AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58069

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58069.t1 MTR_4g130360 71.721 244 58 3 73 314 154 388 8.92e-116 342
MS.gene58069.t1 MTR_4g130360 72.897 107 9 2 1 107 20 106 1.41e-30 120
MS.gene58069.t1 MTR_4g112860 57.488 207 68 4 132 322 259 461 4.76e-67 218
MS.gene58069.t1 MTR_4g112860 40.984 122 63 3 6 119 3 123 1.25e-14 74.7
MS.gene58069.t1 MTR_4g112860 57.488 207 68 4 132 322 259 461 1.38e-66 219
MS.gene58069.t1 MTR_4g112860 40.984 122 63 3 6 119 3 123 1.27e-14 75.1
MS.gene58069.t1 MTR_4g112860 57.488 207 68 4 132 322 259 461 7.01e-66 219
MS.gene58069.t1 MTR_4g112860 40.984 122 63 3 6 119 3 123 1.92e-14 74.3
MS.gene58069.t1 MTR_5g082990 57.436 195 61 4 131 322 65 240 8.09e-60 196
MS.gene58069.t1 MTR_2g058970 54.286 210 76 4 129 322 268 473 1.10e-58 200
MS.gene58069.t1 MTR_5g025810 44.710 293 103 11 67 322 35 305 4.05e-56 191
MS.gene58069.t1 MTR_4g112820 54.211 190 62 5 132 311 185 359 1.93e-54 185
MS.gene58069.t1 MTR_8g022470 52.299 174 77 4 132 301 27 198 9.51e-45 155
MS.gene58069.t1 MTR_4g134260 56.209 153 63 2 173 322 135 286 5.75e-44 156
MS.gene58069.t1 MTR_4g112860 50.694 144 51 4 133 260 260 399 6.08e-34 129
MS.gene58069.t1 MTR_4g112860 40.984 122 63 3 6 119 3 123 1.04e-14 74.7
MS.gene58069.t1 MTR_4g123500 37.563 197 108 5 133 322 142 330 2.46e-28 114
MS.gene58069.t1 MTR_5g083100 54.098 122 49 4 151 269 37 154 2.49e-27 111
MS.gene58069.t1 MTR_4g114810 40.415 193 41 5 133 322 179 300 1.44e-24 103
MS.gene58069.t1 MTR_8g022500 55.696 79 35 0 244 322 224 302 3.93e-19 88.2
MS.gene58069.t1 MTR_4g133130 46.875 96 31 2 229 322 50 127 4.25e-14 73.2
MS.gene58069.t1 MTR_4g130550 43.421 76 43 0 248 323 68 143 1.51e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58069.t1 AT1G73990 53.846 208 76 4 131 322 276 479 1.55e-60 204
MS.gene58069.t1 AT1G73990 53.846 208 76 4 131 322 276 479 1.92e-60 205

Find 74 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGACAACAACTGCATTAA+TGG 0.184426 8.2:+4578190 MS.gene58069:CDS
TGGATAATATTTACTCAAAT+TGG 0.197209 8.2:+4578210 MS.gene58069:CDS
AATTTGGAAGGTAAGATTTC+TGG 0.242205 8.2:+4577639 MS.gene58069:CDS
CAGAAAATCTTACCTTAGTT+TGG 0.283331 8.2:+4578744 MS.gene58069:CDS
TCATAACGGATTTGCTATAT+AGG 0.286656 8.2:+4578342 MS.gene58069:CDS
CAGTTCAGGAGGTAAATTTC+GGG 0.292898 8.2:+4578598 MS.gene58069:CDS
CCAAGCCTTTCCTTCAAGTT+GGG 0.324316 8.2:-4578377 None:intergenic
ACAGTTCAGGAGGTAAATTT+CGG 0.345303 8.2:+4578597 MS.gene58069:CDS
ATAGCCATCATTCGAGTCTC+AGG 0.356408 8.2:+4578488 MS.gene58069:CDS
CATAACGGATTTGCTATATA+GGG 0.361873 8.2:+4578343 MS.gene58069:CDS
CGCTCGTGCGGTAGAATTTG+AGG 0.386162 8.2:-4577545 None:intergenic
AGTTTATTGAGAATATATAT+AGG 0.390012 8.2:+4578531 MS.gene58069:CDS
CCCAAGCCTTTCCTTCAAGT+TGG 0.390394 8.2:-4578378 None:intergenic
GTTTATTGAGAATATATATA+GGG 0.396139 8.2:+4578532 MS.gene58069:CDS
CTCTGGCTTGAAGAAGTATC+TGG 0.400164 8.2:+4577737 MS.gene58069:CDS
ATTGTCCGAATTGACAGTTC+AGG 0.411636 8.2:+4578584 MS.gene58069:CDS
TTGGTTAACTTTGTAACTAA+AGG 0.412796 8.2:+4578284 MS.gene58069:CDS
CCAACTTGAAGGAAAGGCTT+GGG 0.422842 8.2:+4578378 MS.gene58069:CDS
TGGATAATCAACATCCTTGC+CGG 0.434812 8.2:-4577688 None:intergenic
GCTCGTGCGGTAGAATTTGA+GGG 0.437753 8.2:-4577544 None:intergenic
TACCTCCTGAACTGTCAATT+CGG 0.443292 8.2:-4578589 None:intergenic
GTTCTTCAAATCAATTTGTC+CGG 0.445006 8.2:+4577813 MS.gene58069:CDS
GAATTTGAGGGGTTTATGAA+TGG 0.450237 8.2:-4577532 None:intergenic
CAGATCATCAACAGAATTCA+AGG 0.474665 8.2:+4578556 MS.gene58069:CDS
AGGGGTTTATGAATGGTAGC+AGG 0.476548 8.2:-4577525 None:intergenic
AAGAGAAAATGTCGAAAACT+TGG 0.476552 8.2:+4578265 MS.gene58069:CDS
AAGGATGTTGATTATCCAAC+CGG 0.477750 8.2:+4577693 MS.gene58069:CDS
GCAGGATACTACTTAGCAAC+GGG 0.485513 8.2:+4578704 MS.gene58069:CDS
CAAAGAAGAGGGTTTCATAA+CGG 0.489037 8.2:+4578328 MS.gene58069:CDS
TACTACTTAGCAACGGGAGC+AGG 0.490304 8.2:+4578710 MS.gene58069:CDS
TTCGGGCATCTAATTATATG+TGG 0.492637 8.2:+4578615 MS.gene58069:CDS
TCTGATGTGGCAACAAGTGC+AGG 0.494828 8.2:+4578686 MS.gene58069:CDS
AATCGACTGTTGGAATATCA+AGG 0.496160 8.2:+4578450 MS.gene58069:CDS
TGATATTATCCCCAACTTGA+AGG 0.496185 8.2:+4578367 MS.gene58069:CDS
TACCTCTGAATCGGTGTGTA+GGG 0.501142 8.2:-4577850 None:intergenic
CGCGTTAGTAAATCGACTGT+TGG 0.501184 8.2:+4578440 MS.gene58069:CDS
TAGAGATAATACCTCTGAAT+CGG 0.505324 8.2:-4577859 None:intergenic
CCCAACTTGAAGGAAAGGCT+TGG 0.506916 8.2:+4578377 MS.gene58069:CDS
TTTGATTTCATTCCACACTC+TGG 0.514952 8.2:+4577720 MS.gene58069:CDS
TTATCCCCAACTTGAAGGAA+AGG 0.520815 8.2:+4578372 MS.gene58069:CDS
TGGAATGAAATCAAAATCTC+CGG 0.524479 8.2:-4577712 None:intergenic
CAAGCCTTTCCTTCAAGTTG+GGG 0.529315 8.2:-4578376 None:intergenic
AACATCCTTGCCGGAAGAAG+AGG 0.530642 8.2:-4577679 None:intergenic
ATCAGATATTGAAGCAATGA+CGG 0.536024 8.2:-4578669 None:intergenic
TATTCTTTGAAAGAAACAAA+AGG 0.543012 8.2:-4578413 None:intergenic
GGACTAAAAGAACCAAACTA+AGG 0.545922 8.2:-4578756 None:intergenic
TCAGATATTGAAGCAATGAC+GGG 0.551209 8.2:-4578668 None:intergenic
ATACCTCTGAATCGGTGTGT+AGG 0.552557 8.2:-4577851 None:intergenic
CACCCTACACACCGATTCAG+AGG 0.558538 8.2:+4577848 MS.gene58069:CDS
TGAATCGGTGTGTAGGGTGT+CGG 0.562552 8.2:-4577844 None:intergenic
GATGTAGTATCTTCTTCCAC+CGG 0.568021 8.2:+4578236 MS.gene58069:CDS
AGTAGAAGAACTCAAAGAAG+AGG 0.568425 8.2:+4578316 MS.gene58069:CDS
AGACCCTGAGACTCGAATGA+TGG 0.571972 8.2:-4578492 None:intergenic
CTCGTGCGGTAGAATTTGAG+GGG 0.580670 8.2:-4577543 None:intergenic
CTGCTAGCACTCCCCTCAGA+GGG 0.583729 8.2:+4577774 MS.gene58069:CDS
AGCAGGTGATATACAGCGAT+CGG 0.592109 8.2:-4577508 None:intergenic
GTAGAAGAACTCAAAGAAGA+GGG 0.593743 8.2:+4578317 MS.gene58069:CDS
TAGGGTGTCGGATATTATGC+CGG 0.594782 8.2:-4577832 None:intergenic
ATGAAATCAAAATCTCCGGT+TGG 0.594805 8.2:-4577708 None:intergenic
TACTTCTTCAAGCCAGAGTG+TGG 0.594882 8.2:-4577732 None:intergenic
TTAATGCAGTTGTTGTCTCG+TGG 0.598388 8.2:-4578187 None:intergenic
ATCGACTGTTGGAATATCAA+GGG 0.598413 8.2:+4578451 MS.gene58069:CDS
CATTGCTTCAATATCTGATG+TGG 0.601190 8.2:+4578673 MS.gene58069:CDS
TAGCCATCATTCGAGTCTCA+GGG 0.606571 8.2:+4578489 MS.gene58069:CDS
CGATCAATAATAGAAGATGA+TGG 0.608918 8.2:-4577582 None:intergenic
TGCAGGATACTACTTAGCAA+CGG 0.610387 8.2:+4578703 MS.gene58069:CDS
CGGAAGAAGAGGAAAATAAG+TGG 0.613550 8.2:-4577668 None:intergenic
ATAATAGAAGATGATGGTGG+CGG 0.619265 8.2:-4577576 None:intergenic
GTCCGAATTGACAGTTCAGG+AGG 0.622572 8.2:+4578587 MS.gene58069:CDS
AGGGTCTATCAGTAGTGCAA+CGG 0.633641 8.2:+4578508 MS.gene58069:CDS
CAACTTGAAGGAAAGGCTTG+GGG 0.634279 8.2:+4578379 MS.gene58069:CDS
TCTGCTAGCACTCCCCTCAG+AGG 0.672433 8.2:+4577773 MS.gene58069:CDS
GCGGTGATATTGCGCTCGTG+CGG 0.694021 8.2:-4577557 None:intergenic
TCAATAATAGAAGATGATGG+TGG 0.696702 8.2:-4577579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTATTGAGAATATATAT+AGG + chr8.2:4578531-4578550 MS.gene58069:CDS 15.0%
!! CACAAATTTAGTTATATTAA+GGG + chr8.2:4578140-4578159 MS.gene58069:intron 15.0%
!! GTTTATTGAGAATATATATA+GGG + chr8.2:4578532-4578551 MS.gene58069:CDS 15.0%
!! TCACAAATTTAGTTATATTA+AGG + chr8.2:4578139-4578158 MS.gene58069:intron 15.0%
!!! AAATTGAATTTTTTGTGAAT+CGG - chr8.2:4577624-4577643 None:intergenic 15.0%
!! ATCTTAAATTTCAGAAAATC+AGG + chr8.2:4577999-4578018 MS.gene58069:intron 20.0%
!! GATTCACAAAAAATTCAATT+TGG + chr8.2:4577623-4577642 MS.gene58069:CDS 20.0%
!! TGGATAATATTTACTCAAAT+TGG + chr8.2:4578210-4578229 MS.gene58069:CDS 20.0%
!!! TATTCTTTGAAAGAAACAAA+AGG - chr8.2:4578416-4578435 None:intergenic 20.0%
! AACAAATTATCGCAAATTTG+AGG - chr8.2:4577885-4577904 None:intergenic 25.0%
! AATATCCAAAATTTGAACAC+TGG + chr8.2:4577945-4577964 MS.gene58069:intron 25.0%
! AGATATACAACATAAATACG+AGG - chr8.2:4577924-4577943 None:intergenic 25.0%
! ATAACTAAATTTGTGAACAG+TGG - chr8.2:4578135-4578154 None:intergenic 25.0%
! CACAAAAAATTCAATTTGGA+AGG + chr8.2:4577627-4577646 MS.gene58069:CDS 25.0%
! TAACTAAATTTGTGAACAGT+GGG - chr8.2:4578134-4578153 None:intergenic 25.0%
! TTGGTTAACTTTGTAACTAA+AGG + chr8.2:4578284-4578303 MS.gene58069:CDS 25.0%
AAGAGAAAATGTCGAAAACT+TGG + chr8.2:4578265-4578284 MS.gene58069:CDS 30.0%
AATTTGGAAGGTAAGATTTC+TGG + chr8.2:4577639-4577658 MS.gene58069:CDS 30.0%
ATAAATACGAGGATCATACA+TGG - chr8.2:4577913-4577932 None:intergenic 30.0%
ATCAGATATTGAAGCAATGA+CGG - chr8.2:4578672-4578691 None:intergenic 30.0%
CAGAAAATCTTACCTTAGTT+TGG + chr8.2:4578744-4578763 MS.gene58069:CDS 30.0%
CGATCAATAATAGAAGATGA+TGG - chr8.2:4577585-4577604 None:intergenic 30.0%
GTAAACTAGATGAAATTCGA+AGG + chr8.2:4577973-4577992 MS.gene58069:intron 30.0%
GTTCTTCAAATCAATTTGTC+CGG + chr8.2:4577813-4577832 MS.gene58069:CDS 30.0%
TACAAATGAACCTCAACAAA+AGG - chr8.2:4578107-4578126 None:intergenic 30.0%
TAGAGATAATACCTCTGAAT+CGG - chr8.2:4577862-4577881 None:intergenic 30.0%
TGGAATGAAATCAAAATCTC+CGG - chr8.2:4577715-4577734 None:intergenic 30.0%
TTTGTTGAGGTTCATTTGTA+TGG + chr8.2:4578107-4578126 MS.gene58069:intron 30.0%
! ACTCTTTTACTCCAATTTCA+GGG - chr8.2:4578046-4578065 None:intergenic 30.0%
! GACATTTTCTCTTTTCTTTC+CGG - chr8.2:4578258-4578277 None:intergenic 30.0%
! TACTCTTTTACTCCAATTTC+AGG - chr8.2:4578047-4578066 None:intergenic 30.0%
! TCAATAATAGAAGATGATGG+TGG - chr8.2:4577582-4577601 None:intergenic 30.0%
!! CATAACGGATTTGCTATATA+GGG + chr8.2:4578343-4578362 MS.gene58069:CDS 30.0%
!! TCATAACGGATTTGCTATAT+AGG + chr8.2:4578342-4578361 MS.gene58069:CDS 30.0%
AATCGACTGTTGGAATATCA+AGG + chr8.2:4578450-4578469 MS.gene58069:CDS 35.0%
AATGAACCTCAACAAAAGGA+TGG - chr8.2:4578103-4578122 None:intergenic 35.0%
ACAGTTCAGGAGGTAAATTT+CGG + chr8.2:4578597-4578616 MS.gene58069:CDS 35.0%
AGTAGAAGAACTCAAAGAAG+AGG + chr8.2:4578316-4578335 MS.gene58069:CDS 35.0%
ATCGACTGTTGGAATATCAA+GGG + chr8.2:4578451-4578470 MS.gene58069:CDS 35.0%
ATGAAATCAAAATCTCCGGT+TGG - chr8.2:4577711-4577730 None:intergenic 35.0%
ATGAACCTCAACAAAAGGAT+GGG - chr8.2:4578102-4578121 None:intergenic 35.0%
CAAAGAAGAGGGTTTCATAA+CGG + chr8.2:4578328-4578347 MS.gene58069:CDS 35.0%
CAGATCATCAACAGAATTCA+AGG + chr8.2:4578556-4578575 MS.gene58069:CDS 35.0%
CATTGCTTCAATATCTGATG+TGG + chr8.2:4578673-4578692 MS.gene58069:CDS 35.0%
GAATTTGAGGGGTTTATGAA+TGG - chr8.2:4577535-4577554 None:intergenic 35.0%
GTAGAAGAACTCAAAGAAGA+GGG + chr8.2:4578317-4578336 MS.gene58069:CDS 35.0%
TCAGATATTGAAGCAATGAC+GGG - chr8.2:4578671-4578690 None:intergenic 35.0%
TCCAAAATTTGAACACTGGT+TGG + chr8.2:4577949-4577968 MS.gene58069:intron 35.0%
TGATATTATCCCCAACTTGA+AGG + chr8.2:4578367-4578386 MS.gene58069:CDS 35.0%
TTCGGGCATCTAATTATATG+TGG + chr8.2:4578615-4578634 MS.gene58069:CDS 35.0%
TTTGCTTATGTCCCTGAAAT+TGG + chr8.2:4578032-4578051 MS.gene58069:intron 35.0%
! AAGGATGTTGATTATCCAAC+CGG + chr8.2:4577693-4577712 MS.gene58069:CDS 35.0%
! ATTTTCTCTTTTCTTTCCGG+TGG - chr8.2:4578255-4578274 None:intergenic 35.0%
! CAAAATTTGAACACTGGTTG+GGG + chr8.2:4577951-4577970 MS.gene58069:intron 35.0%
! CCAAAATTTGAACACTGGTT+GGG + chr8.2:4577950-4577969 MS.gene58069:intron 35.0%
! TTTGATTTCATTCCACACTC+TGG + chr8.2:4577720-4577739 MS.gene58069:CDS 35.0%
!! ATAATAGAAGATGATGGTGG+CGG - chr8.2:4577579-4577598 None:intergenic 35.0%
!! CACTTATTTTCCTCTTCTTC+CGG + chr8.2:4577669-4577688 MS.gene58069:CDS 35.0%
ATTGTCCGAATTGACAGTTC+AGG + chr8.2:4578584-4578603 MS.gene58069:CDS 40.0%
CAGTTCAGGAGGTAAATTTC+GGG + chr8.2:4578598-4578617 MS.gene58069:CDS 40.0%
CGAGACAACAACTGCATTAA+TGG + chr8.2:4578190-4578209 MS.gene58069:CDS 40.0%
CGGAAGAAGAGGAAAATAAG+TGG - chr8.2:4577671-4577690 None:intergenic 40.0%
GATGTAGTATCTTCTTCCAC+CGG + chr8.2:4578236-4578255 MS.gene58069:CDS 40.0%
TACCTCCTGAACTGTCAATT+CGG - chr8.2:4578592-4578611 None:intergenic 40.0%
TGCAGGATACTACTTAGCAA+CGG + chr8.2:4578703-4578722 MS.gene58069:CDS 40.0%
TGGATAATCAACATCCTTGC+CGG - chr8.2:4577691-4577710 None:intergenic 40.0%
TTAATGCAGTTGTTGTCTCG+TGG - chr8.2:4578190-4578209 None:intergenic 40.0%
TTATCCCCAACTTGAAGGAA+AGG + chr8.2:4578372-4578391 MS.gene58069:CDS 40.0%
! ATATGCCCATCCTTTTGTTG+AGG + chr8.2:4578094-4578113 MS.gene58069:intron 40.0%
! CCCAACCAGTGTTCAAATTT+TGG - chr8.2:4577953-4577972 None:intergenic 40.0%
!!! TGAAGCAATGACGGGTTTTT+CGG - chr8.2:4578663-4578682 None:intergenic 40.0%
AGCAGGTGATATACAGCGAT+CGG - chr8.2:4577511-4577530 None:intergenic 45.0%
AGGGGTTTATGAATGGTAGC+AGG - chr8.2:4577528-4577547 None:intergenic 45.0%
AGGGTCTATCAGTAGTGCAA+CGG + chr8.2:4578508-4578527 MS.gene58069:CDS 45.0%
ATACCTCTGAATCGGTGTGT+AGG - chr8.2:4577854-4577873 None:intergenic 45.0%
ATAGCCATCATTCGAGTCTC+AGG + chr8.2:4578488-4578507 MS.gene58069:CDS 45.0%
CAACTTGAAGGAAAGGCTTG+GGG + chr8.2:4578379-4578398 MS.gene58069:CDS 45.0%
CCAACTTGAAGGAAAGGCTT+GGG + chr8.2:4578378-4578397 MS.gene58069:CDS 45.0%
CGCGTTAGTAAATCGACTGT+TGG + chr8.2:4578440-4578459 MS.gene58069:CDS 45.0%
GCAGGATACTACTTAGCAAC+GGG + chr8.2:4578704-4578723 MS.gene58069:CDS 45.0%
TACCTCTGAATCGGTGTGTA+GGG - chr8.2:4577853-4577872 None:intergenic 45.0%
TACTTCTTCAAGCCAGAGTG+TGG - chr8.2:4577735-4577754 None:intergenic 45.0%
TAGCCATCATTCGAGTCTCA+GGG + chr8.2:4578489-4578508 MS.gene58069:CDS 45.0%
! ATTTTCCTCTTCTTCCGGCA+AGG + chr8.2:4577674-4577693 MS.gene58069:CDS 45.0%
! CCAAGCCTTTCCTTCAAGTT+GGG - chr8.2:4578380-4578399 None:intergenic 45.0%
! CGTTTTTAACACCCTCTGAG+GGG - chr8.2:4577788-4577807 None:intergenic 45.0%
!! CAAGCCTTTCCTTCAAGTTG+GGG - chr8.2:4578379-4578398 None:intergenic 45.0%
!! CCCTCAGAGGGTGTTAAAAA+CGG + chr8.2:4577786-4577805 MS.gene58069:CDS 45.0%
!! CCGTTTTTAACACCCTCTGA+GGG - chr8.2:4577789-4577808 None:intergenic 45.0%
!! CTCTGGCTTGAAGAAGTATC+TGG + chr8.2:4577737-4577756 MS.gene58069:CDS 45.0%
!! TAGGGTGTCGGATATTATGC+CGG - chr8.2:4577835-4577854 None:intergenic 45.0%
AACATCCTTGCCGGAAGAAG+AGG - chr8.2:4577682-4577701 None:intergenic 50.0%
AGACCCTGAGACTCGAATGA+TGG - chr8.2:4578495-4578514 None:intergenic 50.0%
CCCAACTTGAAGGAAAGGCT+TGG + chr8.2:4578377-4578396 MS.gene58069:CDS 50.0%
CCCAAGCCTTTCCTTCAAGT+TGG - chr8.2:4578381-4578400 None:intergenic 50.0%
CTCGTGCGGTAGAATTTGAG+GGG - chr8.2:4577546-4577565 None:intergenic 50.0%
GCTCGTGCGGTAGAATTTGA+GGG - chr8.2:4577547-4577566 None:intergenic 50.0%
GTCCGAATTGACAGTTCAGG+AGG + chr8.2:4578587-4578606 MS.gene58069:CDS 50.0%
TACTACTTAGCAACGGGAGC+AGG + chr8.2:4578710-4578729 MS.gene58069:CDS 50.0%
TCTGATGTGGCAACAAGTGC+AGG + chr8.2:4578686-4578705 MS.gene58069:CDS 50.0%
TGAATCGGTGTGTAGGGTGT+CGG - chr8.2:4577847-4577866 None:intergenic 50.0%
!!! GCCGTTTTTAACACCCTCTG+AGG - chr8.2:4577790-4577809 None:intergenic 50.0%
CGCTCGTGCGGTAGAATTTG+AGG - chr8.2:4577548-4577567 None:intergenic 55.0%
!! CACCCTACACACCGATTCAG+AGG + chr8.2:4577848-4577867 MS.gene58069:CDS 55.0%
CTGCTAGCACTCCCCTCAGA+GGG + chr8.2:4577774-4577793 MS.gene58069:CDS 60.0%
GCGGTGATATTGCGCTCGTG+CGG - chr8.2:4577560-4577579 None:intergenic 60.0%
TCTGCTAGCACTCCCCTCAG+AGG + chr8.2:4577773-4577792 MS.gene58069:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 4577504 4578775 4577504 ID=MS.gene58069
chr8.2 mRNA 4577504 4578775 4577504 ID=MS.gene58069.t1;Parent=MS.gene58069
chr8.2 exon 4577504 4577869 4577504 ID=MS.gene58069.t1.exon1;Parent=MS.gene58069.t1
chr8.2 CDS 4577504 4577869 4577504 ID=cds.MS.gene58069.t1;Parent=MS.gene58069.t1
chr8.2 exon 4578161 4578775 4578161 ID=MS.gene58069.t1.exon2;Parent=MS.gene58069.t1
chr8.2 CDS 4578161 4578775 4578161 ID=cds.MS.gene58069.t1;Parent=MS.gene58069.t1
Gene Sequence

>MS.gene58069

ATGGCCGATCGCTGTATATCACCTGCTACCATTCATAAACCCCTCAAATTCTACCGCACGAGCGCAATATCACCGCCACCATCATCTTCTATTATTGATCGCTTGACATCTTCTGCTCCGATTCACAAAAAATTCAATTTGGAAGGTAAGATTTCTGGTCTGATCCACTTATTTTCCTCTTCTTCCGGCAAGGATGTTGATTATCCAACCGGAGATTTTGATTTCATTCCACACTCTGGCTTGAAGAAGTATCTGGTTCAACTTAAGACTCTGCTAGCACTCCCCTCAGAGGGTGTTAAAAACGGCAGTGTTCTTCAAATCAATTTGTCCGGCATAATATCCGACACCCTACACACCGATTCAGAGGTATTATCTCTACCTCAAATTTGCGATAATTTGTTGAAAGCCATGTATGATCCTCGTATTTATGTTGTATATCTCAATATCCAAAATTTGAACACTGGTTGGGGTAAACTAGATGAAATTCGAAGGCAAATCTTAAATTTCAGAAAATCAGGAAAACTTATCTTTGCTTATGTCCCTGAAATTGGAGTAAAAGAGTATTACGTCGCTAGTGCATGTAAAGAAATATATGCCCATCCTTTTGTTGAGGTTCATTTGTATGGACCCACTGTTCACAAATTTAGTTATATTAAGGGTGTTTATCACAACTTTGACTTTAGCCACGAGACAACAACTGCATTAATGGATAATATTTACTCAAATTGGCTAGATGTAGTATCTTCTTCCACCGGAAAGAAAAGAGAAAATGTCGAAAACTTGGTTAACTTTGTAACTAAAGGTGTCTATCAAGTAGAAGAACTCAAAGAAGAGGGTTTCATAACGGATTTGCTATATAGGGATGATATTATCCCCAACTTGAAGGAAAGGCTTGGGGTGAGATCACTGCCTTTTGTTTCTTTCAAAGAATACTCTCGCGTTAGTAAATCGACTGTTGGAATATCAAGGGCTGAAGAAGAACTAATAGCCATCATTCGAGTCTCAGGGTCTATCAGTAGTGCAACGGAGTTTATTGAGAATATATATAGGGTCAGATCATCAACAGAATTCAAGGCTGTTATTGTCCGAATTGACAGTTCAGGAGGTAAATTTCGGGCATCTAATTATATGTGGAGAGAAATGAAACGTCTTGCTGCCGAAAAACCCGTCATTGCTTCAATATCTGATGTGGCAACAAGTGCAGGATACTACTTAGCAACGGGAGCAGGAGCTATTGTTGCAGAAAATCTTACCTTAGTTTGGTTCTTTTAG
Protein sequence

>MS.gene58069.t1

MADRCISPATIHKPLKFYRTSAISPPPSSSIIDRLTSSAPIHKKFNLEGKISGLIHLFSSSSGKDVDYPTGDFDFIPHSGLKKYLVQLKTLLALPSEGVKNGSVLQINLSGIISDTLHTDSEGVYHNFDFSHETTTALMDNIYSNWLDVVSSSTGKKRENVENLVNFVTKGVYQVEELKEEGFITDLLYRDDIIPNLKERLGVRSLPFVSFKEYSRVSKSTVGISRAEEELIAIIRVSGSISSATEFIENIYRVRSSTEFKAVIVRIDSSGGKFRASNYMWREMKRLAAEKPVIASISDVATSAGYYLATGAGAIVAENLTLVWFF