATTT+GGG | - | chr4.2:8565031-8565050 | None:intergenic | 25.0% |
| !! | AGAAAGTACAATCAATACTA+CGG | - | chr4.2:8564256-8564275 | None:intergenic | 25.0% |
| !! | ATTAAAAGGTTTTACAACGT+CGG | + | chr4.2:8561586-8561605 | MS.gene57420:intron | 25.0% |
| !! | ATTATTGATGACTATGGATA+TGG | + | chr4.2:8561639-8561658 | MS.gene57420:intron | 25.0% |
| !! | CAAATTGAGATTTAAAATGC+AGG | - | chr4.2:8561736-8561755 | None:intergenic | 25.0% |
| !! | CAATATTTCGTTGTTTGTTA+TGG | + | chr4.2:8562327-8562346 | MS.gene57420:intron | 25.0% |
| !! | CTAAAAACTTGTCAAGTTTT+TGG | + | chr4.2:8563038-8563057 | MS.gene57420:intron | 25.0% |
| !! | GAAATATGTATTTTCGCATA+AGG | - | chr4.2:8562511-8562530 | None:intergenic | 25.0% |
| !! | TATTTTTCACTTCACTAGTA+TGG | + | chr4.2:8564044-8564063 | MS.gene57420:intron | 25.0% |
| !! | TTTATAGTAGTGTTTTTCGT+GGG | + | chr4.2:8563111-8563130 | MS.gene57420:intron | 25.0% |
| !! | TTTGAAACTAAGAAAGGAAT+TGG | - | chr4.2:8565667-8565686 | None:intergenic | 25.0% |
| !! | TTTTATACGAACACAGAATT+TGG | - | chr4.2:8565032-8565051 | None:intergenic | 25.0% |
| !!! | AACGTTTTCCTTTTAATTTC+TGG | - | chr4.2:8564744-8564763 | None:intergenic | 25.0% |
| !!! | AATAGTCCTTTTTTTTTTGC+AGG | + | chr4.2:8564601-8564620 | MS.gene57420:intron | 25.0% |
| !!! | ACTTTTTCTTTCTAAATCGA+GGG | + | chr4.2:8564395-8564414 | MS.gene57420:intron | 25.0% |
| !!! | GAAAATTGATGGATTTTCAT+TGG | + | chr4.2:8562154-8562173 | MS.gene57420:intron | 25.0% |
| !!! | TATGAACATTTTGAAATTGG+TGG | - | chr4.2:8562117-8562136 | None:intergenic | 25.0% |
| !!! | TCTGTTTTTATCAAGTCTTT+TGG | + | chr4.2:8564180-8564199 | MS.gene57420:intron | 25.0% |
| !!! | TCTTATTTTCTATTTCTGCA+AGG | - | chr4.2:8564868-8564887 | None:intergenic | 25.0% |
| !!! | TTGATTTTTTTTCTCAATCG+AGG | + | chr4.2:8563947-8563966 | MS.gene57420:intron | 25.0% |
| !!! | TTTTATAAGGCGATTGATTT+AGG | + | chr4.2:8565000-8565019 | MS.gene57420:intron | 25.0% |
| AAAATATCTCTGTCCATATC+AGG | + | chr4.2:8562757-8562776 | MS.gene57420:intron | 30.0% | |
| AAACAAGTCTATAAAAGGAG+GGG | - | chr4.2:8565392-8565411 | None:intergenic | 30.0% | |
| ACATTAGTACTTCAGAGAAT+GGG | - | chr4.2:8562866-8562885 | None:intergenic | 30.0% | |
| AGTAAAAGGGGAGAAAAAAT+AGG | - | chr4.2:8565720-8565739 | None:intergenic | 30.0% | |
| ATATTAAGGCAACCAAAATC+TGG | - | chr4.2:8565782-8565801 | None:intergenic | 30.0% | |
| ATCAAGCATGAAAAAACTTG+GGG | - | chr4.2:8563608-8563627 | None:intergenic | 30.0% | |
| ATCTCAGAAAAAGGAGTAAA+AGG | - | chr4.2:8565734-8565753 | None:intergenic | 30.0% | |
| ATTCATTCTCCTTAGTAAGA+AGG | - | chr4.2:8563147-8563166 | None:intergenic | 30.0% | |
| CAACTACTGGACTTAAAATT+TGG | + | chr4.2:8563277-8563296 | MS.gene57420:intron | 30.0% | |
| CTTAACATTATTCCCATAGT+GGG | - | chr4.2:8564909-8564928 | None:intergenic | 30.0% | |
| GAATCAAGCATGAAAAAACT+TGG | - | chr4.2:8563610-8563629 | None:intergenic | 30.0% | |
| GATAGTTGTAAAGTGACTAT+TGG | - | chr4.2:8564451-8564470 | None:intergenic | 30.0% | |
| GTAAAACTATTTCACAGTGA+CGG | - | chr4.2:8562055-8562074 | None:intergenic | 30.0% | |
| GTTATTATCAATATATGGCC+AGG | + | chr4.2:8563708-8563727 | MS.gene57420:intron | 30.0% | |
| GTTGCATCTAATCTTCATTT+AGG | + | chr4.2:8561772-8561791 | MS.gene57420:intron | 30.0% | |
| TAAAAAAATACTTGCCTGTG+TGG | - | chr4.2:8562839-8562858 | None:intergenic | 30.0% | |
| TAAGTGTTTCCAAGTTAGTA+AGG | + | chr4.2:8563978-8563997 | MS.gene57420:intron | 30.0% | |
| TAGAGTGTAAACAAAGCAAA+GGG | + | chr4.2:8562902-8562921 | MS.gene57420:intron | 30.0% | |
| TATCACAAGAATAAGTGACT+TGG | - | chr4.2:8563173-8563192 | None:intergenic | 30.0% | |
| TCGTCAAACTTAATGTAACA+TGG | - | chr4.2:8566226-8566245 | None:intergenic | 30.0% | |
| TCTCAGAAAAAGGAGTAAAA+GGG | - | chr4.2:8565733-8565752 | None:intergenic | 30.0% | |
| TCTTAACATTATTCCCATAG+TGG | - | chr4.2:8564910-8564929 | None:intergenic | 30.0% | |
| TTAATTACTTACGTGTCAAC+CGG | - | chr4.2:8561571-8561590 | None:intergenic | 30.0% | |
| TTAGAGTGTAAACAAAGCAA+AGG | + | chr4.2:8562901-8562920 | MS.gene57420:intron | 30.0% | |
| TTCATTCTCCTTAGTAAGAA+GGG | - | chr4.2:8563146-8563165 | None:intergenic | 30.0% | |
| TTCTGCTTACTTCAACAAAT+CGG | + | chr4.2:8561361-8561380 | MS.gene57420:CDS | 30.0% | |
| ! | GCTTTGTATAGATGCATTTT+TGG | + | chr4.2:8564306-8564325 | MS.gene57420:intron | 30.0% |
| ! | GTTTATAGTAGTGTTTTTCG+TGG | + | chr4.2:8563110-8563129 | MS.gene57420:intron | 30.0% |
| ! | TAAATTTAGAAGCGTGACAA+AGG | + | chr4.2:8564353-8564372 | MS.gene57420:intron | 30.0% |
| ! | TAATACCATTTTGCAGATGA+TGG | + | chr4.2:8563826-8563845 | MS.gene57420:intron | 30.0% |
| ! | TTGGTTGCCTTAATATTTTC+CGG | + | chr4.2:8565786-8565805 | MS.gene57420:intron | 30.0% |
| !! | GACTTTTTCTTTCTAAATCG+AGG | + | chr4.2:8564394-8564413 | MS.gene57420:intron | 30.0% |
| !! | TAGGTTTTGTAGTGGAATTT+GGG | - | chr4.2:8565251-8565270 | None:intergenic | 30.0% |
| AAAGAAGCTCATTTGTCGAT+GGG | + | chr4.2:8561863-8561882 | MS.gene57420:intron | 35.0% | |
| AACAAGATGCATGTGTATCT+TGG | - | chr4.2:8562663-8562682 | None:intergenic | 35.0% | |
| AACAAGTCTATAAAAGGAGG+GGG | - | chr4.2:8565391-8565410 | None:intergenic | 35.0% | |
| AAGCCTATCCAAGATTCATA+AGG | + | chr4.2:8565050-8565069 | MS.gene57420:intron | 35.0% | |
| AATTTCATGTGCAAGTTAGG+TGG | + | chr4.2:8563452-8563471 | MS.gene57420:intron | 35.0% | |
| ACAGAAGGAAGACATGAATT+TGG | - | chr4.2:8562581-8562600 | None:intergenic | 35.0% | |
| ACTACTAGTATTCACAGAGT+AGG | - | chr4.2:8565476-8565495 | None:intergenic | 35.0% | |
| AGATTGAAAGTAACCATTGC+AGG | + | chr4.2:8564712-8564731 | MS.gene57420:intron | 35.0% | |
| AGCAAAGGGTTTATTCAGTT+TGG | + | chr4.2:8562916-8562935 | MS.gene57420:intron | 35.0% | |
| ATGAAATGATACTCCCACTA+TGG | + | chr4.2:8564893-8564912 | MS.gene57420:intron | 35.0% | |
| ATTTAGACCCCTTCTTACTA+AGG | + | chr4.2:8563135-8563154 | MS.gene57420:intron | 35.0% | |
| CAACTACTGGACTTAAAGTT+TGG | + | chr4.2:8563400-8563419 | MS.gene57420:intron | 35.0% | |
| CAGAAGGAAGACATGAATTT+GGG | - | chr4.2:8562580-8562599 | None:intergenic | 35.0% | |
| CAGAGAATGGTGAATAAAGA+CGG | - | chr4.2:8565317-8565336 | None:intergenic | 35.0% | |
| CATTACCATCATCTGCAAAA+TGG | - | chr4.2:8563834-8563853 | None:intergenic | 35.0% | |
| CTACTAGTATTCACAGAGTA+GGG | - | chr4.2:8565475-8565494 | None:intergenic | 35.0% | |
| CTCAGAAAAAGGAGTAAAAG+GGG | - | chr4.2:8565732-8565751 | None:intergenic | 35.0% | |
| GAATCGTACTACACTTTAAC+AGG | - | chr4.2:8562964-8562983 | None:intergenic | 35.0% | |
| GACATTAGTACTTCAGAGAA+TGG | - | chr4.2:8562867-8562886 | None:intergenic | 35.0% | |
| GCTTGTGATTTAATCTGCTA+AGG | + | chr4.2:8565927-8565946 | MS.gene57420:intron | 35.0% | |
| GGAAAAGGGAAAGAAATAGA+GGG | - | chr4.2:8565369-8565388 | None:intergenic | 35.0% | |
| GGAATTGAAAACATACTTCC+AGG | - | chr4.2:8565191-8565210 | None:intergenic | 35.0% | |
| GGATCACACCAGAAATTAAA+AGG | + | chr4.2:8564733-8564752 | MS.gene57420:intron | 35.0% | |
| GTAATTTCTACACCATCACT+TGG | - | chr4.2:8563871-8563890 | None:intergenic | 35.0% | |
| GTCTCACATTGAATATGATC+TGG | + | chr4.2:8565165-8565184 | MS.gene57420:intron | 35.0% | |
| TAAAGAAGCTCATTTGTCGA+TGG | + | chr4.2:8561862-8561881 | MS.gene57420:intron | 35.0% | |
| TAATTACTTACGTGTCAACC+GGG | - | chr4.2:8561570-8561589 | None:intergenic | 35.0% | |
| TACAAACTTGGGTAGAACTT+TGG | + | chr4.2:8564552-8564571 | MS.gene57420:intron | 35.0% | |
| TAGGAAACACAACACAAACA+TGG | - | chr4.2:8566257-8566276 | None:intergenic | 35.0% | |
| TCATTCTCCTTAGTAAGAAG+GGG | - | chr4.2:8563145-8563164 | None:intergenic | 35.0% | |
| TCGACAAATGAGCTTCTTTA+CGG | - | chr4.2:8561862-8561881 | None:intergenic | 35.0% | |
| TGAAATGATACTCCCACTAT+GGG | + | chr4.2:8564894-8564913 | MS.gene57420:intron | 35.0% | |
| TGACCTTATGAATCTTGGAT+AGG | - | chr4.2:8565056-8565075 | None:intergenic | 35.0% | |
| TGAGAATGGGATGTTTCAAA+TGG | + | chr4.2:8565586-8565605 | MS.gene57420:CDS | 35.0% | |
| TGCACTTATTGAAGCAATGA+TGG | + | chr4.2:8566291-8566310 | MS.gene57420:CDS | 35.0% | |
| TGCATACGAGAAACAAAAGT+TGG | - | chr4.2:8565826-8565845 | None:intergenic | 35.0% | |
| TTCACAACAACAAACTGAAG+TGG | - | chr4.2:8564662-8564681 | None:intergenic | 35.0% | |
| TTGTGATATGGACAGATAAC+AGG | + | chr4.2:8562402-8562421 | MS.gene57420:intron | 35.0% | |
| TTTCTTTCTAAATCGAGGGA+GGG | + | chr4.2:8564399-8564418 | MS.gene57420:intron | 35.0% | |
| ! | AAATGGCTGATGATGTAAGT+AGG | + | chr4.2:8565603-8565622 | MS.gene57420:intron | 35.0% |
| ! | AATTTCACCGTTTTCGTCAA+TGG | - | chr4.2:8561343-8561362 | None:intergenic | 35.0% |
| ! | ACAAAAGGTTGTCCAGATTT+TGG | + | chr4.2:8565767-8565786 | MS.gene57420:intron | 35.0% |
| ! | AGTGTGTTATTGTTCTTCCT+TGG | + | chr4.2:8564121-8564140 | MS.gene57420:intron | 35.0% |
| ! | AGTTTGCTTCCTTACTAACT+TGG | - | chr4.2:8563990-8564009 | None:intergenic | 35.0% |
| ! | TGACTTTTGCAACACACTTA+TGG | - | chr4.2:8566122-8566141 | None:intergenic | 35.0% |
| ! | TTGAAATTGGTGGTATGACA+TGG | - | chr4.2:8562107-8562126 | None:intergenic | 35.0% |
| ! | TTTTCTTTCTAAATCGAGGG+AGG | + | chr4.2:8564398-8564417 | MS.gene57420:intron | 35.0% |
| !! | ACTTCAGTTTGTTGTTGTGA+AGG | + | chr4.2:8564661-8564680 | MS.gene57420:CDS | 35.0% |
| !! | AGTTTGACCTTGTCACTTTA+AGG | - | chr4.2:8564497-8564516 | None:intergenic | 35.0% |
| !! | GATGGATTTTCATTGGATGT+CGG | + | chr4.2:8562161-8562180 | MS.gene57420:intron | 35.0% |
| !! | GTAGGTTTTGTAGTGGAATT+TGG | - | chr4.2:8565252-8565271 | None:intergenic | 35.0% |
| !! | GTTTGACCTTGTCACTTTAA+GGG | - | chr4.2:8564496-8564515 | None:intergenic | 35.0% |
| !! | TTTCGTTGTTTGTTATGGGA+TGG | + | chr4.2:8562332-8562351 | MS.gene57420:intron | 35.0% |
| AAACAAAAGCAACACTGGTG+CGG | - | chr4.2:8564156-8564175 | None:intergenic | 40.0% | |
| AAATTCAGTCTCCTCGTCTA+TGG | - | chr4.2:8566000-8566019 | None:intergenic | 40.0% | |
| AAGAGGTTCTTCTCTCTTCT+AGG | + | chr4.2:8564791-8564810 | MS.gene57420:intron | 40.0% | |
| AATGAAGTCACATACCACCA+AGG | - | chr4.2:8566027-8566046 | None:intergenic | 40.0% | |
| ACAAACTGAAGTGGTTCAGA+TGG | - | chr4.2:8564653-8564672 | None:intergenic | 40.0% | |
| ACAAGTCTATAAAAGGAGGG+GGG | - | chr4.2:8565390-8565409 | None:intergenic | 40.0% | |
| ACATTGAATATGATCTGGCC+TGG | + | chr4.2:8565170-8565189 | MS.gene57420:intron | 40.0% | |
| ACGATAGCAGTAACTGATAG+AGG | - | chr4.2:8565079-8565098 | None:intergenic | 40.0% | |
| ACTCATTCATCACAGTCACA+GGG | + | chr4.2:8562259-8562278 | MS.gene57420:intron | 40.0% | |
| AGAGGTGACCTTATGAATCT+TGG | - | chr4.2:8565061-8565080 | None:intergenic | 40.0% | |
| ATAATGCCACTGTTCTCCAA+TGG | - | chr4.2:8565431-8565450 | None:intergenic | 40.0% | |
| ATATATAGGAGAATTGGCGC+AGG | - | chr4.2:8565286-8565305 | None:intergenic | 40.0% | |
| ATGGGAAACAAAAGCAACAC+TGG | - | chr4.2:8564161-8564180 | None:intergenic | 40.0% | |
| CTAAGGCAACATTTGTGAAC+AGG | + | chr4.2:8565944-8565963 | MS.gene57420:intron | 40.0% | |
| CTGTGTAACAGTACCTGATA+TGG | - | chr4.2:8562773-8562792 | None:intergenic | 40.0% | |
| CTTTCAGAAGCTTGTACAAG+TGG | - | chr4.2:8564694-8564713 | None:intergenic | 40.0% | |
| GAACCAAGCAATACTCACTA+TGG | - | chr4.2:8561394-8561413 | None:intergenic | 40.0% | |
| GACTGAATTTAATGCCTTGG+TGG | + | chr4.2:8566010-8566029 | MS.gene57420:CDS | 40.0% | |
| GATATACTTGACTTCCACAC+AGG | + | chr4.2:8562822-8562841 | MS.gene57420:CDS | 40.0% | |
| GGAGACTGAATTTAATGCCT+TGG | + | chr4.2:8566007-8566026 | MS.gene57420:CDS | 40.0% | |
| GGGAAAAGGGAAAGAAATAG+AGG | - | chr4.2:8565370-8565389 | None:intergenic | 40.0% | |
| GTGCTCTTCAATATTTGCAC+AGG | - | chr4.2:8561682-8561701 | None:intergenic | 40.0% | |
| GTTCTACCCAAGTTTGTATC+AGG | - | chr4.2:8564550-8564569 | None:intergenic | 40.0% | |
| GTTTGTGTTGTGTTTCCTAC+AGG | + | chr4.2:8566258-8566277 | MS.gene57420:intron | 40.0% | |
| TACGAACACAGAATTTGGGT+TGG | - | chr4.2:8565027-8565046 | None:intergenic | 40.0% | |
| TACTCATTCATCACAGTCAC+AGG | + | chr4.2:8562258-8562277 | MS.gene57420:intron | 40.0% | |
| TATAAAAGGAGGGGGGAAAA+GGG | - | chr4.2:8565383-8565402 | None:intergenic | 40.0% | |
| TATTTGTGCAGGGTGAGAAT+GGG | + | chr4.2:8565573-8565592 | MS.gene57420:intron | 40.0% | |
| TCACAATCAGACATGACAGT+TGG | - | chr4.2:8563648-8563667 | None:intergenic | 40.0% | |
| TCCAACGGAAGGTTATTCAT+AGG | - | chr4.2:8561490-8561509 | None:intergenic | 40.0% | |
| TCCTATGAATAACCTTCCGT+TGG | + | chr4.2:8561486-8561505 | MS.gene57420:CDS | 40.0% | |
| TGAGAGTCGTTCTCATTTCT+AGG | - | chr4.2:8565212-8565231 | None:intergenic | 40.0% | |
| TTATTTGTGCAGGGTGAGAA+TGG | + | chr4.2:8565572-8565591 | MS.gene57420:intron | 40.0% | |
| TTCTCACCCTGCACAAATAA+AGG | - | chr4.2:8565572-8565591 | None:intergenic | 40.0% | |
| TTCTTTCTAAATCGAGGGAG+GGG | + | chr4.2:8564400-8564419 | MS.gene57420:intron | 40.0% | |
| ! | AACTTGGCCTTTATTTGTGC+AGG | + | chr4.2:8565562-8565581 | MS.gene57420:intron | 40.0% |
| ! | ACATGCATCTTGTTTACAGC+GGG | + | chr4.2:8562669-8562688 | MS.gene57420:CDS | 40.0% |
| ! | ACGAACACAGAATTTGGGTT+GGG | - | chr4.2:8565026-8565045 | None:intergenic | 40.0% |
| ! | ACTTGGCCTTTATTTGTGCA+GGG | + | chr4.2:8565563-8565582 | MS.gene57420:intron | 40.0% |
| ! | ATAAGGAGATGTTTGGGACT+TGG | + | chr4.2:8563195-8563214 | MS.gene57420:intron | 40.0% |
| ! | ATATTGAAGAGCACACCTGA+TGG | + | chr4.2:8561688-8561707 | MS.gene57420:CDS | 40.0% |
| ! | CACATGCATCTTGTTTACAG+CGG | + | chr4.2:8562668-8562687 | MS.gene57420:CDS | 40.0% |
| ! | GATGATGGTAATGAAGTGGA+TGG | + | chr4.2:8563841-8563860 | MS.gene57420:intron | 40.0% |
| ! | TAAGGAGATGTTTGGGACTT+GGG | + | chr4.2:8563196-8563215 | MS.gene57420:intron | 40.0% |
| ! | TCACCATAGTGAGTATTGCT+TGG | + | chr4.2:8561388-8561407 | MS.gene57420:intron | 40.0% |
| ! | TCGCTGATCTAAAACACAGA+AGG | - | chr4.2:8562596-8562615 | None:intergenic | 40.0% |
| ! | TCTGGACAACCTTTTGTAAG+TGG | - | chr4.2:8565764-8565783 | None:intergenic | 40.0% |
| ! | TGCAGATGATGGTAATGAAG+TGG | + | chr4.2:8563837-8563856 | MS.gene57420:intron | 40.0% |
| !! | AAAAGGCGCTAAACAACAGT+TGG | - | chr4.2:8561927-8561946 | None:intergenic | 40.0% |
| !! | ATCAGAGTGCCACTTACAAA+AGG | + | chr4.2:8565752-8565771 | MS.gene57420:intron | 40.0% |
| !! | TCAAGTCTTTTGGAAGATCG+TGG | + | chr4.2:8564190-8564209 | MS.gene57420:intron | 40.0% |
| !! | TGAATGTATGTTGCTTTGCC+CGG | + | chr4.2:8561549-8561568 | MS.gene57420:CDS | 40.0% |
| !! | TTCTGTGTTTTAGATCAGCG+AGG | + | chr4.2:8562595-8562614 | MS.gene57420:intron | 40.0% |
| !!! | AAGGTTGGTAGGTTTTGTAG+TGG | - | chr4.2:8565259-8565278 | None:intergenic | 40.0% |
| AAGATGCCTGTCATTGCCAT+TGG | + | chr4.2:8565412-8565431 | MS.gene57420:intron | 45.0% | |
| AAGGACTTCAAATCTCGTCG+GGG | - | chr4.2:8564473-8564492 | None:intergenic | 45.0% | |
| AATGTTCAGTCCTGGACATG+AGG | + | chr4.2:8565119-8565138 | MS.gene57420:intron | 45.0% | |
| ACCTTCCAAATGTTCAGTCC+TGG | + | chr4.2:8565111-8565130 | MS.gene57420:intron | 45.0% | |
| AGACGGCCTGATACAAACTT+GGG | + | chr4.2:8564541-8564560 | MS.gene57420:intron | 45.0% | |
| ATGTTCAGTCCTGGACATGA+GGG | + | chr4.2:8565120-8565139 | MS.gene57420:intron | 45.0% | |
| CATGTCCAGGACTGAACATT+TGG | - | chr4.2:8565119-8565138 | None:intergenic | 45.0% | |
| CATTTGGAAGGTGACTTGAG+TGG | - | chr4.2:8565103-8565122 | None:intergenic | 45.0% | |
| CATTTGTGAACAGGACTTGC+TGG | + | chr4.2:8565953-8565972 | MS.gene57420:intron | 45.0% | |
| CTATAAAAGGAGGGGGGAAA+AGG | - | chr4.2:8565384-8565403 | None:intergenic | 45.0% | |
| GAAAGAAATAGAGGGAGTCG+GGG | - | chr4.2:8565361-8565380 | None:intergenic | 45.0% | |
| GAAGGACTTCAAATCTCGTC+GGG | - | chr4.2:8564474-8564493 | None:intergenic | 45.0% | |
| GAATGCGTTTATCATCACCC+TGG | - | chr4.2:8563729-8563748 | None:intergenic | 45.0% | |
| GCCACAGCCGGAAAATATTA+AGG | - | chr4.2:8565796-8565815 | None:intergenic | 45.0% | |
| GGAAAGAAATAGAGGGAGTC+GGG | - | chr4.2:8565362-8565381 | None:intergenic | 45.0% | |
| GGAAGGACTTCAAATCTCGT+CGG | - | chr4.2:8564475-8564494 | None:intergenic | 45.0% | |
| GGCACTCTGATCTCAGAAAA+AGG | - | chr4.2:8565743-8565762 | None:intergenic | 45.0% | |
| GGGAAAGAAATAGAGGGAGT+CGG | - | chr4.2:8565363-8565382 | None:intergenic | 45.0% | |
| GGGTTTGCCATTGACGAAAA+CGG | + | chr4.2:8561333-8561352 | MS.gene57420:CDS | 45.0% | |
| GTCCTTCCCTTAAAGTGACA+AGG | + | chr4.2:8564487-8564506 | MS.gene57420:intron | 45.0% | |
| TCATTGCCATTGGAGAACAG+TGG | + | chr4.2:8565422-8565441 | MS.gene57420:intron | 45.0% | |
| TCCAGGACTGAACATTTGGA+AGG | - | chr4.2:8565115-8565134 | None:intergenic | 45.0% | |
| TCTTTCTAAATCGAGGGAGG+GGG | + | chr4.2:8564401-8564420 | MS.gene57420:intron | 45.0% | |
| TGGGGTGATGCGAAAATTGA+TGG | + | chr4.2:8562143-8562162 | MS.gene57420:intron | 45.0% | |
| TGTTCTCCAATGGCAATGAC+AGG | - | chr4.2:8565421-8565440 | None:intergenic | 45.0% | |
| ! | GCCTTAATATTTTCCGGCTG+TGG | + | chr4.2:8565792-8565811 | MS.gene57420:intron | 45.0% |
| ! | GTTTTCGTCAATGGCAAACC+CGG | - | chr4.2:8561334-8561353 | None:intergenic | 45.0% |
| ! | TGTAGTGGAATTTGGGACTG+CGG | - | chr4.2:8565244-8565263 | None:intergenic | 45.0% |
| ! | TTTCTGGTGTGATCCTGCAA+TGG | - | chr4.2:8564728-8564747 | None:intergenic | 45.0% |
| !! | GACCTTGTCACTTTAAGGGA+AGG | - | chr4.2:8564492-8564511 | None:intergenic | 45.0% |
| !! | TGTGTTTTAGATCAGCGAGG+AGG | + | chr4.2:8562598-8562617 | MS.gene57420:intron | 45.0% |
| !! | TAGAAAAAAAAAAAAAAAAA+GGG | - | chr4.2:8562538-8562557 | None:intergenic | 5.0% |
| AAAAGTCTGCATCAAGCCCG+AGG | - | chr4.2:8564381-8564400 | None:intergenic | 50.0% | |
| AAGCGTGACAAAGGAACCTC+GGG | + | chr4.2:8564362-8564381 | MS.gene57420:intron | 50.0% | |
| ACACAATCTCCCTCATGTCC+AGG | - | chr4.2:8565132-8565151 | None:intergenic | 50.0% | |
| CAGACGGCCTGATACAAACT+TGG | + | chr4.2:8564540-8564559 | MS.gene57420:intron | 50.0% | |
| CTTACAGCTGACCATCCATC+AGG | - | chr4.2:8561706-8561725 | None:intergenic | 50.0% | |
| GAAGCGTGACAAAGGAACCT+CGG | + | chr4.2:8564361-8564380 | MS.gene57420:intron | 50.0% | |
| GTGCAGCTTCTTCTTCCTGT+AGG | - | chr4.2:8566276-8566295 | None:intergenic | 50.0% | |
| TAACCTTCCGTTGGAGTGTG+TGG | + | chr4.2:8561495-8561514 | MS.gene57420:CDS | 50.0% | |
| TACTGTTACACAGCACGTGG+CGG | + | chr4.2:8562780-8562799 | MS.gene57420:CDS | 50.0% | |
| TATAGGAGAATTGGCGCAGG+AGG | - | chr4.2:8565283-8565302 | None:intergenic | 50.0% | |
| TCTATGGCGTCAATGACAGC+AGG | - | chr4.2:8565984-8566003 | None:intergenic | 50.0% | |
| TGGTGCGGTAATACAGACCA+AGG | - | chr4.2:8564141-8564160 | None:intergenic | 50.0% | |
| TGTCATTGACGCCATAGACG+AGG | + | chr4.2:8565986-8566005 | MS.gene57420:CDS | 50.0% | |
| TTCCGTTGGAGTGTGTGGTT+CGG | + | chr4.2:8561500-8561519 | MS.gene57420:CDS | 50.0% | |
| ! | AGGTACTGTTACACAGCACG+TGG | + | chr4.2:8562777-8562796 | MS.gene57420:intron | 50.0% |
| ! | TGAAGAGCACACCTGATGGA+TGG | + | chr4.2:8561692-8561711 | MS.gene57420:CDS | 50.0% |
| ATTGGCGCAGGAGGAAAGGT+TGG | - | chr4.2:8565274-8565293 | None:intergenic | 55.0% | |
| CTCCGAACCACACACTCCAA+CGG | - | chr4.2:8561505-8561524 | None:intergenic | 55.0% | |
| GAACCACACACTCCAACGGA+AGG | - | chr4.2:8561501-8561520 | None:intergenic | 55.0% | |
| GAGAATTGGCGCAGGAGGAA+AGG | - | chr4.2:8565278-8565297 | None:intergenic | 55.0% | |
| GGACAGATGGGAGCAGAGAA+TGG | - | chr4.2:8565330-8565349 | None:intergenic | 55.0% | |
| GGGGTGCAATGAGGACAGAT+GGG | - | chr4.2:8565342-8565361 | None:intergenic | 55.0% | |
| TCGTCAATGGCAAACCCGGT+GGG | - | chr4.2:8561330-8561349 | None:intergenic | 55.0% | |
| TTCGTCAATGGCAAACCCGG+TGG | - | chr4.2:8561331-8561350 | None:intergenic | 55.0% | |
| TTTGTATCAGGCCGTCTGCG+AGG | - | chr4.2:8564538-8564557 | None:intergenic | 55.0% | |
| ! | CTGAGTTGACACCTCGCAGA+CGG | + | chr4.2:8564524-8564543 | MS.gene57420:intron | 55.0% |
| ! | GTGGATGGCTTGCCAAGTGA+TGG | + | chr4.2:8563856-8563875 | MS.gene57420:CDS | 55.0% |
| ! | TCTGCGAGGTGTCAACTCAG+TGG | - | chr4.2:8564524-8564543 | None:intergenic | 55.0% |
| CGGGGTGCAATGAGGACAGA+TGG | - | chr4.2:8565343-8565362 | None:intergenic | 60.0% | |
| GTTGGAACGCATGCCACAGC+CGG | - | chr4.2:8565808-8565827 | None:intergenic | 60.0% | |
| TCAATGGCAAACCCGGTGGG+AGG | - | chr4.2:8561327-8561346 | None:intergenic | 60.0% | |
| ! | GCGCAGGAGGAAAGGTTGGT+AGG | - | chr4.2:8565270-8565289 | None:intergenic | 60.0% |
| GAGGGAGTCGGGGTGCAATG+AGG | - | chr4.2:8565351-8565370 | None:intergenic | 65.0% | |
| GCAAACCCGGTGGGAGGTTC+CGG | - | chr4.2:8561321-8561340 | None:intergenic | 65.0% | |
| CCGGTGGGAGGTTCCGGCAA+CGG | - | chr4.2:8561315-8561334 | None:intergenic | 70.0% | |
| CCGTTGCCGGAACCTCCCAC+CGG | + | chr4.2:8561312-8561331 | MS.gene57420:CDS | 70.0% | |
| CGTTGCCGGAACCTCCCACC+GGG | + | chr4.2:8561313-8561332 | MS.gene57420:CDS | 70.0% | |
| GCGAGCGCATACGCTGCAGC+AGG | - | chr4.2:8562641-8562660 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 8561309 | 8566336 | 8561309 | ID=MS.gene57420 |
| chr4.2 | mRNA | 8561309 | 8566336 | 8561309 | ID=MS.gene57420.t1;Parent=MS.gene57420 |
| chr4.2 | exon | 8561309 | 8561395 | 8561309 | ID=MS.gene57420.t1.exon1;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8561309 | 8561395 | 8561309 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8561481 | 8561578 | 8561481 | ID=MS.gene57420.t1.exon2;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8561481 | 8561578 | 8561481 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8561678 | 8561720 | 8561678 | ID=MS.gene57420.t1.exon3;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8561678 | 8561720 | 8561678 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8562608 | 8562690 | 8562608 | ID=MS.gene57420.t1.exon4;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8562608 | 8562690 | 8562608 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8562779 | 8562843 | 8562779 | ID=MS.gene57420.t1.exon5;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8562779 | 8562843 | 8562779 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8563842 | 8563903 | 8563842 | ID=MS.gene57420.t1.exon6;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8563842 | 8563903 | 8563842 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8564623 | 8564682 | 8564623 | ID=MS.gene57420.t1.exon7;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8564623 | 8564682 | 8564623 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8565584 | 8565616 | 8565584 | ID=MS.gene57420.t1.exon8;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8565584 | 8565616 | 8565584 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8565966 | 8566031 | 8565966 | ID=MS.gene57420.t1.exon9;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8565966 | 8566031 | 8565966 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| chr4.2 | exon | 8566280 | 8566336 | 8566280 | ID=MS.gene57420.t1.exon10;Parent=MS.gene57420.t1 |
| chr4.2 | CDS | 8566280 | 8566336 | 8566280 | ID=cds.MS.gene57420.t1;Parent=MS.gene57420.t1 |
| Gene Sequence |
| Protein sequence |
