Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59076.t1 | XP_003609267.2 | 97.9 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 8.10E-84 | 319.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59076.t1 | G7JVA8 | 97.9 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 5.9e-84 | 319.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59076 | MS.gene32612 | PPI |
| MS.gene59076 | MS.gene072918 | PPI |
| MS.gene59076 | MS.gene014815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59076.t1 | MTR_4g113840 | 97.857 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 4.35e-99 | 282 |
| MS.gene59076.t1 | MTR_2g054750 | 71.429 | 140 | 28 | 1 | 30 | 169 | 1 | 128 | 2.10e-70 | 209 |
| MS.gene59076.t1 | MTR_4g011190 | 47.552 | 143 | 60 | 3 | 35 | 164 | 5 | 145 | 1.45e-39 | 131 |
| MS.gene59076.t1 | MTR_3g107610 | 43.396 | 159 | 58 | 5 | 35 | 164 | 5 | 160 | 7.73e-31 | 110 |
| MS.gene59076.t1 | MTR_3g107610 | 40.580 | 138 | 50 | 5 | 35 | 143 | 5 | 139 | 3.40e-20 | 82.8 |
| MS.gene59076.t1 | MTR_6g069400 | 30.216 | 139 | 75 | 4 | 25 | 163 | 260 | 376 | 5.13e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59076.t1 | AT2G26695 | 67.143 | 140 | 43 | 2 | 30 | 168 | 1 | 138 | 3.75e-69 | 206 |
| MS.gene59076.t1 | AT2G26695 | 67.143 | 140 | 43 | 2 | 30 | 168 | 1 | 138 | 3.75e-69 | 206 |
| MS.gene59076.t1 | AT3G15680 | 42.857 | 154 | 65 | 5 | 35 | 165 | 5 | 158 | 3.25e-34 | 118 |
| MS.gene59076.t1 | AT3G15680 | 42.857 | 154 | 65 | 5 | 35 | 165 | 5 | 158 | 3.25e-34 | 118 |
| MS.gene59076.t1 | AT5G25490 | 37.888 | 161 | 71 | 4 | 35 | 166 | 5 | 165 | 9.63e-31 | 109 |
| MS.gene59076.t1 | AT5G25490 | 37.888 | 161 | 71 | 4 | 35 | 166 | 5 | 165 | 9.63e-31 | 109 |
| MS.gene59076.t1 | AT2G17975 | 32.886 | 149 | 70 | 5 | 35 | 159 | 7 | 149 | 1.33e-14 | 69.7 |
Find 44 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGGGTATCCACAATTT+TGG | 0.191501 | 8.4:+14088290 | None:intergenic |
| GATCATTATTCTTCTGGATA+TGG | 0.206689 | 8.4:-14088130 | MS.gene59076:CDS |
| TTTAAAGATCATTATTCTTC+TGG | 0.213538 | 8.4:-14088136 | MS.gene59076:CDS |
| TGCAAAATGCCAAGGGATTA+TGG | 0.258203 | 8.4:-14087396 | MS.gene59076:intron |
| TTCAGTCCTGTTATATCTAT+AGG | 0.338196 | 8.4:+14088246 | None:intergenic |
| ATCATTATTCTTCTGGATAT+GGG | 0.365982 | 8.4:-14088129 | MS.gene59076:CDS |
| AATTGTGGATACCCAAAGTA+TGG | 0.373044 | 8.4:-14088286 | MS.gene59076:CDS |
| TATCTATAGGTTGATGGGTC+AGG | 0.380599 | 8.4:+14088259 | None:intergenic |
| GGTCAGGGCCTCCATACTTT+GGG | 0.383448 | 8.4:+14088275 | None:intergenic |
| GGGTCAGGGCCTCCATACTT+TGG | 0.410327 | 8.4:+14088274 | None:intergenic |
| AACAGGAAAATGAGCTGGTC+TGG | 0.419264 | 8.4:-14088370 | MS.gene59076:intron |
| ATGGTGAGTTCTGGAGGATA+TGG | 0.428894 | 8.4:-14088100 | MS.gene59076:CDS |
| CATCAACCTATAGATATAAC+AGG | 0.431667 | 8.4:-14088252 | MS.gene59076:CDS |
| CTGTTATATCTATAGGTTGA+TGG | 0.432543 | 8.4:+14088253 | None:intergenic |
| CTGAAACGTTGGCAGGGGAC+TGG | 0.496040 | 8.4:-14088228 | MS.gene59076:CDS |
| ACCAGTTGAAAGACCTATTG+TGG | 0.504479 | 8.4:+14089050 | None:intergenic |
| AACAGGACTGAAACGTTGGC+AGG | 0.506879 | 8.4:-14088235 | MS.gene59076:CDS |
| TTATTCATACTCTTCTTCAA+AGG | 0.512519 | 8.4:-14088925 | MS.gene59076:intron |
| TGAGCTGGTCTGGAGGAGAT+TGG | 0.515298 | 8.4:-14088360 | MS.gene59076:CDS |
| TGTTATATCTATAGGTTGAT+GGG | 0.518610 | 8.4:+14088254 | None:intergenic |
| CCCACAATAGGTCTTTCAAC+TGG | 0.530285 | 8.4:-14089051 | MS.gene59076:intron |
| CACATCTATAGCAGTTTGAT+CGG | 0.536065 | 8.4:+14088164 | None:intergenic |
| ATCTATAGGTTGATGGGTCA+GGG | 0.537334 | 8.4:+14088260 | None:intergenic |
| CAGGATGGAAAAGTGGAGAC+TGG | 0.542885 | 8.4:-14088057 | MS.gene59076:CDS |
| TCATTATTCTTCTGGATATG+GGG | 0.550458 | 8.4:-14088128 | MS.gene59076:CDS |
| CCAGTTGAAAGACCTATTGT+GGG | 0.553725 | 8.4:+14089051 | None:intergenic |
| GCTATAAATGCAAAATGCCA+AGG | 0.555528 | 8.4:-14087404 | MS.gene59076:CDS |
| AGGAAAATGAGCTGGTCTGG+AGG | 0.557211 | 8.4:-14088367 | MS.gene59076:CDS |
| GTGGAGACTGGATTTGCCCT+AGG | 0.558224 | 8.4:-14088045 | MS.gene59076:intron |
| AGAGAAGCATGCCAAAATTG+TGG | 0.558332 | 8.4:-14088301 | MS.gene59076:CDS |
| GGTAACATGGTGAGTTCTGG+AGG | 0.561232 | 8.4:-14088106 | MS.gene59076:CDS |
| ACAGGACTGAAACGTTGGCA+GGG | 0.573031 | 8.4:-14088234 | MS.gene59076:CDS |
| ATATAACAGGACTGAAACGT+TGG | 0.578735 | 8.4:-14088239 | MS.gene59076:CDS |
| CAATGAACAGGAAAATGAGC+TGG | 0.583001 | 8.4:-14088375 | MS.gene59076:intron |
| CAGGACTGAAACGTTGGCAG+GGG | 0.599861 | 8.4:-14088233 | MS.gene59076:CDS |
| CATTATTCTTCTGGATATGG+GGG | 0.604836 | 8.4:-14088127 | MS.gene59076:CDS |
| GAATGCATAATTATGCAAGC+AGG | 0.627959 | 8.4:-14087434 | MS.gene59076:CDS |
| CGATCAAACTGCTATAGATG+TGG | 0.635461 | 8.4:-14088163 | MS.gene59076:CDS |
| TGATGAAGCAGAATTGGCTG+TGG | 0.639985 | 8.4:-14087456 | MS.gene59076:intron |
| CTATAAATGCAAAATGCCAA+GGG | 0.640939 | 8.4:-14087403 | MS.gene59076:CDS |
| TCTGGAGGAGATTGGATGTG+TGG | 0.641624 | 8.4:-14088352 | MS.gene59076:CDS |
| TGTGGATACCCAAAGTATGG+AGG | 0.657966 | 8.4:-14088283 | MS.gene59076:CDS |
| CAGTTGAAAGACCTATTGTG+GGG | 0.686483 | 8.4:+14089052 | None:intergenic |
| AGTTGAAAGACCTATTGTGG+GGG | 0.713227 | 8.4:+14089053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTCATTATTTTTTTTAT+AGG | + | chr8.4:14087768-14087787 | None:intergenic | 10.0% |
| !!! | TTTTCCAAAAATAATAATAA+TGG | - | chr8.4:14088718-14088737 | MS.gene59076:intron | 10.0% |
| !! | AATGATTAAGATTAAGAATA+AGG | - | chr8.4:14088659-14088678 | MS.gene59076:intron | 15.0% |
| !! | GTTATTTACTTTATACTTAT+TGG | + | chr8.4:14087517-14087536 | None:intergenic | 15.0% |
| !!! | ATCACCATTATTATTATTTT+TGG | + | chr8.4:14088725-14088744 | None:intergenic | 15.0% |
| !!! | TCTTAATCTTAATCATTTTA+TGG | + | chr8.4:14088656-14088675 | None:intergenic | 15.0% |
| !!! | TGGTAAATTTTAAGATATTT+AGG | + | chr8.4:14087902-14087921 | None:intergenic | 15.0% |
| !! | AAAACAAAGATACTCAAATT+AGG | + | chr8.4:14088833-14088852 | None:intergenic | 20.0% |
| !! | AAACAAAGATACTCAAATTA+GGG | + | chr8.4:14088832-14088851 | None:intergenic | 20.0% |
| !! | TATTTGTGCAAATAACTTAA+TGG | - | chr8.4:14087584-14087603 | MS.gene59076:intron | 20.0% |
| !! | TCATAACTCATAACTTATAA+AGG | - | chr8.4:14087640-14087659 | MS.gene59076:intron | 20.0% |
| !! | TTATTACTATTGTTTGTTTC+AGG | - | chr8.4:14089044-14089063 | MS.gene59076:intron | 20.0% |
| !! | TTTAAAGATCATTATTCTTC+TGG | - | chr8.4:14088176-14088195 | MS.gene59076:CDS | 20.0% |
| !!! | TGCACAAATAAATATAGTTT+TGG | + | chr8.4:14087574-14087593 | None:intergenic | 20.0% |
| !!! | TTAAGAATGGTTTGTAAATT+AGG | + | chr8.4:14087324-14087343 | None:intergenic | 20.0% |
| ! | AATATGTCAACTGTCATAAA+AGG | - | chr8.4:14088453-14088472 | MS.gene59076:intron | 25.0% |
| ! | AATGTTAGTATGTTAGTTGT+TGG | + | chr8.4:14087743-14087762 | None:intergenic | 25.0% |
| ! | ATCATTATTCTTCTGGATAT+GGG | - | chr8.4:14088183-14088202 | MS.gene59076:CDS | 25.0% |
| ! | GCAATCTCTTTATTAATCAA+AGG | + | chr8.4:14088407-14088426 | None:intergenic | 25.0% |
| ! | TAGAGATGGTTATATATCAT+TGG | - | chr8.4:14089010-14089029 | MS.gene59076:intron | 25.0% |
| ! | TCAATATAAACAAGTTCAGT+TGG | - | chr8.4:14088759-14088778 | MS.gene59076:intron | 25.0% |
| ! | TTATTCATACTCTTCTTCAA+AGG | - | chr8.4:14087387-14087406 | MS.gene59076:intron | 25.0% |
| ! | TTGCTATAGTAGTTTAAGAA+TGG | + | chr8.4:14087337-14087356 | None:intergenic | 25.0% |
| ! | TTTATACTTATTGGAGTTTC+AGG | + | chr8.4:14087508-14087527 | None:intergenic | 25.0% |
| !! | TATGACAGTTGACATATTTT+TGG | + | chr8.4:14088451-14088470 | None:intergenic | 25.0% |
| !! | TGTGTCTTTTAATATAAGCA+GGG | - | chr8.4:14087616-14087635 | MS.gene59076:intron | 25.0% |
| !!! | TGTTATATCTATAGGTTGAT+GGG | + | chr8.4:14088061-14088080 | None:intergenic | 25.0% |
| AAAGATACTCAAATTAGGGA+AGG | + | chr8.4:14088828-14088847 | None:intergenic | 30.0% | |
| AAGATAATGTGAACTAACCT+AGG | + | chr8.4:14088287-14088306 | None:intergenic | 30.0% | |
| AAGATACTCAAATTAGGGAA+GGG | + | chr8.4:14088827-14088846 | None:intergenic | 30.0% | |
| AAGGAAGATTTGATAAGCTA+AGG | - | chr8.4:14087659-14087678 | MS.gene59076:intron | 30.0% | |
| AGATAATGTGAACTAACCTA+GGG | + | chr8.4:14088286-14088305 | None:intergenic | 30.0% | |
| CATCAACCTATAGATATAAC+AGG | - | chr8.4:14088060-14088079 | MS.gene59076:CDS | 30.0% | |
| CTATAAATGCAAAATGCCAA+GGG | - | chr8.4:14088909-14088928 | MS.gene59076:intron | 30.0% | |
| GAGAAGGATAGGATTATAAT+CGG | - | chr8.4:14088566-14088585 | MS.gene59076:intron | 30.0% | |
| GATAATTACAATACAGACAG+TGG | - | chr8.4:14088690-14088709 | MS.gene59076:intron | 30.0% | |
| GATCATTATTCTTCTGGATA+TGG | - | chr8.4:14088182-14088201 | MS.gene59076:CDS | 30.0% | |
| GTTTCATTCATCTTGAAACT+AGG | - | chr8.4:14087479-14087498 | MS.gene59076:intron | 30.0% | |
| TCATTATTCTTCTGGATATG+GGG | - | chr8.4:14088184-14088203 | MS.gene59076:CDS | 30.0% | |
| TTACTATTGTTTGTTTCAGG+CGG | - | chr8.4:14089047-14089066 | MS.gene59076:intron | 30.0% | |
| TTATAATCCTATCCTTCTCT+CGG | + | chr8.4:14088565-14088584 | None:intergenic | 30.0% | |
| TTCAGTCCTGTTATATCTAT+AGG | + | chr8.4:14088069-14088088 | None:intergenic | 30.0% | |
| TTTATGTGATGAAGCAGAAT+TGG | - | chr8.4:14088850-14088869 | MS.gene59076:intron | 30.0% | |
| ! | AATAATGGTGATGATACAGA+CGG | - | chr8.4:14088733-14088752 | MS.gene59076:intron | 30.0% |
| ! | AGTTTTCATATCTCAAAACC+TGG | + | chr8.4:14087713-14087732 | None:intergenic | 30.0% |
| ! | CTGAGAAAAAACACTTTTAG+AGG | + | chr8.4:14088381-14088400 | None:intergenic | 30.0% |
| ! | CTGTTATATCTATAGGTTGA+TGG | + | chr8.4:14088062-14088081 | None:intergenic | 30.0% |
| ! | GTGTCTTTTAATATAAGCAG+GGG | - | chr8.4:14087617-14087636 | MS.gene59076:intron | 30.0% |
| ! | GTGTGTCTTTTAATATAAGC+AGG | - | chr8.4:14087615-14087634 | MS.gene59076:intron | 30.0% |
| !! | CACTATATGTTACTTTGCAA+GGG | + | chr8.4:14088592-14088611 | None:intergenic | 30.0% |
| !! | TCACTATATGTTACTTTGCA+AGG | + | chr8.4:14088593-14088612 | None:intergenic | 30.0% |
| AAGACAGATGATACGTCTAA+AGG | + | chr8.4:14088956-14088975 | None:intergenic | 35.0% | |
| AATTGTGGATACCCAAAGTA+TGG | - | chr8.4:14088026-14088045 | MS.gene59076:intron | 35.0% | |
| AGACAGATGATACGTCTAAA+GGG | + | chr8.4:14088955-14088974 | None:intergenic | 35.0% | |
| AGTTTGATGCTTATGTTGTG+AGG | + | chr8.4:14087296-14087315 | None:intergenic | 35.0% | |
| ATATAACAGGACTGAAACGT+TGG | - | chr8.4:14088073-14088092 | MS.gene59076:CDS | 35.0% | |
| CACATCTATAGCAGTTTGAT+CGG | + | chr8.4:14088151-14088170 | None:intergenic | 35.0% | |
| CATTATTCTTCTGGATATGG+GGG | - | chr8.4:14088185-14088204 | MS.gene59076:CDS | 35.0% | |
| GAATGCATAATTATGCAAGC+AGG | - | chr8.4:14088878-14088897 | MS.gene59076:intron | 35.0% | |
| GCTATAAATGCAAAATGCCA+AGG | - | chr8.4:14088908-14088927 | MS.gene59076:intron | 35.0% | |
| ! | ACTTTGGGTATCCACAATTT+TGG | + | chr8.4:14088025-14088044 | None:intergenic | 35.0% |
| ! | TGCTTTCATGACAGAGTATT+CGG | - | chr8.4:14087544-14087563 | MS.gene59076:intron | 35.0% |
| ! | TTTTGCACTTCTATGAACTG+CGG | - | chr8.4:14088107-14088126 | MS.gene59076:CDS | 35.0% |
| !! | GAATTTTAAGTAGCACATCC+AGG | - | chr8.4:14087692-14087711 | MS.gene59076:intron | 35.0% |
| !! | TGAGTACTGATAGAACTTTG+TGG | - | chr8.4:14088316-14088335 | MS.gene59076:CDS | 35.0% |
| !!! | AAGAGTGCAGTATTTTTTGC+AGG | - | chr8.4:14088624-14088643 | MS.gene59076:intron | 35.0% |
| AATTCCAGGCTACATACACA+GGG | - | chr8.4:14087838-14087857 | MS.gene59076:intron | 40.0% | |
| ACCAGTTGAAAGACCTATTG+TGG | + | chr8.4:14087265-14087284 | None:intergenic | 40.0% | |
| AGTTGAAAGACCTATTGTGG+GGG | + | chr8.4:14087262-14087281 | None:intergenic | 40.0% | |
| CAATGAACAGGAAAATGAGC+TGG | - | chr8.4:14087937-14087956 | MS.gene59076:intron | 40.0% | |
| CACATGTTTCCACAATGAAC+AGG | - | chr8.4:14087925-14087944 | MS.gene59076:intron | 40.0% | |
| CAGTTGAAAGACCTATTGTG+GGG | + | chr8.4:14087263-14087282 | None:intergenic | 40.0% | |
| CATTGTGGAAACATGTGAAG+TGG | + | chr8.4:14087922-14087941 | None:intergenic | 40.0% | |
| CCAGTTGAAAGACCTATTGT+GGG | + | chr8.4:14087264-14087283 | None:intergenic | 40.0% | |
| CGATCAAACTGCTATAGATG+TGG | - | chr8.4:14088149-14088168 | MS.gene59076:CDS | 40.0% | |
| TGCAAAATGCCAAGGGATTA+TGG | - | chr8.4:14088916-14088935 | MS.gene59076:intron | 40.0% | |
| ! | AGAGAAGCATGCCAAAATTG+TGG | - | chr8.4:14088011-14088030 | MS.gene59076:intron | 40.0% |
| ! | CTTTTCTCACCATAATCCCT+TGG | + | chr8.4:14088928-14088947 | None:intergenic | 40.0% |
| ! | GCTCATTTTCCTGTTCATTG+TGG | + | chr8.4:14087937-14087956 | None:intergenic | 40.0% |
| ! | GTCAAGCTGTTCTTTAGAGA+TGG | - | chr8.4:14088996-14089015 | MS.gene59076:intron | 40.0% |
| !! | ATCTATAGGTTGATGGGTCA+GGG | + | chr8.4:14088055-14088074 | None:intergenic | 40.0% |
| !! | TATCTATAGGTTGATGGGTC+AGG | + | chr8.4:14088056-14088075 | None:intergenic | 40.0% |
| AACAGGAAAATGAGCTGGTC+TGG | - | chr8.4:14087942-14087961 | MS.gene59076:intron | 45.0% | |
| AATTCCCTGTGTATGTAGCC+TGG | + | chr8.4:14087845-14087864 | None:intergenic | 45.0% | |
| CAATTCCAGGCTACATACAC+AGG | - | chr8.4:14087837-14087856 | MS.gene59076:intron | 45.0% | |
| CCCACAATAGGTCTTTCAAC+TGG | - | chr8.4:14087261-14087280 | MS.gene59076:intron | 45.0% | |
| CTGTGTATGTAGCCTGGAAT+TGG | + | chr8.4:14087839-14087858 | None:intergenic | 45.0% | |
| TAATCCTATCCTTCTCTCGG+AGG | + | chr8.4:14088562-14088581 | None:intergenic | 45.0% | |
| TGATGAAGCAGAATTGGCTG+TGG | - | chr8.4:14088856-14088875 | MS.gene59076:intron | 45.0% | |
| TGTGGATACCCAAAGTATGG+AGG | - | chr8.4:14088029-14088048 | MS.gene59076:intron | 45.0% | |
| TTCTGGATATGGGGGTAACA+TGG | - | chr8.4:14088193-14088212 | MS.gene59076:CDS | 45.0% | |
| ! | AATGGTGATGATACAGACGG+TGG | - | chr8.4:14088736-14088755 | MS.gene59076:intron | 45.0% |
| !! | AGTCTCCACTTTTCCATCCT+GGG | + | chr8.4:14088256-14088275 | None:intergenic | 45.0% |
| !! | ATGGTGAGTTCTGGAGGATA+TGG | - | chr8.4:14088212-14088231 | MS.gene59076:CDS | 45.0% |
| AACAGGACTGAAACGTTGGC+AGG | - | chr8.4:14088077-14088096 | MS.gene59076:CDS | 50.0% | |
| ACAGGACTGAAACGTTGGCA+GGG | - | chr8.4:14088078-14088097 | MS.gene59076:CDS | 50.0% | |
| CAGGATGGAAAAGTGGAGAC+TGG | - | chr8.4:14088255-14088274 | MS.gene59076:CDS | 50.0% | |
| CCTTCTCTCGGAGGAAGAAA+AGG | + | chr8.4:14088553-14088572 | None:intergenic | 50.0% | |
| TCCACTAACGTGCCAATTCC+AGG | - | chr8.4:14087824-14087843 | MS.gene59076:intron | 50.0% | |
| TCTGGAGGAGATTGGATGTG+TGG | - | chr8.4:14087960-14087979 | MS.gene59076:intron | 50.0% | |
| TCTTCCTCCGAGAGAAGGAT+AGG | - | chr8.4:14088555-14088574 | MS.gene59076:intron | 50.0% | |
| ! | AGGAAAATGAGCTGGTCTGG+AGG | - | chr8.4:14087945-14087964 | MS.gene59076:intron | 50.0% |
| ! | CCTTTTCTTCCTCCGAGAGA+AGG | - | chr8.4:14088550-14088569 | MS.gene59076:intron | 50.0% |
| ! | GGTAACATGGTGAGTTCTGG+AGG | - | chr8.4:14088206-14088225 | MS.gene59076:CDS | 50.0% |
| !! | CAGTCTCCACTTTTCCATCC+TGG | + | chr8.4:14088257-14088276 | None:intergenic | 50.0% |
| !! | GTCTCCACTTTTCCATCCTG+GGG | + | chr8.4:14088255-14088274 | None:intergenic | 50.0% |
| !! | TCTCCACTTTTCCATCCTGG+GGG | + | chr8.4:14088254-14088273 | None:intergenic | 50.0% |
| ACTGTAGTTCTCCCCCAGGA+TGG | - | chr8.4:14088240-14088259 | MS.gene59076:CDS | 55.0% | |
| CAGGACTGAAACGTTGGCAG+GGG | - | chr8.4:14088079-14088098 | MS.gene59076:CDS | 55.0% | |
| GCCTGGAATTGGCACGTTAG+TGG | + | chr8.4:14087828-14087847 | None:intergenic | 55.0% | |
| GGGGGTAACATGGTGAGTTC+TGG | - | chr8.4:14088203-14088222 | MS.gene59076:CDS | 55.0% | |
| GGTCAGGGCCTCCATACTTT+GGG | + | chr8.4:14088040-14088059 | None:intergenic | 55.0% | |
| GTGGAGACTGGATTTGCCCT+AGG | - | chr8.4:14088267-14088286 | MS.gene59076:CDS | 55.0% | |
| TCAGACTGTAGTTCTCCCCC+AGG | - | chr8.4:14088236-14088255 | MS.gene59076:CDS | 55.0% | |
| TCTCCCCCAGGATGGAAAAG+TGG | - | chr8.4:14088248-14088267 | MS.gene59076:CDS | 55.0% | |
| ! | TGAGCTGGTCTGGAGGAGAT+TGG | - | chr8.4:14087952-14087971 | MS.gene59076:intron | 55.0% |
| CTGAAACGTTGGCAGGGGAC+TGG | - | chr8.4:14088084-14088103 | MS.gene59076:CDS | 60.0% | |
| GGGTCAGGGCCTCCATACTT+TGG | + | chr8.4:14088041-14088060 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 14087255 | 14089079 | 14087255 | ID=MS.gene59076 |
| chr8.4 | mRNA | 14087255 | 14089079 | 14087255 | ID=MS.gene59076.t1;Parent=MS.gene59076 |
| chr8.4 | exon | 14089052 | 14089079 | 14089052 | ID=MS.gene59076.t1.exon1;Parent=MS.gene59076.t1 |
| chr8.4 | CDS | 14089052 | 14089079 | 14089052 | ID=cds.MS.gene59076.t1;Parent=MS.gene59076.t1 |
| chr8.4 | exon | 14088926 | 14088980 | 14088926 | ID=MS.gene59076.t1.exon2;Parent=MS.gene59076.t1 |
| chr8.4 | CDS | 14088926 | 14088980 | 14088926 | ID=cds.MS.gene59076.t1;Parent=MS.gene59076.t1 |
| chr8.4 | exon | 14088046 | 14088387 | 14088046 | ID=MS.gene59076.t1.exon3;Parent=MS.gene59076.t1 |
| chr8.4 | CDS | 14088046 | 14088387 | 14088046 | ID=cds.MS.gene59076.t1;Parent=MS.gene59076.t1 |
| chr8.4 | exon | 14087397 | 14087467 | 14087397 | ID=MS.gene59076.t1.exon4;Parent=MS.gene59076.t1 |
| chr8.4 | CDS | 14087397 | 14087467 | 14087397 | ID=cds.MS.gene59076.t1;Parent=MS.gene59076.t1 |
| chr8.4 | exon | 14087255 | 14087268 | 14087255 | ID=MS.gene59076.t1.exon5;Parent=MS.gene59076.t1 |
| chr8.4 | CDS | 14087255 | 14087268 | 14087255 | ID=cds.MS.gene59076.t1;Parent=MS.gene59076.t1 |
| Gene Sequence |
| Protein sequence |
