Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051655.t1 | XP_013465943.1 | 97.2 | 214 | 6 | 0 | 1 | 214 | 1 | 214 | 1.40E-109 | 405.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051655.t1 | A3DF24 | 53.2 | 62 | 24 | 2 | 149 | 210 | 7 | 63 | 7.9e-08 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051655.t1 | A0A072VD88 | 97.2 | 214 | 6 | 0 | 1 | 214 | 1 | 214 | 1.0e-109 | 405.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051541 | MS.gene051655 | 0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene052434 | 0.8082 | 3.48E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene054479 | 0.806927 | 6.49E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene056787 | 0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene056986 | 0.804936 | 1.70E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene058429 | 0.818555 | 1.84E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene06010 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene06011 | 0.81158 | 6.52E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene06165 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene062292 | 0.807163 | 5.78E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene063245 | 0.812405 | 4.31E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene065460 | 0.819135 | 1.36E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene065504 | 0.809024 | 2.32E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene066506 | 0.805457 | 1.32E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene069110 | 0.80267 | 5.03E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene070671 | 0.838667 | 2.51E-57 | -1.69E-46 |
| MS.gene051655 | MS.gene074040 | 0.802803 | 4.72E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene074369 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene08202 | 0.824261 | 8.88E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene09166 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene20149 | 0.836927 | 7.02E-57 | -1.69E-46 |
| MS.gene051655 | MS.gene23464 | 0.825626 | 4.23E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene23805 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene24413 | 0.815916 | 7.23E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene25942 | 0.809891 | 1.51E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene31960 | -0.809808 | 1.58E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene32238 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene33056 | 0.820763 | 5.78E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene33991 | 0.804858 | 1.77E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene36154 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene36242 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene36981 | 0.816264 | 6.05E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene37419 | 0.814679 | 1.36E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene39313 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene40006 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene40918 | 0.824451 | 8.01E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene45374 | 0.818332 | 2.07E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene49553 | 0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene49772 | 0.825504 | 4.52E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene51557 | 0.820224 | 7.68E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene51785 | 0.824797 | 6.65E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene53070 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene54377 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene54380 | 0.804218 | 2.40E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene56285 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene58172 | 0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene59292 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene60120 | 0.809271 | 2.06E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene60265 | 0.80185 | 7.41E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene60374 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene60871 | 0.842863 | 1.99E-58 | -1.69E-46 |
| MS.gene051655 | MS.gene64665 | 0.818769 | 1.65E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene67136 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene68188 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene70112 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene70314 | 0.803499 | 3.39E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene74237 | 0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene74510 | 0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene74511 | 0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene76635 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene77971 | -0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene79200 | 0.815951 | 7.11E-52 | -1.69E-46 |
| MS.gene051655 | MS.gene82354 | 0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene83687 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene85519 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene87076 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene87732 | 0.821679 | 3.55E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene88881 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene88883 | 0.810841 | 9.43E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene89712 | 0.808668 | 2.77E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene90119 | 0.824732 | 6.88E-54 | -1.69E-46 |
| MS.gene051655 | MS.gene90882 | 0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene91006 | 0.857554 | 1.51E-62 | -1.69E-46 |
| MS.gene051655 | MS.gene91525 | 0.815024 | 1.14E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene91942 | 0.864272 | 1.37E-64 | -1.69E-46 |
| MS.gene051655 | MS.gene94111 | 0.800889 | 1.17E-48 | -1.69E-46 |
| MS.gene051655 | MS.gene96973 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene97411 | 0.801807 | 7.56E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene99465 | 0.803207 | 3.89E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051655.t1 | MTR_1g017260 | 97.196 | 214 | 6 | 0 | 1 | 214 | 1 | 214 | 2.28e-155 | 429 |
| MS.gene051655.t1 | MTR_3g103530 | 58.294 | 211 | 65 | 3 | 21 | 211 | 13 | 220 | 1.50e-69 | 212 |
| MS.gene051655.t1 | MTR_3g103520 | 43.721 | 215 | 104 | 5 | 1 | 213 | 1 | 200 | 1.68e-48 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051655.t1 | AT4G07990 | 57.944 | 214 | 79 | 6 | 5 | 210 | 4 | 214 | 4.13e-76 | 228 |
| MS.gene051655.t1 | AT4G07990 | 54.386 | 228 | 79 | 7 | 5 | 210 | 4 | 228 | 6.15e-72 | 218 |
| MS.gene051655.t1 | AT4G07990 | 55.385 | 195 | 76 | 6 | 5 | 191 | 4 | 195 | 1.01e-65 | 201 |
Find 44 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACACCACTACACGGTTT+TGG | 0.249771 | 1.3:-5269495 | MS.gene051655:CDS |
| TTTATTTCAGCATCTGTATA+TGG | 0.277581 | 1.3:+5268396 | None:intergenic |
| TCGAATACCAATCATCTCTT+TGG | 0.278893 | 1.3:+5269597 | None:intergenic |
| ATTCTTTCTTTCTTGTTGTA+TGG | 0.287118 | 1.3:+5267199 | None:intergenic |
| CGAGACACCCCAAGGGAAAA+TGG | 0.304097 | 1.3:-5269536 | MS.gene051655:CDS |
| TCTCTTTATAGGAAAGAATA+AGG | 0.308036 | 1.3:-5269718 | MS.gene051655:intron |
| TTAGAAGAAAATACGAGAAT+TGG | 0.328205 | 1.3:-5269655 | MS.gene051655:CDS |
| CTCTTTCACAGACAGCATTT+AGG | 0.330462 | 1.3:-5267400 | MS.gene051655:intron |
| AGTTCAAGAATTTAAGCTTT+GGG | 0.350686 | 1.3:-5271473 | MS.gene051655:CDS |
| TACGAGAATTGGAAGGAAAA+TGG | 0.359437 | 1.3:-5269644 | MS.gene051655:CDS |
| TTATCCTCTTGGTTCTGATC+AGG | 0.372747 | 1.3:+5267356 | None:intergenic |
| ATATACAGATGCTGAAATAA+AGG | 0.398272 | 1.3:-5268394 | MS.gene051655:intron |
| ACCAATCATCTCTTTGGAAA+TGG | 0.406526 | 1.3:+5269603 | None:intergenic |
| AATTGGAAGGAAAATGGTTC+TGG | 0.420102 | 1.3:-5269638 | MS.gene051655:CDS |
| AAGACCTACCTTTATCCTCT+TGG | 0.428497 | 1.3:+5267345 | None:intergenic |
| AAAGTGTGTTTAATAGAGAA+AGG | 0.440344 | 1.3:-5269688 | MS.gene051655:CDS |
| AAGTTCAAGAATTTAAGCTT+TGG | 0.448732 | 1.3:-5271474 | MS.gene051655:CDS |
| ACCATTTCCAAAGAGATGAT+TGG | 0.453905 | 1.3:-5269604 | MS.gene051655:CDS |
| GATCAGAACCAAGAGGATAA+AGG | 0.457480 | 1.3:-5267353 | MS.gene051655:intron |
| AGAAGTAATGGATTCATATG+AGG | 0.488969 | 1.3:-5267222 | MS.gene051655:CDS |
| GCAAGAGGAGTACGAGGAAG+AGG | 0.489481 | 1.3:-5270403 | MS.gene051655:CDS |
| AAAAGAACCGCCTTTCGACC+TGG | 0.489496 | 1.3:+5270473 | None:intergenic |
| AAGTGTGTTTAATAGAGAAA+GGG | 0.502349 | 1.3:-5269687 | MS.gene051655:CDS |
| AGCTAAGTTCAAAGAAGTAA+TGG | 0.518736 | 1.3:-5267234 | MS.gene051655:CDS |
| AGAACTCACGGCGAAGGTGG+TGG | 0.531498 | 1.3:+5271417 | None:intergenic |
| GTTCAAGAATTTAAGCTTTG+GGG | 0.537154 | 1.3:-5271472 | MS.gene051655:CDS |
| TTGTAGTTGTCCAGGTCGAA+AGG | 0.543788 | 1.3:-5270483 | MS.gene051655:intron |
| TTCAAGAAGAAGCATGGAAG+CGG | 0.553375 | 1.3:-5270440 | MS.gene051655:CDS |
| CGAGGAAGAGGCTGAGAGAG+TGG | 0.567175 | 1.3:-5270391 | MS.gene051655:intron |
| AACAAACCTTTAGAGACCAA+TGG | 0.589429 | 1.3:-5269568 | MS.gene051655:CDS |
| ACTCACGGCGAAGGTGGTGG+CGG | 0.589497 | 1.3:+5271420 | None:intergenic |
| AGGCGTAGAACTCACGGCGA+AGG | 0.592392 | 1.3:+5271411 | None:intergenic |
| TTCATTAACACACCACTACA+CGG | 0.593016 | 1.3:-5269501 | MS.gene051655:CDS |
| AAGAAAATACGAGAATTGGA+AGG | 0.602692 | 1.3:-5269651 | MS.gene051655:CDS |
| TAAATGAAGGAAGATGAAGA+AGG | 0.617251 | 1.3:-5271523 | MS.gene051655:CDS |
| ACAGACAGCATTTAGGACGA+AGG | 0.620598 | 1.3:-5267393 | MS.gene051655:intron |
| CGTAGAACTCACGGCGAAGG+TGG | 0.635643 | 1.3:+5271414 | None:intergenic |
| GTACAATAAGCGATTGCAAG+AGG | 0.639039 | 1.3:-5270418 | MS.gene051655:CDS |
| CAAGACCCAAAACCGTGTAG+TGG | 0.644029 | 1.3:+5269489 | None:intergenic |
| AAAATCACCGAGACACCCCA+AGG | 0.648601 | 1.3:-5269544 | MS.gene051655:CDS |
| GCGATTGCAAGAGGAGTACG+AGG | 0.657325 | 1.3:-5270409 | MS.gene051655:CDS |
| TAGTTGTCCAGGTCGAAAGG+CGG | 0.658973 | 1.3:-5270480 | MS.gene051655:CDS |
| AAATCACCGAGACACCCCAA+GGG | 0.664599 | 1.3:-5269543 | MS.gene051655:CDS |
| TCATCCTGATCAGAACCAAG+AGG | 0.690141 | 1.3:-5267360 | MS.gene051655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGAAAATGAAATAAA+TGG | + | chr1.3:5267353-5267372 | None:intergenic | 10.0% |
| !!! | CACATTTTTTTTTAAAAAAA+AGG | + | chr1.3:5270127-5270146 | None:intergenic | 10.0% |
| !!! | AGTTCTTATTTACATTTTTT+TGG | - | chr1.3:5268129-5268148 | MS.gene051655:intron | 15.0% |
| !!! | CTAAATATAAAAGCATAATA+TGG | - | chr1.3:5269580-5269599 | MS.gene051655:CDS | 15.0% |
| !!! | TTTTTATTTTACGTCATTTT+AGG | - | chr1.3:5267374-5267393 | MS.gene051655:CDS | 15.0% |
| !! | AACATACTTATTATGATTAG+TGG | - | chr1.3:5271035-5271054 | MS.gene051655:intron | 20.0% |
| !! | ACATACTTATTATGATTAGT+GGG | - | chr1.3:5271036-5271055 | MS.gene051655:intron | 20.0% |
| !! | ATATCAGAATGCTAAAATAT+AGG | - | chr1.3:5269299-5269318 | MS.gene051655:intron | 20.0% |
| !! | CATTATTACATAATGATTCA+TGG | - | chr1.3:5271423-5271442 | MS.gene051655:intron | 20.0% |
| !! | TATAATTTACAAACATCTTG+TGG | + | chr1.3:5270620-5270639 | None:intergenic | 20.0% |
| !! | TATATGTGACTAATCATAAA+TGG | + | chr1.3:5268905-5268924 | None:intergenic | 20.0% |
| !!! | ATAACAATAACTTTTCTAAG+TGG | - | chr1.3:5269823-5269842 | MS.gene051655:intron | 20.0% |
| !!! | ATTATACCAACTATTTTGAT+TGG | - | chr1.3:5270634-5270653 | MS.gene051655:intron | 20.0% |
| ! | AAAGTGTGTTTAATAGAGAA+AGG | - | chr1.3:5269019-5269038 | MS.gene051655:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1.3:5267798-5267817 | None:intergenic | 25.0% |
| ! | AACTCAGAAATGTAAATATG+TGG | - | chr1.3:5270796-5270815 | MS.gene051655:intron | 25.0% |
| ! | AAGTGTGTTTAATAGAGAAA+GGG | - | chr1.3:5269020-5269039 | MS.gene051655:intron | 25.0% |
| ! | AAGTTCAAGAATTTAAGCTT+TGG | - | chr1.3:5267233-5267252 | MS.gene051655:CDS | 25.0% |
| ! | ACCACAATAACAATAAAATC+AGG | + | chr1.3:5268387-5268406 | None:intergenic | 25.0% |
| ! | ACTCAGAAATGTAAATATGT+GGG | - | chr1.3:5270797-5270816 | MS.gene051655:intron | 25.0% |
| ! | ACTCTATATTCTGTTAACAT+GGG | - | chr1.3:5267651-5267670 | MS.gene051655:intron | 25.0% |
| ! | AGTTCAAGAATTTAAGCTTT+GGG | - | chr1.3:5267234-5267253 | MS.gene051655:CDS | 25.0% |
| ! | ATATACAGATGCTGAAATAA+AGG | - | chr1.3:5270313-5270332 | MS.gene051655:intron | 25.0% |
| ! | ATTTATATAAAACCGGTCAA+AGG | - | chr1.3:5270917-5270936 | MS.gene051655:intron | 25.0% |
| ! | CATATGATAAATATGACAGA+GGG | + | chr1.3:5270431-5270450 | None:intergenic | 25.0% |
| ! | GAAAATGAAAAGAACAAAGA+AGG | + | chr1.3:5267319-5267338 | None:intergenic | 25.0% |
| ! | TACAGAAAATCAAGGTAAAA+AGG | + | chr1.3:5271160-5271179 | None:intergenic | 25.0% |
| ! | TATTACCGAAAATGAAAGAA+AGG | + | chr1.3:5271255-5271274 | None:intergenic | 25.0% |
| ! | TCAAATATATTCAGCCTATA+CGG | - | chr1.3:5270727-5270746 | MS.gene051655:intron | 25.0% |
| ! | TCTCTTTATAGGAAAGAATA+AGG | - | chr1.3:5268989-5269008 | MS.gene051655:intron | 25.0% |
| ! | TTAGAAGAAAATACGAGAAT+TGG | - | chr1.3:5269052-5269071 | MS.gene051655:intron | 25.0% |
| ! | TTCTAAGTGGATATATTGTA+TGG | - | chr1.3:5269836-5269855 | MS.gene051655:intron | 25.0% |
| ! | TTTATATAAAACCGGTCAAA+GGG | - | chr1.3:5270918-5270937 | MS.gene051655:intron | 25.0% |
| ! | TTTATTTCAGCATCTGTATA+TGG | + | chr1.3:5270314-5270333 | None:intergenic | 25.0% |
| !! | AAAATTTGCTTTGTCACAAA+AGG | + | chr1.3:5268508-5268527 | None:intergenic | 25.0% |
| !! | AATCTCTATTAGTTGATTCT+AGG | - | chr1.3:5268533-5268552 | MS.gene051655:intron | 25.0% |
| !! | ATCATGTGATCTTTGAAAAT+GGG | - | chr1.3:5268476-5268495 | MS.gene051655:intron | 25.0% |
| !! | ATTCTTTCTTTCTTGTTGTA+TGG | + | chr1.3:5271511-5271530 | None:intergenic | 25.0% |
| !! | CTCTTTTTAACACAATATCT+TGG | - | chr1.3:5270348-5270367 | MS.gene051655:intron | 25.0% |
| !! | TATCATGTGATCTTTGAAAA+TGG | - | chr1.3:5268475-5268494 | MS.gene051655:intron | 25.0% |
| !! | TATTAGTTGATTCTAGGAAT+TGG | - | chr1.3:5268539-5268558 | MS.gene051655:intron | 25.0% |
| !! | TGTTTCTATCTTCTCTTTAT+AGG | - | chr1.3:5268978-5268997 | MS.gene051655:intron | 25.0% |
| !! | TTTGAAGCAGTATATGATTA+TGG | - | chr1.3:5270029-5270048 | MS.gene051655:intron | 25.0% |
| !! | TTTGACCTTTCTTTCATTTT+CGG | - | chr1.3:5271247-5271266 | MS.gene051655:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr1.3:5267805-5267824 | MS.gene051655:intron | 25.0% |
| !!! | ACCTGATTTTATTGTTATTG+TGG | - | chr1.3:5268383-5268402 | MS.gene051655:intron | 25.0% |
| !!! | ATTTTTCTCTTTGGCTTAAT+TGG | - | chr1.3:5267259-5267278 | MS.gene051655:intron | 25.0% |
| !!! | GATGTTACGTTATTTTTAGA+CGG | + | chr1.3:5268450-5268469 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1.3:5267940-5267959 | None:intergenic | 25.0% |
| !!! | TGAAATGCTCTAAAGTATAA+AGG | - | chr1.3:5270696-5270715 | MS.gene051655:intron | 25.0% |
| !!! | TTTGACCGGTTTTATATAAA+TGG | + | chr1.3:5270918-5270937 | None:intergenic | 25.0% |
| !!! | TTTTCGTTGATGTTATTTGA+AGG | - | chr1.3:5270465-5270484 | MS.gene051655:CDS | 25.0% |
| AAATATGCTTATAAAGTGGC+GGG | + | chr1.3:5269704-5269723 | None:intergenic | 30.0% | |
| AACAGAATATAGAGTCTCTT+AGG | + | chr1.3:5267646-5267665 | None:intergenic | 30.0% | |
| AAGAAAATACGAGAATTGGA+AGG | - | chr1.3:5269056-5269075 | MS.gene051655:intron | 30.0% | |
| ACAATATCTTGGCATATTAC+TGG | - | chr1.3:5270359-5270378 | MS.gene051655:intron | 30.0% | |
| ACATTCCGAACTTAAATCAA+CGG | - | chr1.3:5268656-5268675 | MS.gene051655:intron | 30.0% | |
| ACCTGAAAATGTGTTATAAG+TGG | - | chr1.3:5269511-5269530 | MS.gene051655:CDS | 30.0% | |
| ACGGTATATGATTAAAGCAA+GGG | + | chr1.3:5270198-5270217 | None:intergenic | 30.0% | |
| AGCTAAGTTCAAAGAAGTAA+TGG | - | chr1.3:5271473-5271492 | MS.gene051655:CDS | 30.0% | |
| ATATTGTATGGTACATCTAG+AGG | - | chr1.3:5269848-5269867 | MS.gene051655:intron | 30.0% | |
| CAAATATGCTTATAAAGTGG+CGG | + | chr1.3:5269705-5269724 | None:intergenic | 30.0% | |
| CAGTTATGTAAGAATGAGTT+AGG | - | chr1.3:5269557-5269576 | MS.gene051655:CDS | 30.0% | |
| CCATATGATAAATATGACAG+AGG | + | chr1.3:5270432-5270451 | None:intergenic | 30.0% | |
| CCTCTGTCATATTTATCATA+TGG | - | chr1.3:5270429-5270448 | MS.gene051655:CDS | 30.0% | |
| CCTGAAAATGTGTTATAAGT+GGG | - | chr1.3:5269512-5269531 | MS.gene051655:CDS | 30.0% | |
| CGCTTATCATTCATGATAAA+AGG | + | chr1.3:5267436-5267455 | None:intergenic | 30.0% | |
| CTAACTCATTCTTACATAAC+TGG | + | chr1.3:5269559-5269578 | None:intergenic | 30.0% | |
| CTGCAAATATGCTTATAAAG+TGG | + | chr1.3:5269708-5269727 | None:intergenic | 30.0% | |
| GACTCTATATTCTGTTAACA+TGG | - | chr1.3:5267650-5267669 | MS.gene051655:intron | 30.0% | |
| GTTCAAGAATTTAAGCTTTG+GGG | - | chr1.3:5267235-5267254 | MS.gene051655:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr1.3:5267758-5267777 | MS.gene051655:intron | 30.0% | |
| TAAGTGAAGTGACTATCATA+AGG | + | chr1.3:5268828-5268847 | None:intergenic | 30.0% | |
| TACATAACTGGATTGTTCTA+GGG | + | chr1.3:5269547-5269566 | None:intergenic | 30.0% | |
| TATTGTATGGTACATCTAGA+GGG | - | chr1.3:5269849-5269868 | MS.gene051655:intron | 30.0% | |
| TCAGATCATTGTAGCAATTA+AGG | + | chr1.3:5269469-5269488 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1.3:5267754-5267773 | None:intergenic | 30.0% | |
| TTAACTAGTGTCCAACAAAA+CGG | + | chr1.3:5270542-5270561 | None:intergenic | 30.0% | |
| TTACATAACTGGATTGTTCT+AGG | + | chr1.3:5269548-5269567 | None:intergenic | 30.0% | |
| TTTAAACAAGTGCAACAACA+TGG | + | chr1.3:5269415-5269434 | None:intergenic | 30.0% | |
| ! | CTCTGCCATTTATATAAAAC+CGG | - | chr1.3:5270910-5270929 | MS.gene051655:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1.3:5267793-5267812 | MS.gene051655:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr1.3:5267815-5267834 | MS.gene051655:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1.3:5267944-5267963 | MS.gene051655:intron | 30.0% |
| ! | TTAATTTGAAGCAGTTCTAG+AGG | - | chr1.3:5269985-5270004 | MS.gene051655:intron | 30.0% |
| ! | TTTTCATAAGTTCTGCCAAA+TGG | - | chr1.3:5267576-5267595 | MS.gene051655:intron | 30.0% |
| !! | AGAAGTAATGGATTCATATG+AGG | - | chr1.3:5271485-5271504 | MS.gene051655:CDS | 30.0% |
| !! | ATTTTTCCATTGGTCTCTAA+AGG | + | chr1.3:5269148-5269167 | None:intergenic | 30.0% |
| !! | TAATTTGAAGCAGTTCTAGA+GGG | - | chr1.3:5269986-5270005 | MS.gene051655:intron | 30.0% |
| !! | TATACTTTAGAGCATTTCAC+AGG | + | chr1.3:5270695-5270714 | None:intergenic | 30.0% |
| !! | TTTTAAAAAAAAGGGCAACC+CGG | + | chr1.3:5270118-5270137 | None:intergenic | 30.0% |
| AAATATGACAGAGGGTGATA+GGG | + | chr1.3:5270423-5270442 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1.3:5267870-5267889 | None:intergenic | 35.0% | |
| AATATCTTGTACCCTTTGAC+CGG | + | chr1.3:5270932-5270951 | None:intergenic | 35.0% | |
| AATTGGAAGGAAAATGGTTC+TGG | - | chr1.3:5269069-5269088 | MS.gene051655:intron | 35.0% | |
| ACCATTTCCAAAGAGATGAT+TGG | - | chr1.3:5269103-5269122 | MS.gene051655:intron | 35.0% | |
| ACCTGAGATCAATCAAAAGA+AGG | + | chr1.3:5270280-5270299 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr1.3:5268005-5268024 | None:intergenic | 35.0% | |
| AGAGAGAAAGAGAAGAGAAA+TGG | + | chr1.3:5270881-5270900 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1.3:5267786-5267805 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1.3:5267951-5267970 | None:intergenic | 35.0% | |
| AGGGTACAAGATATTGATGA+TGG | - | chr1.3:5270937-5270956 | MS.gene051655:intron | 35.0% | |
| AGTCAAGTTAAAAGAGGTAG+AGG | + | chr1.3:5267845-5267864 | None:intergenic | 35.0% | |
| ATATATTCAGCCTATACGGA+TGG | - | chr1.3:5270731-5270750 | MS.gene051655:intron | 35.0% | |
| ATGAACTACCACATGAAACT+AGG | - | chr1.3:5268684-5268703 | MS.gene051655:intron | 35.0% | |
| ATGGCCCAATAAAAACCAAA+TGG | - | chr1.3:5270048-5270067 | MS.gene051655:intron | 35.0% | |
| CAATAAATAGTCTGTAGGCT+TGG | - | chr1.3:5270962-5270981 | MS.gene051655:intron | 35.0% | |
| CCCAATAAAAACCAAATGGT+GGG | - | chr1.3:5270052-5270071 | MS.gene051655:intron | 35.0% | |
| CGAATGCCAATCAAAATAGT+TGG | + | chr1.3:5270643-5270662 | None:intergenic | 35.0% | |
| CGGTATATGATTAAAGCAAG+GGG | + | chr1.3:5270197-5270216 | None:intergenic | 35.0% | |
| CTTAACAACCCATTGTTGTA+TGG | + | chr1.3:5268111-5268130 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr1.3:5267926-5267945 | None:intergenic | 35.0% | |
| GAAGAGTGAAAAAAATACGC+AGG | + | chr1.3:5270824-5270843 | None:intergenic | 35.0% | |
| GACGGTATATGATTAAAGCA+AGG | + | chr1.3:5270199-5270218 | None:intergenic | 35.0% | |
| GAGAGAAAGAGAAGAGAAAT+GGG | + | chr1.3:5270880-5270899 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1.3:5267873-5267892 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACCATT+TGG | + | chr1.3:5267594-5267613 | None:intergenic | 35.0% | |
| TAAATATGACAGAGGGTGAT+AGG | + | chr1.3:5270424-5270443 | None:intergenic | 35.0% | |
| TACATTTCTGAGTTACGTCA+CGG | + | chr1.3:5270790-5270809 | None:intergenic | 35.0% | |
| TACGAGAATTGGAAGGAAAA+TGG | - | chr1.3:5269063-5269082 | MS.gene051655:intron | 35.0% | |
| TCACTTCTGATAAGTCGTTT+AGG | - | chr1.3:5268952-5268971 | MS.gene051655:intron | 35.0% | |
| TCAGAAGTGACTATCATTTG+TGG | + | chr1.3:5268942-5268961 | None:intergenic | 35.0% | |
| TCATAAGTGACTATTACACG+TGG | + | chr1.3:5268864-5268883 | None:intergenic | 35.0% | |
| TCGAATACCAATCATCTCTT+TGG | + | chr1.3:5269113-5269132 | None:intergenic | 35.0% | |
| TGAAATCACCTAGTTTCATG+TGG | + | chr1.3:5268695-5268714 | None:intergenic | 35.0% | |
| TGATATAATGTCTGTCCCAA+GGG | + | chr1.3:5269626-5269645 | None:intergenic | 35.0% | |
| TGCTTAGATGTTTCATTGCT+TGG | - | chr1.3:5268775-5268794 | MS.gene051655:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr1.3:5267931-5267950 | None:intergenic | 35.0% | |
| TTCATTAACACACCACTACA+CGG | - | chr1.3:5269206-5269225 | MS.gene051655:intron | 35.0% | |
| TTCGACAAAATCCTATGGTA+TGG | - | chr1.3:5270659-5270678 | MS.gene051655:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1.3:5267874-5267893 | MS.gene051655:intron | 35.0% | |
| ! | AACAAACCTTTAGAGACCAA+TGG | - | chr1.3:5269139-5269158 | MS.gene051655:intron | 35.0% |
| ! | ACCAATCATCTCTTTGGAAA+TGG | + | chr1.3:5269107-5269126 | None:intergenic | 35.0% |
| ! | AGAGCATTTCACAGGTAATT+TGG | + | chr1.3:5270687-5270706 | None:intergenic | 35.0% |
| ! | ATGTGATCTTTGAAAATGGG+AGG | - | chr1.3:5268479-5268498 | MS.gene051655:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1.3:5267774-5267793 | None:intergenic | 35.0% |
| ! | CCCACTTATAACACATTTTC+AGG | + | chr1.3:5269515-5269534 | None:intergenic | 35.0% |
| ! | CGTTGATGTTATTTGAAGGA+TGG | - | chr1.3:5270469-5270488 | MS.gene051655:CDS | 35.0% |
| ! | GGGTACAAGATATTGATGAT+GGG | - | chr1.3:5270938-5270957 | MS.gene051655:intron | 35.0% |
| ! | TGAACTTTTTGTAGTTGTCC+AGG | - | chr1.3:5268216-5268235 | MS.gene051655:intron | 35.0% |
| ! | TTATGCTTCCATTTTCCCTT+GGG | + | chr1.3:5269182-5269201 | None:intergenic | 35.0% |
| ! | TTGCTAACTTTTGATGCAGA+CGG | + | chr1.3:5270217-5270236 | None:intergenic | 35.0% |
| ! | TTTATGCTTCCATTTTCCCT+TGG | + | chr1.3:5269183-5269202 | None:intergenic | 35.0% |
| !! | CTCAACCGTTGATTTAAGTT+CGG | + | chr1.3:5268664-5268683 | None:intergenic | 35.0% |
| !! | CTTTGGGGAATTTTTCTCTT+TGG | - | chr1.3:5267250-5267269 | MS.gene051655:intron | 35.0% |
| !! | GGTACAAGATATTGATGATG+GGG | - | chr1.3:5270939-5270958 | MS.gene051655:intron | 35.0% |
| !! | TCCTTCTTTTGATTGATCTC+AGG | - | chr1.3:5270276-5270295 | MS.gene051655:intron | 35.0% |
| !!! | CCCACCATTTGGTTTTTATT+GGG | + | chr1.3:5270055-5270074 | None:intergenic | 35.0% |
| !!! | CTAGTTTTGTACCGTTTTGT+TGG | - | chr1.3:5270528-5270547 | MS.gene051655:intron | 35.0% |
| !!! | TCCCACCATTTGGTTTTTAT+TGG | + | chr1.3:5270056-5270075 | None:intergenic | 35.0% |
| AAGACCTACCTTTATCCTCT+TGG | + | chr1.3:5271365-5271384 | None:intergenic | 40.0% | |
| AATATGACAGAGGGTGATAG+GGG | + | chr1.3:5270422-5270441 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGAG+TGG | + | chr1.3:5267978-5267997 | None:intergenic | 40.0% | |
| ACTAGGTGATTTCAAACTGC+AGG | - | chr1.3:5268701-5268720 | MS.gene051655:intron | 40.0% | |
| ACTCCGTACCATACAACAAT+GGG | - | chr1.3:5268100-5268119 | MS.gene051655:intron | 40.0% | |
| AGAACCAAGAGGATAAAGGT+AGG | - | chr1.3:5271358-5271377 | MS.gene051655:intron | 40.0% | |
| AGACATTATATCAGGCACTC+AGG | - | chr1.3:5269633-5269652 | MS.gene051655:CDS | 40.0% | |
| AGACGTATGATCTAGATCGA+CGG | - | chr1.3:5268592-5268611 | MS.gene051655:intron | 40.0% | |
| AGAGTCTATTCAAGATCCCT+TGG | - | chr1.3:5269607-5269626 | MS.gene051655:CDS | 40.0% | |
| AGCCTACATTGAGTGAGATA+TGG | + | chr1.3:5269732-5269751 | None:intergenic | 40.0% | |
| ATCATTAGAGAGAGAGAGTG+GGG | + | chr1.3:5267976-5267995 | None:intergenic | 40.0% | |
| ATTATATCAGGCACTCAGGT+TGG | - | chr1.3:5269637-5269656 | MS.gene051655:CDS | 40.0% | |
| CAACCCATTGTTGTATGGTA+CGG | + | chr1.3:5268106-5268125 | None:intergenic | 40.0% | |
| CATCATTAGAGAGAGAGAGT+GGG | + | chr1.3:5267977-5267996 | None:intergenic | 40.0% | |
| CTCTTTCACAGACAGCATTT+AGG | - | chr1.3:5271307-5271326 | MS.gene051655:intron | 40.0% | |
| CTGATATAATGTCTGTCCCA+AGG | + | chr1.3:5269627-5269646 | None:intergenic | 40.0% | |
| CTTGGGACAGACATTATATC+AGG | - | chr1.3:5269625-5269644 | MS.gene051655:CDS | 40.0% | |
| GACCATATCTCACTCAATGT+AGG | - | chr1.3:5269727-5269746 | MS.gene051655:intron | 40.0% | |
| GAGGAGAGTCAAGTTAAAAG+AGG | + | chr1.3:5267851-5267870 | None:intergenic | 40.0% | |
| GAGTCTATTCAAGATCCCTT+GGG | - | chr1.3:5269608-5269627 | MS.gene051655:CDS | 40.0% | |
| GATCAGAACCAAGAGGATAA+AGG | - | chr1.3:5271354-5271373 | MS.gene051655:intron | 40.0% | |
| GCCCAATAAAAACCAAATGG+TGG | - | chr1.3:5270051-5270070 | MS.gene051655:intron | 40.0% | |
| GTAATTTGGCACCATACCAT+AGG | + | chr1.3:5270673-5270692 | None:intergenic | 40.0% | |
| GTACAATAAGCGATTGCAAG+AGG | - | chr1.3:5268289-5268308 | MS.gene051655:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr1.3:5268011-5268030 | None:intergenic | 40.0% | |
| TGGATGTGAAAATGTGACAG+AGG | - | chr1.3:5271443-5271462 | MS.gene051655:CDS | 40.0% | |
| TGGCATTCGACAAAATCCTA+TGG | - | chr1.3:5270654-5270673 | MS.gene051655:intron | 40.0% | |
| TGGGGCAATAAATAGTCTGT+AGG | - | chr1.3:5270957-5270976 | MS.gene051655:intron | 40.0% | |
| TTATATCAGGCACTCAGGTT+GGG | - | chr1.3:5269638-5269657 | MS.gene051655:CDS | 40.0% | |
| TTCATTGCTTGGTTAGTGCT+AGG | - | chr1.3:5268786-5268805 | MS.gene051655:intron | 40.0% | |
| TTCTCACAATCCATCCGTAT+AGG | + | chr1.3:5270744-5270763 | None:intergenic | 40.0% | |
| TTGTGACACGCAGTTACAAT+GGG | + | chr1.3:5268569-5268588 | None:intergenic | 40.0% | |
| ! | TATGCTTCCATTTTCCCTTG+GGG | + | chr1.3:5269181-5269200 | None:intergenic | 40.0% |
| ! | TGTCTCGGTGATTTTTCCAT+TGG | + | chr1.3:5269158-5269177 | None:intergenic | 40.0% |
| ! | TTCAAGAAGAAGCATGGAAG+CGG | - | chr1.3:5268267-5268286 | MS.gene051655:intron | 40.0% |
| !! | CAAACTGACTTGTAAGGCAA+GGG | - | chr1.3:5269675-5269694 | MS.gene051655:CDS | 40.0% |
| !! | CAGCTTTTCAAGAAGAAGCA+TGG | - | chr1.3:5268261-5268280 | MS.gene051655:intron | 40.0% |
| !! | TTATCCTCTTGGTTCTGATC+AGG | + | chr1.3:5271354-5271373 | None:intergenic | 40.0% |
| CACTCCGTACCATACAACAA+TGG | - | chr1.3:5268099-5268118 | MS.gene051655:intron | 45.0% | |
| CCTTGCCTTACAAGTCAGTT+TGG | + | chr1.3:5269677-5269696 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1.3:5268058-5268077 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1.3:5268061-5268080 | MS.gene051655:intron | 45.0% | |
| GTTGTGACACGCAGTTACAA+TGG | + | chr1.3:5268570-5268589 | None:intergenic | 45.0% | |
| TCATCCTGATCAGAACCAAG+AGG | - | chr1.3:5271347-5271366 | MS.gene051655:intron | 45.0% | |
| TCATTAGAGAGAGAGAGTGG+GGG | + | chr1.3:5267975-5267994 | None:intergenic | 45.0% | |
| TGCAGTAAGCTGCAAAGAAG+TGG | - | chr1.3:5268742-5268761 | MS.gene051655:intron | 45.0% | |
| TGTGACACGCAGTTACAATG+GGG | + | chr1.3:5268568-5268587 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr1.3:5268098-5268117 | None:intergenic | 45.0% | |
| TTGTAGTTGTCCAGGTCGAA+AGG | - | chr1.3:5268224-5268243 | MS.gene051655:intron | 45.0% | |
| ! | AACACACCACTACACGGTTT+TGG | - | chr1.3:5269212-5269231 | MS.gene051655:intron | 45.0% |
| ! | ACACACCACTACACGGTTTT+GGG | - | chr1.3:5269213-5269232 | MS.gene051655:intron | 45.0% |
| ! | ACAGACAGCATTTAGGACGA+AGG | - | chr1.3:5271314-5271333 | MS.gene051655:intron | 45.0% |
| ! | CAAAGAAGGCGTAGAACTCA+CGG | + | chr1.3:5267305-5267324 | None:intergenic | 45.0% |
| ! | CTGTAGGCTTGGAAGTTTTG+TGG | - | chr1.3:5270973-5270992 | MS.gene051655:intron | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr1.3:5268097-5268116 | None:intergenic | 45.0% |
| ! | TATATCAGGCACTCAGGTTG+GGG | - | chr1.3:5269639-5269658 | MS.gene051655:CDS | 45.0% |
| !! | CCAAACTGACTTGTAAGGCA+AGG | - | chr1.3:5269674-5269693 | MS.gene051655:CDS | 45.0% |
| !!! | ACATTTTTTTTTAAAAAAAA+GGG | + | chr1.3:5270126-5270145 | None:intergenic | 5.0% |
| !!! | TAAATTTTTTTATTCTTTAT+AGG | + | chr1.3:5269379-5269398 | None:intergenic | 5.0% |
| !!! | TTTTATTTAAGAAATAATAA+TGG | + | chr1.3:5270506-5270525 | None:intergenic | 5.0% |
| AAAAGAACCGCCTTTCGACC+TGG | + | chr1.3:5268237-5268256 | None:intergenic | 50.0% | |
| AAAATCACCGAGACACCCCA+AGG | - | chr1.3:5269163-5269182 | MS.gene051655:intron | 50.0% | |
| AAATCACCGAGACACCCCAA+GGG | - | chr1.3:5269164-5269183 | MS.gene051655:intron | 50.0% | |
| AGTCAGTTTGGCGACGTTGT+TGG | + | chr1.3:5269665-5269684 | None:intergenic | 50.0% | |
| CAAGACCCAAAACCGTGTAG+TGG | + | chr1.3:5269221-5269240 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+CGG | + | chr1.3:5267706-5267725 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.3:5267709-5267728 | MS.gene051655:intron | 50.0% | |
| TAGTTGTCCAGGTCGAAAGG+CGG | - | chr1.3:5268227-5268246 | MS.gene051655:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1.3:5267883-5267902 | MS.gene051655:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1.3:5268050-5268069 | None:intergenic | 50.0% |
| ! | AGGATGTAGCGTTGGATGAG+TGG | + | chr1.3:5268030-5268049 | None:intergenic | 50.0% |
| ! | CGAGCCTTATCCCACTAAGT+GGG | - | chr1.3:5267704-5267723 | MS.gene051655:intron | 50.0% |
| ! | GAGCCTTATCCCACTAAGTG+GGG | - | chr1.3:5267705-5267724 | MS.gene051655:intron | 50.0% |
| !! | ACTGACTTGTAAGGCAAGGG+AGG | - | chr1.3:5269678-5269697 | MS.gene051655:CDS | 50.0% |
| !! | CATTTTCCCTTGGGGTGTCT+CGG | + | chr1.3:5269173-5269192 | None:intergenic | 50.0% |
| !! | CGTCGCCAAACTGACTTGTA+AGG | - | chr1.3:5269669-5269688 | MS.gene051655:CDS | 50.0% |
| !!! | ACACGGTTTTGGGTCTTGAC+AGG | - | chr1.3:5269223-5269242 | MS.gene051655:intron | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1.3:5270092-5270111 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.3:5267717-5267736 | MS.gene051655:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.3:5267718-5267737 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.3:5267711-5267730 | None:intergenic | 55.0% | |
| CGAGACACCCCAAGGGAAAA+TGG | - | chr1.3:5269171-5269190 | MS.gene051655:intron | 55.0% | |
| CGGAGATGAGGATGTAGCGT+TGG | + | chr1.3:5268038-5268057 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1.3:5270091-5270110 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1.3:5267884-5267903 | MS.gene051655:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.3:5267717-5267736 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1.3:5270096-5270115 | MS.gene051655:intron | 55.0% |
| ! | CCGAGCCTTATCCCACTAAG+TGG | - | chr1.3:5267703-5267722 | MS.gene051655:intron | 55.0% |
| ! | GCAAGAGGAGTACGAGGAAG+AGG | - | chr1.3:5268304-5268323 | MS.gene051655:intron | 55.0% |
| ! | GCGATTGCAAGAGGAGTACG+AGG | - | chr1.3:5268298-5268317 | MS.gene051655:intron | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr1.3:5268094-5268113 | None:intergenic | 55.0% |
| AGAACTCACGGCGAAGGTGG+TGG | + | chr1.3:5267293-5267312 | None:intergenic | 60.0% | |
| AGGCGTAGAACTCACGGCGA+AGG | + | chr1.3:5267299-5267318 | None:intergenic | 60.0% | |
| CGAGGAAGAGGCTGAGAGAG+TGG | - | chr1.3:5268316-5268335 | MS.gene051655:intron | 60.0% | |
| CGTAGAACTCACGGCGAAGG+TGG | + | chr1.3:5267296-5267315 | None:intergenic | 60.0% | |
| ! | AAATGGTGGGACCCCTTCCC+GGG | - | chr1.3:5270065-5270084 | MS.gene051655:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1.3:5270064-5270083 | MS.gene051655:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1.3:5270097-5270116 | MS.gene051655:intron | 60.0% |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.3:5270066-5270085 | None:intergenic | 65.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr1.3:5267894-5267913 | None:intergenic | 65.0% | |
| ! | ACTCACGGCGAAGGTGGTGG+CGG | + | chr1.3:5267290-5267309 | None:intergenic | 65.0% |
| CATACGCAGGGCCCGGGAAG+GGG | + | chr1.3:5270079-5270098 | None:intergenic | 70.0% | |
| CTTCCCGGGCCCTGCGTATG+CGG | - | chr1.3:5270079-5270098 | MS.gene051655:intron | 70.0% | |
| GCATACGCAGGGCCCGGGAA+GGG | + | chr1.3:5270080-5270099 | None:intergenic | 70.0% | |
| TTCCCGGGCCCTGCGTATGC+GGG | - | chr1.3:5270080-5270099 | MS.gene051655:intron | 70.0% | |
| CGCATACGCAGGGCCCGGGA+AGG | + | chr1.3:5270081-5270100 | None:intergenic | 75.0% | |
| CTCCCGCATACGCAGGGCCC+GGG | + | chr1.3:5270085-5270104 | None:intergenic | 75.0% | |
| GCTCCCGCATACGCAGGGCC+CGG | + | chr1.3:5270086-5270105 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5267187 | 5271542 | 5267187 | ID=MS.gene051655 |
| chr1.3 | mRNA | 5267187 | 5271542 | 5267187 | ID=MS.gene051655.t1;Parent=MS.gene051655 |
| chr1.3 | exon | 5271426 | 5271542 | 5271426 | ID=MS.gene051655.t1.exon1;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5271426 | 5271542 | 5271426 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| chr1.3 | exon | 5270392 | 5270499 | 5270392 | ID=MS.gene051655.t1.exon2;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5270392 | 5270499 | 5270392 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| chr1.3 | exon | 5269485 | 5269729 | 5269485 | ID=MS.gene051655.t1.exon3;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5269485 | 5269729 | 5269485 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| chr1.3 | exon | 5268395 | 5268431 | 5268395 | ID=MS.gene051655.t1.exon4;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5268395 | 5268431 | 5268395 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| chr1.3 | exon | 5267354 | 5267411 | 5267354 | ID=MS.gene051655.t1.exon5;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5267354 | 5267411 | 5267354 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| chr1.3 | exon | 5267187 | 5267266 | 5267187 | ID=MS.gene051655.t1.exon6;Parent=MS.gene051655.t1 |
| chr1.3 | CDS | 5267187 | 5267266 | 5267187 | ID=cds.MS.gene051655.t1;Parent=MS.gene051655.t1 |
| Gene Sequence |
| Protein sequence |
