AlfalfaGEDB | MS.gene054552

M. sativa cultivar XinJiangDaYe / MS.gene054552

KEGG: K07760
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005524 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054552.t1	CAA65980.1	95.9	97	4	0	62	158	76	172	9.80E-47	196.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054552.t1	Q8L4P8	81.6	87	16	0	72	158	78	164	4.9e-39	162.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054552.t1	P93321	95.9	97	4	0	62	158	76	172	7.1e-47	196.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049989	MS.gene054552	0.806129	9.55E-50	-1.69E-46
MS.gene051914	MS.gene054552	0.80887	2.50E-50	-1.69E-46
MS.gene051955	MS.gene054552	0.824256	8.91E-54	-1.69E-46
MS.gene052308	MS.gene054552	0.823238	1.54E-53	-1.69E-46
MS.gene052367	MS.gene054552	0.810818	9.54E-51	-1.69E-46
MS.gene053173	MS.gene054552	0.874124	8.63E-68	-1.69E-46
MS.gene053348	MS.gene054552	0.837202	5.97E-57	-1.69E-46
MS.gene053416	MS.gene054552	0.816463	5.46E-52	-1.69E-46
MS.gene053417	MS.gene054552	0.814079	1.85E-51	-1.69E-46
MS.gene054551	MS.gene054552	0.885136	1.05E-71	-1.69E-46
MS.gene054552	MS.gene054593	0.896948	2.26E-76	-1.69E-46
MS.gene054552	MS.gene054633	0.800548	1.37E-48	-1.69E-46
MS.gene054552	MS.gene055308	0.825612	4.26E-54	-1.69E-46
MS.gene054552	MS.gene055578	0.824031	1.01E-53	-1.69E-46
MS.gene054552	MS.gene055957	0.800182	1.62E-48	-1.69E-46
MS.gene054552	MS.gene056041	0.868849	4.81E-66	-1.69E-46
MS.gene054552	MS.gene05640	0.833269	5.88E-56	-1.69E-46
MS.gene054552	MS.gene056526	0.803454	3.46E-49	-1.69E-46
MS.gene054552	MS.gene057358	0.805265	1.45E-49	-1.69E-46
MS.gene054552	MS.gene057458	0.807678	4.49E-50	-1.69E-46
MS.gene054552	MS.gene058128	0.809022	2.32E-50	-1.69E-46
MS.gene054552	MS.gene058853	0.821326	4.28E-53	-1.69E-46
MS.gene054552	MS.gene059553	0.807772	4.29E-50	-1.69E-46
MS.gene054552	MS.gene060473	0.833829	4.26E-56	-1.69E-46
MS.gene054552	MS.gene060565	0.81959	1.07E-52	-1.69E-46
MS.gene054552	MS.gene06093	0.8318	1.36E-55	-1.69E-46
MS.gene054552	MS.gene061099	0.818084	2.36E-52	-1.69E-46
MS.gene054552	MS.gene061260	0.833487	5.19E-56	-1.69E-46
MS.gene054552	MS.gene061275	0.825419	4.74E-54	-1.69E-46
MS.gene054552	MS.gene061303	0.841642	4.20E-58	-1.69E-46
MS.gene054552	MS.gene063035	0.806451	8.17E-50	-1.69E-46
MS.gene054552	MS.gene063095	0.813841	2.09E-51	-1.69E-46
MS.gene054552	MS.gene064834	0.821779	3.37E-53	-1.69E-46
MS.gene054552	MS.gene066026	0.833692	4.61E-56	-1.69E-46
MS.gene054552	MS.gene067030	0.818118	2.32E-52	-1.69E-46
MS.gene054552	MS.gene067144	0.812301	4.54E-51	-1.69E-46
MS.gene054552	MS.gene068197	0.820555	6.45E-53	-1.69E-46
MS.gene054552	MS.gene07048	0.80837	3.20E-50	-1.69E-46
MS.gene054552	MS.gene07051	0.814989	1.16E-51	-1.69E-46
MS.gene054552	MS.gene070800	0.83111	2.01E-55	-1.69E-46
MS.gene054552	MS.gene072702	0.812352	4.43E-51	-1.69E-46
MS.gene054552	MS.gene072952	0.828467	8.85E-55	-1.69E-46
MS.gene054552	MS.gene072954	0.806457	8.15E-50	-1.69E-46
MS.gene054552	MS.gene072956	0.801487	8.80E-49	-1.69E-46
MS.gene054552	MS.gene072963	0.805903	1.07E-49	-1.69E-46
MS.gene054552	MS.gene073698	0.826806	2.22E-54	-1.69E-46
MS.gene054552	MS.gene073862	0.815329	9.78E-52	-1.69E-46
MS.gene054552	MS.gene07425	0.816153	6.41E-52	-1.69E-46
MS.gene054552	MS.gene07616	0.813237	2.83E-51	-1.69E-46
MS.gene054552	MS.gene08836	0.825548	4.41E-54	-1.69E-46
MS.gene054552	MS.gene08848	0.822494	2.30E-53	-1.69E-46
MS.gene054552	MS.gene08988	0.815593	8.54E-52	-1.69E-46
MS.gene054552	MS.gene09124	0.830594	2.69E-55	-1.69E-46
MS.gene054552	MS.gene09178	0.802657	5.06E-49	-1.69E-46
MS.gene054552	MS.gene09245	0.813482	2.50E-51	-1.69E-46
MS.gene054552	MS.gene09258	0.815067	1.12E-51	-1.69E-46
MS.gene054552	MS.gene09540	0.819	1.46E-52	-1.69E-46
MS.gene054552	MS.gene09543	0.819512	1.12E-52	-1.69E-46
MS.gene054552	MS.gene09594	0.820946	5.24E-53	-1.69E-46
MS.gene054552	MS.gene09806	0.819702	1.01E-52	-1.69E-46
MS.gene054552	MS.gene20224	0.845349	4.29E-59	-1.69E-46
MS.gene054552	MS.gene21320	0.821736	3.45E-53	-1.69E-46
MS.gene054552	MS.gene21734	0.820706	5.95E-53	-1.69E-46
MS.gene054552	MS.gene21888	0.824799	6.64E-54	-1.69E-46
MS.gene054552	MS.gene22383	0.80161	8.30E-49	-1.69E-46
MS.gene054552	MS.gene22466	0.807785	4.27E-50	-1.69E-46
MS.gene054552	MS.gene22500	0.826646	2.42E-54	-1.69E-46
MS.gene054552	MS.gene23050	0.801685	8.01E-49	-1.69E-46
MS.gene054552	MS.gene23323	0.801522	8.65E-49	-1.69E-46
MS.gene054552	MS.gene23886	0.846426	2.19E-59	-1.69E-46
MS.gene054552	MS.gene24735	0.827292	1.70E-54	-1.69E-46
MS.gene054552	MS.gene25797	0.856402	3.30E-62	-1.69E-46
MS.gene054552	MS.gene26406	0.807346	5.29E-50	-1.69E-46
MS.gene054552	MS.gene26619	0.812633	3.84E-51	-1.69E-46
MS.gene054552	MS.gene26706	0.810326	1.22E-50	-1.69E-46
MS.gene054552	MS.gene27811	0.815461	9.14E-52	-1.69E-46
MS.gene054552	MS.gene27812	0.828022	1.13E-54	-1.69E-46
MS.gene054552	MS.gene27817	0.818241	2.17E-52	-1.69E-46
MS.gene054552	MS.gene27941	0.801149	1.03E-48	-1.69E-46
MS.gene054552	MS.gene28452	0.836081	1.15E-56	-1.69E-46
MS.gene054552	MS.gene28807	0.824192	9.22E-54	-1.69E-46
MS.gene054552	MS.gene28867	0.843027	1.80E-58	-1.69E-46
MS.gene054552	MS.gene28923	0.832017	1.20E-55	-1.69E-46
MS.gene054552	MS.gene31917	0.828563	8.38E-55	-1.69E-46
MS.gene054552	MS.gene31973	0.8312	1.91E-55	-1.69E-46
MS.gene054552	MS.gene32306	0.813246	2.82E-51	-1.69E-46
MS.gene054552	MS.gene32467	0.807119	5.91E-50	-1.69E-46
MS.gene054552	MS.gene32468	0.806635	7.48E-50	-1.69E-46
MS.gene054552	MS.gene33809	0.837658	4.57E-57	-1.69E-46
MS.gene054552	MS.gene34503	0.806108	9.65E-50	-1.69E-46
MS.gene054552	MS.gene34573	0.813085	3.06E-51	-1.69E-46
MS.gene054552	MS.gene35150	0.84887	4.65E-60	-1.69E-46
MS.gene054552	MS.gene36032	0.805744	1.15E-49	-1.69E-46
MS.gene054552	MS.gene36485	0.830601	2.68E-55	-1.69E-46
MS.gene054552	MS.gene37495	0.877653	5.29E-69	-1.69E-46
MS.gene054552	MS.gene37925	0.825184	5.38E-54	-1.69E-46
MS.gene054552	MS.gene39469	0.82257	2.21E-53	-1.69E-46
MS.gene054552	MS.gene39538	0.826914	2.09E-54	-1.69E-46
MS.gene054552	MS.gene40143	0.818562	1.84E-52	-1.69E-46
MS.gene054552	MS.gene40241	0.831094	2.03E-55	-1.69E-46
MS.gene054552	MS.gene40329	0.847941	8.41E-60	-1.69E-46
MS.gene054552	MS.gene40405	0.857997	1.11E-62	-1.69E-46
MS.gene054552	MS.gene40689	0.809106	2.23E-50	-1.69E-46
MS.gene054552	MS.gene42543	0.80263	5.12E-49	-1.69E-46
MS.gene054552	MS.gene44052	0.816969	4.20E-52	-1.69E-46
MS.gene054552	MS.gene44100	0.864163	1.48E-64	-1.69E-46
MS.gene054552	MS.gene44103	0.81246	4.19E-51	-1.69E-46
MS.gene054552	MS.gene44251	0.808843	2.54E-50	-1.69E-46
MS.gene054552	MS.gene47007	0.833832	4.25E-56	-1.69E-46
MS.gene054552	MS.gene48067	0.849513	3.08E-60	-1.69E-46
MS.gene054552	MS.gene48492	0.802656	5.06E-49	-1.69E-46
MS.gene054552	MS.gene49312	0.842008	3.36E-58	-1.69E-46
MS.gene054552	MS.gene49961	0.837758	4.30E-57	-1.69E-46
MS.gene054552	MS.gene50484	0.859237	4.75E-63	-1.69E-46
MS.gene054552	MS.gene50613	0.80875	2.66E-50	-1.69E-46
MS.gene054552	MS.gene50736	0.831294	1.81E-55	-1.69E-46
MS.gene054552	MS.gene51554	0.808124	3.61E-50	-1.69E-46
MS.gene054552	MS.gene52403	0.822041	2.93E-53	-1.69E-46
MS.gene054552	MS.gene52607	0.803825	2.90E-49	-1.69E-46
MS.gene054552	MS.gene52624	0.84966	2.80E-60	-1.69E-46
MS.gene054552	MS.gene52703	0.800203	1.61E-48	-1.69E-46
MS.gene054552	MS.gene52980	0.841427	4.78E-58	-1.69E-46
MS.gene054552	MS.gene53408	0.82404	1.00E-53	-1.69E-46
MS.gene054552	MS.gene53887	0.822817	1.93E-53	-1.69E-46
MS.gene054552	MS.gene55817	0.832313	1.02E-55	-1.69E-46
MS.gene054552	MS.gene56789	0.800106	1.68E-48	-1.69E-46
MS.gene054552	MS.gene57751	0.844084	9.41E-59	-1.69E-46
MS.gene054552	MS.gene57752	0.844404	7.72E-59	-1.69E-46
MS.gene054552	MS.gene58114	0.835608	1.52E-56	-1.69E-46
MS.gene054552	MS.gene58132	0.807515	4.87E-50	-1.69E-46
MS.gene054552	MS.gene58234	0.844808	6.01E-59	-1.69E-46
MS.gene054552	MS.gene58285	0.829407	5.24E-55	-1.69E-46
MS.gene054552	MS.gene58459	0.815751	7.88E-52	-1.69E-46
MS.gene054552	MS.gene58460	0.818061	2.39E-52	-1.69E-46
MS.gene054552	MS.gene58461	0.800887	1.17E-48	-1.69E-46
MS.gene054552	MS.gene58754	0.820937	5.27E-53	-1.69E-46
MS.gene054552	MS.gene58835	0.832443	9.42E-56	-1.69E-46
MS.gene054552	MS.gene59357	0.805187	1.51E-49	-1.69E-46
MS.gene054552	MS.gene61081	0.802046	6.76E-49	-1.69E-46
MS.gene054552	MS.gene61094	0.816653	4.95E-52	-1.69E-46
MS.gene054552	MS.gene61618	0.836584	8.59E-57	-1.69E-46
MS.gene054552	MS.gene61684	0.806272	8.92E-50	-1.69E-46
MS.gene054552	MS.gene61977	0.845765	3.31E-59	-1.69E-46
MS.gene054552	MS.gene63469	0.82891	6.91E-55	-1.69E-46
MS.gene054552	MS.gene64538	0.80175	7.77E-49	-1.69E-46
MS.gene054552	MS.gene65301	0.845122	4.94E-59	-1.69E-46
MS.gene054552	MS.gene65431	0.868771	5.10E-66	-1.69E-46
MS.gene054552	MS.gene66429	0.817549	3.11E-52	-1.69E-46
MS.gene054552	MS.gene66615	0.816581	5.14E-52	-1.69E-46
MS.gene054552	MS.gene67555	0.835633	1.50E-56	-1.69E-46
MS.gene054552	MS.gene67669	0.804535	2.06E-49	-1.69E-46
MS.gene054552	MS.gene68361	0.811129	8.17E-51	-1.69E-46
MS.gene054552	MS.gene69328	0.821921	3.12E-53	-1.69E-46
MS.gene054552	MS.gene69721	0.806491	8.02E-50	-1.69E-46
MS.gene054552	MS.gene69722	0.825406	4.77E-54	-1.69E-46
MS.gene054552	MS.gene70263	0.830079	3.59E-55	-1.69E-46
MS.gene054552	MS.gene70403	0.853412	2.43E-61	-1.69E-46
MS.gene054552	MS.gene70494	0.801893	7.26E-49	-1.69E-46
MS.gene054552	MS.gene71431	0.852165	5.52E-61	-1.69E-46
MS.gene054552	MS.gene73897	0.801852	7.40E-49	-1.69E-46
MS.gene054552	MS.gene75318	0.848212	7.08E-60	-1.69E-46
MS.gene054552	MS.gene75320	0.815188	1.05E-51	-1.69E-46
MS.gene054552	MS.gene75579	0.818798	1.62E-52	-1.69E-46
MS.gene054552	MS.gene75642	0.835206	1.92E-56	-1.69E-46
MS.gene054552	MS.gene77563	0.839472	1.55E-57	-1.69E-46
MS.gene054552	MS.gene78529	0.824475	7.91E-54	-1.69E-46
MS.gene054552	MS.gene78924	0.804962	1.68E-49	-1.69E-46
MS.gene054552	MS.gene78972	0.822185	2.71E-53	-1.69E-46
MS.gene054552	MS.gene79251	0.848714	5.14E-60	-1.69E-46
MS.gene054552	MS.gene79921	0.848033	7.93E-60	-1.69E-46
MS.gene054552	MS.gene81904	0.814877	1.23E-51	-1.69E-46
MS.gene054552	MS.gene84014	0.821063	4.93E-53	-1.69E-46
MS.gene054552	MS.gene85599	0.825932	3.58E-54	-1.69E-46
MS.gene054552	MS.gene89653	0.84075	7.20E-58	-1.69E-46
MS.gene054552	MS.gene90302	0.833546	5.01E-56	-1.69E-46
MS.gene054552	MS.gene90876	0.802459	5.56E-49	-1.69E-46
MS.gene054552	MS.gene91412	0.825928	3.59E-54	-1.69E-46
MS.gene054552	MS.gene91551	0.848688	5.22E-60	-1.69E-46
MS.gene054552	MS.gene93102	0.80238	5.77E-49	-1.69E-46
MS.gene054552	MS.gene93854	0.823046	1.71E-53	-1.69E-46
MS.gene054552	MS.gene94954	0.811518	6.73E-51	-1.69E-46
MS.gene054552	MS.gene96390	0.827383	1.61E-54	-1.69E-46
MS.gene054552	MS.gene97701	0.818852	1.58E-52	-1.69E-46
MS.gene054552	MS.gene99337	0.843627	1.25E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054552.t1	MTR_4g007750	93.814	97	6	0	62	158	76	172	7.06e-62	193
MS.gene054552.t1	MTR_1g075610	62.500	88	31	1	71	158	92	177	1.57e-32	117
MS.gene054552.t1	MTR_4g094430	53.846	91	32	2	71	158	72	155	1.02e-24	97.1
MS.gene054552.t1	MTR_2g032060	57.471	87	27	3	75	158	76	155	1.61e-23	93.6
MS.gene054552.t1	MTR_8g461270	45.783	83	44	1	74	156	120	201	8.22e-17	76.3
MS.gene054552.t1	MTR_4g078290	46.988	83	36	3	75	156	203	278	2.21e-16	75.5
MS.gene054552.t1	MTR_4g078290	46.988	83	36	3	75	156	203	278	2.29e-16	75.5
MS.gene054552.t1	MTR_2g090405	46.988	83	36	3	75	156	215	290	1.35e-15	73.6
MS.gene054552.t1	MTR_3g098760	51.899	79	30	3	75	152	171	242	1.39e-15	73.2
MS.gene054552.t1	MTR_1g098300	42.169	83	42	3	75	157	200	276	1.52e-14	70.5
MS.gene054552.t1	MTR_5g008860	45.882	85	34	4	75	156	214	289	2.20e-14	69.7
MS.gene054552.t1	MTR_8g092290	42.353	85	43	3	75	159	215	293	5.82e-14	68.6
MS.gene054552.t1	MTR_3g112210	47.500	80	35	2	75	154	109	181	6.14e-14	68.2
MS.gene054552.t1	MTR_3g460950	45.238	84	39	2	75	158	109	185	7.03e-14	68.2
MS.gene054552.t1	MTR_3g060330	45.238	84	39	2	75	158	109	185	7.03e-14	68.2
MS.gene054552.t1	MTR_2g085200	45.882	85	34	3	75	156	208	283	7.19e-14	68.6
MS.gene054552.t1	MTR_8g099770	51.250	80	31	4	75	153	164	236	8.91e-14	68.2
MS.gene054552.t1	MTR_3g054080	43.902	82	40	2	75	156	88	163	9.09e-14	67.8
MS.gene054552.t1	MTR_4g061320	46.250	80	36	2	75	154	117	189	1.22e-13	67.4
MS.gene054552.t1	MTR_8g098845	46.250	80	36	2	75	154	129	201	1.28e-13	67.4
MS.gene054552.t1	MTR_6g013030	36.145	83	47	2	75	157	184	260	1.59e-13	67.4
MS.gene054552.t1	MTR_4g109090	40.000	80	40	3	75	153	179	251	2.24e-13	67.0
MS.gene054552.t1	MTR_6g080470	44.828	87	42	3	70	156	81	161	2.27e-13	66.6
MS.gene054552.t1	MTR_5g010030	46.250	80	36	2	75	154	118	190	2.55e-13	66.6
MS.gene054552.t1	MTR_3g096960	38.824	85	48	2	75	156	95	178	2.60e-13	66.6
MS.gene054552.t1	MTR_4g109090	40.000	80	40	3	75	153	31	103	2.85e-13	66.6
MS.gene054552.t1	MTR_8g086000	45.000	80	37	2	75	154	109	181	3.55e-13	66.2
MS.gene054552.t1	MTR_8g086000	44.048	84	40	2	75	158	152	228	3.56e-13	66.2
MS.gene054552.t1	MTR_8g012450	30.380	158	101	4	1	157	1	150	4.78e-13	65.9
MS.gene054552.t1	MTR_8g012450	30.380	158	101	4	1	157	1	150	5.88e-13	65.5
MS.gene054552.t1	MTR_2g020210	45.783	83	37	3	75	156	176	251	6.01e-13	65.9
MS.gene054552.t1	MTR_7g114300	42.353	85	37	3	75	156	181	256	6.37e-13	65.5
MS.gene054552.t1	MTR_7g114300	42.353	85	37	3	75	156	181	256	6.61e-13	65.5
MS.gene054552.t1	MTR_4g118780	43.373	83	39	3	75	156	178	253	6.85e-13	65.5
MS.gene054552.t1	MTR_4g123940	41.304	92	48	2	61	152	85	170	1.32e-12	64.7
MS.gene054552.t1	MTR_8g028720	43.750	80	38	2	75	154	114	186	1.47e-12	64.3
MS.gene054552.t1	MTR_4g123940	41.304	92	48	2	61	152	85	170	1.74e-12	63.9
MS.gene054552.t1	MTR_4g087620	43.210	81	39	2	75	155	132	205	2.11e-12	63.5
MS.gene054552.t1	MTR_1g103760	44.048	84	38	3	71	153	81	156	2.23e-12	63.9
MS.gene054552.t1	MTR_7g078690	43.750	80	38	2	75	154	115	187	2.27e-12	63.9
MS.gene054552.t1	MTR_4g087620	43.210	81	39	2	75	155	132	205	2.36e-12	63.9
MS.gene054552.t1	MTR_1g081870	46.988	83	36	3	75	156	196	271	2.46e-12	63.9
MS.gene054552.t1	MTR_5g026960	36.364	88	41	3	74	157	74	150	2.64e-12	63.9
MS.gene054552.t1	MTR_3g460980	40.476	84	42	2	75	158	96	171	2.70e-12	63.5
MS.gene054552.t1	MTR_3g060390	40.476	84	42	2	75	158	92	167	2.77e-12	63.5
MS.gene054552.t1	MTR_8g080190	39.024	82	44	2	75	156	459	534	3.22e-12	63.5
MS.gene054552.t1	MTR_5g075100	43.373	83	41	2	70	152	91	167	3.44e-12	63.5
MS.gene054552.t1	MTR_8g024590	39.130	92	50	2	61	152	76	161	4.15e-12	63.2
MS.gene054552.t1	MTR_8g080190	39.024	82	44	2	75	156	459	534	5.11e-12	63.2
MS.gene054552.t1	MTR_8g071230	38.095	84	45	2	74	157	74	150	5.55e-12	62.8
MS.gene054552.t1	MTR_3g040520	40.187	107	48	5	58	157	92	189	5.79e-12	62.8
MS.gene054552.t1	MTR_8g024600	39.130	92	50	2	61	152	76	161	6.11e-12	62.8
MS.gene054552.t1	MTR_3g085650	37.805	82	45	2	75	156	490	565	6.16e-12	62.8
MS.gene054552.t1	MTR_7g114300	42.353	85	37	3	75	156	181	256	6.23e-12	62.8
MS.gene054552.t1	MTR_3g085650	37.805	82	45	2	75	156	490	565	9.79e-12	62.4
MS.gene054552.t1	MTR_1g040875	44.444	72	39	1	81	152	99	169	9.98e-12	62.0
MS.gene054552.t1	MTR_3g085650	37.805	82	45	2	75	156	490	565	1.06e-11	62.0
MS.gene054552.t1	MTR_8g024600	41.463	82	42	2	71	152	3	78	1.34e-11	61.6
MS.gene054552.t1	MTR_7g114300	42.353	85	37	3	75	156	181	256	1.34e-11	62.0
MS.gene054552.t1	MTR_3g085650	37.805	82	45	2	75	156	490	565	1.41e-11	62.0
MS.gene054552.t1	MTR_3g040810	39.252	107	49	5	58	157	90	187	1.72e-11	61.6
MS.gene054552.t1	MTR_4g061130	43.750	80	38	3	75	154	116	188	1.95e-11	61.2
MS.gene054552.t1	MTR_3g076970	36.905	84	48	2	72	154	95	174	2.46e-11	60.8
MS.gene054552.t1	MTR_4g103810	37.037	81	45	2	76	156	185	259	3.03e-11	60.8
MS.gene054552.t1	MTR_8g103240	41.026	78	43	2	77	154	91	165	3.89e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054552.t1	AT2G38620	85.714	84	12	0	75	158	89	172	4.82e-47	154
MS.gene054552.t1	AT2G38620	85.714	84	12	0	75	158	89	172	4.82e-47	154
MS.gene054552.t1	AT2G38620	85.714	84	12	0	75	158	89	172	2.75e-46	153
MS.gene054552.t1	AT3G54180	76.842	95	19	1	67	158	76	170	5.56e-44	147
MS.gene054552.t1	AT2G38620	82.353	68	12	0	91	158	43	110	1.70e-34	121
MS.gene054552.t1	AT1G20930	62.921	89	29	2	71	158	90	175	9.06e-32	115
MS.gene054552.t1	AT1G76540	58.242	91	36	1	68	158	85	173	2.60e-31	114
MS.gene054552.t1	AT3G48750	51.648	91	34	2	71	158	72	155	2.66e-24	95.9
MS.gene054552.t1	AT1G03740	46.809	94	42	3	64	156	276	362	2.78e-16	75.5
MS.gene054552.t1	AT1G03740	46.809	94	42	3	64	156	276	362	3.31e-16	75.1
MS.gene054552.t1	AT5G50860	52.564	78	31	3	75	152	188	259	4.62e-15	72.0
MS.gene054552.t1	AT5G50860	51.899	79	32	3	75	153	188	260	6.60e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	7.24e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	7.41e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	8.65e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	8.65e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	8.65e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	8.65e-15	71.2
MS.gene054552.t1	AT5G44290	48.193	83	35	3	75	156	211	286	8.65e-15	71.2
MS.gene054552.t1	AT1G10210	48.148	81	35	2	75	155	109	182	2.16e-14	69.7
MS.gene054552.t1	AT1G10210	48.148	81	35	2	75	155	109	182	2.16e-14	69.7
MS.gene054552.t1	AT1G10210	48.148	81	35	2	75	155	109	182	2.16e-14	69.7
MS.gene054552.t1	AT1G66750	43.902	82	40	2	75	156	85	160	2.73e-14	69.3
MS.gene054552.t1	AT1G18040	43.678	87	43	2	70	156	79	159	3.87e-14	68.9
MS.gene054552.t1	AT4G10010	41.463	82	42	3	75	156	230	305	5.35e-14	68.9
MS.gene054552.t1	AT4G10010	41.463	82	42	3	75	156	50	125	6.57e-14	68.6
MS.gene054552.t1	AT1G59580	47.500	80	35	2	75	154	109	181	6.83e-14	68.2
MS.gene054552.t1	AT1G59580	47.500	80	35	2	75	154	109	181	6.83e-14	68.2
MS.gene054552.t1	AT1G53050	46.512	86	38	3	75	159	208	286	6.88e-14	68.6
MS.gene054552.t1	AT1G53050	46.512	86	38	3	75	159	208	286	6.88e-14	68.6
MS.gene054552.t1	AT1G71530	42.500	80	38	3	75	153	221	293	2.31e-13	67.0
MS.gene054552.t1	AT4G01370	45.000	80	37	2	75	154	120	192	2.43e-13	66.6
MS.gene054552.t1	AT1G71530	42.500	80	38	3	75	153	221	293	2.58e-13	66.6
MS.gene054552.t1	AT1G54610	45.882	85	34	3	75	156	192	267	2.76e-13	66.6
MS.gene054552.t1	AT1G54610	45.882	85	34	3	75	156	192	267	2.76e-13	66.6
MS.gene054552.t1	AT1G54610	45.882	85	34	3	75	156	192	267	2.76e-13	66.6
MS.gene054552.t1	AT1G71530	43.038	79	37	3	75	152	221	292	2.92e-13	66.2
MS.gene054552.t1	AT1G73690	42.529	87	44	2	70	156	78	158	3.36e-13	66.2
MS.gene054552.t1	AT4G11330	45.000	80	37	2	75	154	120	192	5.28e-13	65.9
MS.gene054552.t1	AT5G63610	41.176	85	46	2	75	156	100	183	6.38e-13	65.5
MS.gene054552.t1	AT4G36450	42.683	82	40	2	75	156	109	183	8.95e-13	65.1
MS.gene054552.t1	AT5G45430	30.323	155	99	4	1	154	1	147	1.08e-12	65.1
MS.gene054552.t1	AT1G07880	40.449	89	46	2	66	154	101	182	1.10e-12	63.9
MS.gene054552.t1	AT4G24400	43.373	83	41	3	70	152	77	153	1.15e-12	64.7
MS.gene054552.t1	AT1G74330	43.750	80	37	3	75	153	195	267	1.16e-12	65.1
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	75	147	1.17e-12	64.7
MS.gene054552.t1	AT4G24400	43.902	82	40	3	71	152	78	153	1.20e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	75	147	1.22e-12	64.7
MS.gene054552.t1	AT5G45430	30.323	155	99	4	1	154	1	147	1.22e-12	64.7
MS.gene054552.t1	AT2G18170	45.000	80	37	2	75	154	109	181	1.31e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	83	155	1.34e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	83	155	1.34e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	75	147	1.38e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	75	147	1.39e-12	64.7
MS.gene054552.t1	AT5G64960	41.860	86	38	4	75	157	61	137	1.41e-12	64.7
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	84	156	1.43e-12	64.7
MS.gene054552.t1	AT1G74330	43.750	80	37	3	75	153	195	267	1.45e-12	64.7
MS.gene054552.t1	AT1G74330	43.750	80	37	3	75	153	195	267	1.52e-12	64.7
MS.gene054552.t1	AT1G01560	45.000	80	37	2	75	154	117	189	1.69e-12	63.9
MS.gene054552.t1	AT1G01560	45.000	80	37	2	75	154	117	189	1.69e-12	63.9
MS.gene054552.t1	AT4G13020	41.250	80	40	2	75	154	84	156	1.81e-12	64.3
MS.gene054552.t1	AT4G19110	38.272	81	43	2	74	154	18	91	2.15e-12	63.9
MS.gene054552.t1	AT1G07880	40.449	89	46	2	66	154	101	182	2.22e-12	63.9
MS.gene054552.t1	AT1G01560	45.000	80	37	2	75	154	117	189	2.23e-12	63.9
MS.gene054552.t1	AT4G19110	38.272	81	43	2	74	154	74	147	2.42e-12	63.9
MS.gene054552.t1	AT4G19110	38.272	81	43	2	74	154	74	147	2.49e-12	63.9
MS.gene054552.t1	AT1G01560	45.000	80	37	2	75	154	117	189	2.51e-12	63.9
MS.gene054552.t1	AT2G43790	43.210	81	39	2	75	155	140	213	2.55e-12	63.9
MS.gene054552.t1	AT5G39420	38.095	84	44	3	75	157	179	255	2.63e-12	63.9
MS.gene054552.t1	AT1G01140	36.957	92	52	2	61	152	78	163	2.74e-12	63.9
MS.gene054552.t1	AT1G01140	36.957	92	52	2	61	152	78	163	2.87e-12	63.5
MS.gene054552.t1	AT1G01140	36.957	92	52	2	61	152	78	163	3.00e-12	63.5
MS.gene054552.t1	AT1G18670	40.000	80	40	3	75	153	205	277	4.43e-12	63.2
MS.gene054552.t1	AT1G18670	40.000	80	40	3	75	153	205	277	4.75e-12	63.2
MS.gene054552.t1	AT5G63370	35.366	82	47	2	75	156	242	317	4.94e-12	63.2
MS.gene054552.t1	AT1G18670	40.000	80	40	3	75	153	205	277	5.14e-12	63.2
MS.gene054552.t1	AT3G05050	42.169	83	40	3	75	156	212	287	5.17e-12	63.2
MS.gene054552.t1	AT3G05050	42.169	83	40	3	75	156	212	287	5.17e-12	63.2
MS.gene054552.t1	AT3G05050	42.169	83	40	3	75	156	212	287	5.17e-12	63.2
MS.gene054552.t1	AT2G25090	43.373	83	39	4	71	152	85	160	7.06e-12	62.8
MS.gene054552.t1	AT5G64960	41.860	86	38	4	75	157	114	190	1.27e-11	62.0
MS.gene054552.t1	AT1G30270	38.043	92	51	2	61	152	90	175	1.32e-11	62.0
MS.gene054552.t1	AT1G71530	40.964	83	41	3	75	156	221	296	1.41e-11	62.0
MS.gene054552.t1	AT5G45820	40.964	83	42	3	70	152	80	155	1.61e-11	61.6
MS.gene054552.t1	AT1G30270	41.463	82	42	2	71	152	3	78	1.62e-11	61.6
MS.gene054552.t1	AT1G33770	43.902	82	34	4	75	153	215	287	1.78e-11	61.6
MS.gene054552.t1	AT5G35410	43.529	85	40	4	68	152	79	155	1.96e-11	61.2
MS.gene054552.t1	AT1G29230	42.683	82	40	3	71	152	143	217	2.25e-11	61.2
MS.gene054552.t1	AT5G35410	43.529	85	40	4	68	152	79	155	2.34e-11	61.2
MS.gene054552.t1	AT4G22940	40.964	83	41	3	75	156	178	253	2.42e-11	61.2
MS.gene054552.t1	AT1G67580	39.024	82	44	2	75	156	480	555	3.40e-11	60.8
MS.gene054552.t1	AT1G67580	39.024	82	44	2	75	156	480	555	3.40e-11	60.8
MS.gene054552.t1	AT4G22940	40.964	83	41	3	75	156	178	253	3.63e-11	60.5
MS.gene054552.t1	AT5G10270	41.860	86	38	4	75	157	114	190	4.73e-11	60.1
MS.gene054552.t1	AT2G46070	37.500	80	43	2	75	154	152	224	4.98e-11	60.1
MS.gene054552.t1	AT2G46070	37.500	80	43	2	75	154	118	190	5.01e-11	60.1
MS.gene054552.t1	AT2G46070	37.500	80	43	2	75	154	118	190	5.31e-11	59.7
MS.gene054552.t1	AT3G45640	42.500	80	39	2	75	154	115	187	5.78e-11	59.7
MS.gene054552.t1	AT5G63370	35.366	82	47	2	75	156	376	451	7.00e-11	59.7
MS.gene054552.t1	AT5G63370	35.366	82	47	2	75	156	376	451	7.00e-11	59.7

Find 21 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACTCTGAACCAGCGTATT+CGG	0.347056	4.1:-87619393	None:intergenic
AAGATTGCTGATTTAGGGCT+TGG	0.348584	4.1:+87619522	MS.gene054552:CDS
AGCGTATTCGGTAACGGTCT+AGG	0.403119	4.1:-87619381	None:intergenic
TTCTTCGTCCATTTCGAGAC+GGG	0.458789	4.1:-87619147	None:intergenic
GAAACCGCAGAATTTGTTGC+TGG	0.472770	4.1:+87619479	MS.gene054552:CDS
AGATTGCTGATTTAGGGCTT+GGG	0.479441	4.1:+87619523	MS.gene054552:CDS
GCGTATTCGGTAACGGTCTA+GGG	0.499711	4.1:-87619380	None:intergenic
GAAACTTCGCGAAGTGCTGT+TGG	0.500317	4.1:-87619179	None:intergenic
ATCAATGAATTTCTTCAGAT+CGG	0.503352	4.1:-87619337	None:intergenic
TGTTGCTGGATCAAGCGAAA+GGG	0.550543	4.1:+87619493	MS.gene054552:CDS
CGTCTCGAAATGGACGAAGA+AGG	0.557799	4.1:+87619149	MS.gene054552:CDS
CTTCTTCGTCCATTTCGAGA+CGG	0.561818	4.1:-87619148	None:intergenic
GAGTGCGACGATTTGGCCTG+TGG	0.574027	4.1:-87619117	None:intergenic
ACTTCGCGAAGTGCTGTTGG+AGG	0.581243	4.1:-87619176	None:intergenic
TTGTTGCTGGATCAAGCGAA+AGG	0.586376	4.1:+87619492	MS.gene054552:CDS
TGAACCAGCGTATTCGGTAA+CGG	0.619160	4.1:-87619387	None:intergenic
TGATCCAGCAACAAATTCTG+CGG	0.619310	4.1:-87619483	None:intergenic
GTTGCTCATTGTCATAGTCA+TGG	0.624457	4.1:+87619438	MS.gene054552:CDS
AAAGCAAAAGAAATCTCCAC+AGG	0.625477	4.1:+87619101	MS.gene054552:CDS
TCGAATACAAGATAGAGAAG+TGG	0.647056	4.1:-87619303	None:intergenic
TAGACCGTTACCGAATACGC+TGG	0.706685	4.1:+87619383	MS.gene054552:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATCAATGAATTTCTTCAGAT+CGG	-	chr4.1:87619340-87619359	None:intergenic	25.0%
!!	TTCATTGATACTTTTCGAAA+AGG	+	chr4.1:87619351-87619370	MS.gene054552:CDS	25.0%
!!!	ATTTTGAAGATTGCTGATTT+AGG	+	chr4.1:87619516-87619535	MS.gene054552:CDS	25.0%
!!!	TTTTGAAGATTGCTGATTTA+GGG	+	chr4.1:87619517-87619536	MS.gene054552:CDS	25.0%
!!	TTTTTGTTTCAGTTGTGCAA+AGG	+	chr4.1:87619414-87619433	MS.gene054552:CDS	30.0%
	AAAGCAAAAGAAATCTCCAC+AGG	+	chr4.1:87619101-87619120	MS.gene054552:CDS	35.0%
	TCGAATACAAGATAGAGAAG+TGG	-	chr4.1:87619306-87619325	None:intergenic	35.0%
!!	AAGATAGAGAAGTGGTTTTG+AGG	-	chr4.1:87619298-87619317	None:intergenic	35.0%
!!!	AGATAGAGAAGTGGTTTTGA+GGG	-	chr4.1:87619297-87619316	None:intergenic	35.0%
!!!	TTTTTTTGAGTGCGACGATT+TGG	-	chr4.1:87619127-87619146	None:intergenic	35.0%
	AAACTCTGAACCAGCGTATT+CGG	-	chr4.1:87619396-87619415	None:intergenic	40.0%
	CAAAAAAACCCGTCTCGAAA+TGG	+	chr4.1:87619139-87619158	MS.gene054552:CDS	40.0%
	GTTGCTCATTGTCATAGTCA+TGG	+	chr4.1:87619438-87619457	MS.gene054552:CDS	40.0%
	TGATCCAGCAACAAATTCTG+CGG	-	chr4.1:87619486-87619505	None:intergenic	40.0%
!!	AAGATTGCTGATTTAGGGCT+TGG	+	chr4.1:87619522-87619541	MS.gene054552:CDS	40.0%
!!	AGATTGCTGATTTAGGGCTT+GGG	+	chr4.1:87619523-87619542	MS.gene054552:CDS	40.0%
!!!	ATAGAGAAGTGGTTTTGAGG+GGG	-	chr4.1:87619295-87619314	None:intergenic	40.0%
!!!	GATAGAGAAGTGGTTTTGAG+GGG	-	chr4.1:87619296-87619315	None:intergenic	40.0%
	CTTCTTCGTCCATTTCGAGA+CGG	-	chr4.1:87619151-87619170	None:intergenic	45.0%
	TGAACCAGCGTATTCGGTAA+CGG	-	chr4.1:87619390-87619409	None:intergenic	45.0%
	TGTTGCTGGATCAAGCGAAA+GGG	+	chr4.1:87619493-87619512	MS.gene054552:CDS	45.0%
	TTCTTCGTCCATTTCGAGAC+GGG	-	chr4.1:87619150-87619169	None:intergenic	45.0%
	TTGTTGCTGGATCAAGCGAA+AGG	+	chr4.1:87619492-87619511	MS.gene054552:CDS	45.0%
!!	GAAACCGCAGAATTTGTTGC+TGG	+	chr4.1:87619479-87619498	MS.gene054552:CDS	45.0%
	CGTCTCGAAATGGACGAAGA+AGG	+	chr4.1:87619149-87619168	MS.gene054552:CDS	50.0%
	TAGACCGTTACCGAATACGC+TGG	+	chr4.1:87619383-87619402	MS.gene054552:CDS	50.0%
!	AGCGTATTCGGTAACGGTCT+AGG	-	chr4.1:87619384-87619403	None:intergenic	50.0%
!	GCGTATTCGGTAACGGTCTA+GGG	-	chr4.1:87619383-87619402	None:intergenic	50.0%
!!	GAAACTTCGCGAAGTGCTGT+TGG	-	chr4.1:87619182-87619201	None:intergenic	50.0%
!!	ACTTCGCGAAGTGCTGTTGG+AGG	-	chr4.1:87619179-87619198	None:intergenic	55.0%
!!	GGTGCTGGGTAGCGTTTTTG+GGG	-	chr4.1:87619274-87619293	None:intergenic	55.0%
!!	GTGCTGGGTAGCGTTTTTGG+GGG	-	chr4.1:87619273-87619292	None:intergenic	55.0%
!!	TGCTGGGTAGCGTTTTTGGG+GGG	-	chr4.1:87619272-87619291	None:intergenic	55.0%
!!!	AAGTGGTTTTGAGGGGGTGC+TGG	-	chr4.1:87619289-87619308	None:intergenic	55.0%
!!!	AGTGGTTTTGAGGGGGTGCT+GGG	-	chr4.1:87619288-87619307	None:intergenic	55.0%
!!!	GGGTGCTGGGTAGCGTTTTT+GGG	-	chr4.1:87619275-87619294	None:intergenic	55.0%
!	GAGTGCGACGATTTGGCCTG+TGG	-	chr4.1:87619120-87619139	None:intergenic	60.0%
!!!	GGGGTGCTGGGTAGCGTTTT+TGG	-	chr4.1:87619276-87619295	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	87619087	87619566	87619087	ID=MS.gene054552
chr4.1	mRNA	87619087	87619566	87619087	ID=MS.gene054552.t1;Parent=MS.gene054552
chr4.1	exon	87619087	87619566	87619087	ID=MS.gene054552.t1.exon1;Parent=MS.gene054552.t1
chr4.1	CDS	87619087	87619566	87619087	ID=cds.MS.gene054552.t1;Parent=MS.gene054552.t1

Gene Sequence

>MS.gene054552

ATGGAAAAGTATACAAAGCAAAAGAAATCTCCACAGGCCAAATCGTCGCACTCAAAAAAACCCGTCTCGAAATGGACGAAGAAGGTGTTCCTCCAACAGCACTTCGCGAAGTTTCTCTTCTTCAAATGCTCTCACAATCTCTCTACATCGTTCGTCTTCTCAACGTCGAACACATCGATAAACCCCCCAAAAACGCTACCCAGCACCCCCTCAAAACCACTTCTCTATCTTGTATTCGAGTATCTTGACACCGATCTGAAGAAATTCATTGATACTTTTCGAAAAGGCACTAACCCTAGACCGTTACCGAATACGCTGGTTCAGAGTTTTTTGTTTCAGTTGTGCAAAGGTGTTGCTCATTGTCATAGTCATGGTGTGTTACATCGTGATTTGAAACCGCAGAATTTGTTGCTGGATCAAGCGAAAGGGATTTTGAAGATTGCTGATTTAGGGCTTGGGAGAGCTTTTACTGTGCGTTGA

Protein sequence

>MS.gene054552.t1

MEKYTKQKKSPQAKSSHSKKPVSKWTKKVFLQQHFAKFLFFKCSHNLSTSFVFSTSNTSINPPKTLPSTPSKPLLYLVFEYLDTDLKKFIDTFRKGTNPRPLPNTLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQAKGILKIADLGLGRAFTVR