Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57732.t1 | RHN64114.1 | 81.1 | 265 | 39 | 1 | 1 | 265 | 1 | 254 | 2.10E-42 | 183.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57732.t1 | Q9M8K5 | 84.1 | 82 | 13 | 0 | 1 | 82 | 1 | 82 | 1.6e-33 | 145.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57732.t1 | A0A072UQS4 | 81.1 | 265 | 39 | 1 | 1 | 265 | 1 | 254 | 1.5e-42 | 183.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051781 | MS.gene57732 | 0.838922 | 2.16E-57 | -1.69E-46 |
MS.gene051784 | MS.gene57732 | 0.822383 | 2.44E-53 | -1.69E-46 |
MS.gene051787 | MS.gene57732 | 0.833172 | 6.21E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57732.t1 | MTR_4g117220 | 84.053 | 533 | 51 | 9 | 1 | 520 | 1 | 512 | 7.17e-145 | 426 |
MS.gene57732.t1 | MTR_4g117140 | 76.740 | 546 | 82 | 9 | 1 | 520 | 1 | 527 | 4.26e-137 | 407 |
MS.gene57732.t1 | MTR_2g022250 | 53.818 | 550 | 168 | 21 | 1 | 520 | 1 | 494 | 3.29e-75 | 246 |
MS.gene57732.t1 | MTR_2g022240 | 49.817 | 546 | 180 | 23 | 1 | 520 | 1 | 478 | 2.82e-54 | 190 |
MS.gene57732.t1 | MTR_1g082650 | 59.559 | 136 | 50 | 3 | 1 | 131 | 1 | 136 | 1.60e-32 | 131 |
MS.gene57732.t1 | MTR_1g107565 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 9.35e-30 | 120 |
MS.gene57732.t1 | MTR_7g108560 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 3.09e-24 | 103 |
MS.gene57732.t1 | MTR_4g119820 | 41.216 | 148 | 61 | 2 | 7 | 128 | 71 | 218 | 9.32e-24 | 103 |
MS.gene57732.t1 | MTR_3g067750 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 4.63e-19 | 86.3 |
MS.gene57732.t1 | MTR_1g083310 | 57.333 | 75 | 31 | 1 | 4 | 77 | 9 | 83 | 6.44e-19 | 89.4 |
MS.gene57732.t1 | MTR_7g113110 | 56.061 | 66 | 29 | 0 | 9 | 74 | 32 | 97 | 1.88e-18 | 87.4 |
MS.gene57732.t1 | MTR_2g436830 | 60.000 | 70 | 28 | 0 | 5 | 74 | 10 | 79 | 2.03e-17 | 83.2 |
MS.gene57732.t1 | MTR_5g097550 | 59.375 | 64 | 25 | 1 | 12 | 74 | 15 | 78 | 1.19e-15 | 77.4 |
MS.gene57732.t1 | MTR_1g092670 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 3.15e-13 | 65.5 |
MS.gene57732.t1 | MTR_6g026890 | 40.625 | 64 | 38 | 0 | 14 | 77 | 20 | 83 | 1.05e-12 | 66.2 |
MS.gene57732.t1 | MTR_8g091420 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 1.12e-12 | 66.2 |
MS.gene57732.t1 | MTR_1g030630 | 45.902 | 61 | 33 | 0 | 14 | 74 | 29 | 89 | 2.54e-12 | 65.1 |
MS.gene57732.t1 | MTR_2g018790 | 46.575 | 73 | 38 | 1 | 8 | 79 | 6 | 78 | 3.47e-12 | 67.8 |
MS.gene57732.t1 | MTR_3g087770 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 3.58e-12 | 64.7 |
MS.gene57732.t1 | MTR_1g078090 | 38.356 | 73 | 45 | 0 | 7 | 79 | 50 | 122 | 4.42e-12 | 65.5 |
MS.gene57732.t1 | MTR_2g091235 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 7.13e-12 | 63.5 |
MS.gene57732.t1 | MTR_4g057765 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 1.31e-11 | 66.2 |
MS.gene57732.t1 | MTR_7g013660 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 2.09e-11 | 61.6 |
MS.gene57732.t1 | MTR_5g025150 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 2.32e-11 | 62.4 |
MS.gene57732.t1 | MTR_7g083060 | 33.654 | 104 | 62 | 3 | 2 | 98 | 16 | 119 | 2.74e-11 | 62.0 |
MS.gene57732.t1 | MTR_5g020960 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 7.71e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57732.t1 | AT3G06130 | 54.745 | 274 | 105 | 5 | 1 | 274 | 1 | 255 | 3.70e-47 | 167 |
MS.gene57732.t1 | AT3G06130 | 54.745 | 274 | 105 | 5 | 1 | 274 | 1 | 255 | 6.84e-46 | 167 |
MS.gene57732.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.37e-43 | 161 |
MS.gene57732.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.37e-43 | 161 |
MS.gene57732.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 7.77e-43 | 161 |
MS.gene57732.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 7.77e-43 | 161 |
MS.gene57732.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 7.77e-43 | 161 |
MS.gene57732.t1 | AT3G05220 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 2.03e-26 | 113 |
MS.gene57732.t1 | AT5G27690 | 54.639 | 97 | 39 | 1 | 5 | 101 | 25 | 116 | 3.34e-26 | 110 |
MS.gene57732.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 7.91e-26 | 108 |
MS.gene57732.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 2.43e-25 | 108 |
MS.gene57732.t1 | AT5G37860 | 54.412 | 68 | 31 | 0 | 9 | 76 | 9 | 76 | 2.97e-19 | 88.2 |
MS.gene57732.t1 | AT1G56210 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.32e-18 | 87.8 |
MS.gene57732.t1 | AT1G06330 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 3.25e-13 | 67.8 |
MS.gene57732.t1 | AT1G66240 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 4.95e-12 | 63.2 |
MS.gene57732.t1 | AT4G10465 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 5.66e-12 | 65.1 |
MS.gene57732.t1 | AT3G56891 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.54e-11 | 63.2 |
MS.gene57732.t1 | AT3G02960 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 2.68e-11 | 64.3 |
MS.gene57732.t1 | AT4G23882 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.42e-11 | 64.3 |
MS.gene57732.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 5.87e-11 | 60.5 |
MS.gene57732.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 5.87e-11 | 60.5 |
MS.gene57732.t1 | AT1G71050 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.27e-11 | 60.8 |
Find 164 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8.3:+8984243 | MS.gene57732:CDS |
CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8.3:+8984588 | MS.gene57732:CDS |
TGCTGCTGCTGTTGTTGATA+TGG | 0.227139 | 8.3:-8985437 | None:intergenic |
TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8.3:-8984641 | None:intergenic |
GGATTCCCCTGCATCATTTC+CGG | 0.253390 | 8.3:-8985416 | None:intergenic |
TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8.3:-8984449 | None:intergenic |
CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8.3:-8984647 | None:intergenic |
ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8.3:+8984288 | MS.gene57732:CDS |
TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8.3:-8984660 | None:intergenic |
CCCTGCATCATTTCCGGTCC+TGG | 0.305122 | 8.3:-8985410 | None:intergenic |
ACAACAACAGCAACAGTTAA+TGG | 0.305860 | 8.3:+8985460 | MS.gene57732:CDS |
AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8.3:-8984276 | None:intergenic |
TCAATCTCATCCTGGTAGTA+TGG | 0.312405 | 8.3:+8985265 | MS.gene57732:CDS |
TTGTATTTGTTGACCACCTT+TGG | 0.313268 | 8.3:-8984478 | None:intergenic |
CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8.3:-8984822 | None:intergenic |
TAAGGATCTGGAGGAGGATA+AGG | 0.339463 | 8.3:-8985599 | None:intergenic |
GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8.3:-8984648 | None:intergenic |
TTCTGGCCCGGGTGCTGATT+CGG | 0.342924 | 8.3:-8984624 | None:intergenic |
TCTGATTCGGGTTCTGGCCC+GGG | 0.343572 | 8.3:-8984635 | None:intergenic |
ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8.3:-8984365 | None:intergenic |
GGCGGAGGTGGAGGCGGTGG+TGG | 0.350490 | 8.3:+8985185 | MS.gene57732:CDS |
TTCTGATTCGGGTTCTGGCC+CGG | 0.355308 | 8.3:-8984636 | None:intergenic |
GGGTGGTGGAGGAAATAATA+TGG | 0.357181 | 8.3:+8985286 | MS.gene57732:CDS |
AATGGCGGTGGTGGCGGAAA+CGG | 0.358961 | 8.3:+8984909 | MS.gene57732:CDS |
TTACCACCCATTCGGTTCAT+AGG | 0.360924 | 8.3:-8985323 | None:intergenic |
CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8.3:-8984693 | None:intergenic |
GGTGGCGGAGGTGGAGGCGG+TGG | 0.373427 | 8.3:+8985182 | MS.gene57732:CDS |
ATGGCGGTGGTGGCGGAAAC+GGG | 0.382069 | 8.3:+8984910 | MS.gene57732:CDS |
TACTTTCAAGGTGGTGGTGG+TGG | 0.384334 | 8.3:+8985386 | MS.gene57732:CDS |
CCACCATAGCAGCACGTTGT+TGG | 0.393632 | 8.3:-8985499 | None:intergenic |
AACAAGAATGGAGGGAATAA+TGG | 0.397922 | 8.3:+8985110 | MS.gene57732:CDS |
CAGGGAAACATGCCGAGTTA+TGG | 0.402581 | 8.3:+8984307 | MS.gene57732:CDS |
CCAATTGGTGGCGGAGGTGG+AGG | 0.411942 | 8.3:+8985176 | MS.gene57732:CDS |
AATGTTCAGGCTATGAATAA+TGG | 0.423799 | 8.3:+8985209 | MS.gene57732:CDS |
GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8.3:-8984275 | None:intergenic |
TGTATTTGTTGACCACCTTT+GGG | 0.427960 | 8.3:-8984477 | None:intergenic |
AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8.3:+8984048 | MS.gene57732:CDS |
ATGATGGGTGGTGGAGGTGG+TGG | 0.432564 | 8.3:+8985242 | MS.gene57732:CDS |
AAGAAAGGTGGTGGTGGTGG+TGG | 0.432913 | 8.3:+8985005 | MS.gene57732:CDS |
CCTGTGCCGGTTCAAATTCA+TGG | 0.435135 | 8.3:+8984954 | MS.gene57732:CDS |
AAAATGATGGGTGGTGGAGG+TGG | 0.436665 | 8.3:+8985239 | MS.gene57732:CDS |
GGTAACATTCCTGCTGTTCA+AGG | 0.436866 | 8.3:+8985341 | MS.gene57732:CDS |
AGGCGGTGGTGGTAATGTTC+AGG | 0.438058 | 8.3:+8985196 | MS.gene57732:CDS |
GGTTACTTTCAAGGTGGTGG+TGG | 0.439749 | 8.3:+8985383 | MS.gene57732:CDS |
CCTCCACCTCCGCCACCAAT+TGG | 0.440018 | 8.3:-8985176 | None:intergenic |
TTCATGCCATGAATTTGAAC+CGG | 0.443413 | 8.3:-8984960 | None:intergenic |
GGAAAGAAAGGTGGTGGTGG+TGG | 0.445640 | 8.3:+8985002 | MS.gene57732:CDS |
ATTGGTGGCGGAGGTGGAGG+CGG | 0.453929 | 8.3:+8985179 | MS.gene57732:CDS |
ATACCAATTGGTGGCGGAGG+TGG | 0.457299 | 8.3:+8985173 | MS.gene57732:CDS |
CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8.3:+8984822 | MS.gene57732:CDS |
TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8.3:+8984770 | MS.gene57732:CDS |
AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8.3:+8984562 | MS.gene57732:CDS |
CGGTTCATAGGCATACTCAT+TGG | 0.463995 | 8.3:-8985311 | None:intergenic |
ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8.3:+8984875 | MS.gene57732:CDS |
AAGGATCTGGAGGAGGATAA+GGG | 0.466318 | 8.3:-8985598 | None:intergenic |
GGTCTACCGGCAGGCGGAGG+AGG | 0.468185 | 8.3:+8985362 | MS.gene57732:CDS |
AAAGCATGTGAGTAAGGATC+TGG | 0.469198 | 8.3:-8985611 | None:intergenic |
CATGGCATGAATGGTGGAAA+TGG | 0.469268 | 8.3:+8984972 | MS.gene57732:CDS |
TGGTGGTGGTGGTCCAGGAC+CGG | 0.469917 | 8.3:+8985397 | MS.gene57732:CDS |
TCCAGGACCGGAAATGATGC+AGG | 0.480211 | 8.3:+8985409 | MS.gene57732:CDS |
GGCGGAGGAGGTTACTTTCA+AGG | 0.482444 | 8.3:+8985374 | MS.gene57732:CDS |
GGCGGAAACGGGCAGAAACC+TGG | 0.484298 | 8.3:+8984921 | MS.gene57732:CDS |
AGTTGCTGCTGCTGCTGTTG+AGG | 0.488058 | 8.3:-8984519 | None:intergenic |
CAATCTCATCCTGGTAGTAT+GGG | 0.490190 | 8.3:+8985266 | MS.gene57732:CDS |
TCGCTGAAAGCATGTGAGTA+AGG | 0.494235 | 8.3:-8985617 | None:intergenic |
AAGGGTATGTCGATACCAAT+TGG | 0.495826 | 8.3:+8985161 | MS.gene57732:CDS |
TCCTGCTGTTCAAGGTCTAC+CGG | 0.501026 | 8.3:+8985349 | MS.gene57732:CDS |
GCCGGTAGACCTTGAACAGC+AGG | 0.503563 | 8.3:-8985350 | None:intergenic |
GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8.3:-8985545 | None:intergenic |
TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8.3:-8985593 | None:intergenic |
ATTGACAATGTCAAAGGTGG+TGG | 0.509050 | 8.3:+8984402 | MS.gene57732:CDS |
CATCCTGGTAGTATGGGTGG+TGG | 0.513520 | 8.3:+8985272 | MS.gene57732:CDS |
AATGGTGGTGGAAACAAGAA+TGG | 0.515647 | 8.3:+8985098 | MS.gene57732:CDS |
CCATGAATTTGAACCGGCAC+AGG | 0.516132 | 8.3:-8984954 | None:intergenic |
GGAGGTTACTTTCAAGGTGG+TGG | 0.516276 | 8.3:+8985380 | MS.gene57732:CDS |
GGTGGTGGAGGAAATAATAT+GGG | 0.517548 | 8.3:+8985287 | MS.gene57732:CDS |
AAGTAACCTCCTCCGCCTGC+CGG | 0.520732 | 8.3:-8985368 | None:intergenic |
GTAGTAATCAAAATAACGAT+GGG | 0.520911 | 8.3:+8985132 | MS.gene57732:CDS |
CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8.3:+8984654 | MS.gene57732:CDS |
GATGCCGCCGAATCAGCACC+CGG | 0.521854 | 8.3:+8984617 | MS.gene57732:CDS |
AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8.3:+8984441 | MS.gene57732:CDS |
GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8.3:+8984999 | MS.gene57732:CDS |
CCAACAACGTGCTGCTATGG+TGG | 0.525200 | 8.3:+8985499 | MS.gene57732:CDS |
CAGGAATGTTACCACCCATT+CGG | 0.525275 | 8.3:-8985331 | None:intergenic |
GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8.3:+8984843 | MS.gene57732:CDS |
GTTCAAATTCATGGCATGAA+TGG | 0.526661 | 8.3:+8984963 | MS.gene57732:CDS |
CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8.3:+8984561 | MS.gene57732:CDS |
CAAGGTCTACCGGCAGGCGG+AGG | 0.530336 | 8.3:+8985359 | MS.gene57732:CDS |
AACGGGCAGAAACCTGGTGG+TGG | 0.531908 | 8.3:+8984927 | MS.gene57732:CDS |
ATGTAATTCACCTCAGGAGG+TGG | 0.534211 | 8.3:-8985563 | None:intergenic |
AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8.3:+8984990 | MS.gene57732:CDS |
CCTGGTAGTATGGGTGGTGG+AGG | 0.540462 | 8.3:+8985275 | MS.gene57732:CDS |
GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8.3:+8984844 | MS.gene57732:CDS |
TCATTGGCTGCTGAAATCTC+TGG | 0.541514 | 8.3:-8985529 | None:intergenic |
GCTGTTCAAGGTCTACCGGC+AGG | 0.542942 | 8.3:+8985353 | MS.gene57732:CDS |
GAATCACATGACATTGCAGC+TGG | 0.546046 | 8.3:-8985651 | None:intergenic |
GGAGGAGGATAAGGGTAAGG+AGG | 0.547967 | 8.3:-8985590 | None:intergenic |
CCTCCACCACCCATACTACC+AGG | 0.550212 | 8.3:-8985275 | None:intergenic |
GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8.3:+8984930 | MS.gene57732:CDS |
TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8.3:+8984289 | MS.gene57732:CDS |
TCGATACCAATTGGTGGCGG+AGG | 0.554646 | 8.3:+8985170 | MS.gene57732:CDS |
TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8.3:+8984941 | MS.gene57732:CDS |
GAACCAACAACGTGCTGCTA+TGG | 0.559788 | 8.3:+8985496 | MS.gene57732:CDS |
ATGCAAATTGACAATGTCAA+AGG | 0.561214 | 8.3:+8984396 | MS.gene57732:CDS |
GGTGGTGGTCAATCTCATCC+TGG | 0.561328 | 8.3:+8985257 | MS.gene57732:CDS |
GGAGGGAATAATCAGAATCA+AGG | 0.567228 | 8.3:+8985032 | MS.gene57732:CDS |
GGATACATGTAATTCACCTC+AGG | 0.568572 | 8.3:-8985569 | None:intergenic |
GGTGGTGGAAACAAGAATGG+AGG | 0.570437 | 8.3:+8985101 | MS.gene57732:CDS |
CAAATTCATGGCATGAATGG+TGG | 0.570734 | 8.3:+8984966 | MS.gene57732:CDS |
CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8.3:-8984821 | None:intergenic |
TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8.3:-8984473 | None:intergenic |
GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8.3:-8984939 | None:intergenic |
GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8.3:+8984774 | MS.gene57732:CDS |
GGTAGTAATCAAAATAACGA+TGG | 0.583746 | 8.3:+8985131 | MS.gene57732:CDS |
GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8.3:+8984251 | MS.gene57732:CDS |
AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8.3:+8985540 | MS.gene57732:CDS |
ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8.3:+8984978 | MS.gene57732:CDS |
AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8.3:+8984244 | MS.gene57732:CDS |
GTGGTGGAAACAAGAATGGA+GGG | 0.595867 | 8.3:+8985102 | MS.gene57732:CDS |
CAACAAATACAACAACTACA+AGG | 0.597690 | 8.3:+8984489 | MS.gene57732:CDS |
AGGTCAGAATCAAAACCAGA+AGG | 0.597938 | 8.3:+8984434 | MS.gene57732:CDS |
TTTGGGAACACTCCATAACT+CGG | 0.598490 | 8.3:-8984319 | None:intergenic |
ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8.3:+8984683 | MS.gene57732:CDS |
GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8.3:+8984993 | MS.gene57732:CDS |
TGTGAGTAAGGATCTGGAGG+AGG | 0.603879 | 8.3:-8985605 | None:intergenic |
AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8.3:+8984465 | MS.gene57732:CDS |
AATAATCAGAATCAAGGTGG+AGG | 0.605707 | 8.3:+8985038 | MS.gene57732:CDS |
AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8.3:+8984996 | MS.gene57732:CDS |
TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8.3:-8984873 | None:intergenic |
TCTCATCCTGGTAGTATGGG+TGG | 0.611507 | 8.3:+8985269 | MS.gene57732:CDS |
AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8.3:+8984006 | MS.gene57732:CDS |
CCAGGACCGGAAATGATGCA+GGG | 0.618163 | 8.3:+8985410 | MS.gene57732:CDS |
ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8.3:-8984831 | None:intergenic |
ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8.3:+8984225 | MS.gene57732:CDS |
AGTATGCCTATGAACCGAAT+GGG | 0.622246 | 8.3:+8985317 | MS.gene57732:CDS |
GGTCAGAATCAAAACCAGAA+GGG | 0.626233 | 8.3:+8984435 | MS.gene57732:CDS |
TGGCCCGGGTGCTGATTCGG+CGG | 0.627521 | 8.3:-8984621 | None:intergenic |
ATGTCGATACCAATTGGTGG+CGG | 0.631785 | 8.3:+8985167 | MS.gene57732:CDS |
GTTCAAGGTCTACCGGCAGG+CGG | 0.633909 | 8.3:+8985356 | MS.gene57732:CDS |
GCATGTGAGTAAGGATCTGG+AGG | 0.633919 | 8.3:-8985608 | None:intergenic |
GGTATGTCGATACCAATTGG+TGG | 0.637679 | 8.3:+8985164 | MS.gene57732:CDS |
CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8.3:+8984879 | MS.gene57732:CDS |
TACATGTAATTCACCTCAGG+AGG | 0.640426 | 8.3:-8985566 | None:intergenic |
GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8.3:+8984230 | MS.gene57732:CDS |
CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8.3:+8984876 | MS.gene57732:CDS |
ATGCCGCCGAATCAGCACCC+GGG | 0.644621 | 8.3:+8984618 | MS.gene57732:CDS |
TAGTAATCAAAATAACGATG+GGG | 0.650397 | 8.3:+8985133 | MS.gene57732:CDS |
ATGCCTATGAACCGAATGGG+TGG | 0.650716 | 8.3:+8985320 | MS.gene57732:CDS |
GAGTATGCCTATGAACCGAA+TGG | 0.653536 | 8.3:+8985316 | MS.gene57732:CDS |
AGTAATCAAAATAACGATGG+GGG | 0.662461 | 8.3:+8985134 | MS.gene57732:CDS |
AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8.3:+8984981 | MS.gene57732:CDS |
CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8.3:+8984226 | MS.gene57732:CDS |
CAGGACCGGAAATGATGCAG+GGG | 0.670762 | 8.3:+8985411 | MS.gene57732:CDS |
ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8.3:-8984820 | None:intergenic |
CAAATTGACAATGTCAAAGG+TGG | 0.676115 | 8.3:+8984399 | MS.gene57732:CDS |
AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8.3:+8984414 | MS.gene57732:CDS |
GGGAATAATCAGAATCAAGG+TGG | 0.678494 | 8.3:+8985035 | MS.gene57732:CDS |
CAGAATCAAAACCAGAAGGG+TGG | 0.682186 | 8.3:+8984438 | MS.gene57732:CDS |
GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8.3:+8984462 | MS.gene57732:CDS |
GTATGCAAGGCCACCTCCTG+AGG | 0.686248 | 8.3:+8985553 | MS.gene57732:CDS |
GGAAACGGGCAGAAACCTGG+TGG | 0.691525 | 8.3:+8984924 | MS.gene57732:CDS |
TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8.3:-8984819 | None:intergenic |
GTGGTGGAGGAAATAATATG+GGG | 0.726893 | 8.3:+8985288 | MS.gene57732:CDS |
GGAGGAGGTTACTTTCAAGG+TGG | 0.764262 | 8.3:+8985377 | MS.gene57732:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTTTGATTATTGTT+TGG | - | chr8.3:8984345-8984364 | None:intergenic | 10.0% |
!! | AAAATCTTACAGAAAATTGA+TGG | + | chr8.3:8984048-8984067 | MS.gene57732:CDS | 20.0% |
!! | AACATTTACTCTCAAAATTA+AGG | - | chr8.3:8984160-8984179 | None:intergenic | 20.0% |
!! | ATAATTGAAAGCTATGATTA+AGG | - | chr8.3:8984114-8984133 | None:intergenic | 20.0% |
!! | GCAAAAAAAATAAAGAAAGA+TGG | - | chr8.3:8983881-8983900 | None:intergenic | 20.0% |
!!! | AATGGATTTCAAAAAATGAT+GGG | + | chr8.3:8985227-8985246 | MS.gene57732:CDS | 20.0% |
!!! | ATTTTGATTATTGTTTGGTT+TGG | - | chr8.3:8984340-8984359 | None:intergenic | 20.0% |
!!! | TAATGGATTTCAAAAAATGA+TGG | + | chr8.3:8985226-8985245 | MS.gene57732:CDS | 20.0% |
!!! | TTTTGATTATTGTTTGGTTT+GGG | - | chr8.3:8984339-8984358 | None:intergenic | 20.0% |
! | GTAGTAATCAAAATAACGAT+GGG | + | chr8.3:8985132-8985151 | MS.gene57732:CDS | 25.0% |
! | TAGTAATCAAAATAACGATG+GGG | + | chr8.3:8985133-8985152 | MS.gene57732:CDS | 25.0% |
!! | TCAAAATTAAGGTTCTGTTT+TGG | - | chr8.3:8984149-8984168 | None:intergenic | 25.0% |
!!! | AGAAGAATTTTTGAAGATAC+AGG | + | chr8.3:8983834-8983853 | MS.gene57732:CDS | 25.0% |
!!! | TGATTTTAGTGATGATGAAA+TGG | + | chr8.3:8984707-8984726 | MS.gene57732:CDS | 25.0% |
AACAACTTCAACAGATGAAA+GGG | + | chr8.3:8984562-8984581 | MS.gene57732:CDS | 30.0% | |
AATGTTCAGGCTATGAATAA+TGG | + | chr8.3:8985209-8985228 | MS.gene57732:CDS | 30.0% | |
AGTAATCAAAATAACGATGG+GGG | + | chr8.3:8985134-8985153 | MS.gene57732:CDS | 30.0% | |
ATGCAAATTGACAATGTCAA+AGG | + | chr8.3:8984396-8984415 | MS.gene57732:CDS | 30.0% | |
ATGCCAGAAGCTAAAAATAA+TGG | + | chr8.3:8985080-8985099 | MS.gene57732:CDS | 30.0% | |
CAACAAATACAACAACTACA+AGG | + | chr8.3:8984489-8984508 | MS.gene57732:CDS | 30.0% | |
GGTAGTAATCAAAATAACGA+TGG | + | chr8.3:8985131-8985150 | MS.gene57732:CDS | 30.0% | |
TTAACACCTTTAGCATCTTT+AGG | - | chr8.3:8984663-8984682 | None:intergenic | 30.0% | |
TTCTGCATACACAAATAACA+AGG | - | chr8.3:8983976-8983995 | None:intergenic | 30.0% | |
! | CAAGATCTAGCTCAATTTAA+AGG | + | chr8.3:8984588-8984607 | MS.gene57732:CDS | 30.0% |
!! | TGATGAGTTTGATGATGAAA+TGG | + | chr8.3:8984770-8984789 | MS.gene57732:CDS | 30.0% |
!! | TGTGTTGATTAATGAATGAC+AGG | + | chr8.3:8984192-8984211 | MS.gene57732:intron | 30.0% |
AAAGTGAACATACACTGTGA+TGG | + | chr8.3:8984006-8984025 | MS.gene57732:CDS | 35.0% | |
AACAAGAATGGAGGGAATAA+TGG | + | chr8.3:8985110-8985129 | MS.gene57732:CDS | 35.0% | |
AAGAAAGATGGAGAATGTGA+TGG | - | chr8.3:8983869-8983888 | None:intergenic | 35.0% | |
AATAATCAGAATCAAGGTGG+AGG | + | chr8.3:8985038-8985057 | MS.gene57732:CDS | 35.0% | |
ACAACAACAGCAACAGTTAA+TGG | + | chr8.3:8985460-8985479 | MS.gene57732:CDS | 35.0% | |
ACTGATTAACAACGTTGTTC+TGG | - | chr8.3:8984368-8984387 | None:intergenic | 35.0% | |
AGAAAGATGGAGAATGTGAT+GGG | - | chr8.3:8983868-8983887 | None:intergenic | 35.0% | |
AGCTTCTTGATGAGAACATT+TGG | - | chr8.3:8984279-8984298 | None:intergenic | 35.0% | |
ATCAAGAAGCTTGCAAAATC+AGG | + | chr8.3:8984288-8984307 | MS.gene57732:CDS | 35.0% | |
CAAATTGACAATGTCAAAGG+TGG | + | chr8.3:8984399-8984418 | MS.gene57732:CDS | 35.0% | |
CAACAACTTCAACAGATGAA+AGG | + | chr8.3:8984561-8984580 | MS.gene57732:CDS | 35.0% | |
CAGAATCCTAAAGATGCTAA+AGG | + | chr8.3:8984654-8984673 | MS.gene57732:CDS | 35.0% | |
CCAGAAGCTAAAAATAATGG+TGG | + | chr8.3:8985083-8985102 | MS.gene57732:CDS | 35.0% | |
CTAAAATCATCCTCATCTTC+AGG | - | chr8.3:8984696-8984715 | None:intergenic | 35.0% | |
GAAGCTAAAAATAATGGTGG+TGG | + | chr8.3:8985086-8985105 | MS.gene57732:CDS | 35.0% | |
GCTTCTTGATGAGAACATTT+GGG | - | chr8.3:8984278-8984297 | None:intergenic | 35.0% | |
GGAGGTAACAAAAATAATGG+TGG | + | chr8.3:8985056-8985075 | MS.gene57732:CDS | 35.0% | |
GGTGGAGGTAACAAAAATAA+TGG | + | chr8.3:8985053-8985072 | MS.gene57732:CDS | 35.0% | |
GTTCAAATTCATGGCATGAA+TGG | + | chr8.3:8984963-8984982 | MS.gene57732:CDS | 35.0% | |
TCAAGAAGCTTGCAAAATCA+GGG | + | chr8.3:8984289-8984308 | MS.gene57732:CDS | 35.0% | |
TTCATGCCATGAATTTGAAC+CGG | - | chr8.3:8984963-8984982 | None:intergenic | 35.0% | |
! | ATGAAGGGTGGCAATTTTAA+TGG | + | chr8.3:8984891-8984910 | MS.gene57732:CDS | 35.0% |
! | GGATTTCAAAAAATGATGGG+TGG | + | chr8.3:8985230-8985249 | MS.gene57732:CDS | 35.0% |
! | TGTATTTGTTGACCACCTTT+GGG | - | chr8.3:8984480-8984499 | None:intergenic | 35.0% |
! | TTGTATTTGTTGACCACCTT+TGG | - | chr8.3:8984481-8984500 | None:intergenic | 35.0% |
!! | CATCTTTAGGATTCTGATTC+GGG | - | chr8.3:8984650-8984669 | None:intergenic | 35.0% |
!! | GAGTTTGATGATGAAATGGT+TGG | + | chr8.3:8984774-8984793 | MS.gene57732:CDS | 35.0% |
!! | GCATCTTTAGGATTCTGATT+CGG | - | chr8.3:8984651-8984670 | None:intergenic | 35.0% |
!! | TTTCAAAAAATGATGGGTGG+TGG | + | chr8.3:8985233-8985252 | MS.gene57732:CDS | 35.0% |
!!! | CCACCATTATTTTTAGCTTC+TGG | - | chr8.3:8985086-8985105 | None:intergenic | 35.0% |
AAAGCATGTGAGTAAGGATC+TGG | - | chr8.3:8985614-8985633 | None:intergenic | 40.0% | |
AAATAACGATGGGGGTAAGA+AGG | + | chr8.3:8985142-8985161 | MS.gene57732:CDS | 40.0% | |
AACAATAACCAACCCAAAGG+TGG | + | chr8.3:8984465-8984484 | MS.gene57732:CDS | 40.0% | |
AATAACGATGGGGGTAAGAA+GGG | + | chr8.3:8985143-8985162 | MS.gene57732:CDS | 40.0% | |
AATGGCAATGGAGGAAAGAA+AGG | + | chr8.3:8984990-8985009 | MS.gene57732:CDS | 40.0% | |
ACAGCTTATGAGTGCTATGA+AGG | + | chr8.3:8984875-8984894 | MS.gene57732:CDS | 40.0% | |
ACTGAGATAGATGCAGAACA+AGG | + | chr8.3:8984225-8984244 | MS.gene57732:CDS | 40.0% | |
AGGTCAGAATCAAAACCAGA+AGG | + | chr8.3:8984434-8984453 | MS.gene57732:CDS | 40.0% | |
AGTATGCCTATGAACCGAAT+GGG | + | chr8.3:8985317-8985336 | MS.gene57732:CDS | 40.0% | |
ATTGACAATGTCAAAGGTGG+TGG | + | chr8.3:8984402-8984421 | MS.gene57732:CDS | 40.0% | |
ATTTGATGTGCCTGAAGATG+AGG | + | chr8.3:8984683-8984702 | MS.gene57732:CDS | 40.0% | |
CAAATTCATGGCATGAATGG+TGG | + | chr8.3:8984966-8984985 | MS.gene57732:CDS | 40.0% | |
CAATCTCATCCTGGTAGTAT+GGG | + | chr8.3:8985266-8985285 | MS.gene57732:CDS | 40.0% | |
CAGCTTATGAGTGCTATGAA+GGG | + | chr8.3:8984876-8984895 | MS.gene57732:CDS | 40.0% | |
CTGAGATAGATGCAGAACAA+GGG | + | chr8.3:8984226-8984245 | MS.gene57732:CDS | 40.0% | |
GAAGGGGGTTTCATCTTATT+AGG | - | chr8.3:8984807-8984826 | None:intergenic | 40.0% | |
GGAAACAATAACCAACCCAA+AGG | + | chr8.3:8984462-8984481 | MS.gene57732:CDS | 40.0% | |
GGAGGGAATAATCAGAATCA+AGG | + | chr8.3:8985032-8985051 | MS.gene57732:CDS | 40.0% | |
GGATACATGTAATTCACCTC+AGG | - | chr8.3:8985572-8985591 | None:intergenic | 40.0% | |
GGGAATAATCAGAATCAAGG+TGG | + | chr8.3:8985035-8985054 | MS.gene57732:CDS | 40.0% | |
GGTCAGAATCAAAACCAGAA+GGG | + | chr8.3:8984435-8984454 | MS.gene57732:CDS | 40.0% | |
GTGCTCACATGATGTTGAAT+GGG | + | chr8.3:8984844-8984863 | MS.gene57732:CDS | 40.0% | |
TACATGTAATTCACCTCAGG+AGG | - | chr8.3:8985569-8985588 | None:intergenic | 40.0% | |
TCAATCTCATCCTGGTAGTA+TGG | + | chr8.3:8985265-8985284 | MS.gene57732:CDS | 40.0% | |
TTCATAGCACTCATAAGCTG+TGG | - | chr8.3:8984876-8984895 | None:intergenic | 40.0% | |
TTTGGGAACACTCCATAACT+CGG | - | chr8.3:8984322-8984341 | None:intergenic | 40.0% | |
! | AAGGGTATGTCGATACCAAT+TGG | + | chr8.3:8985161-8985180 | MS.gene57732:CDS | 40.0% |
! | ATGAATGGTGGAAATGGCAA+TGG | + | chr8.3:8984978-8984997 | MS.gene57732:CDS | 40.0% |
! | GTGGTGGAGGAAATAATATG+GGG | + | chr8.3:8985288-8985307 | MS.gene57732:CDS | 40.0% |
!! | AAAGGTGGTGGAAACAACAA+AGG | + | chr8.3:8984414-8984433 | MS.gene57732:CDS | 40.0% |
!! | AAGGGTGGCAATTTTAATGG+CGG | + | chr8.3:8984894-8984913 | MS.gene57732:CDS | 40.0% |
!! | AATGGTGGTGGAAACAAGAA+TGG | + | chr8.3:8985098-8985117 | MS.gene57732:CDS | 40.0% |
!! | GGTGGTGGAGGAAATAATAT+GGG | + | chr8.3:8985287-8985306 | MS.gene57732:CDS | 40.0% |
AAACCCCCTTCTATGCCTAT+GGG | + | chr8.3:8984816-8984835 | MS.gene57732:CDS | 45.0% | |
AAGGATCTGGAGGAGGATAA+GGG | - | chr8.3:8985601-8985620 | None:intergenic | 45.0% | |
AAGGGAAGGTCACAGTTTCA+GGG | + | chr8.3:8984244-8984263 | MS.gene57732:CDS | 45.0% | |
AATCAAAACCAGAAGGGTGG+TGG | + | chr8.3:8984441-8984460 | MS.gene57732:CDS | 45.0% | |
AATGGAGGAAAGAAAGGTGG+TGG | + | chr8.3:8984996-8985015 | MS.gene57732:CDS | 45.0% | |
AGCAGCCAATGATGTATGCA+AGG | + | chr8.3:8985540-8985559 | MS.gene57732:CDS | 45.0% | |
ATGTAATTCACCTCAGGAGG+TGG | - | chr8.3:8985566-8985585 | None:intergenic | 45.0% | |
ATGTCGATACCAATTGGTGG+CGG | + | chr8.3:8985167-8985186 | MS.gene57732:CDS | 45.0% | |
ATTCCCCATAGGCATAGAAG+GGG | - | chr8.3:8984823-8984842 | None:intergenic | 45.0% | |
CAGAATCAAAACCAGAAGGG+TGG | + | chr8.3:8984438-8984457 | MS.gene57732:CDS | 45.0% | |
CAGGAATGTTACCACCCATT+CGG | - | chr8.3:8985334-8985353 | None:intergenic | 45.0% | |
CATTCCCCATAGGCATAGAA+GGG | - | chr8.3:8984824-8984843 | None:intergenic | 45.0% | |
CGGTTCATAGGCATACTCAT+TGG | - | chr8.3:8985314-8985333 | None:intergenic | 45.0% | |
CTTATGAGTGCTATGAAGGG+TGG | + | chr8.3:8984879-8984898 | MS.gene57732:CDS | 45.0% | |
GAGTATGCCTATGAACCGAA+TGG | + | chr8.3:8985316-8985335 | MS.gene57732:CDS | 45.0% | |
GATAGATGCAGAACAAGGGA+AGG | + | chr8.3:8984230-8984249 | MS.gene57732:CDS | 45.0% | |
GGGGGTTTCATCTTATTAGG+TGG | - | chr8.3:8984804-8984823 | None:intergenic | 45.0% | |
GGTAACATTCCTGCTGTTCA+AGG | + | chr8.3:8985341-8985360 | MS.gene57732:CDS | 45.0% | |
GGTATGTCGATACCAATTGG+TGG | + | chr8.3:8985164-8985183 | MS.gene57732:CDS | 45.0% | |
GGTGCTCACATGATGTTGAA+TGG | + | chr8.3:8984843-8984862 | MS.gene57732:CDS | 45.0% | |
TAAGGATCTGGAGGAGGATA+AGG | - | chr8.3:8985602-8985621 | None:intergenic | 45.0% | |
TATTGTTTCCACCACCCTTC+TGG | - | chr8.3:8984452-8984471 | None:intergenic | 45.0% | |
TGCTGCTGCTGTTGTTGATA+TGG | - | chr8.3:8985440-8985459 | None:intergenic | 45.0% | |
TTACCACCCATTCGGTTCAT+AGG | - | chr8.3:8985326-8985345 | None:intergenic | 45.0% | |
TTTGTTGACCACCTTTGGGT+TGG | - | chr8.3:8984476-8984495 | None:intergenic | 45.0% | |
! | AATGGTGGAAATGGCAATGG+AGG | + | chr8.3:8984981-8985000 | MS.gene57732:CDS | 45.0% |
! | CATGGCATGAATGGTGGAAA+TGG | + | chr8.3:8984972-8984991 | MS.gene57732:CDS | 45.0% |
! | GTGGTGGAAACAAGAATGGA+GGG | + | chr8.3:8985102-8985121 | MS.gene57732:CDS | 45.0% |
! | TCATTGGCTGCTGAAATCTC+TGG | - | chr8.3:8985532-8985551 | None:intergenic | 45.0% |
! | TCGCTGAAAGCATGTGAGTA+AGG | - | chr8.3:8985620-8985639 | None:intergenic | 45.0% |
!! | AATTTTAATGGCGGTGGTGG+CGG | + | chr8.3:8984903-8984922 | MS.gene57732:CDS | 45.0% |
!! | CAAAAAATGATGGGTGGTGG+AGG | + | chr8.3:8985236-8985255 | MS.gene57732:CDS | 45.0% |
!! | GGGTGGTGGAGGAAATAATA+TGG | + | chr8.3:8985286-8985305 | MS.gene57732:CDS | 45.0% |
!! | TAGGATTCTGATTCGGGTTC+TGG | - | chr8.3:8984644-8984663 | None:intergenic | 45.0% |
AACCCCCTTCTATGCCTATG+GGG | + | chr8.3:8984817-8984836 | MS.gene57732:CDS | 50.0% | |
ATGCCTATGAACCGAATGGG+TGG | + | chr8.3:8985320-8985339 | MS.gene57732:CDS | 50.0% | |
ATGTGAGCACCATTCCCCAT+AGG | - | chr8.3:8984834-8984853 | None:intergenic | 50.0% | |
CAAGGGAAGGTCACAGTTTC+AGG | + | chr8.3:8984243-8984262 | MS.gene57732:CDS | 50.0% | |
CAGGGAAACATGCCGAGTTA+TGG | + | chr8.3:8984307-8984326 | MS.gene57732:CDS | 50.0% | |
CCATGAATTTGAACCGGCAC+AGG | - | chr8.3:8984957-8984976 | None:intergenic | 50.0% | |
CCATTCCCCATAGGCATAGA+AGG | - | chr8.3:8984825-8984844 | None:intergenic | 50.0% | |
CCTTCTATGCCTATGGGGAA+TGG | + | chr8.3:8984822-8984841 | MS.gene57732:CDS | 50.0% | |
GAAACCCCCTTCTATGCCTA+TGG | + | chr8.3:8984815-8984834 | MS.gene57732:CDS | 50.0% | |
GCATGTGAGTAAGGATCTGG+AGG | - | chr8.3:8985611-8985630 | None:intergenic | 50.0% | |
GGATTCCCCTGCATCATTTC+CGG | - | chr8.3:8985419-8985438 | None:intergenic | 50.0% | |
GGCAATGGAGGAAAGAAAGG+TGG | + | chr8.3:8984993-8985012 | MS.gene57732:CDS | 50.0% | |
GGTCACAGTTTCAGGGAATG+TGG | + | chr8.3:8984251-8984270 | MS.gene57732:CDS | 50.0% | |
TCCTGCTGTTCAAGGTCTAC+CGG | + | chr8.3:8985349-8985368 | MS.gene57732:CDS | 50.0% | |
TCTCATCCTGGTAGTATGGG+TGG | + | chr8.3:8985269-8985288 | MS.gene57732:CDS | 50.0% | |
TCTGGAGGAGGATAAGGGTA+AGG | - | chr8.3:8985596-8985615 | None:intergenic | 50.0% | |
TGTGAGTAAGGATCTGGAGG+AGG | - | chr8.3:8985608-8985627 | None:intergenic | 50.0% | |
TTCCCCATAGGCATAGAAGG+GGG | - | chr8.3:8984822-8984841 | None:intergenic | 50.0% | |
! | GAACCAACAACGTGCTGCTA+TGG | + | chr8.3:8985496-8985515 | MS.gene57732:CDS | 50.0% |
! | GGAGGAGGTTACTTTCAAGG+TGG | + | chr8.3:8985377-8985396 | MS.gene57732:CDS | 50.0% |
! | GGAGGTTACTTTCAAGGTGG+TGG | + | chr8.3:8985380-8985399 | MS.gene57732:CDS | 50.0% |
! | GGTGGCCTTGCATACATCAT+TGG | - | chr8.3:8985548-8985567 | None:intergenic | 50.0% |
! | GGTTACTTTCAAGGTGGTGG+TGG | + | chr8.3:8985383-8985402 | MS.gene57732:CDS | 50.0% |
!! | AAAATGATGGGTGGTGGAGG+TGG | + | chr8.3:8985239-8985258 | MS.gene57732:CDS | 50.0% |
!! | CCTGTGCCGGTTCAAATTCA+TGG | + | chr8.3:8984954-8984973 | MS.gene57732:CDS | 50.0% |
!! | GGCAATTTTAATGGCGGTGG+TGG | + | chr8.3:8984900-8984919 | MS.gene57732:CDS | 50.0% |
!! | GGTGGCAATTTTAATGGCGG+TGG | + | chr8.3:8984897-8984916 | MS.gene57732:CDS | 50.0% |
!! | GGTGGTGGAAACAAGAATGG+AGG | + | chr8.3:8985101-8985120 | MS.gene57732:CDS | 50.0% |
!! | TACTTTCAAGGTGGTGGTGG+TGG | + | chr8.3:8985386-8985405 | MS.gene57732:CDS | 50.0% |
AGTTGCTGCTGCTGCTGTTG+AGG | - | chr8.3:8984522-8984541 | None:intergenic | 55.0% | |
CAGGACCGGAAATGATGCAG+GGG | + | chr8.3:8985411-8985430 | MS.gene57732:CDS | 55.0% | |
CATCCTGGTAGTATGGGTGG+TGG | + | chr8.3:8985272-8985291 | MS.gene57732:CDS | 55.0% | |
CCACCATAGCAGCACGTTGT+TGG | - | chr8.3:8985502-8985521 | None:intergenic | 55.0% | |
CCAGGACCGGAAATGATGCA+GGG | + | chr8.3:8985410-8985429 | MS.gene57732:CDS | 55.0% | |
GGAGGAGGATAAGGGTAAGG+AGG | - | chr8.3:8985593-8985612 | None:intergenic | 55.0% | |
TCCAGGACCGGAAATGATGC+AGG | + | chr8.3:8985409-8985428 | MS.gene57732:CDS | 55.0% | |
! | AGGCGGTGGTGGTAATGTTC+AGG | + | chr8.3:8985196-8985215 | MS.gene57732:CDS | 55.0% |
! | CCAACAACGTGCTGCTATGG+TGG | + | chr8.3:8985499-8985518 | MS.gene57732:CDS | 55.0% |
! | GGAGGAAAGAAAGGTGGTGG+TGG | + | chr8.3:8984999-8985018 | MS.gene57732:CDS | 55.0% |
! | GGCGGAGGAGGTTACTTTCA+AGG | + | chr8.3:8985374-8985393 | MS.gene57732:CDS | 55.0% |
! | GGTGGTGGTCAATCTCATCC+TGG | + | chr8.3:8985257-8985276 | MS.gene57732:CDS | 55.0% |
!! | AAGAAAGGTGGTGGTGGTGG+TGG | + | chr8.3:8985005-8985024 | MS.gene57732:CDS | 55.0% |
!! | ATACCAATTGGTGGCGGAGG+TGG | + | chr8.3:8985173-8985192 | MS.gene57732:CDS | 55.0% |
!! | GGAAAGAAAGGTGGTGGTGG+TGG | + | chr8.3:8985002-8985021 | MS.gene57732:CDS | 55.0% |
!! | TCGATACCAATTGGTGGCGG+AGG | + | chr8.3:8985170-8985189 | MS.gene57732:CDS | 55.0% |
!! | TTCTGATTCGGGTTCTGGCC+CGG | - | chr8.3:8984639-8984658 | None:intergenic | 55.0% |
AACGGGCAGAAACCTGGTGG+TGG | + | chr8.3:8984927-8984946 | MS.gene57732:CDS | 60.0% | |
AAGTAACCTCCTCCGCCTGC+CGG | - | chr8.3:8985371-8985390 | None:intergenic | 60.0% | |
CCCTGCATCATTTCCGGTCC+TGG | - | chr8.3:8985413-8985432 | None:intergenic | 60.0% | |
CCTCCACCACCCATACTACC+AGG | - | chr8.3:8985278-8985297 | None:intergenic | 60.0% | |
GCCGGTAGACCTTGAACAGC+AGG | - | chr8.3:8985353-8985372 | None:intergenic | 60.0% | |
GCTGTTCAAGGTCTACCGGC+AGG | + | chr8.3:8985353-8985372 | MS.gene57732:CDS | 60.0% | |
GGAAACGGGCAGAAACCTGG+TGG | + | chr8.3:8984924-8984943 | MS.gene57732:CDS | 60.0% | |
GTATGCAAGGCCACCTCCTG+AGG | + | chr8.3:8985553-8985572 | MS.gene57732:CDS | 60.0% | |
GTTCAAGGTCTACCGGCAGG+CGG | + | chr8.3:8985356-8985375 | MS.gene57732:CDS | 60.0% | |
! | CCTGGTAGTATGGGTGGTGG+AGG | + | chr8.3:8985275-8985294 | MS.gene57732:CDS | 60.0% |
!! | AAAGGTGGTGGTGGTGGTGG+TGG | + | chr8.3:8985008-8985027 | MS.gene57732:CDS | 60.0% |
!! | AATGGCGGTGGTGGCGGAAA+CGG | + | chr8.3:8984909-8984928 | MS.gene57732:CDS | 60.0% |
!! | ATGATGGGTGGTGGAGGTGG+TGG | + | chr8.3:8985242-8985261 | MS.gene57732:CDS | 60.0% |
!! | TCTGATTCGGGTTCTGGCCC+GGG | - | chr8.3:8984638-8984657 | None:intergenic | 60.0% |
!! | TTCTGGCCCGGGTGCTGATT+CGG | - | chr8.3:8984627-8984646 | None:intergenic | 60.0% |
ATGCCGCCGAATCAGCACCC+GGG | + | chr8.3:8984618-8984637 | MS.gene57732:CDS | 65.0% | |
CCTCCACCTCCGCCACCAAT+TGG | - | chr8.3:8985179-8985198 | None:intergenic | 65.0% | |
GATGCCGCCGAATCAGCACC+CGG | + | chr8.3:8984617-8984636 | MS.gene57732:CDS | 65.0% | |
GGCGGAAACGGGCAGAAACC+TGG | + | chr8.3:8984921-8984940 | MS.gene57732:CDS | 65.0% | |
!! | ATGGCGGTGGTGGCGGAAAC+GGG | + | chr8.3:8984910-8984929 | MS.gene57732:CDS | 65.0% |
!! | ATTGGTGGCGGAGGTGGAGG+CGG | + | chr8.3:8985179-8985198 | MS.gene57732:CDS | 65.0% |
!! | CAAGGTGGTGGTGGTGGTCC+AGG | + | chr8.3:8985392-8985411 | MS.gene57732:CDS | 65.0% |
!! | CCAATTGGTGGCGGAGGTGG+AGG | + | chr8.3:8985176-8985195 | MS.gene57732:CDS | 65.0% |
!! | GGGCAGAAACCTGGTGGTGG+AGG | + | chr8.3:8984930-8984949 | MS.gene57732:CDS | 65.0% |
!! | GTGGTGGTGGTGGTGGTGGA+GGG | + | chr8.3:8985015-8985034 | MS.gene57732:CDS | 65.0% |
!! | TGGTGGTGGAGGACCTGTGC+CGG | + | chr8.3:8984941-8984960 | MS.gene57732:CDS | 65.0% |
!! | TGGTGGTGGTGGTCCAGGAC+CGG | + | chr8.3:8985397-8985416 | MS.gene57732:CDS | 65.0% |
CAAGGTCTACCGGCAGGCGG+AGG | + | chr8.3:8985359-8985378 | MS.gene57732:CDS | 70.0% | |
GGCACAGGTCCTCCACCACC+AGG | - | chr8.3:8984942-8984961 | None:intergenic | 70.0% | |
!! | GGTGGTGGTGGTGGTGGTGG+AGG | + | chr8.3:8985011-8985030 | MS.gene57732:CDS | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr8.3:8985011-8985030 | MS.gene57732:CDS | 70.0% |
!! | TGGCCCGGGTGCTGATTCGG+CGG | - | chr8.3:8984624-8984643 | None:intergenic | 70.0% |
GGTCTACCGGCAGGCGGAGG+AGG | + | chr8.3:8985362-8985381 | MS.gene57732:CDS | 75.0% | |
! | GGCGGAGGTGGAGGCGGTGG+TGG | + | chr8.3:8985185-8985204 | MS.gene57732:CDS | 80.0% |
!!! | GGTGGCGGAGGTGGAGGCGG+TGG | + | chr8.3:8985182-8985201 | MS.gene57732:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 8983826 | 8985670 | 8983826 | ID=MS.gene57732 |
chr8.3 | mRNA | 8983826 | 8985670 | 8983826 | ID=MS.gene57732.t1;Parent=MS.gene57732 |
chr8.3 | exon | 8983826 | 8983855 | 8983826 | ID=MS.gene57732.t1.exon1;Parent=MS.gene57732.t1 |
chr8.3 | CDS | 8983826 | 8983855 | 8983826 | ID=cds.MS.gene57732.t1;Parent=MS.gene57732.t1 |
chr8.3 | exon | 8983994 | 8984069 | 8983994 | ID=MS.gene57732.t1.exon2;Parent=MS.gene57732.t1 |
chr8.3 | CDS | 8983994 | 8984069 | 8983994 | ID=cds.MS.gene57732.t1;Parent=MS.gene57732.t1 |
chr8.3 | exon | 8984214 | 8985670 | 8984214 | ID=MS.gene57732.t1.exon3;Parent=MS.gene57732.t1 |
chr8.3 | CDS | 8984214 | 8985670 | 8984214 | ID=cds.MS.gene57732.t1;Parent=MS.gene57732.t1 |
Gene Sequence |
Protein sequence |