AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059960.t1 MTR_4g104470 92.440 291 20 2 1 290 11 300 0.0 501
MS.gene059960.t1 MTR_3g075500 59.386 293 95 5 1 288 15 288 3.05e-106 311
MS.gene059960.t1 MTR_3g075500 58.182 275 91 5 1 270 15 270 2.31e-95 282
MS.gene059960.t1 MTR_3g075500 45.349 86 44 1 207 289 110 195 3.51e-17 79.7
MS.gene059960.t1 MTR_1g064230 43.854 301 124 7 7 290 8 280 7.28e-62 197
MS.gene059960.t1 MTR_1g045510 44.828 174 92 2 112 285 114 283 1.17e-47 160
MS.gene059960.t1 MTR_7g106440 40.110 182 101 3 112 285 110 291 1.17e-40 144
MS.gene059960.t1 MTR_7g106440 46.429 84 45 0 112 195 213 296 8.45e-17 79.3
MS.gene059960.t1 MTR_1g056520 38.122 181 108 3 106 282 103 283 2.64e-36 132
MS.gene059960.t1 MTR_3g027140 39.429 175 102 1 112 282 61 235 2.58e-33 122
MS.gene059960.t1 MTR_3g027140 46.154 78 42 0 207 284 61 138 1.88e-17 80.1
MS.gene059960.t1 MTR_4g104450 53.398 103 46 2 154 254 2 104 1.77e-28 105
MS.gene059960.t1 MTR_4g070080 57.143 77 33 0 207 283 7 83 2.73e-26 100
MS.gene059960.t1 MTR_4g070080 42.105 76 44 0 112 187 7 82 1.25e-13 67.0
MS.gene059960.t1 MTR_4g070080 57.143 77 33 0 207 283 7 83 7.70e-26 100
MS.gene059960.t1 MTR_4g070080 42.105 76 44 0 112 187 7 82 3.07e-13 66.6
MS.gene059960.t1 MTR_3g099590 32.461 191 114 7 97 279 73 256 8.39e-23 95.5
MS.gene059960.t1 MTR_4g070190 50.649 77 38 0 207 283 9 85 2.72e-22 91.3
MS.gene059960.t1 MTR_4g070190 41.026 78 46 0 110 187 7 84 2.02e-13 67.4
MS.gene059960.t1 MTR_7g013740 40.000 115 62 2 179 287 8 121 3.60e-22 90.5
MS.gene059960.t1 MTR_7g013740 40.964 83 47 1 112 194 41 121 1.56e-11 61.6
MS.gene059960.t1 MTR_4g109540 51.852 81 39 0 207 287 43 123 4.71e-22 93.2
MS.gene059960.t1 MTR_4g109540 39.759 83 48 1 112 194 43 123 6.60e-12 64.7
MS.gene059960.t1 MTR_3g080130 49.383 81 41 0 207 287 37 117 6.03e-22 89.4
MS.gene059960.t1 MTR_3g080130 39.286 84 49 1 112 193 37 120 2.36e-11 60.8
MS.gene059960.t1 MTR_5g030020 34.637 179 114 3 113 289 98 275 9.56e-22 93.2
MS.gene059960.t1 MTR_4g070140 53.247 77 36 0 207 283 9 85 1.04e-21 90.5
MS.gene059960.t1 MTR_4g070140 41.026 78 46 0 110 187 7 84 4.77e-13 66.6
MS.gene059960.t1 MTR_3g065190 32.402 179 112 2 108 285 22 192 1.87e-21 93.2
MS.gene059960.t1 MTR_2g097960 30.000 190 121 5 103 285 4 188 3.73e-21 92.8
MS.gene059960.t1 MTR_2g097960 27.723 202 109 3 110 280 107 302 1.79e-13 70.5
MS.gene059960.t1 MTR_4g086600 33.158 190 117 4 107 290 112 297 6.16e-21 92.4
MS.gene059960.t1 MTR_4g086600 25.126 199 118 4 106 279 209 401 1.26e-12 68.2
MS.gene059960.t1 MTR_4g109540 52.439 82 39 0 206 287 50 131 7.18e-21 90.1
MS.gene059960.t1 MTR_3g082650 28.814 177 117 4 112 288 19 186 2.18e-20 90.1
MS.gene059960.t1 MTR_3g025880 50.000 84 42 0 207 290 45 128 5.03e-20 89.7
MS.gene059960.t1 MTR_3g025880 40.000 85 49 1 110 194 43 125 5.15e-12 66.2
MS.gene059960.t1 MTR_3g055990 31.868 182 100 4 112 279 7 178 5.80e-20 89.7
MS.gene059960.t1 MTR_3g055990 33.544 158 93 5 49 199 42 194 4.15e-13 69.7
MS.gene059960.t1 MTR_3g055990 31.868 182 100 4 112 279 7 178 5.92e-20 89.7
MS.gene059960.t1 MTR_3g055990 33.544 158 93 5 49 199 42 194 4.13e-13 69.7
MS.gene059960.t1 MTR_7g013730 42.529 87 50 0 204 290 38 124 1.49e-19 86.3
MS.gene059960.t1 MTR_7g013730 42.683 82 47 0 112 193 41 122 9.10e-15 72.8
MS.gene059960.t1 MTR_4g124940 33.333 171 102 3 113 282 48 207 2.17e-19 87.8
MS.gene059960.t1 MTR_3g101370 27.919 197 110 5 108 289 90 269 2.79e-19 86.3
MS.gene059960.t1 MTR_2g026180 31.351 185 105 5 112 282 5 181 8.77e-19 86.3
MS.gene059960.t1 MTR_2g026180 38.043 92 55 2 107 197 102 192 5.57e-12 66.2
MS.gene059960.t1 MTR_3g084040 48.101 79 40 1 207 285 37 114 9.99e-19 81.3
MS.gene059960.t1 MTR_3g084040 35.577 104 65 2 90 192 14 116 9.48e-11 59.3
MS.gene059960.t1 MTR_3g101370 27.919 197 110 5 108 289 90 269 1.71e-18 85.1
MS.gene059960.t1 MTR_3g101370 26.178 191 125 4 110 290 186 370 1.42e-14 73.9
MS.gene059960.t1 MTR_5g097580 30.159 189 108 4 108 282 3 181 1.89e-18 85.5
MS.gene059960.t1 MTR_5g097580 30.818 159 105 5 52 206 45 202 1.79e-12 67.8
MS.gene059960.t1 MTR_5g097580 30.159 189 108 4 108 282 3 181 2.06e-18 85.1
MS.gene059960.t1 MTR_5g097580 30.818 159 105 5 52 206 45 202 2.21e-12 67.4
MS.gene059960.t1 MTR_1g020080 27.979 193 112 5 109 289 95 272 2.46e-18 83.6
MS.gene059960.t1 MTR_4g131970 29.379 177 116 4 113 285 76 247 3.93e-18 84.0
MS.gene059960.t1 MTR_4g131970 26.064 188 113 4 108 279 164 341 8.67e-15 74.3
MS.gene059960.t1 MTR_2g022950 28.977 176 120 3 113 285 62 235 7.27e-18 81.6
MS.gene059960.t1 MTR_2g022950 28.977 176 120 3 113 285 62 235 7.64e-18 82.0
MS.gene059960.t1 MTR_1g020080 27.979 193 112 5 109 289 95 272 1.01e-17 83.2
MS.gene059960.t1 MTR_1g020080 27.083 192 122 4 110 290 189 373 2.10e-16 79.3
MS.gene059960.t1 MTR_2g022950 28.977 176 120 3 113 285 62 235 4.36e-17 80.9
MS.gene059960.t1 MTR_2g022950 26.804 194 125 3 97 279 141 328 3.39e-14 72.4
MS.gene059960.t1 MTR_3g109090 30.058 173 109 3 113 284 62 223 1.62e-16 79.7
MS.gene059960.t1 MTR_3g109090 30.058 173 109 3 113 284 46 207 1.78e-16 79.3
MS.gene059960.t1 MTR_8g022050 30.899 178 111 3 106 282 57 223 3.99e-16 78.2
MS.gene059960.t1 MTR_1g073690 30.319 188 115 4 108 282 3 187 4.43e-16 78.6
MS.gene059960.t1 MTR_1g073690 43.210 81 45 1 112 192 113 192 3.65e-12 66.6
MS.gene059960.t1 MTR_6g004810 24.719 178 125 4 112 289 46 214 8.31e-16 77.0
MS.gene059960.t1 MTR_7g102730 27.957 186 121 4 113 288 191 373 8.96e-16 77.8
MS.gene059960.t1 MTR_7g102730 27.273 176 123 3 113 288 100 270 1.43e-15 77.0
MS.gene059960.t1 MTR_7g102730 28.571 168 110 3 113 279 12 170 8.86e-13 68.9
MS.gene059960.t1 MTR_1g115375 28.571 217 135 8 79 282 177 386 1.35e-15 77.0
MS.gene059960.t1 MTR_4g088010 29.825 171 111 4 112 282 77 238 2.18e-15 75.9
MS.gene059960.t1 MTR_6g040070 29.947 187 117 5 113 288 107 290 2.74e-15 76.3
MS.gene059960.t1 MTR_6g040070 31.461 178 113 5 113 288 17 187 7.96e-12 65.9
MS.gene059960.t1 MTR_6g040190 28.488 172 113 3 109 279 23 185 5.02e-15 75.5
MS.gene059960.t1 MTR_6g040190 29.255 188 117 5 113 288 202 385 5.88e-15 75.1
MS.gene059960.t1 MTR_1g061870 28.492 179 118 3 113 290 17 186 5.76e-15 75.1
MS.gene059960.t1 MTR_1g061870 27.473 182 123 4 113 288 196 374 6.85e-14 72.0
MS.gene059960.t1 MTR_1g061870 28.652 178 118 5 113 288 105 275 9.90e-13 68.6
MS.gene059960.t1 MTR_4g085540 29.167 168 109 3 113 279 36 194 7.30e-15 75.1
MS.gene059960.t1 MTR_4g085540 27.481 262 163 9 41 288 149 397 3.43e-14 73.2
MS.gene059960.t1 MTR_4g085540 29.944 177 117 5 113 288 124 294 1.80e-12 67.8
MS.gene059960.t1 MTR_8g463890 29.282 181 104 4 112 282 74 240 2.61e-14 73.2
MS.gene059960.t1 MTR_1g019150 26.786 168 113 3 113 279 34 192 4.26e-14 72.8
MS.gene059960.t1 MTR_1g019150 29.412 187 118 4 113 288 213 396 3.77e-13 69.7
MS.gene059960.t1 MTR_1g097440 27.239 268 157 8 41 288 145 394 6.34e-14 72.0
MS.gene059960.t1 MTR_3g084040 46.875 64 33 1 207 270 37 99 7.59e-14 66.6
MS.gene059960.t1 MTR_3g102040 26.786 168 113 3 113 279 26 184 1.17e-13 71.2
MS.gene059960.t1 MTR_3g102040 31.720 186 114 4 113 288 205 387 3.03e-12 67.0
MS.gene059960.t1 MTR_5g017280 29.714 175 112 5 109 282 2 166 3.01e-13 69.7
MS.gene059960.t1 MTR_5g017280 29.714 175 112 5 109 282 2 166 3.10e-13 69.7
MS.gene059960.t1 MTR_3g103420 26.904 197 127 4 103 285 2 195 3.50e-13 69.3
MS.gene059960.t1 MTR_3g014000 40.000 85 40 2 208 285 36 116 6.18e-13 65.1
MS.gene059960.t1 MTR_3g095230 27.807 187 119 6 106 280 209 391 6.95e-13 68.9
MS.gene059960.t1 MTR_4g036415 42.667 75 43 0 208 282 453 527 7.05e-13 69.3
MS.gene059960.t1 MTR_3g095230 27.807 187 119 6 106 280 209 391 7.08e-13 68.9
MS.gene059960.t1 MTR_7g105260 34.694 98 59 1 111 203 32 129 2.17e-12 63.9
MS.gene059960.t1 MTR_7g105260 32.558 86 58 0 205 290 31 116 7.27e-12 62.4
MS.gene059960.t1 MTR_8g092550 26.531 196 109 7 106 280 196 377 3.59e-12 67.0
MS.gene059960.t1 MTR_2g026180 38.043 92 55 2 107 197 32 122 3.95e-12 66.6
MS.gene059960.t1 MTR_3g029580 41.026 78 46 0 112 189 33 110 1.04e-11 61.6
MS.gene059960.t1 MTR_1g097280 40.789 76 45 0 208 283 31 106 1.73e-11 64.7
MS.gene059960.t1 MTR_4g063560 30.097 103 71 1 182 284 10 111 2.20e-11 60.1
MS.gene059960.t1 MTR_7g118120 28.409 176 118 5 112 283 185 356 2.93e-11 63.9
MS.gene059960.t1 MTR_3g092490 34.884 86 51 2 207 290 27 109 3.26e-11 61.2
MS.gene059960.t1 MTR_2g013130 26.396 197 112 5 112 279 16 208 3.28e-11 63.5
MS.gene059960.t1 MTR_7g094660 27.374 179 120 4 113 284 643 818 3.39e-11 63.9
MS.gene059960.t1 MTR_2g013130 26.396 197 112 5 112 279 59 251 4.54e-11 63.2
MS.gene059960.t1 MTR_4g122650 29.560 159 105 4 112 269 89 241 7.42e-11 63.2
MS.gene059960.t1 MTR_2g096560 37.037 81 51 0 205 285 6 86 7.87e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059960.t1 AT5G50250 60.417 288 92 5 4 288 21 289 2.67e-109 318
MS.gene059960.t1 AT4G24770 62.313 268 77 4 44 288 60 326 9.19e-107 313
MS.gene059960.t1 AT4G24770 62.313 268 77 4 44 288 60 326 9.19e-107 313
MS.gene059960.t1 AT2G37220 49.064 267 93 7 42 288 43 286 1.07e-64 205
MS.gene059960.t1 AT1G60000 41.935 217 100 3 70 285 65 256 4.16e-49 164
MS.gene059960.t1 AT3G52380 38.503 187 107 3 109 287 114 300 1.20e-41 146
MS.gene059960.t1 AT3G52380 40.230 87 52 0 112 198 220 306 5.07e-13 68.6
MS.gene059960.t1 AT3G52150 40.722 194 108 3 96 282 60 253 1.57e-34 125
MS.gene059960.t1 AT3G52150 40.000 100 56 1 189 284 55 154 2.69e-19 85.5
MS.gene059960.t1 AT3G52150 40.722 194 108 3 96 282 60 253 1.57e-34 125
MS.gene059960.t1 AT3G52150 40.000 100 56 1 189 284 55 154 2.69e-19 85.5
MS.gene059960.t1 AT2G35410 36.782 174 103 3 112 279 96 268 1.77e-30 116
MS.gene059960.t1 AT3G53460 60.976 82 32 0 207 288 258 339 9.42e-27 107
MS.gene059960.t1 AT3G53460 46.154 169 69 5 29 197 35 181 1.18e-24 101
MS.gene059960.t1 AT3G53460 47.727 88 46 0 201 288 94 181 2.42e-18 84.3
MS.gene059960.t1 AT3G53460 45.556 90 42 1 112 201 258 340 3.24e-18 84.0
MS.gene059960.t1 AT3G53460 60.976 82 32 0 207 288 258 339 9.42e-27 107
MS.gene059960.t1 AT3G53460 46.154 169 69 5 29 197 35 181 1.18e-24 101
MS.gene059960.t1 AT3G53460 47.727 88 46 0 201 288 94 181 2.42e-18 84.3
MS.gene059960.t1 AT3G53460 45.556 90 42 1 112 201 258 340 3.24e-18 84.0
MS.gene059960.t1 AT3G53460 60.976 82 32 0 207 288 258 339 9.42e-27 107
MS.gene059960.t1 AT3G53460 46.154 169 69 5 29 197 35 181 1.18e-24 101
MS.gene059960.t1 AT3G53460 47.727 88 46 0 201 288 94 181 2.42e-18 84.3
MS.gene059960.t1 AT3G53460 45.556 90 42 1 112 201 258 340 3.24e-18 84.0
MS.gene059960.t1 AT3G53460 60.976 82 32 0 207 288 279 360 1.35e-26 107
MS.gene059960.t1 AT3G53460 40.526 190 70 6 29 197 35 202 4.04e-20 89.4
MS.gene059960.t1 AT3G53460 45.556 90 42 1 112 201 279 361 3.96e-18 84.0
MS.gene059960.t1 AT3G53460 37.615 109 47 1 201 288 94 202 9.62e-15 73.9
MS.gene059960.t1 AT3G23830 55.172 87 36 1 207 290 36 122 2.08e-25 98.6
MS.gene059960.t1 AT3G23830 45.238 84 45 1 112 194 36 119 5.98e-14 68.2
MS.gene059960.t1 AT3G23830 55.172 87 36 1 207 290 36 122 2.08e-25 98.6
MS.gene059960.t1 AT3G23830 45.238 84 45 1 112 194 36 119 5.98e-14 68.2
MS.gene059960.t1 AT1G01080 34.375 192 111 4 101 279 95 284 7.45e-24 98.6
MS.gene059960.t1 AT1G01080 34.197 193 111 5 101 279 95 285 4.69e-23 96.7
MS.gene059960.t1 AT2G21660 51.948 77 37 0 207 283 9 85 5.05e-22 90.5
MS.gene059960.t1 AT2G21660 42.105 76 44 0 112 187 9 84 6.58e-12 62.8
MS.gene059960.t1 AT3G16380 35.484 186 106 5 113 288 204 385 5.82e-22 95.9
MS.gene059960.t1 AT3G16380 32.203 177 112 4 113 288 114 283 1.80e-14 73.9
MS.gene059960.t1 AT2G21660 51.948 77 37 0 207 283 9 85 7.67e-22 90.5
MS.gene059960.t1 AT2G21660 42.105 76 44 0 112 187 9 84 9.06e-12 62.8
MS.gene059960.t1 AT1G01080 34.066 182 105 4 101 269 95 274 9.91e-22 92.8
MS.gene059960.t1 AT4G13850 48.750 80 41 0 207 286 36 115 2.07e-21 87.8
MS.gene059960.t1 AT4G13850 48.750 80 41 0 207 286 36 115 2.88e-21 87.8
MS.gene059960.t1 AT4G13850 41.667 84 48 1 112 194 36 119 5.06e-11 60.1
MS.gene059960.t1 AT4G13850 48.750 80 41 0 207 286 36 115 3.62e-21 87.8
MS.gene059960.t1 AT4G13850 41.667 84 48 1 112 194 36 119 6.06e-11 60.1
MS.gene059960.t1 AT4G13850 48.750 80 41 0 207 286 36 115 4.11e-21 87.8
MS.gene059960.t1 AT4G13850 41.667 84 48 1 112 194 36 119 6.67e-11 60.1
MS.gene059960.t1 AT4G39260 48.101 79 41 0 207 285 7 85 2.25e-20 84.0
MS.gene059960.t1 AT4G39260 40.964 83 49 0 110 192 5 87 7.30e-15 69.3
MS.gene059960.t1 AT5G19350 30.303 198 111 5 102 285 12 196 2.86e-20 90.5
MS.gene059960.t1 AT5G19350 24.870 193 117 4 110 280 115 301 7.03e-11 62.8
MS.gene059960.t1 AT5G19350 30.303 198 111 5 102 285 12 196 2.90e-20 90.5
MS.gene059960.t1 AT5G19350 24.873 197 116 4 110 280 115 305 6.70e-11 62.8
MS.gene059960.t1 AT2G18510 30.387 181 117 2 106 285 20 192 6.55e-20 89.0
MS.gene059960.t1 AT4G39260 48.052 77 40 0 207 283 7 83 1.42e-19 82.8
MS.gene059960.t1 AT4G39260 42.105 76 44 0 112 187 7 82 6.73e-13 64.7
MS.gene059960.t1 AT3G14100 33.520 179 109 4 106 284 54 222 3.77e-19 87.4
MS.gene059960.t1 AT3G14100 29.032 186 102 3 105 264 138 319 4.21e-11 63.5
MS.gene059960.t1 AT4G39260 48.052 77 40 0 207 283 7 83 4.12e-19 82.8
MS.gene059960.t1 AT4G39260 42.105 76 44 0 112 187 7 82 1.68e-12 64.7
MS.gene059960.t1 AT4G26650 29.167 192 118 5 106 282 6 194 5.45e-19 87.0
MS.gene059960.t1 AT4G26650 36.667 90 54 2 112 199 120 208 1.03e-11 65.5
MS.gene059960.t1 AT4G26650 29.167 192 118 5 106 282 9 197 6.18e-19 86.7
MS.gene059960.t1 AT4G26650 36.667 90 54 2 112 199 123 211 1.11e-11 65.1
MS.gene059960.t1 AT5G61030 45.570 79 43 0 207 285 41 119 1.25e-18 84.7
MS.gene059960.t1 AT5G61030 39.241 79 48 0 112 190 41 119 2.96e-12 66.2
MS.gene059960.t1 AT5G61030 45.570 79 43 0 207 285 41 119 1.25e-18 84.7
MS.gene059960.t1 AT5G61030 39.241 79 48 0 112 190 41 119 2.96e-12 66.2
MS.gene059960.t1 AT5G40490 28.161 174 118 3 112 285 43 209 1.65e-18 85.5
MS.gene059960.t1 AT1G22760 27.881 269 155 8 41 288 163 413 2.47e-18 85.5
MS.gene059960.t1 AT1G17370 31.844 179 112 3 106 284 49 217 5.63e-18 84.0
MS.gene059960.t1 AT1G17370 29.000 200 114 5 105 280 133 328 5.32e-12 66.2
MS.gene059960.t1 AT1G17370 32.203 177 110 3 106 282 49 215 6.10e-18 83.6
MS.gene059960.t1 AT1G17370 28.571 203 114 5 105 280 133 331 5.76e-12 65.9
MS.gene059960.t1 AT3G08000 44.444 81 45 0 207 287 42 122 6.95e-18 79.0
MS.gene059960.t1 AT3G19130 32.447 188 114 6 109 290 105 285 7.54e-18 83.6
MS.gene059960.t1 AT1G17640 28.652 178 121 3 112 289 67 238 7.93e-18 82.8
MS.gene059960.t1 AT1G17640 28.652 178 121 3 112 289 67 238 7.93e-18 82.8
MS.gene059960.t1 AT1G17640 28.652 178 121 3 112 289 67 238 7.93e-18 82.8
MS.gene059960.t1 AT5G47620 28.191 188 111 4 109 282 4 181 1.56e-17 82.4
MS.gene059960.t1 AT5G47620 28.191 188 111 4 109 282 4 181 1.56e-17 82.4
MS.gene059960.t1 AT5G47620 28.191 188 111 4 109 282 4 181 1.56e-17 82.4
MS.gene059960.t1 AT1G49600 30.457 197 104 6 109 289 116 295 1.67e-17 82.4
MS.gene059960.t1 AT1G49600 28.497 193 113 5 106 279 208 394 1.16e-11 65.1
MS.gene059960.t1 AT1G49600 30.457 197 104 6 109 289 116 295 1.67e-17 82.4
MS.gene059960.t1 AT1G49600 28.497 193 113 5 106 279 208 394 1.16e-11 65.1
MS.gene059960.t1 AT4G34110 30.357 168 107 3 113 279 38 196 1.82e-17 82.8
MS.gene059960.t1 AT4G34110 30.508 177 116 4 113 288 126 296 5.19e-15 75.5
MS.gene059960.t1 AT4G34110 26.882 186 123 4 113 288 217 399 2.01e-12 67.8
MS.gene059960.t1 AT3G07810 30.270 185 109 4 108 279 3 180 2.05e-17 82.4
MS.gene059960.t1 AT3G07810 39.252 107 62 3 94 199 92 196 4.37e-13 69.7
MS.gene059960.t1 AT3G07810 30.270 185 109 4 108 279 3 180 2.26e-17 82.4
MS.gene059960.t1 AT3G07810 39.252 107 62 3 94 199 92 196 4.84e-13 69.3
MS.gene059960.t1 AT1G49600 30.457 197 104 6 109 289 116 295 3.77e-17 81.6
MS.gene059960.t1 AT1G49600 28.497 193 113 5 106 279 208 394 1.39e-11 65.1
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 4.41e-17 81.3
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.11e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 4.41e-17 81.3
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.11e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 4.41e-17 81.3
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.11e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 4.41e-17 81.3
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.11e-13 68.6
MS.gene059960.t1 AT5G54900 29.730 185 117 4 108 285 56 234 5.03e-17 80.9
MS.gene059960.t1 AT5G54900 28.191 188 116 5 104 279 147 327 7.13e-15 74.7
MS.gene059960.t1 AT1G49760 29.762 168 108 3 113 279 47 205 5.23e-17 81.6
MS.gene059960.t1 AT1G49760 28.977 176 120 3 113 288 135 305 4.97e-14 72.8
MS.gene059960.t1 AT1G49760 28.638 213 130 7 95 288 199 408 5.68e-12 66.2
MS.gene059960.t1 AT1G49760 29.762 168 108 3 113 279 47 205 5.23e-17 81.6
MS.gene059960.t1 AT1G49760 28.977 176 120 3 113 288 135 305 4.97e-14 72.8
MS.gene059960.t1 AT1G49760 28.638 213 130 7 95 288 199 408 5.68e-12 66.2
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 5.66e-17 80.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.26e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 5.66e-17 80.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.26e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 5.66e-17 80.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.26e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 5.66e-17 80.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.26e-13 68.6
MS.gene059960.t1 AT5G55550 29.121 182 115 4 112 282 7 185 5.66e-17 80.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 111 188 9.26e-13 68.6
MS.gene059960.t1 AT3G13224 26.257 179 125 3 112 290 11 182 7.15e-17 80.1
MS.gene059960.t1 AT1G71770 30.645 186 116 4 113 288 241 423 8.56e-17 80.9
MS.gene059960.t1 AT1G71770 30.978 184 118 4 113 290 148 328 5.32e-15 75.5
MS.gene059960.t1 AT1G71770 30.645 186 116 4 113 288 241 423 8.56e-17 80.9
MS.gene059960.t1 AT1G71770 30.978 184 118 4 113 290 148 328 5.32e-15 75.5
MS.gene059960.t1 AT3G13224 26.257 179 125 4 112 290 20 191 1.65e-16 79.0
MS.gene059960.t1 AT1G74230 47.436 78 40 1 207 284 35 111 2.18e-16 77.8
MS.gene059960.t1 AT1G54080 30.508 177 113 4 106 282 58 224 2.50e-16 79.0
MS.gene059960.t1 AT1G11650 29.213 178 115 4 113 285 64 235 2.84e-16 77.8
MS.gene059960.t1 AT3G13224 27.273 154 107 2 112 265 20 168 3.21e-16 76.6
MS.gene059960.t1 AT1G47490 30.978 184 115 5 109 285 99 277 3.60e-16 77.8
MS.gene059960.t1 AT1G34140 31.892 185 110 5 113 285 121 301 3.62e-16 78.6
MS.gene059960.t1 AT1G34140 30.899 178 113 5 113 289 33 201 3.70e-12 66.6
MS.gene059960.t1 AT1G47500 29.648 199 108 6 109 290 101 284 5.16e-16 77.4
MS.gene059960.t1 AT1G11650 29.213 178 115 4 113 285 64 235 5.66e-16 77.8
MS.gene059960.t1 AT1G11650 27.419 186 114 4 108 280 152 329 2.59e-12 67.0
MS.gene059960.t1 AT4G14300 30.108 186 116 4 108 282 3 185 9.13e-16 77.4
MS.gene059960.t1 AT4G14300 30.108 186 116 4 108 282 3 185 9.13e-16 77.4
MS.gene059960.t1 AT1G47490 30.811 185 116 5 108 285 98 277 1.05e-15 77.0
MS.gene059960.t1 AT1G47490 27.586 203 125 5 104 290 190 386 3.20e-15 75.9
MS.gene059960.t1 AT1G47500 28.079 203 124 5 104 290 192 388 1.06e-15 77.0
MS.gene059960.t1 AT1G47500 29.648 199 108 6 109 290 101 284 1.53e-15 76.6
MS.gene059960.t1 AT4G27000 29.508 183 108 4 113 285 82 253 1.88e-15 76.3
MS.gene059960.t1 AT2G36660 25.468 267 162 8 42 290 140 387 2.19e-15 76.6
MS.gene059960.t1 AT5G40490 27.097 155 106 3 131 285 45 192 2.37e-15 75.9
MS.gene059960.t1 AT3G26420 42.308 78 45 0 206 283 7 84 2.44e-15 74.3
MS.gene059960.t1 AT3G26420 33.654 104 65 2 105 206 3 104 2.53e-11 62.8
MS.gene059960.t1 AT4G36960 30.994 171 109 5 112 282 4 165 2.54e-15 75.9
MS.gene059960.t1 AT4G36960 30.994 171 109 5 112 282 4 165 2.54e-15 75.9
MS.gene059960.t1 AT1G54080 30.387 181 112 5 106 282 58 228 5.04e-15 75.1
MS.gene059960.t1 AT5G06210 35.789 95 54 1 112 199 35 129 5.64e-15 71.2
MS.gene059960.t1 AT5G06210 36.709 79 50 0 207 285 35 113 3.39e-12 63.5
MS.gene059960.t1 AT3G15010 31.818 176 93 6 112 273 76 238 5.75e-15 75.1
MS.gene059960.t1 AT3G15010 31.818 176 93 6 112 273 76 238 5.75e-15 75.1
MS.gene059960.t1 AT2G23350 30.357 168 107 3 113 279 48 206 9.00e-15 74.7
MS.gene059960.t1 AT2G23350 29.084 251 151 9 52 288 172 409 2.00e-14 73.9
MS.gene059960.t1 AT2G23350 29.213 178 121 3 113 290 136 308 3.91e-13 70.1
MS.gene059960.t1 AT5G47320 45.000 80 44 0 207 286 32 111 1.34e-14 71.6
MS.gene059960.t1 AT4G09040 28.261 184 115 5 105 279 88 263 1.55e-14 72.8
MS.gene059960.t1 AT4G09040 28.249 177 110 5 112 279 35 203 1.62e-14 72.0
MS.gene059960.t1 AT1G60650 41.558 77 45 0 207 283 13 89 1.62e-14 72.8
MS.gene059960.t1 AT1G60650 36.709 79 50 0 112 190 13 91 1.80e-12 66.6
MS.gene059960.t1 AT1G60650 41.558 77 45 0 207 283 13 89 1.62e-14 72.8
MS.gene059960.t1 AT1G60650 36.709 79 50 0 112 190 13 91 1.80e-12 66.6
MS.gene059960.t1 AT4G13860 46.667 75 40 0 207 281 4 78 2.42e-14 67.8
MS.gene059960.t1 AT4G13860 45.205 73 40 0 112 184 4 76 3.93e-11 58.9
MS.gene059960.t1 AT5G47620 25.714 210 110 5 109 282 4 203 4.26e-14 72.4
MS.gene059960.t1 AT2G33410 29.032 186 118 4 108 282 3 185 4.71e-14 72.4
MS.gene059960.t1 AT5G19960 43.038 79 44 1 202 280 3 80 6.37e-14 71.2
MS.gene059960.t1 AT3G46020 41.558 77 45 0 207 283 8 84 7.52e-14 66.6
MS.gene059960.t1 AT4G39260 45.161 62 34 0 207 268 7 68 2.08e-13 65.5
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 158 235 8.12e-13 68.9
MS.gene059960.t1 AT5G55550 40.506 79 46 1 112 190 158 235 8.47e-13 68.6
MS.gene059960.t1 AT2G21690 36.957 92 53 1 201 287 2 93 1.35e-12 63.9
MS.gene059960.t1 AT1G48920 29.630 189 112 7 113 286 299 481 2.90e-12 67.0
MS.gene059960.t1 AT5G04280 38.554 83 51 0 201 283 2 84 3.67e-12 66.2
MS.gene059960.t1 AT1G18630 42.857 77 44 0 207 283 37 113 4.51e-12 63.2
MS.gene059960.t1 AT5G59865 35.417 96 57 2 198 290 15 108 8.76e-12 61.2
MS.gene059960.t1 AT5G09880 26.111 180 127 4 106 280 162 340 1.71e-11 64.7
MS.gene059960.t1 AT3G18610 29.891 184 114 7 113 289 326 501 2.53e-11 64.3
MS.gene059960.t1 AT3G18610 29.891 184 114 7 113 289 356 531 2.74e-11 64.3
MS.gene059960.t1 AT3G18610 29.891 184 114 7 113 289 386 561 3.29e-11 63.9
MS.gene059960.t1 AT2G41060 28.125 192 120 8 109 288 123 308 5.03e-11 63.2
MS.gene059960.t1 AT2G41060 28.125 192 120 8 109 288 123 308 5.03e-11 63.2
MS.gene059960.t1 AT2G41060 28.125 192 120 8 109 288 123 308 5.03e-11 63.2
MS.gene059960.t1 AT5G51300 35.227 88 57 0 195 282 469 556 5.80e-11 63.5
MS.gene059960.t1 AT5G51300 35.227 88 57 0 195 282 469 556 5.80e-11 63.5
MS.gene059960.t1 AT5G51300 35.227 88 57 0 195 282 469 556 5.80e-11 63.5
MS.gene059960.t1 AT1G76460 42.529 87 48 2 112 198 25 109 7.43e-11 62.0

Find 74 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCACGTGCCTTTAATTC+CGG 0.221097 8.1:+20028615 MS.gene059960:CDS
GACTCTTAACCCGGAATTAA+AGG 0.236122 8.1:-20028625 None:intergenic
GATTTCAGGTAATTTATAAT+AGG 0.246037 8.1:+20027431 MS.gene059960:intron
ACCGGTCGATCACGTGGTTT+TGG 0.287148 8.1:+20028750 MS.gene059960:CDS
AAGATTGTTGACGGTTAATA+AGG 0.297325 8.1:+20028560 MS.gene059960:CDS
ATTAGAGATGAATGGGGATT+TGG 0.299053 8.1:-20026817 None:intergenic
TTCAGAAGGTTCTTCAAAAC+TGG 0.313144 8.1:-20027072 None:intergenic
TGATGTTGATAGTGAGAAAT+TGG 0.321993 8.1:+20027127 MS.gene059960:CDS
ATTTCAGGTAATTTATAATA+GGG 0.339616 8.1:+20027432 MS.gene059960:intron
GATGAATGGGGATTTGGATT+TGG 0.358060 8.1:-20026811 None:intergenic
GACATCTGACTGGGCTCAAC+AGG 0.358598 8.1:+20026959 MS.gene059960:CDS
TGGTGGAATTAGAGATGAAT+GGG 0.377474 8.1:-20026824 None:intergenic
TTGCACTCAGAAAGAGCGCC+TGG 0.386784 8.1:-20029028 None:intergenic
CACCACGTGCCTTTAATTCC+GGG 0.401106 8.1:+20028616 MS.gene059960:CDS
TCAGGCCGTGGTGCTCCTCT+TGG 0.412575 8.1:-20028588 None:intergenic
CGTGGTGGGCGCTCAGGCCG+TGG 0.417711 8.1:-20028600 None:intergenic
GATGCCATTGCTGCTCTTGA+CGG 0.429405 8.1:+20028807 MS.gene059960:CDS
AGAATGGCGGGTTCTTCTCT+TGG 0.430248 8.1:-20026913 None:intergenic
CATTGCTGCTCTTGACGGTC+AGG 0.446304 8.1:+20028812 MS.gene059960:CDS
AAGGCACGTGGTGGGCGCTC+AGG 0.460135 8.1:-20028606 None:intergenic
AATTTAGAAGAATTGTAAGA+TGG 0.465429 8.1:-20026867 None:intergenic
TTCTCACTATCAACATCAAA+AGG 0.466331 8.1:-20027122 None:intergenic
ACTGACAGAAGTCGTGGGTT+CGG 0.474290 8.1:+20027457 MS.gene059960:CDS
AGAATCAAGCGGATGCTACA+TGG 0.475835 8.1:+20027009 MS.gene059960:CDS
ATTTAGAAGAATTGTAAGAT+GGG 0.486739 8.1:-20026866 None:intergenic
ATGGTAAGGTTGAGAGTGCT+CGG 0.500904 8.1:+20028709 MS.gene059960:CDS
AGAAGGAAGATGGTGCTACA+TGG 0.505576 8.1:+20026985 MS.gene059960:CDS
TTGGTGGAATTAGAGATGAA+TGG 0.508679 8.1:-20026825 None:intergenic
GCCAAAACCACGTGATCGAC+CGG 0.510620 8.1:-20028751 None:intergenic
TGTTGCAGAGCTTGGATGGA+AGG 0.517845 8.1:+20028974 MS.gene059960:intron
GGACGTTGACAATTCTAGCT+TGG 0.523595 8.1:+20028668 MS.gene059960:CDS
TTTGTGTGACAGGAATTAGA+TGG 0.524441 8.1:+20028537 MS.gene059960:intron
CAAGCGGATGCTACATGGGT+TGG 0.526184 8.1:+20027014 MS.gene059960:CDS
TTGAAGTTTGAAGGGTTTGG+TGG 0.532123 8.1:-20026841 None:intergenic
ATTAGATGGAAGATTGTTGA+CGG 0.532874 8.1:+20028551 MS.gene059960:CDS
TTTATGTTGCAGAGCTTGGA+TGG 0.542421 8.1:+20028970 MS.gene059960:intron
TTGTTGCACAGACATCTGAC+TGG 0.549045 8.1:+20026949 MS.gene059960:CDS
GTTGCAGAGCTTGGATGGAA+GGG 0.550513 8.1:+20028975 MS.gene059960:intron
CAAATGTAACGAAAGAAGAA+TGG 0.552797 8.1:-20026929 None:intergenic
AAAATCTTCAAATCTTCAGA+AGG 0.556211 8.1:-20027086 None:intergenic
CTGGGCTCAACAGGAAGAGA+AGG 0.560096 8.1:+20026968 MS.gene059960:CDS
CAACAGGAAGAGAAGGAAGA+TGG 0.562683 8.1:+20026975 MS.gene059960:CDS
GAGTGAATGTTGCTGAGGAA+AGG 0.566504 8.1:+20029004 MS.gene059960:CDS
TCTATGTTGGTAACTTGCCA+TGG 0.567162 8.1:+20028646 MS.gene059960:CDS
CTGACCGTCAAGAGCAGCAA+TGG 0.575843 8.1:-20028811 None:intergenic
TGTAACGAAAGAAGAATGGC+GGG 0.581991 8.1:-20026925 None:intergenic
GAAGGAAGATGGTGCTACAT+GGG 0.582115 8.1:+20026986 MS.gene059960:CDS
GATTTGGTGTAGAAGAGTGA+AGG 0.586581 8.1:-20026795 None:intergenic
TGCACTCAGAAAGAGCGCCT+GGG 0.586838 8.1:-20029027 None:intergenic
CGGAATTAAAGGCACGTGGT+GGG 0.588703 8.1:-20028614 None:intergenic
AGGGACACTGACAGAAGTCG+TGG 0.593858 8.1:+20027451 MS.gene059960:CDS
GGTGGAATTAGAGATGAATG+GGG 0.594202 8.1:-20026823 None:intergenic
GTCGTCTATGACAGAGAGAC+CGG 0.595654 8.1:+20028732 MS.gene059960:CDS
TGGTAAGGTTGAGAGTGCTC+GGG 0.596060 8.1:+20028710 MS.gene059960:CDS
GAATCAAGCGGATGCTACAT+GGG 0.596208 8.1:+20027010 MS.gene059960:CDS
CTAGAATTGTCAACGTCCCA+TGG 0.600424 8.1:-20028663 None:intergenic
ACCAACATAGACTCTTAACC+CGG 0.608783 8.1:-20028634 None:intergenic
ATGTTGCTGAGGAAAGGCCC+AGG 0.609601 8.1:+20029010 MS.gene059960:CDS
CTATGTTGGTAACTTGCCAT+GGG 0.609681 8.1:+20028647 MS.gene059960:CDS
GTTAATAAGGCCGCTCCAAG+AGG 0.610797 8.1:+20028573 MS.gene059960:CDS
TGTTGCACAGACATCTGACT+GGG 0.615860 8.1:+20026950 MS.gene059960:CDS
CCGGAATTAAAGGCACGTGG+TGG 0.624652 8.1:-20028615 None:intergenic
TCCGGGTTAAGAGTCTATGT+TGG 0.627644 8.1:+20028633 MS.gene059960:CDS
CCGTGGTGCTCCTCTTGGAG+CGG 0.632907 8.1:-20028583 None:intergenic
ATGTAACGAAAGAAGAATGG+CGG 0.637032 8.1:-20026926 None:intergenic
CTTTGTTACAATGAGCAATG+AGG 0.656628 8.1:+20028773 MS.gene059960:CDS
AGAGAGACCGGTCGATCACG+TGG 0.657027 8.1:+20028744 MS.gene059960:CDS
AATTAGAGTGAATGTTGCTG+AGG 0.660198 8.1:+20028999 MS.gene059960:CDS
AGAGCTGTGAACAAATTCAG+TGG 0.671971 8.1:+20027514 MS.gene059960:CDS
TGCTACATGGGAGAATCAAG+CGG 0.674549 8.1:+20026998 MS.gene059960:CDS
CCGCTCCAAGAGGAGCACCA+CGG 0.696609 8.1:+20028583 MS.gene059960:CDS
AACCCGGAATTAAAGGCACG+TGG 0.703447 8.1:-20028618 None:intergenic
GGGACACTGACAGAAGTCGT+GGG 0.707773 8.1:+20027452 MS.gene059960:CDS
TGGGACTGTTGAGATTGCTG+AGG 0.714996 8.1:+20027169 MS.gene059960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATATTAATAATATACA+TGG - chr8.1:20028464-20028483 None:intergenic 10.0%
!!! ATTTGTTTTTCAAAAAATTA+AGG - chr8.1:20027751-20027770 None:intergenic 10.0%
!! AAAACAAATAAATTTGTACA+TGG + chr8.1:20027762-20027781 MS.gene059960:intron 15.0%
!!! ATTTCAGGTAATTTATAATA+GGG + chr8.1:20027432-20027451 MS.gene059960:intron 15.0%
!! AAAAAAAACACTCTAAATTG+TGG + chr8.1:20027334-20027353 MS.gene059960:intron 20.0%
!! AATTTAGAAGAATTGTAAGA+TGG - chr8.1:20026870-20026889 None:intergenic 20.0%
!! ATTGATGTTATGTTGAATTA+TGG + chr8.1:20027309-20027328 MS.gene059960:intron 20.0%
!! ATTTAGAAGAATTGTAAGAT+GGG - chr8.1:20026869-20026888 None:intergenic 20.0%
!! TAATTTGAACTTTATCCTTA+AGG - chr8.1:20027668-20027687 None:intergenic 20.0%
!! TATATGTTTGTATCATTACA+AGG + chr8.1:20028929-20028948 MS.gene059960:intron 20.0%
!! TTAAGACTAAAACTTGTAAT+TGG + chr8.1:20028196-20028215 MS.gene059960:intron 20.0%
!! TTCTCCAATATAAATGTAAA+TGG - chr8.1:20028001-20028020 None:intergenic 20.0%
!!! AAGATTTGAAGATTTTTGTT+GGG + chr8.1:20027093-20027112 MS.gene059960:CDS 20.0%
!!! AATGCCATTTACATTTATAT+TGG + chr8.1:20027994-20028013 MS.gene059960:intron 20.0%
!!! GATTTCAGGTAATTTATAAT+AGG + chr8.1:20027431-20027450 MS.gene059960:intron 20.0%
!!! TTTTCTAATTGTTCTTTATG+TGG + chr8.1:20028483-20028502 MS.gene059960:intron 20.0%
! AAAATCTTCAAATCTTCAGA+AGG - chr8.1:20027089-20027108 None:intergenic 25.0%
! ACTTTGGTATTATAACCTTA+AGG + chr8.1:20027650-20027669 MS.gene059960:intron 25.0%
! ATAAAGTTCAAATTATCTCG+GGG + chr8.1:20027673-20027692 MS.gene059960:intron 25.0%
! ATTCTCTAACAATTACGAAA+TGG - chr8.1:20027232-20027251 None:intergenic 25.0%
! GATAAAGTTCAAATTATCTC+GGG + chr8.1:20027672-20027691 MS.gene059960:intron 25.0%
! GGATAAAGTTCAAATTATCT+CGG + chr8.1:20027671-20027690 MS.gene059960:intron 25.0%
! TGACTTCATTGATAAAACTT+TGG + chr8.1:20027634-20027653 MS.gene059960:intron 25.0%
!! ACAATGCTTCAAGATTTTAA+CGG + chr8.1:20028152-20028171 MS.gene059960:intron 25.0%
!! GAAGATTTGAAGATTTTTGT+TGG + chr8.1:20027092-20027111 MS.gene059960:CDS 25.0%
!!! AAAGCATTTTTAGACATTTG+AGG + chr8.1:20028077-20028096 MS.gene059960:intron 25.0%
AAGATTGTTGACGGTTAATA+AGG + chr8.1:20028560-20028579 MS.gene059960:CDS 30.0%
AATGCAGAAAAGTAACATGA+AGG + chr8.1:20028435-20028454 MS.gene059960:intron 30.0%
ACACAGTAAGACGATATAAA+GGG - chr8.1:20027554-20027573 None:intergenic 30.0%
ATCAATGAAGTCATACATCA+TGG - chr8.1:20027627-20027646 None:intergenic 30.0%
ATTAGATGGAAGATTGTTGA+CGG + chr8.1:20028551-20028570 MS.gene059960:CDS 30.0%
CAAATGTAACGAAAGAAGAA+TGG - chr8.1:20026932-20026951 None:intergenic 30.0%
GGAACAAAATTTCAAAGACT+TGG - chr8.1:20028341-20028360 None:intergenic 30.0%
TTCTCACTATCAACATCAAA+AGG - chr8.1:20027125-20027144 None:intergenic 30.0%
TTGTGCTGTATTCATGAAAA+GGG + chr8.1:20028053-20028072 MS.gene059960:intron 30.0%
! AATTTTTATGTTGCAGAGCT+TGG + chr8.1:20028966-20028985 MS.gene059960:intron 30.0%
! CTTAACATTTTACCAACTCA+TGG - chr8.1:20028181-20028200 None:intergenic 30.0%
!! TGATGTTGATAGTGAGAAAT+TGG + chr8.1:20027127-20027146 MS.gene059960:CDS 30.0%
!!! TTCTCATGTTTTGTTTCAGT+TGG - chr8.1:20027856-20027875 None:intergenic 30.0%
AATTAGAGTGAATGTTGCTG+AGG + chr8.1:20028999-20029018 MS.gene059960:CDS 35.0%
ACAGCACAACATCAATTTAG+AGG - chr8.1:20028042-20028061 None:intergenic 35.0%
ATCTAATTCCTGTCACACAA+AGG - chr8.1:20028538-20028557 None:intergenic 35.0%
ATGTAACGAAAGAAGAATGG+CGG - chr8.1:20026929-20026948 None:intergenic 35.0%
ATTAGAGATGAATGGGGATT+TGG - chr8.1:20026820-20026839 None:intergenic 35.0%
CACACAGTAAGACGATATAA+AGG - chr8.1:20027555-20027574 None:intergenic 35.0%
CACAGTAAGACGATATAAAG+GGG - chr8.1:20027553-20027572 None:intergenic 35.0%
CCATCTTCAAACAAAGTGAT+AGG - chr8.1:20028362-20028381 None:intergenic 35.0%
CTTTGTTACAATGAGCAATG+AGG + chr8.1:20028773-20028792 MS.gene059960:CDS 35.0%
GAGCAAAACATTGTTAGAAC+AGG - chr8.1:20028122-20028141 None:intergenic 35.0%
GTTGTGCTGTATTCATGAAA+AGG + chr8.1:20028052-20028071 MS.gene059960:intron 35.0%
TAATTCATCCTTTGTGTGAC+AGG + chr8.1:20028527-20028546 MS.gene059960:intron 35.0%
TCTAATCATCAAATGTCCAG+AGG - chr8.1:20028231-20028250 None:intergenic 35.0%
TGGTGGAATTAGAGATGAAT+GGG - chr8.1:20026827-20026846 None:intergenic 35.0%
TTCAGAAGGTTCTTCAAAAC+TGG - chr8.1:20027075-20027094 None:intergenic 35.0%
TTCCACTTCAAAGTATGTGT+AGG - chr8.1:20027885-20027904 None:intergenic 35.0%
TTGGTGGAATTAGAGATGAA+TGG - chr8.1:20026828-20026847 None:intergenic 35.0%
TTTGTGTGACAGGAATTAGA+TGG + chr8.1:20028537-20028556 MS.gene059960:intron 35.0%
! ACACTTTTGTACATGCAGAA+AGG - chr8.1:20028388-20028407 None:intergenic 35.0%
! ATCCTACACATACTTTGAAG+TGG + chr8.1:20027880-20027899 MS.gene059960:intron 35.0%
! CCTATCACTTTGTTTGAAGA+TGG + chr8.1:20028359-20028378 MS.gene059960:intron 35.0%
! GACAACTGTTTTGTGATTTC+AGG + chr8.1:20027417-20027436 MS.gene059960:intron 35.0%
! TTTGAGACAACGTTATGAAG+AGG + chr8.1:20028904-20028923 MS.gene059960:intron 35.0%
!! ATGCTTCAAGATTTTAACGG+TGG + chr8.1:20028155-20028174 MS.gene059960:intron 35.0%
!! CATTTTTAGACATTTGAGGC+TGG + chr8.1:20028081-20028100 MS.gene059960:intron 35.0%
!! TAATTGGTAGTTTTTGCCTC+TGG + chr8.1:20028212-20028231 MS.gene059960:intron 35.0%
!! TGTGGTTTGCGTAATTGTTT+TGG + chr8.1:20028501-20028520 MS.gene059960:intron 35.0%
!!! AGATGGGTTTTGAAGTTTGA+AGG - chr8.1:20026853-20026872 None:intergenic 35.0%
!!! GATGGGTTTTGAAGTTTGAA+GGG - chr8.1:20026852-20026871 None:intergenic 35.0%
!!! GTTTTGAAGTTTGAAGGGTT+TGG - chr8.1:20026847-20026866 None:intergenic 35.0%
!!! TCATGTTTTGTTTCAGTTGG+CGG - chr8.1:20027853-20027872 None:intergenic 35.0%
ACCAACATAGACTCTTAACC+CGG - chr8.1:20028637-20028656 None:intergenic 40.0%
AGAGCTGTGAACAAATTCAG+TGG + chr8.1:20027514-20027533 MS.gene059960:CDS 40.0%
ATTCGTAACATACCATGCGT+TGG + chr8.1:20028863-20028882 MS.gene059960:intron 40.0%
GACTCTTAACCCGGAATTAA+AGG - chr8.1:20028628-20028647 None:intergenic 40.0%
GATGAATGGGGATTTGGATT+TGG - chr8.1:20026814-20026833 None:intergenic 40.0%
GGTGGAATTAGAGATGAATG+GGG - chr8.1:20026826-20026845 None:intergenic 40.0%
TGTAACGAAAGAAGAATGGC+GGG - chr8.1:20026928-20026947 None:intergenic 40.0%
TTGAAGTTTGAAGGGTTTGG+TGG - chr8.1:20026844-20026863 None:intergenic 40.0%
TTTATGTTGCAGAGCTTGGA+TGG + chr8.1:20028970-20028989 MS.gene059960:intron 40.0%
! ACTTTTCAGCGAACATGGTA+AGG + chr8.1:20028695-20028714 MS.gene059960:CDS 40.0%
! TAACATACCATGCGTTGGTA+TGG + chr8.1:20028868-20028887 MS.gene059960:intron 40.0%
!! CTATGTTGGTAACTTGCCAT+GGG + chr8.1:20028647-20028666 MS.gene059960:CDS 40.0%
!! CTCAGCTTTTTGAGCAATCT+GGG + chr8.1:20027150-20027169 MS.gene059960:CDS 40.0%
!! GATTTGGTGTAGAAGAGTGA+AGG - chr8.1:20026798-20026817 None:intergenic 40.0%
!! TCTATGTTGGTAACTTGCCA+TGG + chr8.1:20028646-20028665 MS.gene059960:CDS 40.0%
!!! CATGTTTTGTTTCAGTTGGC+GGG - chr8.1:20027852-20027871 None:intergenic 40.0%
AGAATCAAGCGGATGCTACA+TGG + chr8.1:20027009-20027028 MS.gene059960:CDS 45.0%
CAACAGGAAGAGAAGGAAGA+TGG + chr8.1:20026975-20026994 MS.gene059960:CDS 45.0%
CTAGAATTGTCAACGTCCCA+TGG - chr8.1:20028666-20028685 None:intergenic 45.0%
GAATCAAGCGGATGCTACAT+GGG + chr8.1:20027010-20027029 MS.gene059960:CDS 45.0%
GAGTGAATGTTGCTGAGGAA+AGG + chr8.1:20029004-20029023 MS.gene059960:CDS 45.0%
GCAGCTAGCAAATGCAACTT+AGG - chr8.1:20027803-20027822 None:intergenic 45.0%
TCCGGGTTAAGAGTCTATGT+TGG + chr8.1:20028633-20028652 MS.gene059960:CDS 45.0%
TGCTACATGGGAGAATCAAG+CGG + chr8.1:20026998-20027017 MS.gene059960:CDS 45.0%
TGTTGCACAGACATCTGACT+GGG + chr8.1:20026950-20026969 MS.gene059960:CDS 45.0%
TTGTTGCACAGACATCTGAC+TGG + chr8.1:20026949-20026968 MS.gene059960:CDS 45.0%
! GAGCAACTTTTCAGCGAACA+TGG + chr8.1:20028690-20028709 MS.gene059960:CDS 45.0%
! GGACGTTGACAATTCTAGCT+TGG + chr8.1:20028668-20028687 MS.gene059960:CDS 45.0%
! TTTTAACGGTGGCCATGAGT+TGG + chr8.1:20028166-20028185 MS.gene059960:intron 45.0%
!! AGAAGGAAGATGGTGCTACA+TGG + chr8.1:20026985-20027004 MS.gene059960:CDS 45.0%
!! ATGGTAAGGTTGAGAGTGCT+CGG + chr8.1:20028709-20028728 MS.gene059960:CDS 45.0%
!! GAAGGAAGATGGTGCTACAT+GGG + chr8.1:20026986-20027005 MS.gene059960:CDS 45.0%
!! GCTCAGCTTTTTGAGCAATC+TGG + chr8.1:20027149-20027168 MS.gene059960:CDS 45.0%
!! TTTTGTTTCAGTTGGCGGGT+GGG - chr8.1:20027848-20027867 None:intergenic 45.0%
ACTGACAGAAGTCGTGGGTT+CGG + chr8.1:20027457-20027476 MS.gene059960:CDS 50.0%
CACCACGTGCCTTTAATTCC+GGG + chr8.1:20028616-20028635 MS.gene059960:CDS 50.0%
CCACCACGTGCCTTTAATTC+CGG + chr8.1:20028615-20028634 MS.gene059960:CDS 50.0%
GATGCCATTGCTGCTCTTGA+CGG + chr8.1:20028807-20028826 MS.gene059960:CDS 50.0%
GTCGTCTATGACAGAGAGAC+CGG + chr8.1:20028732-20028751 MS.gene059960:CDS 50.0%
GTTAATAAGGCCGCTCCAAG+AGG + chr8.1:20028573-20028592 MS.gene059960:CDS 50.0%
GTTGCAGAGCTTGGATGGAA+GGG + chr8.1:20028975-20028994 MS.gene059960:intron 50.0%
TGGGACTGTTGAGATTGCTG+AGG + chr8.1:20027169-20027188 MS.gene059960:CDS 50.0%
TGTTGCAGAGCTTGGATGGA+AGG + chr8.1:20028974-20028993 MS.gene059960:intron 50.0%
! AACCCGGAATTAAAGGCACG+TGG - chr8.1:20028621-20028640 None:intergenic 50.0%
! ACCATGCGTTGGTATGGCTT+GGG + chr8.1:20028874-20028893 MS.gene059960:intron 50.0%
! CGGAATTAAAGGCACGTGGT+GGG - chr8.1:20028617-20028636 None:intergenic 50.0%
! TACCATGCGTTGGTATGGCT+TGG + chr8.1:20028873-20028892 MS.gene059960:intron 50.0%
!! AGAATGGCGGGTTCTTCTCT+TGG - chr8.1:20026916-20026935 None:intergenic 50.0%
!! TGGTAAGGTTGAGAGTGCTC+GGG + chr8.1:20028710-20028729 MS.gene059960:CDS 50.0%
!!! GTTTTGTTTCAGTTGGCGGG+TGG - chr8.1:20027849-20027868 None:intergenic 50.0%
ACCCAAGCCATACCAACGCA+TGG - chr8.1:20028878-20028897 None:intergenic 55.0%
AGGGACACTGACAGAAGTCG+TGG + chr8.1:20027451-20027470 MS.gene059960:CDS 55.0%
ATGTTGCTGAGGAAAGGCCC+AGG + chr8.1:20029010-20029029 MS.gene059960:CDS 55.0%
CAAGCGGATGCTACATGGGT+TGG + chr8.1:20027014-20027033 MS.gene059960:CDS 55.0%
CATTGCTGCTCTTGACGGTC+AGG + chr8.1:20028812-20028831 MS.gene059960:CDS 55.0%
CTGACCGTCAAGAGCAGCAA+TGG - chr8.1:20028814-20028833 None:intergenic 55.0%
CTGGGCTCAACAGGAAGAGA+AGG + chr8.1:20026968-20026987 MS.gene059960:CDS 55.0%
GACATCTGACTGGGCTCAAC+AGG + chr8.1:20026959-20026978 MS.gene059960:CDS 55.0%
GCCAAAACCACGTGATCGAC+CGG - chr8.1:20028754-20028773 None:intergenic 55.0%
GGGACACTGACAGAAGTCGT+GGG + chr8.1:20027452-20027471 MS.gene059960:CDS 55.0%
! ACCGGTCGATCACGTGGTTT+TGG + chr8.1:20028750-20028769 MS.gene059960:CDS 55.0%
! CCGGAATTAAAGGCACGTGG+TGG - chr8.1:20028618-20028637 None:intergenic 55.0%
AGAGAGACCGGTCGATCACG+TGG + chr8.1:20028744-20028763 MS.gene059960:CDS 60.0%
CCGTGGTGCTCCTCTTGGAG+CGG - chr8.1:20028586-20028605 None:intergenic 65.0%
TCAGGCCGTGGTGCTCCTCT+TGG - chr8.1:20028591-20028610 None:intergenic 65.0%
!! CCGCTCCAAGAGGAGCACCA+CGG + chr8.1:20028583-20028602 MS.gene059960:CDS 65.0%
!! AAGGCACGTGGTGGGCGCTC+AGG - chr8.1:20028609-20028628 None:intergenic 70.0%
!!! CGTGGTGGGCGCTCAGGCCG+TGG - chr8.1:20028603-20028622 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 20026768 20029044 20026768 ID=MS.gene059960
chr8.1 mRNA 20026768 20029044 20026768 ID=MS.gene059960.t1;Parent=MS.gene059960
chr8.1 exon 20026768 20027190 20026768 ID=MS.gene059960.t1.exon1;Parent=MS.gene059960.t1
chr8.1 CDS 20026768 20027190 20026768 ID=cds.MS.gene059960.t1;Parent=MS.gene059960.t1
chr8.1 exon 20027439 20027540 20027439 ID=MS.gene059960.t1.exon2;Parent=MS.gene059960.t1
chr8.1 CDS 20027439 20027540 20027439 ID=cds.MS.gene059960.t1;Parent=MS.gene059960.t1
chr8.1 exon 20028549 20028833 20028549 ID=MS.gene059960.t1.exon3;Parent=MS.gene059960.t1
chr8.1 CDS 20028549 20028833 20028549 ID=cds.MS.gene059960.t1;Parent=MS.gene059960.t1
chr8.1 exon 20028982 20029044 20028982 ID=MS.gene059960.t1.exon4;Parent=MS.gene059960.t1
chr8.1 CDS 20028982 20029044 20028982 ID=cds.MS.gene059960.t1;Parent=MS.gene059960.t1
Gene Sequence

>MS.gene059960

ATGGCAGAATCATGCTTACTCTCTCAACCTTCACTCTTCTACACCAAATCCAAATCCCCATTCATCTCTAATTCCACCAAACCCTTCAAACTTCAAAACCCATCTTACAATTCTTCTAAATTTTCATCATCTGTCTCACTCGTTGCCAAGAGAAGAACCCGCCATTCTTCTTTCGTTACATTTGTTGCACAGACATCTGACTGGGCTCAACAGGAAGAGAAGGAAGATGGTGCTACATGGGAGAATCAAGCGGATGCTACATGGGTTGGTGAAACTGAAAGTAACGAGAGTGAAGTTGAAGTTGCCAGTTTTGAAGAACCTTCTGAAGATTTGAAGATTTTTGTTGGGAATTTGCCTTTTGATGTTGATAGTGAGAAATTGGCTCAGCTTTTTGAGCAATCTGGGACTGTTGAGATTGCTGAGGTCAGTTCTTATTTTTTTGAAAAAAATCTTATCTTTTTCCATTTCGTAATTGTTAGAGAATTAATTCATTGAACATGTTTGACAGAATAACATAGATTGTGTGTAATTGTTGTGTATTATTGATGTTATGTTGAATTATGGTAAAAAAAAACACTCTAAATTGTGGTTTTGATGCTGTTGTAGAGATTTGTTAAACTTATATTGTGTGAATTGCAATTTGTAATTTGACAACTGTTTTGTGATTTCAGGTAATTTATAATAGGGACACTGACAGAAGTCGTGGGTTCGGATTTGTCACAATGAGTACAGCTGAAGAAGTTGAGAGAGCTGTGAACAAATTCAGTGGCTTTGTAAGTTTTCCCCTTTATATCGTCTTACTGTGTGACTGAATCAGCGCTAATAAGTGTGAACAAATGTGTACATAATAGTTTGTCCATGATGTATGACTTCATTGATAAAACTTTGGTATTATAACCTTAAGGATAAAGTTCAAATTATCTCGGGGATTTTTGTAAAATGACAATTAGTAGTATCACTTTAACAAATGAGAAATGCTTCCTTAATTTTTTGAAAAACAAATAAATTTGTACATGGATGTCATATTGCTATCCTAAGTTGCATTTGCTAGCTGCAATGCGTGTTACTAACTTCACTCCCACCCGCCAACTGAAACAAAACATGAGAATTTTATCCTACACATACTTTGAAGTGGAAACTAAACATATCAATCTCAGAGTTTGACAGTTTTCTTTCATTTAGAGTTGTAGTCGTTTTCGATCTTGTTTCGTCATTTTACGAAAAAGAATGCCATTTACATTTATATTGGAGAATTACACAGCTTGTAACTGCCTCTAAATTGATGTTGTGCTGTATTCATGAAAAGGGAAAAGCATTTTTAGACATTTGAGGCTGGTCTTTGTACATTGTTCCTGTTCTAACAATGTTTTGCTCTAATCATAGTACAATGCTTCAAGATTTTAACGGTGGCCATGAGTTGGTAAAATGTTAAGACTAAAACTTGTAATTGGTAGTTTTTGCCTCTGGACATTTGATGATTAGAATACTTTGCTACTGTATCTATTATTATGCAATTTTATTTTTGTGAGTACATTTCTTTTTTTTTTTCAGAACAGAATAAATTAAAAAACCAAGTCTTTGAAATTTTGTTCCTATCACTTTGTTTGAAGATGGAATCCTTTCTGCATGTACAAAAGTGTTTTGTTTTTTTCTCTTTTTCTCAAACAAATGCAGAAAAGTAACATGAAGGAATCCATGTATATTATTAATATTTCTTTTCTAATTGTTCTTTATGTGGTTTGCGTAATTGTTTTGGATCTAATTCATCCTTTGTGTGACAGGAATTAGATGGAAGATTGTTGACGGTTAATAAGGCCGCTCCAAGAGGAGCACCACGGCCTGAGCGCCCACCACGTGCCTTTAATTCCGGGTTAAGAGTCTATGTTGGTAACTTGCCATGGGACGTTGACAATTCTAGCTTGGAGCAACTTTTCAGCGAACATGGTAAGGTTGAGAGTGCTCGGGTCGTCTATGACAGAGAGACCGGTCGATCACGTGGTTTTGGCTTTGTTACAATGAGCAATGAGGCTGAGATGAATGATGCCATTGCTGCTCTTGACGGTCAGGTATGACTGAAATAATTTCGTACTTGTTCATTCGTAACATACCATGCGTTGGTATGGCTTGGGTAAAGTTTTTGAGACAACGTTATGAAGAGGTGTATATGTTTGTATCATTACAAGGACTAACGTGCGATTAATTTTTATGTTGCAGAGCTTGGATGGAAGGGCAATTAGAGTGAATGTTGCTGAGGAAAGGCCCAGGCGCTCTTTCTGA

Protein sequence

>MS.gene059960.t1

MAESCLLSQPSLFYTKSKSPFISNSTKPFKLQNPSYNSSKFSSSVSLVAKRRTRHSSFVTFVAQTSDWAQQEEKEDGATWENQADATWVGETESNESEVEVASFEEPSEDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTAEEVERAVNKFSGFELDGRLLTVNKAAPRGAPRPERPPRAFNSGLRVYVGNLPWDVDNSSLEQLFSEHGKVESARVVYDRETGRSRGFGFVTMSNEAEMNDAIAALDGQSLDGRAIRVNVAEERPRRSF