Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58460.t1 | XP_003609033.1 | 96.3 | 574 | 21 | 0 | 5 | 578 | 1 | 574 | 4.30E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58460.t1 | Q8L4D8 | 46.7 | 604 | 265 | 14 | 5 | 578 | 1 | 577 | 1.6e-47 | 192.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58460.t1 | B7FLN4 | 96.3 | 574 | 21 | 0 | 5 | 578 | 1 | 574 | 3.1e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053348 | MS.gene58460 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene054552 | MS.gene58460 | 0.818061 | 2.39E-52 | -1.69E-46 |
| MS.gene054593 | MS.gene58460 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene58460 | 0.804797 | 1.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 138 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGCACAGGCTGCTTTC+AGG | 0.155116 | 8.4:+18903879 | MS.gene58460:CDS |
| AACAGTCTCTTCTAAATCTT+TGG | 0.164446 | 8.4:-18907669 | None:intergenic |
| TGCTTCATCAACTACAATTA+TGG | 0.198086 | 8.4:+18906980 | MS.gene58460:CDS |
| GGCTGCTTTCAGGGGTTATT+TGG | 0.216492 | 8.4:+18903889 | MS.gene58460:CDS |
| TCCTCTTGGTATATTTGATT+TGG | 0.230375 | 8.4:-18903140 | None:intergenic |
| GAGCCTTAAAAGGCATAATA+AGG | 0.247639 | 8.4:+18904692 | MS.gene58460:CDS |
| ATTTCAGGGTTTGCTTGTGC+TGG | 0.273773 | 8.4:-18907221 | None:intergenic |
| GACCAACTAAGGACTGAATT+TGG | 0.278720 | 8.4:-18907032 | None:intergenic |
| CTTCCATCTTGTACGACTTT+TGG | 0.286258 | 8.4:-18907899 | None:intergenic |
| GCTTCCAAGGTTTCGGAAAC+TGG | 0.304932 | 8.4:+18903683 | MS.gene58460:CDS |
| GCTGGTCAGCATGTCGGTTT+TGG | 0.307481 | 8.4:+18907060 | MS.gene58460:CDS |
| TCCTCCAGCTTCATCTTCTC+TGG | 0.324193 | 8.4:-18903848 | None:intergenic |
| GTCAAGCCAATTGCTATATC+TGG | 0.328979 | 8.4:+18905769 | MS.gene58460:CDS |
| AATTTCCTTGCGTTTCGTTT+TGG | 0.330220 | 8.4:-18907251 | None:intergenic |
| AGAGCATTTAGAGCCTTAAA+AGG | 0.332450 | 8.4:+18904682 | MS.gene58460:CDS |
| TGAGATTCCAAAGCCTCATT+TGG | 0.338407 | 8.4:+18907397 | MS.gene58460:CDS |
| TGACACTCCAAACAGTTATC+AGG | 0.339226 | 8.4:+18907568 | MS.gene58460:CDS |
| AGTTGTTGCTTCCAAGGTTT+CGG | 0.342846 | 8.4:+18903676 | MS.gene58460:CDS |
| TGGATCAAAACTGTACTGTT+TGG | 0.347377 | 8.4:+18903106 | MS.gene58460:CDS |
| GGTTTGCTTGTGCTGGGGCT+AGG | 0.348635 | 8.4:-18907214 | None:intergenic |
| TGGGTAAATCACCAGGAAAA+TGG | 0.351546 | 8.4:+18903086 | MS.gene58460:CDS |
| TTTCAGGGTTTGCTTGTGCT+GGG | 0.354870 | 8.4:-18907220 | None:intergenic |
| TCCGACGATACCAAGTTATA+TGG | 0.373995 | 8.4:+18907832 | MS.gene58460:CDS |
| TTCCTTTCTGACCATTTCAT+TGG | 0.381888 | 8.4:-18907474 | None:intergenic |
| GGAACTGCAGCTTCAACAAC+TGG | 0.388236 | 8.4:-18907359 | None:intergenic |
| TCCTAGAGATTTAGTTACTA+AGG | 0.389207 | 8.4:+18907538 | MS.gene58460:CDS |
| TTCCCCAACCCAAGAAAATC+CGG | 0.393030 | 8.4:+18907090 | MS.gene58460:CDS |
| AACTGTACTGTTTGGGAAGA+AGG | 0.396388 | 8.4:+18903114 | MS.gene58460:CDS |
| GCTACTTTGTGCTGTATGTA+TGG | 0.397544 | 8.4:+18904760 | MS.gene58460:CDS |
| ACAGTCTCTTCTAAATCTTT+GGG | 0.399625 | 8.4:-18907668 | None:intergenic |
| GGATCAAAACTGTACTGTTT+GGG | 0.400627 | 8.4:+18903107 | MS.gene58460:CDS |
| AGCAATTGGCTTGACAGGTT+TGG | 0.401611 | 8.4:-18905761 | None:intergenic |
| GATATAGCAATTGGCTTGAC+AGG | 0.403504 | 8.4:-18905766 | None:intergenic |
| TGCTGTTAGTTGAAGATGGC+AGG | 0.407732 | 8.4:-18907952 | None:intergenic |
| CTTCTTTATTCTCCAGCTCC+AGG | 0.410650 | 8.4:-18903754 | None:intergenic |
| AGTGGTGCATCTTGATCAAC+AGG | 0.413486 | 8.4:-18903821 | None:intergenic |
| ACATTCACCTGATAACTGTT+TGG | 0.414315 | 8.4:-18907575 | None:intergenic |
| ACACAGAGACCAGTTCATTC+AGG | 0.415046 | 8.4:+18907998 | MS.gene58460:CDS |
| CAGTTCATTCAGGTGGTAAA+GGG | 0.417415 | 8.4:+18908008 | MS.gene58460:CDS |
| AAGCAGGGTAATATTTCAAC+TGG | 0.419215 | 8.4:+18907131 | MS.gene58460:CDS |
| AAAAGCACAGGCTGCTTTCA+GGG | 0.427784 | 8.4:+18903880 | MS.gene58460:CDS |
| CCAACCCTCAGATCCTTTGC+TGG | 0.428090 | 8.4:+18907280 | MS.gene58460:CDS |
| CCAGTTCATTCAGGTGGTAA+AGG | 0.435174 | 8.4:+18908007 | MS.gene58460:CDS |
| GGTCATTAGTTCCAATGAAA+TGG | 0.435488 | 8.4:+18907463 | MS.gene58460:CDS |
| AGATTTACCTCTCTTCCTCT+TGG | 0.436650 | 8.4:-18903154 | None:intergenic |
| CTGCGTTTGCAATATGTTTG+TGG | 0.443685 | 8.4:+18907005 | MS.gene58460:CDS |
| TTAGAAGCTTGTTAATCAAA+AGG | 0.445914 | 8.4:+18903649 | MS.gene58460:intron |
| TCCAAAGCCTCATTTGGAAA+AGG | 0.453121 | 8.4:+18907403 | MS.gene58460:CDS |
| TTAAGGCTCTAAATGCTCTC+CGG | 0.456342 | 8.4:-18904678 | None:intergenic |
| GGAAGGAGTTGTTGCTTCCA+AGG | 0.457830 | 8.4:+18903670 | MS.gene58460:CDS |
| GTGTCAATTTCTTGATCTCC+AGG | 0.458269 | 8.4:-18903791 | None:intergenic |
| TCCTTAGTTGGTCTGAGCGC+TGG | 0.459646 | 8.4:+18907042 | MS.gene58460:CDS |
| ATCCAAATTCAGTCCTTAGT+TGG | 0.459833 | 8.4:+18907030 | MS.gene58460:CDS |
| TGTAATGTAGGTTACCTTAC+GGG | 0.461722 | 8.4:-18905824 | None:intergenic |
| ATAATTAGAAAGTCTGATGT+TGG | 0.475015 | 8.4:+18904817 | MS.gene58460:CDS |
| ACCAGCGCTCAGACCAACTA+AGG | 0.486273 | 8.4:-18907043 | None:intergenic |
| AACCTCAACTGGAGCTAAGC+AGG | 0.486487 | 8.4:+18907781 | MS.gene58460:CDS |
| CCTGTGGGTACGTTTAGACT+TGG | 0.491203 | 8.4:-18907168 | None:intergenic |
| CTAGGAGTAATTCCCATCTC+TGG | 0.493836 | 8.4:-18907515 | None:intergenic |
| TCAGTTGCTGCCATATAACT+TGG | 0.495488 | 8.4:-18907842 | None:intergenic |
| ACAGATCTTGGTATCACAAT+GGG | 0.501778 | 8.4:+18903067 | None:intergenic |
| AATTCCCATCTCTGGCTCAC+TGG | 0.502421 | 8.4:-18907507 | None:intergenic |
| ATCTGCCAAGGCAAAATTGA+GGG | 0.504867 | 8.4:+18907865 | MS.gene58460:CDS |
| GAAAATTCTCACTTAACAAA+CGG | 0.505003 | 8.4:+18907701 | MS.gene58460:CDS |
| CCTTTACCACCTGAATGAAC+TGG | 0.505962 | 8.4:-18908007 | None:intergenic |
| AGCACTTATTCGTGGGCACT+TGG | 0.506188 | 8.4:+18904720 | MS.gene58460:CDS |
| AAATTACAAGCACTTGTTCG+TGG | 0.506547 | 8.4:+18904790 | MS.gene58460:CDS |
| AAGCAGGAACGTGCAGAGAA+TGG | 0.508732 | 8.4:+18907797 | MS.gene58460:CDS |
| TGAACTGGTCTCTGTGTCCT+AGG | 0.511569 | 8.4:-18907992 | None:intergenic |
| GCCATATAACTTGGTATCGT+CGG | 0.514618 | 8.4:-18907833 | None:intergenic |
| AATCACAAGGAAGATCAAAC+AGG | 0.515319 | 8.4:+18907731 | MS.gene58460:CDS |
| CTCCAGGTCTTCCACATGTA+CGG | 0.516788 | 8.4:-18903738 | None:intergenic |
| TTCCAATGAAATGGTCAGAA+AGG | 0.520689 | 8.4:+18907472 | MS.gene58460:CDS |
| TAAGGCTCTAAATGCTCTCC+GGG | 0.522087 | 8.4:-18904677 | None:intergenic |
| TCTTCTTCTAGAGATGGAAA+TGG | 0.527477 | 8.4:+18908055 | MS.gene58460:CDS |
| TTCATCTTCTCTGGATCAAG+TGG | 0.527575 | 8.4:-18903839 | None:intergenic |
| TTACTTGTAATATCTGTCAA+AGG | 0.531696 | 8.4:-18907608 | None:intergenic |
| TGCCGTACATGTGGAAGACC+TGG | 0.534296 | 8.4:+18903736 | MS.gene58460:CDS |
| CCAGCAAAGGATCTGAGGGT+TGG | 0.534674 | 8.4:-18907280 | None:intergenic |
| CACAAACATATTGCAAACGC+AGG | 0.535386 | 8.4:-18907004 | None:intergenic |
| TTCAGGGTTTGCTTGTGCTG+GGG | 0.535737 | 8.4:-18907219 | None:intergenic |
| GCAGTATCTTCTTCTAGAGA+TGG | 0.536198 | 8.4:+18908049 | MS.gene58460:CDS |
| ATGTACGGCAATAGTGTTGG+AGG | 0.539466 | 8.4:-18903723 | None:intergenic |
| AAGCTTGTTAATCAAAAGGA+AGG | 0.541536 | 8.4:+18903653 | MS.gene58460:CDS |
| GTGCAATCTATTGAAGCTCC+AGG | 0.542766 | 8.4:+18904858 | MS.gene58460:CDS |
| GTTAACCAGTGAGCCAGAGA+TGG | 0.546318 | 8.4:+18907502 | MS.gene58460:CDS |
| AGTGTTGGTGTTTCAGAACA+AGG | 0.547511 | 8.4:+18907440 | MS.gene58460:CDS |
| AAAGGATCTGAGGGTTGGCT+AGG | 0.547702 | 8.4:-18907275 | None:intergenic |
| ATCTCAGATTCAACTTCTGA+CGG | 0.550258 | 8.4:-18907380 | None:intergenic |
| TAAACCAGTTTCCGAAACCT+TGG | 0.551513 | 8.4:-18903687 | None:intergenic |
| TGATCCAGAGAAGATGAAGC+TGG | 0.553280 | 8.4:+18903844 | MS.gene58460:CDS |
| AATCTGCCAAGGCAAAATTG+AGG | 0.553435 | 8.4:+18907864 | MS.gene58460:CDS |
| CACATGTACGGCAATAGTGT+TGG | 0.554159 | 8.4:-18903726 | None:intergenic |
| AGGTTACAAGCACTTATTCG+TGG | 0.554181 | 8.4:+18904712 | MS.gene58460:CDS |
| ACCTTCTCAAGCTCAATCTG+TGG | 0.557585 | 8.4:-18907308 | None:intergenic |
| TTCCTGCTTAGCTCCAGTTG+AGG | 0.558184 | 8.4:-18907783 | None:intergenic |
| CTGAGCGCTGGTCAGCATGT+CGG | 0.559916 | 8.4:+18907054 | MS.gene58460:CDS |
| AAGGCAAAATTGAGGGCTCA+AGG | 0.562761 | 8.4:+18907872 | MS.gene58460:CDS |
| AGCAAACACTTTCACCCGTA+AGG | 0.563747 | 8.4:+18905810 | MS.gene58460:CDS |
| GTAACTAAATCTCTAGGACT+AGG | 0.566188 | 8.4:-18907533 | None:intergenic |
| TCACCAAAAGTCGTACAAGA+TGG | 0.566333 | 8.4:+18907896 | MS.gene58460:CDS |
| GAAACAGTTGCCTCAAGTGT+TGG | 0.566616 | 8.4:+18907425 | MS.gene58460:CDS |
| TTCTGAAACACCAACACTTG+AGG | 0.567359 | 8.4:-18907435 | None:intergenic |
| ACATGTGGAAGACCTGGAGC+TGG | 0.572908 | 8.4:+18903742 | MS.gene58460:CDS |
| TTAACCAGTGAGCCAGAGAT+GGG | 0.573847 | 8.4:+18907503 | MS.gene58460:CDS |
| TTGCAGTAGGAAGCTTCCTG+TGG | 0.578038 | 8.4:-18907184 | None:intergenic |
| TCCACAGATTGAGCTTGAGA+AGG | 0.582817 | 8.4:+18907307 | MS.gene58460:CDS |
| GTGTTGGTGTTTCAGAACAA+GGG | 0.584151 | 8.4:+18907441 | MS.gene58460:CDS |
| TCCCCAACCCAAGAAAATCC+GGG | 0.584450 | 8.4:+18907091 | MS.gene58460:CDS |
| ATCACAATGGGTAAATCACC+AGG | 0.589006 | 8.4:+18903079 | MS.gene58460:CDS |
| GGAAGCAGCTACAAAAGCAC+AGG | 0.590707 | 8.4:+18903868 | MS.gene58460:CDS |
| GCTGTTAGTTGAAGATGGCA+GGG | 0.593744 | 8.4:-18907951 | None:intergenic |
| GGTTAAACGTAACTTGCGAA+AGG | 0.597673 | 8.4:+18907328 | MS.gene58460:CDS |
| AAACAGTTATCAGGTGAATG+TGG | 0.598436 | 8.4:+18907577 | MS.gene58460:CDS |
| GGTTACAAGCACTTATTCGT+GGG | 0.599006 | 8.4:+18904713 | MS.gene58460:CDS |
| AAATATACCAAGAGGAAGAG+AGG | 0.602057 | 8.4:+18903147 | MS.gene58460:CDS |
| TACAGATCTTGGTATCACAA+TGG | 0.603086 | 8.4:+18903066 | None:intergenic |
| CAACACTATTGCCGTACATG+TGG | 0.604171 | 8.4:+18903727 | MS.gene58460:CDS |
| TCCTTAGTAACTAAATCTCT+AGG | 0.610351 | 8.4:-18907539 | None:intergenic |
| TAGAGATTTAGTTACTAAGG+AGG | 0.612038 | 8.4:+18907541 | MS.gene58460:CDS |
| TGTTGGTGTTTCAGAACAAG+GGG | 0.614686 | 8.4:+18907442 | MS.gene58460:CDS |
| AAAGCACAGGCTGCTTTCAG+GGG | 0.616450 | 8.4:+18903881 | MS.gene58460:CDS |
| GCTAGGTCAAAATTTGCAGT+AGG | 0.616714 | 8.4:-18907197 | None:intergenic |
| TGCAGTAGGAAGCTTCCTGT+GGG | 0.618293 | 8.4:-18907183 | None:intergenic |
| ACGGCAATAGTGTTGGAGGA+TGG | 0.623994 | 8.4:-18903719 | None:intergenic |
| GGCAGCAACTGAATCTGCCA+AGG | 0.626694 | 8.4:+18907853 | MS.gene58460:CDS |
| GATCAAGAAATTGACACAGT+GGG | 0.629104 | 8.4:+18903797 | MS.gene58460:CDS |
| AGTTCATTCAGGTGGTAAAG+GGG | 0.630964 | 8.4:+18908009 | MS.gene58460:CDS |
| TCCAAATCAAATATACCAAG+AGG | 0.633885 | 8.4:+18903139 | MS.gene58460:CDS |
| ACAAACATATTGCAAACGCA+GGG | 0.640060 | 8.4:-18907003 | None:intergenic |
| AAATCAGTTCGCATTCACCT+AGG | 0.645810 | 8.4:+18907975 | MS.gene58460:CDS |
| CCAAGTCTAAACGTACCCAC+AGG | 0.666876 | 8.4:+18907168 | MS.gene58460:CDS |
| GAACTGCAGCTTCAACAACT+GGG | 0.667414 | 8.4:-18907358 | None:intergenic |
| AAACGGAGATTTGAATCACA+AGG | 0.671822 | 8.4:+18907718 | MS.gene58460:CDS |
| GTTCATTCAGGTGGTAAAGG+GGG | 0.677817 | 8.4:+18908010 | MS.gene58460:CDS |
| CAGAGACCAGTTCATTCAGG+TGG | 0.680292 | 8.4:+18908001 | MS.gene58460:CDS |
| TCCAGAGAAGATGAAGCTGG+AGG | 0.681945 | 8.4:+18903847 | MS.gene58460:CDS |
| AGATCAAGAAATTGACACAG+TGG | 0.734130 | 8.4:+18903796 | MS.gene58460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATAATAAAAAAAAAA+GGG | - | chr8.4:18905107-18905126 | None:intergenic | 0.0% |
| !! | TAAATTATAATAAAAAAAAA+AGG | - | chr8.4:18905108-18905127 | None:intergenic | 0.0% |
| !! | ATTATAATAAAAAAAAAAGG+GGG | - | chr8.4:18905105-18905124 | None:intergenic | 10.0% |
| !! | ATCTTTAATAGAACAATTTA+CGG | - | chr8.4:18905274-18905293 | None:intergenic | 15.0% |
| !! | TATTAAATACACAAAAGATA+CGG | - | chr8.4:18906034-18906053 | None:intergenic | 15.0% |
| !! | TTATTATCGAATTGAAATTA+AGG | - | chr8.4:18904239-18904258 | None:intergenic | 15.0% |
| !!! | ATTTATTGGCATTATTTTTT+TGG | + | chr8.4:18904576-18904595 | MS.gene58460:intron | 15.0% |
| !!! | CTTAATTTGAAATTGATTTT+GGG | + | chr8.4:18904268-18904287 | MS.gene58460:intron | 15.0% |
| !!! | TCTTAATTTGAAATTGATTT+TGG | + | chr8.4:18904267-18904286 | MS.gene58460:intron | 15.0% |
| !!! | TTTTAATCTTATTAAGAAGT+TGG | + | chr8.4:18905464-18905483 | MS.gene58460:intron | 15.0% |
| !! | AAAATATAGTAAAAGACATC+AGG | - | chr8.4:18903626-18903645 | None:intergenic | 20.0% |
| !! | AAGACAAACTATAAAAATGT+AGG | - | chr8.4:18904209-18904228 | None:intergenic | 20.0% |
| !! | AATAATTACGTGTATAATCT+TGG | - | chr8.4:18906424-18906443 | None:intergenic | 20.0% |
| !! | AATGCCAATAAATTAAAAAC+TGG | - | chr8.4:18904569-18904588 | None:intergenic | 20.0% |
| !! | ACATTATAATTTATTTGTCG+AGG | + | chr8.4:18904909-18904928 | MS.gene58460:intron | 20.0% |
| !! | ACGAATAATATATAGATCTA+AGG | - | chr8.4:18906087-18906106 | None:intergenic | 20.0% |
| !! | AGACAAACTATAAAAATGTA+GGG | - | chr8.4:18904208-18904227 | None:intergenic | 20.0% |
| !! | ATTATAATGTAGAGAGAAAA+TGG | - | chr8.4:18904899-18904918 | None:intergenic | 20.0% |
| !! | ATTATAATTTATTTGTCGAG+GGG | + | chr8.4:18904911-18904930 | MS.gene58460:intron | 20.0% |
| !! | CATTATAATTTATTTGTCGA+GGG | + | chr8.4:18904910-18904929 | MS.gene58460:intron | 20.0% |
| !! | CGAATAAAATTTAAGAATTG+TGG | - | chr8.4:18903424-18903443 | None:intergenic | 20.0% |
| !! | TCTTTAATAGAACAATTTAC+GGG | - | chr8.4:18905273-18905292 | None:intergenic | 20.0% |
| !! | TTAGATCTATATATTATTCG+TGG | + | chr8.4:18906086-18906105 | MS.gene58460:intron | 20.0% |
| !!! | AGATTTTTTTTTTCTTTCTG+AGG | + | chr8.4:18905520-18905539 | MS.gene58460:intron | 20.0% |
| !!! | GAATTTTTAACTATAAACCA+TGG | + | chr8.4:18903980-18903999 | MS.gene58460:intron | 20.0% |
| !!! | GATTTTTTTTTTCTTTCTGA+GGG | + | chr8.4:18905521-18905540 | MS.gene58460:intron | 20.0% |
| !!! | TTTTTCATCTCTTCATATAT+TGG | + | chr8.4:18906309-18906328 | MS.gene58460:intron | 20.0% |
| ! | AAATATGTCGATGAAAGAAT+TGG | + | chr8.4:18904535-18904554 | MS.gene58460:intron | 25.0% |
| ! | AATCTAATTGATGTGAAAAC+CGG | - | chr8.4:18906738-18906757 | None:intergenic | 25.0% |
| ! | ATAATTAGAAAGTCTGATGT+TGG | + | chr8.4:18904817-18904836 | MS.gene58460:CDS | 25.0% |
| ! | ATCCATTGAAGTTACATTAT+TGG | + | chr8.4:18903260-18903279 | MS.gene58460:intron | 25.0% |
| ! | CACATTCCTATTATTTCAAA+CGG | - | chr8.4:18906237-18906256 | None:intergenic | 25.0% |
| ! | CATTCAATAAATTATGCATG+TGG | - | chr8.4:18903229-18903248 | None:intergenic | 25.0% |
| ! | CCTTTAAATTCTTACCAAAA+CGG | + | chr8.4:18903323-18903342 | MS.gene58460:intron | 25.0% |
| ! | GAAAATTCTCACTTAACAAA+CGG | + | chr8.4:18907701-18907720 | MS.gene58460:CDS | 25.0% |
| ! | GACAAACTATAAAAATGTAG+GGG | - | chr8.4:18904207-18904226 | None:intergenic | 25.0% |
| ! | TAAAGATCATAATTCTTGCT+GGG | + | chr8.4:18905287-18905306 | MS.gene58460:intron | 25.0% |
| ! | TCGTTAACTTCATTTACAAA+CGG | + | chr8.4:18903466-18903485 | MS.gene58460:intron | 25.0% |
| ! | TTAAAGATCATAATTCTTGC+TGG | + | chr8.4:18905286-18905305 | MS.gene58460:intron | 25.0% |
| ! | TTACTTGTAATATCTGTCAA+AGG | - | chr8.4:18907611-18907630 | None:intergenic | 25.0% |
| !! | AAATTCTTATGAGTGTCTTT+TGG | + | chr8.4:18905593-18905612 | MS.gene58460:intron | 25.0% |
| !! | ATTTGCTACAACTAGAATTA+TGG | + | chr8.4:18905419-18905438 | MS.gene58460:intron | 25.0% |
| !! | ATTTTACCAGATATAGCAAT+TGG | - | chr8.4:18905778-18905797 | None:intergenic | 25.0% |
| !! | CTCTGTATTGATAATTGATA+TGG | + | chr8.4:18906152-18906171 | MS.gene58460:intron | 25.0% |
| !! | GTTTTATAGATATTTTCCGA+TGG | + | chr8.4:18903925-18903944 | MS.gene58460:intron | 25.0% |
| !! | TAACCTTATTATGCCTTTTA+AGG | - | chr8.4:18904698-18904717 | None:intergenic | 25.0% |
| !! | TAATTTTGCCTTAACTATCA+TGG | - | chr8.4:18903186-18903205 | None:intergenic | 25.0% |
| !! | TCATAATTTTGCAGACTAAA+AGG | - | chr8.4:18903962-18903981 | None:intergenic | 25.0% |
| !! | TGTATTGATAATTGATATGG+TGG | + | chr8.4:18906155-18906174 | MS.gene58460:intron | 25.0% |
| !!! | ATTTAGCTCTAATTTCAGTT+TGG | - | chr8.4:18905220-18905239 | None:intergenic | 25.0% |
| !!! | CGTTTTGGTAAGAATTTAAA+GGG | - | chr8.4:18903325-18903344 | None:intergenic | 25.0% |
| !!! | GTTTTGGTTTTTCAATTTCA+GGG | - | chr8.4:18907238-18907257 | None:intergenic | 25.0% |
| !!! | TATTGGCATTATTTTTTTGG+TGG | + | chr8.4:18904579-18904598 | MS.gene58460:intron | 25.0% |
| !!! | TGGACCAGTTTTTAATTTAT+TGG | + | chr8.4:18904562-18904581 | MS.gene58460:intron | 25.0% |
| !!! | TGTCATGTCATATTTTAGTT+TGG | + | chr8.4:18906696-18906715 | MS.gene58460:intron | 25.0% |
| !!! | TTAGAAGCTTGTTAATCAAA+AGG | + | chr8.4:18903649-18903668 | MS.gene58460:intron | 25.0% |
| !!! | TTATTGAAAAGTATCACTGT+TGG | + | chr8.4:18903545-18903564 | MS.gene58460:intron | 25.0% |
| !!! | TTCGTTTTTAACTTCATCAT+CGG | - | chr8.4:18907648-18907667 | None:intergenic | 25.0% |
| !!! | TTTAGCTCTAATTTCAGTTT+GGG | - | chr8.4:18905219-18905238 | None:intergenic | 25.0% |
| AACAAGTCAGTGATAAGAAA+GGG | + | chr8.4:18905657-18905676 | MS.gene58460:intron | 30.0% | |
| AACAGTCTCTTCTAAATCTT+TGG | - | chr8.4:18907672-18907691 | None:intergenic | 30.0% | |
| AATGCAAATGTCTCTATTGA+AGG | + | chr8.4:18904654-18904673 | MS.gene58460:intron | 30.0% | |
| ACACATATATGGTGTAATGT+AGG | - | chr8.4:18905839-18905858 | None:intergenic | 30.0% | |
| ACAGTCTCTTCTAAATCTTT+GGG | - | chr8.4:18907671-18907690 | None:intergenic | 30.0% | |
| AGAAATTATAGGAATGTAGG+GGG | + | chr8.4:18906182-18906201 | MS.gene58460:intron | 30.0% | |
| AGAGACATTTGCATTAGTTA+AGG | - | chr8.4:18904649-18904668 | None:intergenic | 30.0% | |
| AGTCTAATTGATGTGAAAAC+CGG | - | chr8.4:18906835-18906854 | None:intergenic | 30.0% | |
| ATAATAGGAATGTGGTTGTT+AGG | + | chr8.4:18906243-18906262 | MS.gene58460:intron | 30.0% | |
| ATAGAACAATTTACGGGATA+AGG | - | chr8.4:18905267-18905286 | None:intergenic | 30.0% | |
| ATCTAATTGATGTGAAAACC+GGG | - | chr8.4:18906737-18906756 | None:intergenic | 30.0% | |
| ATTCCTATTATTTCAAACGG+TGG | - | chr8.4:18906234-18906253 | None:intergenic | 30.0% | |
| CACCAATAATGTAACTTCAA+TGG | - | chr8.4:18903265-18903284 | None:intergenic | 30.0% | |
| CACTTCAAAATATGTTTCCA+TGG | - | chr8.4:18904000-18904019 | None:intergenic | 30.0% | |
| CATTCAACTCTATAAAAACC+CGG | + | chr8.4:18906813-18906832 | MS.gene58460:intron | 30.0% | |
| CTTATTGTTAAAGACAAGCA+TGG | + | chr8.4:18905546-18905565 | MS.gene58460:intron | 30.0% | |
| GACATGACATAACCAAATAA+TGG | - | chr8.4:18906685-18906704 | None:intergenic | 30.0% | |
| GAGAAATTATAGGAATGTAG+GGG | + | chr8.4:18906181-18906200 | MS.gene58460:intron | 30.0% | |
| GCATAGTTATCACACATATA+TGG | - | chr8.4:18905850-18905869 | None:intergenic | 30.0% | |
| GGAGAAATTATAGGAATGTA+GGG | + | chr8.4:18906180-18906199 | MS.gene58460:intron | 30.0% | |
| GTAAGAATTTAAAGGGTGAA+CGG | - | chr8.4:18903318-18903337 | None:intergenic | 30.0% | |
| TAACTGGGTTTAATTCACAT+GGG | + | chr8.4:18906551-18906570 | MS.gene58460:intron | 30.0% | |
| TAGAGATTTAGTTACTAAGG+AGG | + | chr8.4:18907541-18907560 | MS.gene58460:CDS | 30.0% | |
| TCCAAATCAAATATACCAAG+AGG | + | chr8.4:18903139-18903158 | MS.gene58460:CDS | 30.0% | |
| TCCTAGAGATTTAGTTACTA+AGG | + | chr8.4:18907538-18907557 | MS.gene58460:CDS | 30.0% | |
| TCCTCTTGGTATATTTGATT+TGG | - | chr8.4:18903143-18903162 | None:intergenic | 30.0% | |
| TCCTTAGTAACTAAATCTCT+AGG | - | chr8.4:18907542-18907561 | None:intergenic | 30.0% | |
| TCTCTATTTAGAGAACATGA+AGG | - | chr8.4:18904341-18904360 | None:intergenic | 30.0% | |
| TGAGAGTAATTTGATATGAC+CGG | + | chr8.4:18903590-18903609 | MS.gene58460:intron | 30.0% | |
| TGATTATTGACACTATTCAC+AGG | + | chr8.4:18906523-18906542 | MS.gene58460:intron | 30.0% | |
| TGCTTCATCAACTACAATTA+TGG | + | chr8.4:18906980-18906999 | MS.gene58460:CDS | 30.0% | |
| TGGATTTGGAAATAATAACC+TGG | - | chr8.4:18904879-18904898 | None:intergenic | 30.0% | |
| TGGTTAAATCCAAAAAAACC+CGG | + | chr8.4:18906716-18906735 | MS.gene58460:intron | 30.0% | |
| TGTAACTTCAATGGATGTTT+AGG | - | chr8.4:18903256-18903275 | None:intergenic | 30.0% | |
| TGTGGTTTAATAATGAACAG+AGG | - | chr8.4:18903211-18903230 | None:intergenic | 30.0% | |
| TTCCTATTATTTCAAACGGT+GGG | - | chr8.4:18906233-18906252 | None:intergenic | 30.0% | |
| ! | AAATTCTTCTGATTAGTCCA+TGG | + | chr8.4:18905145-18905164 | MS.gene58460:intron | 30.0% |
| ! | AATTCTTCTGATTAGTCCAT+GGG | + | chr8.4:18905146-18905165 | MS.gene58460:intron | 30.0% |
| ! | ATGTAGAGAGAAAATGGATT+TGG | - | chr8.4:18904893-18904912 | None:intergenic | 30.0% |
| ! | ATTGATAATTGATATGGTGG+AGG | + | chr8.4:18906158-18906177 | MS.gene58460:intron | 30.0% |
| ! | CGTTTGAAATAATAGGAATG+TGG | + | chr8.4:18906235-18906254 | MS.gene58460:intron | 30.0% |
| ! | TTCGATACTTTTACACTTCA+TGG | + | chr8.4:18903440-18903459 | MS.gene58460:intron | 30.0% |
| ! | TTGATAATTGATATGGTGGA+GGG | + | chr8.4:18906159-18906178 | MS.gene58460:intron | 30.0% |
| !! | AAGCTTGTTAATCAAAAGGA+AGG | + | chr8.4:18903653-18903672 | MS.gene58460:CDS | 30.0% |
| !! | ATCTTTGAAGTGAGAAAGTA+AGG | + | chr8.4:18906774-18906793 | MS.gene58460:intron | 30.0% |
| !! | CCGTTTTGGTAAGAATTTAA+AGG | - | chr8.4:18903326-18903345 | None:intergenic | 30.0% |
| !! | TCCATTAATTTGTTCTGAGT+GGG | + | chr8.4:18906651-18906670 | MS.gene58460:intron | 30.0% |
| !! | TCCTTGCTGTTCAAATAAAT+GGG | + | chr8.4:18905383-18905402 | MS.gene58460:intron | 30.0% |
| !!! | ATTTTGCTGTTAGTTGAAGA+TGG | - | chr8.4:18907959-18907978 | None:intergenic | 30.0% |
| !!! | CGTTTTGGTTTTTCAATTTC+AGG | - | chr8.4:18907239-18907258 | None:intergenic | 30.0% |
| AAAAACCAAAACGAAACGCA+AGG | + | chr8.4:18907246-18907265 | MS.gene58460:CDS | 35.0% | |
| AAACAGTTATCAGGTGAATG+TGG | + | chr8.4:18907577-18907596 | MS.gene58460:CDS | 35.0% | |
| AAACGGAGATTTGAATCACA+AGG | + | chr8.4:18907718-18907737 | MS.gene58460:CDS | 35.0% | |
| AAATATACCAAGAGGAAGAG+AGG | + | chr8.4:18903147-18903166 | MS.gene58460:CDS | 35.0% | |
| AAATTACAAGCACTTGTTCG+TGG | + | chr8.4:18904790-18904809 | MS.gene58460:CDS | 35.0% | |
| AACTGGGTTTAATTCACATG+GGG | + | chr8.4:18906552-18906571 | MS.gene58460:intron | 35.0% | |
| AAGCAGGGTAATATTTCAAC+TGG | + | chr8.4:18907131-18907150 | MS.gene58460:CDS | 35.0% | |
| AATCACAAGGAAGATCAAAC+AGG | + | chr8.4:18907731-18907750 | MS.gene58460:CDS | 35.0% | |
| AATTCTCGAAAGCTTCTTGT+TGG | + | chr8.4:18904390-18904409 | MS.gene58460:intron | 35.0% | |
| ACAAACATATTGCAAACGCA+GGG | - | chr8.4:18907006-18907025 | None:intergenic | 35.0% | |
| ACAGAGATCACTTGAGTAAT+TGG | - | chr8.4:18906138-18906157 | None:intergenic | 35.0% | |
| ACATTCACCTGATAACTGTT+TGG | - | chr8.4:18907578-18907597 | None:intergenic | 35.0% | |
| ACCCATTTATTTGAACAGCA+AGG | - | chr8.4:18905387-18905406 | None:intergenic | 35.0% | |
| ACTAAGTCTCAGAAAAAGCA+GGG | + | chr8.4:18907116-18907135 | MS.gene58460:CDS | 35.0% | |
| AGAGATCACTTGAGTAATTG+GGG | - | chr8.4:18906136-18906155 | None:intergenic | 35.0% | |
| AGATCAAGAAATTGACACAG+TGG | + | chr8.4:18903796-18903815 | MS.gene58460:CDS | 35.0% | |
| AGCAATCATGCATAAAACAG+AGG | + | chr8.4:18906061-18906080 | MS.gene58460:intron | 35.0% | |
| AGGACTTACTGTGCAAATAA+AGG | + | chr8.4:18905334-18905353 | MS.gene58460:intron | 35.0% | |
| ATATTATTCGTGGCATCTCA+GGG | + | chr8.4:18906096-18906115 | MS.gene58460:intron | 35.0% | |
| ATCCAAATTCAGTCCTTAGT+TGG | + | chr8.4:18907030-18907049 | MS.gene58460:CDS | 35.0% | |
| ATCTCAGATTCAACTTCTGA+CGG | - | chr8.4:18907383-18907402 | None:intergenic | 35.0% | |
| CAACAAGTCAGTGATAAGAA+AGG | + | chr8.4:18905656-18905675 | MS.gene58460:intron | 35.0% | |
| CAGAGATCACTTGAGTAATT+GGG | - | chr8.4:18906137-18906156 | None:intergenic | 35.0% | |
| CTAACTGGGTTTAATTCACA+TGG | + | chr8.4:18906550-18906569 | MS.gene58460:intron | 35.0% | |
| CTCTTGTGTAAAACAAGGTA+AGG | + | chr8.4:18905005-18905024 | MS.gene58460:intron | 35.0% | |
| CTGTAATGCCATGATAGTTA+AGG | + | chr8.4:18903175-18903194 | MS.gene58460:intron | 35.0% | |
| CTTCTATTACAATTTGCCTC+TGG | + | chr8.4:18906934-18906953 | MS.gene58460:intron | 35.0% | |
| GAAACAACAAATAGATCCAG+AGG | - | chr8.4:18906953-18906972 | None:intergenic | 35.0% | |
| GAAATTATAGGAATGTAGGG+GGG | + | chr8.4:18906183-18906202 | MS.gene58460:intron | 35.0% | |
| GATCAAGAAATTGACACAGT+GGG | + | chr8.4:18903797-18903816 | MS.gene58460:CDS | 35.0% | |
| GGATCAAAACTGTACTGTTT+GGG | + | chr8.4:18903107-18903126 | MS.gene58460:CDS | 35.0% | |
| GGATGTAATTGAGTAAAAGC+TGG | + | chr8.4:18906574-18906593 | MS.gene58460:intron | 35.0% | |
| GGGAGAAATTATAGGAATGT+AGG | + | chr8.4:18906179-18906198 | MS.gene58460:intron | 35.0% | |
| GGTCATTAGTTCCAATGAAA+TGG | + | chr8.4:18907463-18907482 | MS.gene58460:CDS | 35.0% | |
| GTCTAATTGATGTGAAAACC+GGG | - | chr8.4:18906834-18906853 | None:intergenic | 35.0% | |
| GTGTAATGTAGGTTACCTTA+CGG | - | chr8.4:18905828-18905847 | None:intergenic | 35.0% | |
| GTTGTCATAGATAGACAGAA+AGG | + | chr8.4:18903370-18903389 | MS.gene58460:intron | 35.0% | |
| TACTAAGTCTCAGAAAAAGC+AGG | + | chr8.4:18907115-18907134 | MS.gene58460:CDS | 35.0% | |
| TATATTATTCGTGGCATCTC+AGG | + | chr8.4:18906095-18906114 | MS.gene58460:intron | 35.0% | |
| TATTGACACTATTCACAGGA+AGG | + | chr8.4:18906527-18906546 | MS.gene58460:intron | 35.0% | |
| TGGATCAAAACTGTACTGTT+TGG | + | chr8.4:18903106-18903125 | MS.gene58460:CDS | 35.0% | |
| TGTAATGTAGGTTACCTTAC+GGG | - | chr8.4:18905827-18905846 | None:intergenic | 35.0% | |
| TTCCAATGAAATGGTCAGAA+AGG | + | chr8.4:18907472-18907491 | MS.gene58460:CDS | 35.0% | |
| TTCCTTTCTGACCATTTCAT+TGG | - | chr8.4:18907477-18907496 | None:intergenic | 35.0% | |
| ! | AATTTCCTTGCGTTTCGTTT+TGG | - | chr8.4:18907254-18907273 | None:intergenic | 35.0% |
| ! | ACTGTTTCCTTTTCCAAATG+AGG | - | chr8.4:18907413-18907432 | None:intergenic | 35.0% |
| ! | AGAGCATTTAGAGCCTTAAA+AGG | + | chr8.4:18904682-18904701 | MS.gene58460:CDS | 35.0% |
| ! | GAAGCAGAAAATGTTTTACC+TGG | + | chr8.4:18903773-18903792 | MS.gene58460:CDS | 35.0% |
| ! | GAATTAGTCTACATGCAACT+GGG | - | chr8.4:18906473-18906492 | None:intergenic | 35.0% |
| ! | GACATCAGGATTTTCATTAC+CGG | - | chr8.4:18903612-18903631 | None:intergenic | 35.0% |
| ! | GAGCCTTAAAAGGCATAATA+AGG | + | chr8.4:18904692-18904711 | MS.gene58460:CDS | 35.0% |
| ! | TGAATTAGTCTACATGCAAC+TGG | - | chr8.4:18906474-18906493 | None:intergenic | 35.0% |
| ! | TGGGGTTTTTGTCCATTATT+TGG | + | chr8.4:18906670-18906689 | MS.gene58460:intron | 35.0% |
| ! | TTAGTATCCCGGATTTTCTT+GGG | - | chr8.4:18907101-18907120 | None:intergenic | 35.0% |
| ! | TTCTCAATGTGTTTTTCCTC+AGG | + | chr8.4:18905735-18905754 | MS.gene58460:intron | 35.0% |
| !! | ACAGTTTTGATCCATTTTCC+TGG | - | chr8.4:18903100-18903119 | None:intergenic | 35.0% |
| !! | CCATTAATTTGTTCTGAGTG+GGG | + | chr8.4:18906652-18906671 | MS.gene58460:intron | 35.0% |
| !! | CTCCTTGCTGTTCAAATAAA+TGG | + | chr8.4:18905382-18905401 | MS.gene58460:intron | 35.0% |
| !! | GTAACTAAATCTCTAGGACT+AGG | - | chr8.4:18907536-18907555 | None:intergenic | 35.0% |
| !! | GTCCATTAATTTGTTCTGAG+TGG | + | chr8.4:18906650-18906669 | MS.gene58460:intron | 35.0% |
| !!! | ATGTGAAAACCGGGTTTTTT+TGG | - | chr8.4:18906728-18906747 | None:intergenic | 35.0% |
| !!! | CTTACCTTGTTTTACACAAG+AGG | - | chr8.4:18905007-18905026 | None:intergenic | 35.0% |
| !!! | GCTAGATCAGTTTTTTTCTG+TGG | + | chr8.4:18905868-18905887 | MS.gene58460:intron | 35.0% |
| !!! | TTTTCTGAGACTTAGTATCC+CGG | - | chr8.4:18907112-18907131 | None:intergenic | 35.0% |
| AAAAAAAAAAGGGGGCAACC+CGG | - | chr8.4:18905097-18905116 | None:intergenic | 40.0% | |
| AAATCAGTTCGCATTCACCT+AGG | + | chr8.4:18907975-18907994 | MS.gene58460:CDS | 40.0% | |
| AAATGTCTCTATTGAAGGCC+CGG | + | chr8.4:18904659-18904678 | MS.gene58460:intron | 40.0% | |
| AACTGTACTGTTTGGGAAGA+AGG | + | chr8.4:18903114-18903133 | MS.gene58460:CDS | 40.0% | |
| AAGTCAGTGATAAGAAAGGG+AGG | + | chr8.4:18905660-18905679 | MS.gene58460:intron | 40.0% | |
| AATCTGCCAAGGCAAAATTG+AGG | + | chr8.4:18907864-18907883 | MS.gene58460:CDS | 40.0% | |
| ACAATTTACGGGATAAGGCT+TGG | - | chr8.4:18905262-18905281 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+AGG | + | chr8.4:18905000-18905019 | MS.gene58460:intron | 40.0% | |
| ACATATCAGTGAGAACCAAG+AGG | - | chr8.4:18904425-18904444 | None:intergenic | 40.0% | |
| ACTGGGATTAAGAACACACA+CGG | - | chr8.4:18906456-18906475 | None:intergenic | 40.0% | |
| ACTGGGTTTAATTCACATGG+GGG | + | chr8.4:18906553-18906572 | MS.gene58460:intron | 40.0% | |
| AGATTTACCTCTCTTCCTCT+TGG | - | chr8.4:18903157-18903176 | None:intergenic | 40.0% | |
| AGGAAGCAGACATTATGCTT+TGG | + | chr8.4:18903390-18903409 | MS.gene58460:intron | 40.0% | |
| AGGTTACAAGCACTTATTCG+TGG | + | chr8.4:18904712-18904731 | MS.gene58460:CDS | 40.0% | |
| AGTCAGTGATAAGAAAGGGA+GGG | + | chr8.4:18905661-18905680 | MS.gene58460:intron | 40.0% | |
| AGTGCACTTTCTGATTGTAG+TGG | + | chr8.4:18904016-18904035 | MS.gene58460:intron | 40.0% | |
| AGTTCATTCAGGTGGTAAAG+GGG | + | chr8.4:18908009-18908028 | MS.gene58460:CDS | 40.0% | |
| ATCACAATGGGTAAATCACC+AGG | + | chr8.4:18903079-18903098 | MS.gene58460:CDS | 40.0% | |
| ATCTGCCAAGGCAAAATTGA+GGG | + | chr8.4:18907865-18907884 | MS.gene58460:CDS | 40.0% | |
| ATGCACACTAGTTGTTGCAT+TGG | + | chr8.4:18903498-18903517 | MS.gene58460:intron | 40.0% | |
| CAATCTTCAAGCTGAGGTTT+AGG | + | chr8.4:18906337-18906356 | MS.gene58460:intron | 40.0% | |
| CACAAACATATTGCAAACGC+AGG | - | chr8.4:18907007-18907026 | None:intergenic | 40.0% | |
| CAGCAACGACATTCAAAATG+AGG | + | chr8.4:18905314-18905333 | MS.gene58460:intron | 40.0% | |
| CAGTTCATTCAGGTGGTAAA+GGG | + | chr8.4:18908008-18908027 | MS.gene58460:CDS | 40.0% | |
| CCCCACTCAGAACAAATTAA+TGG | - | chr8.4:18906655-18906674 | None:intergenic | 40.0% | |
| CTCTAATTTCAGTTTGGGCA+AGG | - | chr8.4:18905214-18905233 | None:intergenic | 40.0% | |
| CTGCGTTTGCAATATGTTTG+TGG | + | chr8.4:18907005-18907024 | MS.gene58460:CDS | 40.0% | |
| GAAATGCAATCTTCAAGCTG+AGG | + | chr8.4:18906331-18906350 | MS.gene58460:intron | 40.0% | |
| GACCAACTAAGGACTGAATT+TGG | - | chr8.4:18907035-18907054 | None:intergenic | 40.0% | |
| GATTAAGAACACACACGGTT+AGG | - | chr8.4:18906451-18906470 | None:intergenic | 40.0% | |
| GCCATATAACTTGGTATCGT+CGG | - | chr8.4:18907836-18907855 | None:intergenic | 40.0% | |
| GCTAGGTCAAAATTTGCAGT+AGG | - | chr8.4:18907200-18907219 | None:intergenic | 40.0% | |
| GGTTACAAGCACTTATTCGT+GGG | + | chr8.4:18904713-18904732 | MS.gene58460:CDS | 40.0% | |
| GTCAAGCCAATTGCTATATC+TGG | + | chr8.4:18905769-18905788 | MS.gene58460:CDS | 40.0% | |
| GTGAGAAAAACAACAGTGCT+CGG | + | chr8.4:18907921-18907940 | MS.gene58460:CDS | 40.0% | |
| GTGTCAATTTCTTGATCTCC+AGG | - | chr8.4:18903794-18903813 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr8.4:18904956-18904975 | MS.gene58460:intron | 40.0% | |
| TAAACCAGTTTCCGAAACCT+TGG | - | chr8.4:18903690-18903709 | None:intergenic | 40.0% | |
| TATTCACAGGAAGGCTAACT+GGG | + | chr8.4:18906536-18906555 | MS.gene58460:intron | 40.0% | |
| TCACCAAAAGTCGTACAAGA+TGG | + | chr8.4:18907896-18907915 | MS.gene58460:CDS | 40.0% | |
| TCAGTTGCTGCCATATAACT+TGG | - | chr8.4:18907845-18907864 | None:intergenic | 40.0% | |
| TCCAAAGCCTCATTTGGAAA+AGG | + | chr8.4:18907403-18907422 | MS.gene58460:CDS | 40.0% | |
| TCCGACGATACCAAGTTATA+TGG | + | chr8.4:18907832-18907851 | MS.gene58460:CDS | 40.0% | |
| TCGATGAAAGAATTGGCAAG+TGG | + | chr8.4:18904542-18904561 | MS.gene58460:intron | 40.0% | |
| TGACACTCCAAACAGTTATC+AGG | + | chr8.4:18907568-18907587 | MS.gene58460:CDS | 40.0% | |
| TGAGATTCCAAAGCCTCATT+TGG | + | chr8.4:18907397-18907416 | MS.gene58460:CDS | 40.0% | |
| TGGGTAAATCACCAGGAAAA+TGG | + | chr8.4:18903086-18903105 | MS.gene58460:CDS | 40.0% | |
| TGTTGGAGATCAATACCTCT+TGG | + | chr8.4:18904407-18904426 | MS.gene58460:intron | 40.0% | |
| TTCATCTTCTCTGGATCAAG+TGG | - | chr8.4:18903842-18903861 | None:intergenic | 40.0% | |
| TTCTCGAAAGAAACTCAGTC+TGG | - | chr8.4:18905903-18905922 | None:intergenic | 40.0% | |
| ! | AGTTGTTGCTTCCAAGGTTT+CGG | + | chr8.4:18903676-18903695 | MS.gene58460:CDS | 40.0% |
| ! | ATCTGTGGATTTTCCAGCAA+AGG | - | chr8.4:18907296-18907315 | None:intergenic | 40.0% |
| ! | ATGGTGGAGGGAGAAATTAT+AGG | + | chr8.4:18906171-18906190 | MS.gene58460:intron | 40.0% |
| ! | ATTTTCCAGCAAAGGATCTG+AGG | - | chr8.4:18907288-18907307 | None:intergenic | 40.0% |
| ! | CTTAGTATCCCGGATTTTCT+TGG | - | chr8.4:18907102-18907121 | None:intergenic | 40.0% |
| ! | CTTCCATCTTGTACGACTTT+TGG | - | chr8.4:18907902-18907921 | None:intergenic | 40.0% |
| ! | GACCCACCGTTTGAAATAAT+AGG | + | chr8.4:18906228-18906247 | MS.gene58460:intron | 40.0% |
| ! | GCAGTATCTTCTTCTAGAGA+TGG | + | chr8.4:18908049-18908068 | MS.gene58460:CDS | 40.0% |
| ! | GCTACTTTGTGCTGTATGTA+TGG | + | chr8.4:18904760-18904779 | MS.gene58460:CDS | 40.0% |
| ! | GGTTAAACGTAACTTGCGAA+AGG | + | chr8.4:18907328-18907347 | MS.gene58460:CDS | 40.0% |
| ! | GTGTTGGTGTTTCAGAACAA+GGG | + | chr8.4:18907441-18907460 | MS.gene58460:CDS | 40.0% |
| ! | TAGCTCCAGTTGAGGTTTTT+CGG | - | chr8.4:18907778-18907797 | None:intergenic | 40.0% |
| ! | TCCTTTTCCAAATGAGGCTT+TGG | - | chr8.4:18907407-18907426 | None:intergenic | 40.0% |
| ! | TGTTGGTGTTTCAGAACAAG+GGG | + | chr8.4:18907442-18907461 | MS.gene58460:CDS | 40.0% |
| ! | TTTTCCAGCAAAGGATCTGA+GGG | - | chr8.4:18907287-18907306 | None:intergenic | 40.0% |
| !! | AAAGGCACTTAGAGTTCCAT+CGG | - | chr8.4:18903944-18903963 | None:intergenic | 40.0% |
| !! | AGTGTTGGTGTTTCAGAACA+AGG | + | chr8.4:18907440-18907459 | MS.gene58460:CDS | 40.0% |
| !! | GATATAGCAATTGGCTTGAC+AGG | - | chr8.4:18905769-18905788 | None:intergenic | 40.0% |
| !! | TAGATCTGATGATGCCGTTT+TGG | - | chr8.4:18903340-18903359 | None:intergenic | 40.0% |
| !! | TTAAGGCTCTAAATGCTCTC+CGG | - | chr8.4:18904681-18904700 | None:intergenic | 40.0% |
| !! | TTCTGAAACACCAACACTTG+AGG | - | chr8.4:18907438-18907457 | None:intergenic | 40.0% |
| !!! | ATTTTCTTGGGTTGGGGAAT+TGG | - | chr8.4:18907089-18907108 | None:intergenic | 40.0% |
| AAGGCAAAATTGAGGGCTCA+AGG | + | chr8.4:18907872-18907891 | MS.gene58460:CDS | 45.0% | |
| ACACAGAGACCAGTTCATTC+AGG | + | chr8.4:18907998-18908017 | MS.gene58460:CDS | 45.0% | |
| ACCTTCTCAAGCTCAATCTG+TGG | - | chr8.4:18907311-18907330 | None:intergenic | 45.0% | |
| AGCAAACACTTTCACCCGTA+AGG | + | chr8.4:18905810-18905829 | MS.gene58460:CDS | 45.0% | |
| AGTGGTGCATCTTGATCAAC+AGG | - | chr8.4:18903824-18903843 | None:intergenic | 45.0% | |
| CAACACTATTGCCGTACATG+TGG | + | chr8.4:18903727-18903746 | MS.gene58460:CDS | 45.0% | |
| CACATGTACGGCAATAGTGT+TGG | - | chr8.4:18903729-18903748 | None:intergenic | 45.0% | |
| CCAGTTCATTCAGGTGGTAA+AGG | + | chr8.4:18908007-18908026 | MS.gene58460:CDS | 45.0% | |
| CCTTTACCACCTGAATGAAC+TGG | - | chr8.4:18908010-18908029 | None:intergenic | 45.0% | |
| CTAGGAGTAATTCCCATCTC+TGG | - | chr8.4:18907518-18907537 | None:intergenic | 45.0% | |
| CTATTCACAGGAAGGCTAAC+TGG | + | chr8.4:18906535-18906554 | MS.gene58460:intron | 45.0% | |
| CTTCTTTATTCTCCAGCTCC+AGG | - | chr8.4:18903757-18903776 | None:intergenic | 45.0% | |
| GAAACAGTTGCCTCAAGTGT+TGG | + | chr8.4:18907425-18907444 | MS.gene58460:CDS | 45.0% | |
| GAACTGCAGCTTCAACAACT+GGG | - | chr8.4:18907361-18907380 | None:intergenic | 45.0% | |
| GATCATAATTCTTGCTGGGC+TGG | + | chr8.4:18905291-18905310 | MS.gene58460:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr8.4:18905027-18905046 | MS.gene58460:intron | 45.0% | |
| GCTGTTAGTTGAAGATGGCA+GGG | - | chr8.4:18907954-18907973 | None:intergenic | 45.0% | |
| GTCAGTGATAAGAAAGGGAG+GGG | + | chr8.4:18905662-18905681 | MS.gene58460:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr8.4:18904962-18904981 | MS.gene58460:intron | 45.0% | |
| GTGCAATCTATTGAAGCTCC+AGG | + | chr8.4:18904858-18904877 | MS.gene58460:CDS | 45.0% | |
| GTTCATTCAGGTGGTAAAGG+GGG | + | chr8.4:18908010-18908029 | MS.gene58460:CDS | 45.0% | |
| TATTTGTCGAGGGGTAACCT+TGG | + | chr8.4:18904920-18904939 | MS.gene58460:intron | 45.0% | |
| TCAGTTTGGGCAAGGAAATC+AGG | - | chr8.4:18905206-18905225 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr8.4:18904963-18904982 | MS.gene58460:intron | 45.0% | |
| TCCACAGATTGAGCTTGAGA+AGG | + | chr8.4:18907307-18907326 | MS.gene58460:CDS | 45.0% | |
| TGATCCAGAGAAGATGAAGC+TGG | + | chr8.4:18903844-18903863 | MS.gene58460:CDS | 45.0% | |
| TGCTGTTAGTTGAAGATGGC+AGG | - | chr8.4:18907955-18907974 | None:intergenic | 45.0% | |
| TTAACCAGTGAGCCAGAGAT+GGG | + | chr8.4:18907503-18907522 | MS.gene58460:CDS | 45.0% | |
| TTCCCCAACCCAAGAAAATC+CGG | + | chr8.4:18907090-18907109 | MS.gene58460:CDS | 45.0% | |
| ! | AAAAGCACAGGCTGCTTTCA+GGG | + | chr8.4:18903880-18903899 | MS.gene58460:CDS | 45.0% |
| ! | ACATTGCTTGATAGCTGCTC+TGG | - | chr8.4:18904314-18904333 | None:intergenic | 45.0% |
| ! | AGCTCCAGTTGAGGTTTTTC+GGG | - | chr8.4:18907777-18907796 | None:intergenic | 45.0% |
| ! | ATCCCGGATTTTCTTGGGTT+GGG | - | chr8.4:18907096-18907115 | None:intergenic | 45.0% |
| ! | ATGTACGGCAATAGTGTTGG+AGG | - | chr8.4:18903726-18903745 | None:intergenic | 45.0% |
| ! | ATTTCAGGGTTTGCTTGTGC+TGG | - | chr8.4:18907224-18907243 | None:intergenic | 45.0% |
| ! | CTTCTGATTAGTCCATGGGT+GGG | + | chr8.4:18905150-18905169 | MS.gene58460:intron | 45.0% |
| ! | GTGCAAATAAAGGTGCAAGC+TGG | + | chr8.4:18905344-18905363 | MS.gene58460:intron | 45.0% |
| ! | TATCCCGGATTTTCTTGGGT+TGG | - | chr8.4:18907097-18907116 | None:intergenic | 45.0% |
| ! | TCTTCTGATTAGTCCATGGG+TGG | + | chr8.4:18905149-18905168 | MS.gene58460:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8.4:18904996-18905015 | None:intergenic | 45.0% |
| ! | TTCTGATTAGTCCATGGGTG+GGG | + | chr8.4:18905151-18905170 | MS.gene58460:intron | 45.0% |
| ! | TTGAGCCCTCAATTTTGCCT+TGG | - | chr8.4:18907873-18907892 | None:intergenic | 45.0% |
| ! | TTTCAGGGTTTGCTTGTGCT+GGG | - | chr8.4:18907223-18907242 | None:intergenic | 45.0% |
| !! | AGCAATTGGCTTGACAGGTT+TGG | - | chr8.4:18905764-18905783 | None:intergenic | 45.0% |
| !! | CAAGCTGGTGCTTTAAAGCT+TGG | + | chr8.4:18905359-18905378 | MS.gene58460:intron | 45.0% |
| !! | TAAGGCTCTAAATGCTCTCC+GGG | - | chr8.4:18904680-18904699 | None:intergenic | 45.0% |
| !!! | AGGTTTTTCGGGTTGGTTTC+TGG | - | chr8.4:18907766-18907785 | None:intergenic | 45.0% |
| !! | AATTATAATAAAAAAAAAAG+GGG | - | chr8.4:18905106-18905125 | None:intergenic | 5.0% |
| AACCTCAACTGGAGCTAAGC+AGG | + | chr8.4:18907781-18907800 | MS.gene58460:CDS | 50.0% | |
| AAGCAGGAACGTGCAGAGAA+TGG | + | chr8.4:18907797-18907816 | MS.gene58460:CDS | 50.0% | |
| AGCACTTATTCGTGGGCACT+TGG | + | chr8.4:18904720-18904739 | MS.gene58460:CDS | 50.0% | |
| AGTGATAAGAAAGGGAGGGG+AGG | + | chr8.4:18905665-18905684 | MS.gene58460:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr8.4:18904940-18904959 | None:intergenic | 50.0% | |
| CAGAGACCAGTTCATTCAGG+TGG | + | chr8.4:18908001-18908020 | MS.gene58460:CDS | 50.0% | |
| CCAACCCGAAAAACCTCAAC+TGG | + | chr8.4:18907770-18907789 | MS.gene58460:CDS | 50.0% | |
| CCAAGTCTAAACGTACCCAC+AGG | + | chr8.4:18907168-18907187 | MS.gene58460:CDS | 50.0% | |
| CCTGTGGGTACGTTTAGACT+TGG | - | chr8.4:18907171-18907190 | None:intergenic | 50.0% | |
| CTCCAGGTCTTCCACATGTA+CGG | - | chr8.4:18903741-18903760 | None:intergenic | 50.0% | |
| GCTTCCAAGGTTTCGGAAAC+TGG | + | chr8.4:18903683-18903702 | MS.gene58460:CDS | 50.0% | |
| GGAACTGCAGCTTCAACAAC+TGG | - | chr8.4:18907362-18907381 | None:intergenic | 50.0% | |
| GTGCAATGCACAAGCTGTTG+CGG | + | chr8.4:18905486-18905505 | MS.gene58460:intron | 50.0% | |
| GTTAACCAGTGAGCCAGAGA+TGG | + | chr8.4:18907502-18907521 | MS.gene58460:CDS | 50.0% | |
| TCCAGAGAAGATGAAGCTGG+AGG | + | chr8.4:18903847-18903866 | MS.gene58460:CDS | 50.0% | |
| TCCCCAACCCAAGAAAATCC+GGG | + | chr8.4:18907091-18907110 | MS.gene58460:CDS | 50.0% | |
| TCCTCCAGCTTCATCTTCTC+TGG | - | chr8.4:18903851-18903870 | None:intergenic | 50.0% | |
| TGCAGTAGGAAGCTTCCTGT+GGG | - | chr8.4:18907186-18907205 | None:intergenic | 50.0% | |
| TTCCTGCTTAGCTCCAGTTG+AGG | - | chr8.4:18907786-18907805 | None:intergenic | 50.0% | |
| TTGACAGGTTTGGCATCCTG+AGG | - | chr8.4:18905754-18905773 | None:intergenic | 50.0% | |
| TTGCAGTAGGAAGCTTCCTG+TGG | - | chr8.4:18907187-18907206 | None:intergenic | 50.0% | |
| ! | AAAGCACAGGCTGCTTTCAG+GGG | + | chr8.4:18903881-18903900 | MS.gene58460:CDS | 50.0% |
| ! | AATTCCCATCTCTGGCTCAC+TGG | - | chr8.4:18907510-18907529 | None:intergenic | 50.0% |
| ! | ACGGCAATAGTGTTGGAGGA+TGG | - | chr8.4:18903722-18903741 | None:intergenic | 50.0% |
| ! | CAAAAGCACAGGCTGCTTTC+AGG | + | chr8.4:18903879-18903898 | MS.gene58460:CDS | 50.0% |
| ! | GGAAGCAGCTACAAAAGCAC+AGG | + | chr8.4:18903868-18903887 | MS.gene58460:CDS | 50.0% |
| ! | GGAAGGAGTTGTTGCTTCCA+AGG | + | chr8.4:18903670-18903689 | MS.gene58460:CDS | 50.0% |
| ! | GGCTGCTTTCAGGGGTTATT+TGG | + | chr8.4:18903889-18903908 | MS.gene58460:CDS | 50.0% |
| ! | TGAACTGGTCTCTGTGTCCT+AGG | - | chr8.4:18907995-18908014 | None:intergenic | 50.0% |
| ! | TTCAGGGTTTGCTTGTGCTG+GGG | - | chr8.4:18907222-18907241 | None:intergenic | 50.0% |
| !! | AAAGGATCTGAGGGTTGGCT+AGG | - | chr8.4:18907278-18907297 | None:intergenic | 50.0% |
| !! | TCCCGGATTTTCTTGGGTTG+GGG | - | chr8.4:18907095-18907114 | None:intergenic | 50.0% |
| !!! | CCAGTTGAGGTTTTTCGGGT+TGG | - | chr8.4:18907773-18907792 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8.4:18904975-18904994 | MS.gene58460:intron | 55.0% | |
| ACATGTGGAAGACCTGGAGC+TGG | + | chr8.4:18903742-18903761 | MS.gene58460:CDS | 55.0% | |
| ACCAGCGCTCAGACCAACTA+AGG | - | chr8.4:18907046-18907065 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr8.4:18905071-18905090 | None:intergenic | 55.0% | |
| CAAATGGTGAGACCGCTTCC+CGG | + | chr8.4:18905043-18905062 | MS.gene58460:intron | 55.0% | |
| CCAACCCTCAGATCCTTTGC+TGG | + | chr8.4:18907280-18907299 | MS.gene58460:CDS | 55.0% | |
| CCAGCAAAGGATCTGAGGGT+TGG | - | chr8.4:18907283-18907302 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr8.4:18905070-18905089 | None:intergenic | 55.0% | |
| GGCAGCAACTGAATCTGCCA+AGG | + | chr8.4:18907853-18907872 | MS.gene58460:CDS | 55.0% | |
| TCATATGCCAACCCCACCCA+TGG | - | chr8.4:18905165-18905184 | None:intergenic | 55.0% | |
| TGCCGTACATGTGGAAGACC+TGG | + | chr8.4:18903736-18903755 | MS.gene58460:CDS | 55.0% | |
| ! | GATTAGTCCATGGGTGGGGT+TGG | + | chr8.4:18905155-18905174 | MS.gene58460:intron | 55.0% |
| ! | TCCTTAGTTGGTCTGAGCGC+TGG | + | chr8.4:18907042-18907061 | MS.gene58460:CDS | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr8.4:18904929-18904948 | MS.gene58460:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+CGG | - | chr8.4:18905058-18905077 | None:intergenic | 60.0% | |
| CGGGAAGCGGTCTCACCATT+TGG | - | chr8.4:18905045-18905064 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8.4:18905058-18905077 | MS.gene58460:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8.4:18905059-18905078 | MS.gene58460:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr8.4:18905075-18905094 | MS.gene58460:intron | 60.0% |
| ! | GGTTTGCTTGTGCTGGGGCT+AGG | - | chr8.4:18907217-18907236 | None:intergenic | 60.0% |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8.4:18905064-18905083 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8.4:18905065-18905084 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr8.4:18905076-18905095 | MS.gene58460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18903071 | 18908076 | 18903071 | ID=MS.gene58460 |
| chr8.4 | mRNA | 18903071 | 18908076 | 18903071 | ID=MS.gene58460.t1;Parent=MS.gene58460 |
| chr8.4 | exon | 18903071 | 18903168 | 18903071 | ID=MS.gene58460.t1.exon1;Parent=MS.gene58460.t1 |
| chr8.4 | CDS | 18903071 | 18903168 | 18903071 | ID=cds.MS.gene58460.t1;Parent=MS.gene58460.t1 |
| chr8.4 | exon | 18903653 | 18903910 | 18903653 | ID=MS.gene58460.t1.exon2;Parent=MS.gene58460.t1 |
| chr8.4 | CDS | 18903653 | 18903910 | 18903653 | ID=cds.MS.gene58460.t1;Parent=MS.gene58460.t1 |
| chr8.4 | exon | 18904676 | 18904879 | 18904676 | ID=MS.gene58460.t1.exon3;Parent=MS.gene58460.t1 |
| chr8.4 | CDS | 18904676 | 18904879 | 18904676 | ID=cds.MS.gene58460.t1;Parent=MS.gene58460.t1 |
| chr8.4 | exon | 18905757 | 18905831 | 18905757 | ID=MS.gene58460.t1.exon4;Parent=MS.gene58460.t1 |
| chr8.4 | CDS | 18905757 | 18905831 | 18905757 | ID=cds.MS.gene58460.t1;Parent=MS.gene58460.t1 |
| chr8.4 | exon | 18906975 | 18908076 | 18906975 | ID=MS.gene58460.t1.exon5;Parent=MS.gene58460.t1 |
| chr8.4 | CDS | 18906975 | 18908076 | 18906975 | ID=cds.MS.gene58460.t1;Parent=MS.gene58460.t1 |
| Gene Sequence |
| Protein sequence |
