Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58172.t1 | RHN43011.1 | 74.7 | 479 | 118 | 3 | 1 | 478 | 110 | 586 | 5.40E-202 | 714.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58172.t1 | P08770 | 27.7 | 530 | 345 | 16 | 8 | 522 | 242 | 748 | 1.4e-44 | 182.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58172.t1 | A0A396GS75 | 74.7 | 479 | 118 | 3 | 1 | 478 | 110 | 586 | 3.9e-202 | 714.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051655 | MS.gene58172 | 0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene060520 | MS.gene58172 | 0.80836 | 3.22E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene58172 | 0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene58172 | 0.805149 | 1.53E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58172.t1 | MTR_8g091950 | 87.143 | 140 | 17 | 1 | 471 | 610 | 2 | 140 | 2.47e-79 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58172.t1 | AT3G42170 | 26.775 | 493 | 311 | 14 | 1 | 480 | 172 | 627 | 1.28e-48 | 181 |
| MS.gene58172.t1 | AT3G42170 | 26.775 | 493 | 311 | 14 | 1 | 480 | 150 | 605 | 1.71e-48 | 180 |
| MS.gene58172.t1 | AT5G64820 | 35.246 | 122 | 68 | 2 | 492 | 604 | 25 | 144 | 7.11e-15 | 72.4 |
| MS.gene58172.t1 | AT1G16850 | 40.000 | 95 | 52 | 1 | 508 | 597 | 41 | 135 | 1.44e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTGAGTGGGATGAATTT+AGG | 0.143169 | 4.2:+10203258 | MS.gene58172:CDS |
| CTACAAACTTACTCCAAATT+TGG | 0.167313 | 4.2:-10206838 | None:intergenic |
| CTCATTAAAAGAAGCAAATT+TGG | 0.195198 | 4.2:-10203288 | None:intergenic |
| TGCTCGTGTCTTGGACCTTA+TGG | 0.214270 | 4.2:+10203757 | MS.gene58172:CDS |
| ATGTAAATGCTTTACAATAT+TGG | 0.232405 | 4.2:+10204696 | MS.gene58172:CDS |
| AACGGTGTCAGTTAGTAATT+TGG | 0.243488 | 4.2:-10206734 | None:intergenic |
| TATGGATGATCAATGGAATT+TGG | 0.253112 | 4.2:+10203484 | MS.gene58172:CDS |
| TGTTGAGTGGGATGAATTTA+GGG | 0.256004 | 4.2:+10203259 | MS.gene58172:CDS |
| GAGAATCTTTGGCCACATTT+TGG | 0.261276 | 4.2:-10206693 | None:intergenic |
| TATGGTTGAAGAGAGTTTAA+AGG | 0.292459 | 4.2:+10203775 | MS.gene58172:CDS |
| AAAACAGCTGGCTGCAGTTA+AGG | 0.299415 | 4.2:+10203385 | MS.gene58172:CDS |
| TATGGTATGATTCTTGCTTT+TGG | 0.301468 | 4.2:+10204265 | MS.gene58172:CDS |
| ATGTGGATGTGTCCGGTAAA+TGG | 0.329056 | 4.2:+10203924 | MS.gene58172:CDS |
| TCCTCTTTCCCACTCTTCAC+TGG | 0.340787 | 4.2:-10204041 | None:intergenic |
| GACAAGTATATGAGTGAATA+TGG | 0.352838 | 4.2:+10204247 | MS.gene58172:CDS |
| GAAGGTGATTGATTGTTTGC+AGG | 0.362557 | 4.2:+10203568 | MS.gene58172:CDS |
| TGTGTTTGAGCTTTCATTGT+TGG | 0.387670 | 4.2:+10203414 | MS.gene58172:CDS |
| CAGGGGTTACATGCTGGAAT+TGG | 0.395685 | 4.2:-10206654 | None:intergenic |
| TGAAATTGATGCAACTTTGT+TGG | 0.402252 | 4.2:-10204422 | None:intergenic |
| AAGAGTATTATATCCTTTCA+AGG | 0.402568 | 4.2:+10204732 | MS.gene58172:CDS |
| TCCCACTCAACAAACTGAAA+TGG | 0.408842 | 4.2:-10203248 | None:intergenic |
| AAAGGTAGTAAGTGGTGTAT+TGG | 0.412099 | 4.2:+10203793 | MS.gene58172:CDS |
| AAATCAGCAGCTGAATTTGT+TGG | 0.419411 | 4.2:+10208542 | MS.gene58172:CDS |
| CTTTCCCACTCTTCACTGGA+TGG | 0.428816 | 4.2:-10204037 | None:intergenic |
| ATAAGTAGAAACCCATTTAC+CGG | 0.433597 | 4.2:-10203936 | None:intergenic |
| TATCATGTGAAGGGTTGAAA+TGG | 0.435470 | 4.2:-10203529 | None:intergenic |
| AAACAGCTGGCTGCAGTTAA+GGG | 0.437970 | 4.2:+10203386 | MS.gene58172:CDS |
| GTCATAGGAATATGTTGAAA+AGG | 0.438311 | 4.2:+10204601 | MS.gene58172:intron |
| ACTTCTTCCGCTTCTTCTCA+TGG | 0.439368 | 4.2:+10203437 | MS.gene58172:CDS |
| TCCATTTCAGTTTGTTGAGT+GGG | 0.446170 | 4.2:+10203247 | MS.gene58172:CDS |
| TGATTGATTGTTTGCAGGAA+TGG | 0.447807 | 4.2:+10203573 | MS.gene58172:CDS |
| GATTGATTGTTTGCAGGAAT+GGG | 0.451798 | 4.2:+10203574 | MS.gene58172:CDS |
| TGGCCACCTTCATCAGCAGC+AGG | 0.453286 | 4.2:-10206673 | None:intergenic |
| CAGCAGCAGGGGTTACATGC+TGG | 0.456273 | 4.2:-10206660 | None:intergenic |
| AAGGAAGACAGACTTGCTTT+CGG | 0.459823 | 4.2:+10204486 | MS.gene58172:CDS |
| GAAAGTTTACTTGCTTGAAA+AGG | 0.460044 | 4.2:+10203352 | MS.gene58172:CDS |
| TCTAAATAAGTATGCAATGT+AGG | 0.460686 | 4.2:-10204130 | None:intergenic |
| TTAAACTCTCTTCAACCATA+AGG | 0.463297 | 4.2:-10203772 | None:intergenic |
| TTCAATTAGATTACCTGTGA+GGG | 0.465347 | 4.2:+10204441 | MS.gene58172:CDS |
| TCCAGTGAAGAGTGGGAAAG+AGG | 0.481839 | 4.2:+10204040 | MS.gene58172:CDS |
| TGTGGATGTGTCCGGTAAAT+GGG | 0.486423 | 4.2:+10203925 | MS.gene58172:CDS |
| TAAGTGTTGTGCTCGTGTCT+TGG | 0.489616 | 4.2:+10203748 | MS.gene58172:CDS |
| TTTCCCACTCTTCACTGGAT+GGG | 0.492201 | 4.2:-10204036 | None:intergenic |
| CATCCCTAGCCAACCTTGAA+AGG | 0.496905 | 4.2:-10204745 | None:intergenic |
| GAGAGTTTAAAGGTAGTAAG+TGG | 0.500460 | 4.2:+10203785 | MS.gene58172:CDS |
| CAATGTGTTGAAGAAGTTGA+TGG | 0.505030 | 4.2:+10203878 | MS.gene58172:CDS |
| AAAATCCCATGAAAGCTCTT+GGG | 0.505602 | 4.2:+10206768 | MS.gene58172:CDS |
| AAAAGCAAAGAATCAGTTGA+AGG | 0.507499 | 4.2:+10208512 | MS.gene58172:CDS |
| GTAACCCCTGCTGCTGATGA+AGG | 0.514461 | 4.2:+10206667 | MS.gene58172:CDS |
| CAAACTTACTCCAAATTTGG+TGG | 0.516547 | 4.2:-10206835 | None:intergenic |
| GGCCACCTTCATCAGCAGCA+GGG | 0.529923 | 4.2:-10206672 | None:intergenic |
| GAGAGGCTAGAAAGATATGC+AGG | 0.531332 | 4.2:+10204623 | MS.gene58172:CDS |
| AAAACTGCATCTGAAGATCA+TGG | 0.536891 | 4.2:-10206810 | None:intergenic |
| AGTAGATTCAGAAATTATGT+TGG | 0.537129 | 4.2:-10204104 | None:intergenic |
| AGACACTACAGATTCTGATA+AGG | 0.542472 | 4.2:+10208598 | MS.gene58172:CDS |
| AGCTCAAAACTATCATGTGA+AGG | 0.546391 | 4.2:-10203539 | None:intergenic |
| TCGCAGTGCATTTGAACACA+TGG | 0.551660 | 4.2:+10203985 | MS.gene58172:CDS |
| GTGGTGTATTGGACAAGATA+AGG | 0.558276 | 4.2:+10203804 | MS.gene58172:CDS |
| GCCACCTTCATCAGCAGCAG+GGG | 0.559916 | 4.2:-10206671 | None:intergenic |
| GGCTTGCATGTGGATGTGTC+CGG | 0.562567 | 4.2:+10203917 | MS.gene58172:CDS |
| TTTCTCCCAAGAGCTTTCAT+GGG | 0.569638 | 4.2:-10206773 | None:intergenic |
| AATATAACCATGAGAAGAAG+CGG | 0.571617 | 4.2:-10203444 | None:intergenic |
| GTTGAGTGGGATGAATTTAG+GGG | 0.575774 | 4.2:+10203260 | MS.gene58172:CDS |
| TACAGAGACAGTAAAAGATA+AGG | 0.576841 | 4.2:+10204354 | MS.gene58172:CDS |
| TTCCATTTCAGTTTGTTGAG+TGG | 0.578584 | 4.2:+10203246 | MS.gene58172:CDS |
| CGCAGTGCATTTGAACACAT+GGG | 0.586569 | 4.2:+10203986 | MS.gene58172:CDS |
| AGGAATATGTTGAAAAGGAG+AGG | 0.590759 | 4.2:+10204606 | MS.gene58172:intron |
| ATTGATTGTTTGCAGGAATG+GGG | 0.593807 | 4.2:+10203575 | MS.gene58172:CDS |
| TTGCCCATCCAGTGAAGAGT+GGG | 0.595769 | 4.2:+10204033 | MS.gene58172:CDS |
| TTTCAATTAGATTACCTGTG+AGG | 0.604805 | 4.2:+10204440 | MS.gene58172:CDS |
| TATTTGAAAGAGAGAGACAG+AGG | 0.606953 | 4.2:+10204668 | MS.gene58172:CDS |
| ATGTGAGTGTGTCAAACTCT+AGG | 0.607095 | 4.2:+10203840 | MS.gene58172:CDS |
| TGTCAGTTAGTAATTTGGAA+AGG | 0.607458 | 4.2:-10206729 | None:intergenic |
| AATCCATAAGACAAAAGAGA+AGG | 0.608547 | 4.2:+10208571 | MS.gene58172:CDS |
| GCTCAAAACTATCATGTGAA+GGG | 0.613016 | 4.2:-10203538 | None:intergenic |
| ATTGCCCATCCAGTGAAGAG+TGG | 0.614031 | 4.2:+10204032 | MS.gene58172:CDS |
| GTTGAGAACTTTCATCACAT+CGG | 0.614315 | 4.2:+10203697 | MS.gene58172:CDS |
| GTAAAACGAGAATCCCTCAC+AGG | 0.619596 | 4.2:-10204454 | None:intergenic |
| GTTAGTAATTTGGAAAGGCG+TGG | 0.619952 | 4.2:-10206724 | None:intergenic |
| GATGGCGGTGATAGTAGCGA+TGG | 0.627538 | 4.2:+10203896 | MS.gene58172:CDS |
| GTATTGGACAAGATAAGGAA+CGG | 0.634870 | 4.2:+10203809 | MS.gene58172:CDS |
| CAGCTGGCTGCAGTTAAGGG+TGG | 0.640291 | 4.2:+10203389 | MS.gene58172:CDS |
| AAGATAAGGTGAGCAATGTG+AGG | 0.641913 | 4.2:+10204368 | MS.gene58172:CDS |
| AGGGGAAAAGGAGAACATGA+AGG | 0.650023 | 4.2:+10208458 | MS.gene58172:CDS |
| ACCCCTGCTGCTGATGAAGG+TGG | 0.657057 | 4.2:+10206670 | MS.gene58172:CDS |
| TAGTAGCGATGGCTTGCATG+TGG | 0.661586 | 4.2:+10203907 | MS.gene58172:CDS |
| TGATGAAGGTGGCCAAAATG+TGG | 0.672717 | 4.2:+10206681 | MS.gene58172:CDS |
| AGATGACAAGATAAGAGACA+TGG | 0.686176 | 4.2:+10204201 | MS.gene58172:CDS |
| AAAGATTCGAACTTCAAACG+AGG | 0.704807 | 4.2:-10204301 | None:intergenic |
| AGGCTAGAAAGATATGCAGG+TGG | 0.719348 | 4.2:+10204626 | MS.gene58172:CDS |
| TGTGTTGAAGAAGTTGATGG+CGG | 0.778803 | 4.2:+10203881 | MS.gene58172:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATATAACAATATATTA+TGG | - | chr4.2:10205670-10205689 | None:intergenic | 10.0% |
| !! | ATATATATGAATATTAATGT+AGG | + | chr4.2:10208403-10208422 | MS.gene58172:intron | 10.0% |
| !! | ATTATCATTATATTAATCTT+GGG | + | chr4.2:10204985-10205004 | MS.gene58172:intron | 10.0% |
| !! | ATTGTAACTTAAAAAAATTA+AGG | - | chr4.2:10205843-10205862 | None:intergenic | 10.0% |
| !! | TATTATCATTATATTAATCT+TGG | + | chr4.2:10204984-10205003 | MS.gene58172:intron | 10.0% |
| !! | TTCATATATATACATTAAAT+TGG | - | chr4.2:10208394-10208413 | None:intergenic | 10.0% |
| !!! | AAATAATTTCTCTATATTTT+GGG | + | chr4.2:10206371-10206390 | MS.gene58172:intron | 10.0% |
| !!! | TAAATAATTTCTCTATATTT+TGG | + | chr4.2:10206370-10206389 | MS.gene58172:intron | 10.0% |
| !!! | TTTTAAGTTACAATTAATTT+TGG | + | chr4.2:10205849-10205868 | MS.gene58172:intron | 10.0% |
| !! | AAAATAGTTTAATGTTGATA+TGG | + | chr4.2:10206977-10206996 | MS.gene58172:intron | 15.0% |
| !! | AATTAAAAACTAATTGTTCA+AGG | - | chr4.2:10206560-10206579 | None:intergenic | 15.0% |
| !! | ATAACAATATATTATGGATA+TGG | - | chr4.2:10205664-10205683 | None:intergenic | 15.0% |
| !! | CAAACAAATATTGAAAAATT+TGG | + | chr4.2:10205391-10205410 | MS.gene58172:intron | 15.0% |
| !! | GGAAAAATAAATATTTAAAG+AGG | + | chr4.2:10205870-10205889 | MS.gene58172:intron | 15.0% |
| !! | TACATAATATATACAATACA+AGG | + | chr4.2:10206137-10206156 | MS.gene58172:intron | 15.0% |
| !! | TGTAAATTCATAAAAATGAT+TGG | - | chr4.2:10207052-10207071 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTCTATTACTA+TGG | + | chr4.2:10203607-10203626 | MS.gene58172:CDS | 15.0% |
| !!! | ATATATATATGATTTGTTGA+CGG | + | chr4.2:10207180-10207199 | MS.gene58172:intron | 15.0% |
| !!! | ATTTAAAAATTTTGATGAAG+TGG | - | chr4.2:10207649-10207668 | None:intergenic | 15.0% |
| !!! | GTTATGTTTTTTTTTTTTTG+TGG | - | chr4.2:10206182-10206201 | None:intergenic | 15.0% |
| !!! | GTTTGAAATATTCAAATATA+TGG | + | chr4.2:10206414-10206433 | MS.gene58172:intron | 15.0% |
| !!! | TTATGATTGAATATTTTTCA+AGG | - | chr4.2:10207108-10207127 | None:intergenic | 15.0% |
| !! | AATATATACAATACAAGGTT+CGG | + | chr4.2:10206142-10206161 | MS.gene58172:intron | 20.0% |
| !! | AGTTATATAGTTTGAACATT+AGG | + | chr4.2:10205706-10205725 | MS.gene58172:intron | 20.0% |
| !! | ATAAAAAAAATTACGTGCTT+AGG | - | chr4.2:10205902-10205921 | None:intergenic | 20.0% |
| !! | ATAACATCATCAATACAATT+TGG | + | chr4.2:10206197-10206216 | MS.gene58172:intron | 20.0% |
| !! | ATATGAATATTAATGTAGGT+AGG | + | chr4.2:10208407-10208426 | MS.gene58172:intron | 20.0% |
| !! | ATGTAAATGCTTTACAATAT+TGG | + | chr4.2:10204696-10204715 | MS.gene58172:CDS | 20.0% |
| !! | CAATACAATCTTGAAATTAT+AGG | + | chr4.2:10206899-10206918 | MS.gene58172:intron | 20.0% |
| !! | CAATGTTCTTAAAATTAGAA+GGG | - | chr4.2:10206306-10206325 | None:intergenic | 20.0% |
| !! | GTTTCAAAAAAAAATACACA+TGG | - | chr4.2:10207252-10207271 | None:intergenic | 20.0% |
| !! | TTCTATACTTGTTCAAAATA+CGG | - | chr4.2:10204826-10204845 | None:intergenic | 20.0% |
| !! | TTGCAATAAAATTTACCAAT+AGG | - | chr4.2:10204914-10204933 | None:intergenic | 20.0% |
| !!! | CAAAAGTCTATTTCATTTTT+AGG | + | chr4.2:10206866-10206885 | MS.gene58172:intron | 20.0% |
| !!! | CTTATTTAGATCATATTTTG+CGG | + | chr4.2:10204143-10204162 | MS.gene58172:CDS | 20.0% |
| !!! | GTAATTTTTTGTTATATCAC+AGG | - | chr4.2:10207410-10207429 | None:intergenic | 20.0% |
| !!! | TCTTTGATTTAAATTGTCAT+AGG | + | chr4.2:10204586-10204605 | MS.gene58172:intron | 20.0% |
| !!! | TGTATTTGTTGTGATAATTA+TGG | - | chr4.2:10206266-10206285 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTTTTTTGTGGT+CGG | - | chr4.2:10206178-10206197 | None:intergenic | 20.0% |
| !!! | TTAAAATGTTTTTCTAGAGA+TGG | - | chr4.2:10203731-10203750 | None:intergenic | 20.0% |
| !!! | TTTTTCAATATTTGTTTGCT+TGG | - | chr4.2:10205389-10205408 | None:intergenic | 20.0% |
| ! | AAGTATCTGTACGAAAAATT+AGG | + | chr4.2:10204325-10204344 | MS.gene58172:CDS | 25.0% |
| ! | ACAGCATATATTAGATTAAG+AGG | + | chr4.2:10207270-10207289 | MS.gene58172:intron | 25.0% |
| ! | AGTAGATTCAGAAATTATGT+TGG | - | chr4.2:10204107-10204126 | None:intergenic | 25.0% |
| ! | ATATATACAATACAAGGTTC+GGG | + | chr4.2:10206143-10206162 | MS.gene58172:intron | 25.0% |
| ! | ATGAAATGGAAAAAAGTCTA+GGG | + | chr4.2:10208327-10208346 | MS.gene58172:intron | 25.0% |
| ! | ATTGAGGAGACAAAAAAAAT+TGG | + | chr4.2:10205042-10205061 | MS.gene58172:intron | 25.0% |
| ! | CCAATGTTCTTAAAATTAGA+AGG | - | chr4.2:10206307-10206326 | None:intergenic | 25.0% |
| ! | CTCATTAAAAGAAGCAAATT+TGG | - | chr4.2:10203291-10203310 | None:intergenic | 25.0% |
| ! | GAAAAATTTGGTACATACTA+GGG | + | chr4.2:10205403-10205422 | MS.gene58172:intron | 25.0% |
| ! | TCTAAATAAGTATGCAATGT+AGG | - | chr4.2:10204133-10204152 | None:intergenic | 25.0% |
| ! | TGAAAAATTTGGTACATACT+AGG | + | chr4.2:10205402-10205421 | MS.gene58172:intron | 25.0% |
| ! | TGATGTTGACATTTATTCTA+AGG | + | chr4.2:10205625-10205644 | MS.gene58172:intron | 25.0% |
| ! | TTATACACATGGTAATAATG+AGG | - | chr4.2:10208360-10208379 | None:intergenic | 25.0% |
| !! | AAAAAGAAGAAAAAGTACGA+TGG | - | chr4.2:10206617-10206636 | None:intergenic | 25.0% |
| !! | AACATTTTCACCATACAATT+TGG | + | chr4.2:10206225-10206244 | MS.gene58172:intron | 25.0% |
| !! | ATTGTTACAAAGTCCAATTT+TGG | - | chr4.2:10208186-10208205 | None:intergenic | 25.0% |
| !! | ATTTTGCTACATTATACACA+TGG | - | chr4.2:10208371-10208390 | None:intergenic | 25.0% |
| !! | TACTTTAACAGCTCATTTTA+TGG | + | chr4.2:10203466-10203485 | MS.gene58172:CDS | 25.0% |
| !! | TTGTTACAAAGTCCAATTTT+GGG | - | chr4.2:10208185-10208204 | None:intergenic | 25.0% |
| !! | TTTTTCCATTTCATCTCATA+AGG | - | chr4.2:10208321-10208340 | None:intergenic | 25.0% |
| !!! | AACTACTTTTAAATCGTACA+TGG | - | chr4.2:10207019-10207038 | None:intergenic | 25.0% |
| !!! | AAGAGTATTATATCCTTTCA+AGG | + | chr4.2:10204732-10204751 | MS.gene58172:CDS | 25.0% |
| !!! | ATTTTTTGTTATATCACAGG+AGG | - | chr4.2:10207407-10207426 | None:intergenic | 25.0% |
| !!! | CAAATTTGCTTCTTTTAATG+AGG | + | chr4.2:10203289-10203308 | MS.gene58172:CDS | 25.0% |
| !!! | CCTTCTAATTTTAAGAACAT+TGG | + | chr4.2:10206304-10206323 | MS.gene58172:intron | 25.0% |
| !!! | GTATCTATTTTTCAGTTTCA+GGG | + | chr4.2:10208439-10208458 | MS.gene58172:intron | 25.0% |
| !!! | GTTTTTAATTAGCATTAGCA+TGG | + | chr4.2:10206570-10206589 | MS.gene58172:intron | 25.0% |
| !!! | GTTTTTTTTTTTTTGTGGTC+GGG | - | chr4.2:10206177-10206196 | None:intergenic | 25.0% |
| !!! | TATCTATTTTTCAGTTTCAG+GGG | + | chr4.2:10208440-10208459 | MS.gene58172:intron | 25.0% |
| !!! | TGTATCTATTTTTCAGTTTC+AGG | + | chr4.2:10208438-10208457 | MS.gene58172:intron | 25.0% |
| AAAACCGAAGATTCATAGAT+TGG | + | chr4.2:10205114-10205133 | MS.gene58172:intron | 30.0% | |
| AAAAGCAAAGAATCAGTTGA+AGG | + | chr4.2:10208512-10208531 | MS.gene58172:CDS | 30.0% | |
| AAATGCGATAACAAACAATG+CGG | + | chr4.2:10207786-10207805 | MS.gene58172:intron | 30.0% | |
| AATATAACCATGAGAAGAAG+CGG | - | chr4.2:10203447-10203466 | None:intergenic | 30.0% | |
| AATCCATAAGACAAAAGAGA+AGG | + | chr4.2:10208571-10208590 | MS.gene58172:CDS | 30.0% | |
| AGTTGTTTGCTCAACAATTA+TGG | + | chr4.2:10205596-10205615 | MS.gene58172:intron | 30.0% | |
| ATAAGTAGAAACCCATTTAC+CGG | - | chr4.2:10203939-10203958 | None:intergenic | 30.0% | |
| ATACAAAATCCTAGAACTTC+TGG | - | chr4.2:10205270-10205289 | None:intergenic | 30.0% | |
| ATGTTTGACACCAAATTGTA+TGG | - | chr4.2:10206210-10206229 | None:intergenic | 30.0% | |
| CAATTAAATTGTTCTCCCAA+AGG | + | chr4.2:10208219-10208238 | MS.gene58172:intron | 30.0% | |
| CATTTCAAATCATGCAGAAA+AGG | + | chr4.2:10206336-10206355 | MS.gene58172:intron | 30.0% | |
| CTACAAACTTACTCCAAATT+TGG | - | chr4.2:10206841-10206860 | None:intergenic | 30.0% | |
| GAAAGTTTACTTGCTTGAAA+AGG | + | chr4.2:10203352-10203371 | MS.gene58172:CDS | 30.0% | |
| GACAAGTATATGAGTGAATA+TGG | + | chr4.2:10204247-10204266 | MS.gene58172:CDS | 30.0% | |
| GATGAAATGGAAAAAAGTCT+AGG | + | chr4.2:10208326-10208345 | MS.gene58172:intron | 30.0% | |
| GCTCTCATAATTGGTTATTT+GGG | + | chr4.2:10204882-10204901 | MS.gene58172:intron | 30.0% | |
| GGATAAATTGAAAAAACAGC+TGG | + | chr4.2:10203373-10203392 | MS.gene58172:CDS | 30.0% | |
| GTATTATATCCTTTCAAGGT+TGG | + | chr4.2:10204736-10204755 | MS.gene58172:intron | 30.0% | |
| GTCATAGGAATATGTTGAAA+AGG | + | chr4.2:10204601-10204620 | MS.gene58172:intron | 30.0% | |
| GTGTTTATAATCCTCAGATA+CGG | + | chr4.2:10205221-10205240 | MS.gene58172:intron | 30.0% | |
| TACAGAGACAGTAAAAGATA+AGG | + | chr4.2:10204354-10204373 | MS.gene58172:CDS | 30.0% | |
| TATATACAATACAAGGTTCG+GGG | + | chr4.2:10206144-10206163 | MS.gene58172:intron | 30.0% | |
| TATATGTCTGACTTTAGACA+TGG | - | chr4.2:10207159-10207178 | None:intergenic | 30.0% | |
| TATCAACACACAGATCAATT+TGG | + | chr4.2:10205012-10205031 | MS.gene58172:intron | 30.0% | |
| TATGGATGATCAATGGAATT+TGG | + | chr4.2:10203484-10203503 | MS.gene58172:CDS | 30.0% | |
| TATGGTTGAAGAGAGTTTAA+AGG | + | chr4.2:10203775-10203794 | MS.gene58172:CDS | 30.0% | |
| TGAAATTGATGCAACTTTGT+TGG | - | chr4.2:10204425-10204444 | None:intergenic | 30.0% | |
| TGCTCTCATAATTGGTTATT+TGG | + | chr4.2:10204881-10204900 | MS.gene58172:intron | 30.0% | |
| TGTCAGTTAGTAATTTGGAA+AGG | - | chr4.2:10206732-10206751 | None:intergenic | 30.0% | |
| TTAAACTCTCTTCAACCATA+AGG | - | chr4.2:10203775-10203794 | None:intergenic | 30.0% | |
| TTAAAGCTCTTTGCTTGATT+TGG | - | chr4.2:10207728-10207747 | None:intergenic | 30.0% | |
| TTATAGGATGCTTGAGAATT+TGG | - | chr4.2:10208099-10208118 | None:intergenic | 30.0% | |
| TTCAATTAGATTACCTGTGA+GGG | + | chr4.2:10204441-10204460 | MS.gene58172:CDS | 30.0% | |
| TTTCAATTAGATTACCTGTG+AGG | + | chr4.2:10204440-10204459 | MS.gene58172:CDS | 30.0% | |
| TTTGTTTGCTTGGATCATTT+AGG | - | chr4.2:10205379-10205398 | None:intergenic | 30.0% | |
| ! | ATTTTCTGTTTGGACATAGT+TGG | + | chr4.2:10205199-10205218 | MS.gene58172:intron | 30.0% |
| ! | CTCATTTTATGGATGATCAA+TGG | + | chr4.2:10203477-10203496 | MS.gene58172:CDS | 30.0% |
| ! | TATGGTATGATTCTTGCTTT+TGG | + | chr4.2:10204265-10204284 | MS.gene58172:CDS | 30.0% |
| ! | TGTTACAAAGTCCAATTTTG+GGG | - | chr4.2:10208184-10208203 | None:intergenic | 30.0% |
| ! | TTTTTCTTTTTTCCTCCCAA+AGG | + | chr4.2:10205294-10205313 | MS.gene58172:intron | 30.0% |
| !!! | AGAAGTTCTAGGATTTTGTA+TGG | + | chr4.2:10205269-10205288 | MS.gene58172:intron | 30.0% |
| !!! | ATGATAGTTTTGAGCTATCA+AGG | + | chr4.2:10203546-10203565 | MS.gene58172:CDS | 30.0% |
| !!! | GAAGTTCTAGGATTTTGTAT+GGG | + | chr4.2:10205270-10205289 | MS.gene58172:intron | 30.0% |
| !!! | GGATTTTTTAAGCAGAGAAA+CGG | - | chr4.2:10206755-10206774 | None:intergenic | 30.0% |
| !!! | TTGATTTTTCAAGTTTTGCG+AGG | - | chr4.2:10203657-10203676 | None:intergenic | 30.0% |
| AAAAATCCCATGAAAGCTCT+TGG | + | chr4.2:10206767-10206786 | MS.gene58172:CDS | 35.0% | |
| AAAACTGCATCTGAAGATCA+TGG | - | chr4.2:10206813-10206832 | None:intergenic | 35.0% | |
| AAAATCCCATGAAAGCTCTT+GGG | + | chr4.2:10206768-10206787 | MS.gene58172:CDS | 35.0% | |
| AAAGATTCGAACTTCAAACG+AGG | - | chr4.2:10204304-10204323 | None:intergenic | 35.0% | |
| AAAGGTAGTAAGTGGTGTAT+TGG | + | chr4.2:10203793-10203812 | MS.gene58172:CDS | 35.0% | |
| AAATCAGCAGCTGAATTTGT+TGG | + | chr4.2:10208542-10208561 | MS.gene58172:CDS | 35.0% | |
| AAATTGTTCTCCCAAAGGAA+AGG | + | chr4.2:10208224-10208243 | MS.gene58172:intron | 35.0% | |
| AACAAAGACAGCCTAACTAT+CGG | + | chr4.2:10207381-10207400 | MS.gene58172:intron | 35.0% | |
| ACACATGGTAATAATGAGGT+GGG | - | chr4.2:10208356-10208375 | None:intergenic | 35.0% | |
| AGACACTACAGATTCTGATA+AGG | + | chr4.2:10208598-10208617 | MS.gene58172:CDS | 35.0% | |
| AGATGACAAGATAAGAGACA+TGG | + | chr4.2:10204201-10204220 | MS.gene58172:CDS | 35.0% | |
| AGCATCCTTATGAGATGAAA+TGG | + | chr4.2:10208313-10208332 | MS.gene58172:intron | 35.0% | |
| AGCTCAAAACTATCATGTGA+AGG | - | chr4.2:10203542-10203561 | None:intergenic | 35.0% | |
| AGGAATATGTTGAAAAGGAG+AGG | + | chr4.2:10204606-10204625 | MS.gene58172:intron | 35.0% | |
| ATAGTTTGAACATTAGGTGC+TGG | + | chr4.2:10205712-10205731 | MS.gene58172:intron | 35.0% | |
| ATATAGACTTCCACAGTAGA+AGG | - | chr4.2:10205473-10205492 | None:intergenic | 35.0% | |
| ATCAAATACAACCGTATCTG+AGG | - | chr4.2:10205235-10205254 | None:intergenic | 35.0% | |
| ATGACATAATGGCGTTATCT+TGG | - | chr4.2:10207623-10207642 | None:intergenic | 35.0% | |
| ATTGATTGTTTGCAGGAATG+GGG | + | chr4.2:10203575-10203594 | MS.gene58172:CDS | 35.0% | |
| CAAACTTACTCCAAATTTGG+TGG | - | chr4.2:10206838-10206857 | None:intergenic | 35.0% | |
| CAATGTGTTGAAGAAGTTGA+TGG | + | chr4.2:10203878-10203897 | MS.gene58172:CDS | 35.0% | |
| CACAGTAGAAGGATAAAATC+AGG | - | chr4.2:10205462-10205481 | None:intergenic | 35.0% | |
| CCTTCCAATCTATGAATCTT+CGG | - | chr4.2:10205121-10205140 | None:intergenic | 35.0% | |
| CGGTTGTATTTGATCAAACA+TGG | + | chr4.2:10205241-10205260 | MS.gene58172:intron | 35.0% | |
| GAAACGTATGCTAAGGTATA+TGG | - | chr4.2:10206525-10206544 | None:intergenic | 35.0% | |
| GAGAGTTTAAAGGTAGTAAG+TGG | + | chr4.2:10203785-10203804 | MS.gene58172:CDS | 35.0% | |
| GATATGAGAAACGTATGCTA+AGG | - | chr4.2:10206532-10206551 | None:intergenic | 35.0% | |
| GATTGATTGTTTGCAGGAAT+GGG | + | chr4.2:10203574-10203593 | MS.gene58172:CDS | 35.0% | |
| GCTCAAAACTATCATGTGAA+GGG | - | chr4.2:10203541-10203560 | None:intergenic | 35.0% | |
| GGTTAATAATGAGGTGGTTT+GGG | - | chr4.2:10208270-10208289 | None:intergenic | 35.0% | |
| GTATTGGACAAGATAAGGAA+CGG | + | chr4.2:10203809-10203828 | MS.gene58172:CDS | 35.0% | |
| GTTGAGAACTTTCATCACAT+CGG | + | chr4.2:10203697-10203716 | MS.gene58172:CDS | 35.0% | |
| TACACATGGTAATAATGAGG+TGG | - | chr4.2:10208357-10208376 | None:intergenic | 35.0% | |
| TATCATGTGAAGGGTTGAAA+TGG | - | chr4.2:10203532-10203551 | None:intergenic | 35.0% | |
| TATTTGAAAGAGAGAGACAG+AGG | + | chr4.2:10204668-10204687 | MS.gene58172:CDS | 35.0% | |
| TGAGCTTAGTTCAATTGGTA+AGG | + | chr4.2:10206107-10206126 | MS.gene58172:intron | 35.0% | |
| TGATTGATTGTTTGCAGGAA+TGG | + | chr4.2:10203573-10203592 | MS.gene58172:CDS | 35.0% | |
| TGGTTAATAATGAGGTGGTT+TGG | - | chr4.2:10208271-10208290 | None:intergenic | 35.0% | |
| TGTGTTTGAGCTTTCATTGT+TGG | + | chr4.2:10203414-10203433 | MS.gene58172:CDS | 35.0% | |
| TGTTGAGTGGGATGAATTTA+GGG | + | chr4.2:10203259-10203278 | MS.gene58172:CDS | 35.0% | |
| TTCATCTCATAAGGATGCTA+GGG | - | chr4.2:10208312-10208331 | None:intergenic | 35.0% | |
| TTGTTGAGTGGGATGAATTT+AGG | + | chr4.2:10203258-10203277 | MS.gene58172:CDS | 35.0% | |
| TTTCATCTCATAAGGATGCT+AGG | - | chr4.2:10208313-10208332 | None:intergenic | 35.0% | |
| ! | AACGGTGTCAGTTAGTAATT+TGG | - | chr4.2:10206737-10206756 | None:intergenic | 35.0% |
| ! | CTGATTTTATCCTTCTACTG+TGG | + | chr4.2:10205460-10205479 | MS.gene58172:intron | 35.0% |
| ! | GTTACAAAGTCCAATTTTGG+GGG | - | chr4.2:10208183-10208202 | None:intergenic | 35.0% |
| ! | TCACCTTCTCTTTTGTCTTA+TGG | - | chr4.2:10208577-10208596 | None:intergenic | 35.0% |
| ! | TGTTATCGCATTTTGCTTGT+TGG | - | chr4.2:10207779-10207798 | None:intergenic | 35.0% |
| ! | TTATTTGGGTTCTCACCTAT+TGG | + | chr4.2:10204896-10204915 | MS.gene58172:intron | 35.0% |
| ! | TTGTGTTATGTGTGGTAATG+AGG | - | chr4.2:10207904-10207923 | None:intergenic | 35.0% |
| !! | TCCATTTCAGTTTGTTGAGT+GGG | + | chr4.2:10203247-10203266 | MS.gene58172:CDS | 35.0% |
| !! | TGAAGTGGTTGATGACATAA+TGG | - | chr4.2:10207634-10207653 | None:intergenic | 35.0% |
| !! | TGGTTTTTCTGGAGAATCTT+TGG | - | chr4.2:10206707-10206726 | None:intergenic | 35.0% |
| !! | TTCCATTTCAGTTTGTTGAG+TGG | + | chr4.2:10203246-10203265 | MS.gene58172:CDS | 35.0% |
| !! | TTTTTCAGTTTCAGGGGAAA+AGG | + | chr4.2:10208446-10208465 | MS.gene58172:intron | 35.0% |
| !!! | AATCTTCGGTTTTGTTCTGA+TGG | - | chr4.2:10205107-10205126 | None:intergenic | 35.0% |
| !!! | GTAAGGTTTTTTCTTCGCTT+TGG | - | chr4.2:10208043-10208062 | None:intergenic | 35.0% |
| !!! | TAGTTTTGAGCTATCAAGGA+AGG | + | chr4.2:10203550-10203569 | MS.gene58172:CDS | 35.0% |
| !!! | TTTGTTGTTTTGCGCCTAAT+AGG | - | chr4.2:10207337-10207356 | None:intergenic | 35.0% |
| AAGATAAGGTGAGCAATGTG+AGG | + | chr4.2:10204368-10204387 | MS.gene58172:CDS | 40.0% | |
| AAGCCAACTGTTACAAGGAA+AGG | + | chr4.2:10207311-10207330 | MS.gene58172:intron | 40.0% | |
| ACATGGATTCCAGAAGTTCT+AGG | + | chr4.2:10205258-10205277 | MS.gene58172:intron | 40.0% | |
| ACCACACATAACACAAAGAG+TGG | + | chr4.2:10207908-10207927 | MS.gene58172:intron | 40.0% | |
| ACCACGTAGAACGTGTTAAA+AGG | + | chr4.2:10206464-10206483 | MS.gene58172:intron | 40.0% | |
| ATGTGAGTGTGTCAAACTCT+AGG | + | chr4.2:10203840-10203859 | MS.gene58172:CDS | 40.0% | |
| CACATGGTAATAATGAGGTG+GGG | - | chr4.2:10208355-10208374 | None:intergenic | 40.0% | |
| CACGTAGAACGTGTTAAAAG+GGG | + | chr4.2:10206466-10206485 | MS.gene58172:intron | 40.0% | |
| CATCATGTCTCTTCTATGAG+TGG | - | chr4.2:10207572-10207591 | None:intergenic | 40.0% | |
| CATCGTGAGCTTAGTTCAAT+TGG | + | chr4.2:10206102-10206121 | MS.gene58172:intron | 40.0% | |
| CATCTTACGCCAAATCTTCA+AGG | + | chr4.2:10207839-10207858 | MS.gene58172:intron | 40.0% | |
| CCACGTAGAACGTGTTAAAA+GGG | + | chr4.2:10206465-10206484 | MS.gene58172:intron | 40.0% | |
| CCGAAGATTCATAGATTGGA+AGG | + | chr4.2:10205118-10205137 | MS.gene58172:intron | 40.0% | |
| CTCTCGTATGCTCTCATAAT+TGG | + | chr4.2:10204873-10204892 | MS.gene58172:intron | 40.0% | |
| CTGATGCTACTGCGATTAAT+GGG | - | chr4.2:10204781-10204800 | None:intergenic | 40.0% | |
| GAAGATTTGGCGTAAGATGT+TGG | - | chr4.2:10207838-10207857 | None:intergenic | 40.0% | |
| GAAGGTGATTGATTGTTTGC+AGG | + | chr4.2:10203568-10203587 | MS.gene58172:CDS | 40.0% | |
| GATTGGAAGGACAACTGATT+TGG | + | chr4.2:10205131-10205150 | MS.gene58172:intron | 40.0% | |
| GTGGTGTATTGGACAAGATA+AGG | + | chr4.2:10203804-10203823 | MS.gene58172:CDS | 40.0% | |
| GTTACAAGGAAAGGCCTATT+AGG | + | chr4.2:10207320-10207339 | MS.gene58172:intron | 40.0% | |
| GTTAGTAATTTGGAAAGGCG+TGG | - | chr4.2:10206727-10206746 | None:intergenic | 40.0% | |
| GTTGAGTGGGATGAATTTAG+GGG | + | chr4.2:10203260-10203279 | MS.gene58172:CDS | 40.0% | |
| TAGGAGCTTAGCTAACTTCA+AGG | + | chr4.2:10205744-10205763 | MS.gene58172:intron | 40.0% | |
| TAGGATGCTTGAGAATTTGG+TGG | - | chr4.2:10208096-10208115 | None:intergenic | 40.0% | |
| TCAATTTGGAGACGAGATTG+AGG | + | chr4.2:10205026-10205045 | MS.gene58172:intron | 40.0% | |
| TCCACTCTTTGTGTTATGTG+TGG | - | chr4.2:10207912-10207931 | None:intergenic | 40.0% | |
| TCCCACTCAACAAACTGAAA+TGG | - | chr4.2:10203251-10203270 | None:intergenic | 40.0% | |
| TCTGATGCTACTGCGATTAA+TGG | - | chr4.2:10204782-10204801 | None:intergenic | 40.0% | |
| TGCAAAAGCCAACTGTTACA+AGG | + | chr4.2:10207306-10207325 | MS.gene58172:intron | 40.0% | |
| TGTGAATATGGAAGAGGGTA+AGG | - | chr4.2:10208060-10208079 | None:intergenic | 40.0% | |
| TTGGATCATTTAGGCACACA+AGG | - | chr4.2:10205370-10205389 | None:intergenic | 40.0% | |
| TTGTTCAAAATACGGTTGCC+AGG | - | chr4.2:10204818-10204837 | None:intergenic | 40.0% | |
| TTTAACACGTTCTACGTGGT+GGG | - | chr4.2:10206464-10206483 | None:intergenic | 40.0% | |
| TTTCTCCCAAGAGCTTTCAT+GGG | - | chr4.2:10206776-10206795 | None:intergenic | 40.0% | |
| TTTGGCGTAAGATGTTGGAT+TGG | - | chr4.2:10207833-10207852 | None:intergenic | 40.0% | |
| TTTGGTCAATTTGGAAGGAG+AGG | - | chr4.2:10207695-10207714 | None:intergenic | 40.0% | |
| ! | AAGGAAGACAGACTTGCTTT+CGG | + | chr4.2:10204486-10204505 | MS.gene58172:CDS | 40.0% |
| ! | ATATCCTTTCAAGGTTGGCT+AGG | + | chr4.2:10204741-10204760 | MS.gene58172:intron | 40.0% |
| ! | GAGAATCTTTGGCCACATTT+TGG | - | chr4.2:10206696-10206715 | None:intergenic | 40.0% |
| ! | GCAGTTTTCACCACCAAATT+TGG | + | chr4.2:10206825-10206844 | MS.gene58172:CDS | 40.0% |
| ! | GGATTCTCGTTTTACTTCTC+GGG | + | chr4.2:10204462-10204481 | MS.gene58172:CDS | 40.0% |
| ! | GGGATTCTCGTTTTACTTCT+CGG | + | chr4.2:10204461-10204480 | MS.gene58172:CDS | 40.0% |
| ! | GGGTTTGGTTAATAATGAGG+TGG | - | chr4.2:10208276-10208295 | None:intergenic | 40.0% |
| ! | GTGGGGTTTGGTTAATAATG+AGG | - | chr4.2:10208279-10208298 | None:intergenic | 40.0% |
| ! | TAATGGCGTTATCTTGGTGT+TGG | - | chr4.2:10207617-10207636 | None:intergenic | 40.0% |
| ! | TATCCTTTCAAGGTTGGCTA+GGG | + | chr4.2:10204742-10204761 | MS.gene58172:intron | 40.0% |
| ! | TCAGAATCTCCTTTTAGTCC+TGG | + | chr4.2:10204797-10204816 | MS.gene58172:intron | 40.0% |
| ! | TTAGCTAACTTCAAGGCACT+TGG | + | chr4.2:10205751-10205770 | MS.gene58172:intron | 40.0% |
| ! | TTCACCCATATCTAGCCTTT+GGG | - | chr4.2:10205312-10205331 | None:intergenic | 40.0% |
| ! | TTTTAACACGTTCTACGTGG+TGG | - | chr4.2:10206465-10206484 | None:intergenic | 40.0% |
| ! | TTTTCTCCCAAGAGCTTTCA+TGG | - | chr4.2:10206777-10206796 | None:intergenic | 40.0% |
| !! | GCTAAGGTATATGGCTTGTT+TGG | - | chr4.2:10206516-10206535 | None:intergenic | 40.0% |
| !! | TGCAGACTTGTTACTTGATG+TGG | + | chr4.2:10205170-10205189 | MS.gene58172:intron | 40.0% |
| !! | TGTGTTGAAGAAGTTGATGG+CGG | + | chr4.2:10203881-10203900 | MS.gene58172:CDS | 40.0% |
| !!! | GTGGCTACTGATTTTCTGTT+TGG | + | chr4.2:10205189-10205208 | MS.gene58172:intron | 40.0% |
| AAAACAGCTGGCTGCAGTTA+AGG | + | chr4.2:10203385-10203404 | MS.gene58172:CDS | 45.0% | |
| AAACAGCTGGCTGCAGTTAA+GGG | + | chr4.2:10203386-10203405 | MS.gene58172:CDS | 45.0% | |
| ACTTCTTCCGCTTCTTCTCA+TGG | + | chr4.2:10203437-10203456 | MS.gene58172:CDS | 45.0% | |
| AGAACGTGTTAAAAGGGGAG+AGG | + | chr4.2:10206471-10206490 | MS.gene58172:intron | 45.0% | |
| AGGCCTTTCCTTGTAACAGT+TGG | - | chr4.2:10207317-10207336 | None:intergenic | 45.0% | |
| AGGCTAGAAAGATATGCAGG+TGG | + | chr4.2:10204626-10204645 | MS.gene58172:CDS | 45.0% | |
| AGGGGAAAAGGAGAACATGA+AGG | + | chr4.2:10208458-10208477 | MS.gene58172:CDS | 45.0% | |
| ATACGGTTGCCAGGACTAAA+AGG | - | chr4.2:10204809-10204828 | None:intergenic | 45.0% | |
| ATCCGAGAGATTGTTTGAGG+AGG | - | chr4.2:10207542-10207561 | None:intergenic | 45.0% | |
| ATGTGGATGTGTCCGGTAAA+TGG | + | chr4.2:10203924-10203943 | MS.gene58172:CDS | 45.0% | |
| CCTCACAGTGCAAGAAAAGA+TGG | + | chr4.2:10207865-10207884 | MS.gene58172:intron | 45.0% | |
| CGCAGTGCATTTGAACACAT+GGG | + | chr4.2:10203986-10204005 | MS.gene58172:CDS | 45.0% | |
| GAGAGGCTAGAAAGATATGC+AGG | + | chr4.2:10204623-10204642 | MS.gene58172:CDS | 45.0% | |
| GAGGAGACAACCTTTCCTTT+GGG | - | chr4.2:10208237-10208256 | None:intergenic | 45.0% | |
| GCAAAACAACAAACACACGC+AGG | + | chr4.2:10207344-10207363 | MS.gene58172:intron | 45.0% | |
| GGAATCCGAGAGATTGTTTG+AGG | - | chr4.2:10207545-10207564 | None:intergenic | 45.0% | |
| GGAGTGAATCGAGTAATTCG+CGG | - | chr4.2:10207758-10207777 | None:intergenic | 45.0% | |
| GTAAAACGAGAATCCCTCAC+AGG | - | chr4.2:10204457-10204476 | None:intergenic | 45.0% | |
| GTCCTCCTCAAACAATCTCT+CGG | + | chr4.2:10207537-10207556 | MS.gene58172:intron | 45.0% | |
| GTCTCTTCTATGAGTGGACA+TGG | - | chr4.2:10207566-10207585 | None:intergenic | 45.0% | |
| TCATAAGGATGCTAGGGTGA+GGG | - | chr4.2:10208306-10208325 | None:intergenic | 45.0% | |
| TCCTCCCAAAGGCTAGATAT+GGG | + | chr4.2:10205305-10205324 | MS.gene58172:intron | 45.0% | |
| TCGCAGTGCATTTGAACACA+TGG | + | chr4.2:10203985-10204004 | MS.gene58172:CDS | 45.0% | |
| TGATGAAGGTGGCCAAAATG+TGG | + | chr4.2:10206681-10206700 | MS.gene58172:CDS | 45.0% | |
| TGTGGATGTGTCCGGTAAAT+GGG | + | chr4.2:10203925-10203944 | MS.gene58172:CDS | 45.0% | |
| TGTTTGAGGAGGACAGCTTA+GGG | - | chr4.2:10207531-10207550 | None:intergenic | 45.0% | |
| TTCCTCCCAAAGGCTAGATA+TGG | + | chr4.2:10205304-10205323 | MS.gene58172:intron | 45.0% | |
| TTGTTTGAGGAGGACAGCTT+AGG | - | chr4.2:10207532-10207551 | None:intergenic | 45.0% | |
| TTTCCCACTCTTCACTGGAT+GGG | - | chr4.2:10204039-10204058 | None:intergenic | 45.0% | |
| TTTGTGTAGCAGCACTGTGT+GGG | - | chr4.2:10207432-10207451 | None:intergenic | 45.0% | |
| ! | AATTTGGTGGTTGAGGAGGA+GGG | - | chr4.2:10208083-10208102 | None:intergenic | 45.0% |
| ! | CCATCTTTTCTTGCACTGTG+AGG | - | chr4.2:10207868-10207887 | None:intergenic | 45.0% |
| ! | CCCTTTTAACACGTTCTACG+TGG | - | chr4.2:10206468-10206487 | None:intergenic | 45.0% |
| ! | CTCGTTTTACTTCTCGGGAA+AGG | + | chr4.2:10204467-10204486 | MS.gene58172:CDS | 45.0% |
| ! | CTTCACCCATATCTAGCCTT+TGG | - | chr4.2:10205313-10205332 | None:intergenic | 45.0% |
| ! | GAGGGTGTGAATATGGAAGA+GGG | - | chr4.2:10208065-10208084 | None:intergenic | 45.0% |
| ! | GCTTGAGAATTTGGTGGTTG+AGG | - | chr4.2:10208090-10208109 | None:intergenic | 45.0% |
| ! | GGGGATTTGGTCAATTTGGA+AGG | - | chr4.2:10207700-10207719 | None:intergenic | 45.0% |
| ! | TAAGTGTTGTGCTCGTGTCT+TGG | + | chr4.2:10203748-10203767 | MS.gene58172:CDS | 45.0% |
| ! | TCTTTTCTTGCACTGTGAGG+TGG | - | chr4.2:10207865-10207884 | None:intergenic | 45.0% |
| ! | TGAGAATTTGGTGGTTGAGG+AGG | - | chr4.2:10208087-10208106 | None:intergenic | 45.0% |
| !! | AAGTCCAATTTTGGGGGAAG+AGG | - | chr4.2:10208177-10208196 | None:intergenic | 45.0% |
| !! | GCGTAAGATGTTGGATTGGT+TGG | - | chr4.2:10207829-10207848 | None:intergenic | 45.0% |
| !! | GGAAGGACAACTGATTTGGT+TGG | + | chr4.2:10205135-10205154 | MS.gene58172:intron | 45.0% |
| !! | TCTTTGCTTGATTTGGCACG+CGG | - | chr4.2:10207721-10207740 | None:intergenic | 45.0% |
| !! | TTCTTCGCTTTGGAAGAGTC+CGG | - | chr4.2:10208033-10208052 | None:intergenic | 45.0% |
| !! | TTGGAAAGGCGTGGTTTTTC+TGG | - | chr4.2:10206718-10206737 | None:intergenic | 45.0% |
| ACAAACATGTCCACCTTGCC+CGG | + | chr4.2:10207447-10207466 | MS.gene58172:intron | 50.0% | |
| ATCACAGGAGGCCGATAGTT+AGG | - | chr4.2:10207395-10207414 | None:intergenic | 50.0% | |
| ATTGCCCATCCAGTGAAGAG+TGG | + | chr4.2:10204032-10204051 | MS.gene58172:CDS | 50.0% | |
| CAGGGGTTACATGCTGGAAT+TGG | - | chr4.2:10206657-10206676 | None:intergenic | 50.0% | |
| CATCCCTAGCCAACCTTGAA+AGG | - | chr4.2:10204748-10204767 | None:intergenic | 50.0% | |
| CCAAGAGAAAGCCACAACCT+TGG | + | chr4.2:10208001-10208020 | MS.gene58172:intron | 50.0% | |
| CCAAGGTTGTGGCTTTCTCT+TGG | - | chr4.2:10208004-10208023 | None:intergenic | 50.0% | |
| CTCATAAGGATGCTAGGGTG+AGG | - | chr4.2:10208307-10208326 | None:intergenic | 50.0% | |
| CTGTTATGGACAGGCGTGTT+TGG | - | chr4.2:10207504-10207523 | None:intergenic | 50.0% | |
| CTTTCCCACTCTTCACTGGA+TGG | - | chr4.2:10204040-10204059 | None:intergenic | 50.0% | |
| GAGAAAGCCACAACCTTGGA+CGG | + | chr4.2:10208005-10208024 | MS.gene58172:intron | 50.0% | |
| GGAGGAGACAACCTTTCCTT+TGG | - | chr4.2:10208238-10208257 | None:intergenic | 50.0% | |
| GGGACTTCCATCTTGCATGT+CGG | - | chr4.2:10206444-10206463 | None:intergenic | 50.0% | |
| GGTTGTGGCTTTCTCTTGGT+TGG | - | chr4.2:10208000-10208019 | None:intergenic | 50.0% | |
| GTGAATCGAGTAATTCGCGG+CGG | - | chr4.2:10207755-10207774 | None:intergenic | 50.0% | |
| GTTTGAGGAGGACAGCTTAG+GGG | - | chr4.2:10207530-10207549 | None:intergenic | 50.0% | |
| GTTTGTGTAGCAGCACTGTG+TGG | - | chr4.2:10207433-10207452 | None:intergenic | 50.0% | |
| TCCAGTGAAGAGTGGGAAAG+AGG | + | chr4.2:10204040-10204059 | MS.gene58172:CDS | 50.0% | |
| TCCTCCTCTTCCCCCAAAAT+TGG | + | chr4.2:10208170-10208189 | MS.gene58172:intron | 50.0% | |
| TCCTCTTTCCCACTCTTCAC+TGG | - | chr4.2:10204044-10204063 | None:intergenic | 50.0% | |
| TGCTCGTGTCTTGGACCTTA+TGG | + | chr4.2:10203757-10203776 | MS.gene58172:CDS | 50.0% | |
| TTGCCCATCCAGTGAAGAGT+GGG | + | chr4.2:10204033-10204052 | MS.gene58172:CDS | 50.0% | |
| TTTGGAAGGAGAGGAATGCG+AGG | - | chr4.2:10207686-10207705 | None:intergenic | 50.0% | |
| ! | AACACAAAGAGTGGACTCCC+CGG | + | chr4.2:10207917-10207936 | MS.gene58172:intron | 50.0% |
| ! | ACCCATATCTAGCCTTTGGG+AGG | - | chr4.2:10205309-10205328 | None:intergenic | 50.0% |
| ! | ACGCGGGGATTTGGTCAATT+TGG | - | chr4.2:10207704-10207723 | None:intergenic | 50.0% |
| ! | AGGTGGTTTGGGAGCTTGAT+TGG | - | chr4.2:10208259-10208278 | None:intergenic | 50.0% |
| ! | GAATTTGGTGGTTGAGGAGG+AGG | - | chr4.2:10208084-10208103 | None:intergenic | 50.0% |
| ! | GGAGGGTGTGAATATGGAAG+AGG | - | chr4.2:10208066-10208085 | None:intergenic | 50.0% |
| ! | GTGAGGTGGCCTTGAAGATT+TGG | - | chr4.2:10207851-10207870 | None:intergenic | 50.0% |
| ! | TAGTAGCGATGGCTTGCATG+TGG | + | chr4.2:10203907-10203926 | MS.gene58172:CDS | 50.0% |
| ! | TGAGGAGGAGGGTGTGAATA+TGG | - | chr4.2:10208072-10208091 | None:intergenic | 50.0% |
| ! | TGGTTTGGGAGCTTGATTGG+AGG | - | chr4.2:10208256-10208275 | None:intergenic | 50.0% |
| ! | TTGGTGTTTCTGCTGACTGC+AGG | - | chr4.2:10207485-10207504 | None:intergenic | 50.0% |
| !! | ACTCGGTGCGCTCTTCTTAT+AGG | - | chr4.2:10208115-10208134 | None:intergenic | 50.0% |
| !! | CTTGGTGTTGGTCGTTGAGT+AGG | - | chr4.2:10207605-10207624 | None:intergenic | 50.0% |
| !! | CTTTGCTTGATTTGGCACGC+GGG | - | chr4.2:10207720-10207739 | None:intergenic | 50.0% |
| !! | TAGGTGCTGGCTCAGTAGTT+AGG | + | chr4.2:10205725-10205744 | MS.gene58172:intron | 50.0% |
| !! | TCCAATTTTGGGGGAAGAGG+AGG | - | chr4.2:10208174-10208193 | None:intergenic | 50.0% |
| !! | TTTGCTTGATTTGGCACGCG+GGG | - | chr4.2:10207719-10207738 | None:intergenic | 50.0% |
| AAGAGGAGGACAAGTGGGTG+TGG | - | chr4.2:10208160-10208179 | None:intergenic | 55.0% | |
| ATGCTAGGGTGAGGGATGTG+TGG | - | chr4.2:10208298-10208317 | None:intergenic | 55.0% | |
| GGACAAGTGGGTGTGGTTAC+CGG | - | chr4.2:10208153-10208172 | None:intergenic | 55.0% | |
| GGCTTGCATGTGGATGTGTC+CGG | + | chr4.2:10203917-10203936 | MS.gene58172:CDS | 55.0% | |
| GTAACCCCTGCTGCTGATGA+AGG | + | chr4.2:10206667-10206686 | MS.gene58172:CDS | 55.0% | |
| TGCTAGGGTGAGGGATGTGT+GGG | - | chr4.2:10208297-10208316 | None:intergenic | 55.0% | |
| TGGATCGCCGACATGCAAGA+TGG | + | chr4.2:10206434-10206453 | MS.gene58172:intron | 55.0% | |
| TGTGGTTACCGGAGGAGAGT+GGG | - | chr4.2:10208142-10208161 | None:intergenic | 55.0% | |
| ! | ACACAAAGAGTGGACTCCCC+GGG | + | chr4.2:10207918-10207937 | MS.gene58172:intron | 55.0% |
| ! | CGGGCAAGGTTTGCTCTAGT+CGG | + | chr4.2:10207957-10207976 | MS.gene58172:intron | 55.0% |
| ! | GATGGCGGTGATAGTAGCGA+TGG | + | chr4.2:10203896-10203915 | MS.gene58172:CDS | 55.0% |
| ! | TGATTTGGCACGCGGGGATT+TGG | - | chr4.2:10207713-10207732 | None:intergenic | 55.0% |
| ACCCCTGCTGCTGATGAAGG+TGG | + | chr4.2:10206670-10206689 | MS.gene58172:CDS | 60.0% | |
| CAAGTGGGTGTGGTTACCGG+AGG | - | chr4.2:10208150-10208169 | None:intergenic | 60.0% | |
| CAGCAGCAGGGGTTACATGC+TGG | - | chr4.2:10206663-10206682 | None:intergenic | 60.0% | |
| CAGCTGGCTGCAGTTAAGGG+TGG | + | chr4.2:10203389-10203408 | MS.gene58172:CDS | 60.0% | |
| CCAAAGAGTGACGACGGGCA+AGG | + | chr4.2:10207943-10207962 | MS.gene58172:intron | 60.0% | |
| CCTTGCCCGTCGTCACTCTT+TGG | - | chr4.2:10207946-10207965 | None:intergenic | 60.0% | |
| CTGACTGCAGGATCCCTCTG+TGG | - | chr4.2:10207473-10207492 | None:intergenic | 60.0% | |
| GAGTAAGCCCCACTCTCCTC+CGG | + | chr4.2:10208131-10208150 | MS.gene58172:intron | 60.0% | |
| GCCACCTTCATCAGCAGCAG+GGG | - | chr4.2:10206674-10206693 | None:intergenic | 60.0% | |
| GCTAGGGTGAGGGATGTGTG+GGG | - | chr4.2:10208296-10208315 | None:intergenic | 60.0% | |
| GGAGGAGAGTGGGGCTTACT+CGG | - | chr4.2:10208132-10208151 | None:intergenic | 60.0% | |
| GGCCACCTTCATCAGCAGCA+GGG | - | chr4.2:10206675-10206694 | None:intergenic | 60.0% | |
| GGGGGAAGAGGAGGACAAGT+GGG | - | chr4.2:10208165-10208184 | None:intergenic | 60.0% | |
| GGTGAGGGATGTGTGGGGTT+TGG | - | chr4.2:10208291-10208310 | None:intergenic | 60.0% | |
| GTGGTTACCGGAGGAGAGTG+GGG | - | chr4.2:10208141-10208160 | None:intergenic | 60.0% | |
| GTGTGGTTACCGGAGGAGAG+TGG | - | chr4.2:10208143-10208162 | None:intergenic | 60.0% | |
| TGGCCACCTTCATCAGCAGC+AGG | - | chr4.2:10206676-10206695 | None:intergenic | 60.0% | |
| TGGGGGAAGAGGAGGACAAG+TGG | - | chr4.2:10208166-10208185 | None:intergenic | 60.0% | |
| ! | ACAAAGAGTGGACTCCCCGG+GGG | + | chr4.2:10207920-10207939 | MS.gene58172:intron | 60.0% |
| ! | CACAAAGAGTGGACTCCCCG+GGG | + | chr4.2:10207919-10207938 | MS.gene58172:intron | 60.0% |
| CGGGGGCCAAAGAGTGACGA+CGG | + | chr4.2:10207937-10207956 | MS.gene58172:intron | 65.0% | |
| CGTCGTCACTCTTTGGCCCC+CGG | - | chr4.2:10207939-10207958 | None:intergenic | 65.0% | |
| CTGCAGGATCCCTCTGTGGC+CGG | - | chr4.2:10207469-10207488 | None:intergenic | 65.0% | |
| GAAGAGTCCGGCACCGTCCA+AGG | - | chr4.2:10208021-10208040 | None:intergenic | 65.0% | |
| GCCACAACCTTGGACGGTGC+CGG | + | chr4.2:10208011-10208030 | MS.gene58172:intron | 65.0% | |
| GGGGGCCAAAGAGTGACGAC+GGG | + | chr4.2:10207938-10207957 | MS.gene58172:intron | 65.0% | |
| GTCGTCACTCTTTGGCCCCC+GGG | - | chr4.2:10207938-10207957 | None:intergenic | 65.0% | |
| TCCGGCACCGTCCAAGGTTG+TGG | - | chr4.2:10208015-10208034 | None:intergenic | 65.0% | |
| TCGTCACTCTTTGGCCCCCG+GGG | - | chr4.2:10207937-10207956 | None:intergenic | 65.0% | |
| TGCAGGATCCCTCTGTGGCC+GGG | - | chr4.2:10207468-10207487 | None:intergenic | 65.0% | |
| CCACCTTGCCCGGCCACAGA+GGG | + | chr4.2:10207457-10207476 | MS.gene58172:intron | 70.0% | |
| GATCCCTCTGTGGCCGGGCA+AGG | - | chr4.2:10207463-10207482 | None:intergenic | 70.0% | |
| TCCACCTTGCCCGGCCACAG+AGG | + | chr4.2:10207456-10207475 | MS.gene58172:intron | 70.0% | |
| CCCTCTGTGGCCGGGCAAGG+TGG | - | chr4.2:10207460-10207479 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10203227 | 10208640 | 10203227 | ID=MS.gene58172 |
| chr4.2 | mRNA | 10203227 | 10208640 | 10203227 | ID=MS.gene58172.t1;Parent=MS.gene58172 |
| chr4.2 | exon | 10203227 | 10204516 | 10203227 | ID=MS.gene58172.t1.exon1;Parent=MS.gene58172.t1 |
| chr4.2 | CDS | 10203227 | 10204516 | 10203227 | ID=cds.MS.gene58172.t1;Parent=MS.gene58172.t1 |
| chr4.2 | exon | 10204608 | 10204753 | 10204608 | ID=MS.gene58172.t1.exon2;Parent=MS.gene58172.t1 |
| chr4.2 | CDS | 10204608 | 10204753 | 10204608 | ID=cds.MS.gene58172.t1;Parent=MS.gene58172.t1 |
| chr4.2 | exon | 10206639 | 10206848 | 10206639 | ID=MS.gene58172.t1.exon3;Parent=MS.gene58172.t1 |
| chr4.2 | CDS | 10206639 | 10206848 | 10206639 | ID=cds.MS.gene58172.t1;Parent=MS.gene58172.t1 |
| chr4.2 | exon | 10208454 | 10208640 | 10208454 | ID=MS.gene58172.t1.exon4;Parent=MS.gene58172.t1 |
| chr4.2 | CDS | 10208454 | 10208640 | 10208454 | ID=cds.MS.gene58172.t1;Parent=MS.gene58172.t1 |
| Gene Sequence |
| Protein sequence |
