Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59495.t1 | XP_003612212.1 | 98.4 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 1.30E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59495.t1 | U3KRF2 | 86.5 | 377 | 51 | 0 | 1 | 377 | 69 | 445 | 3.2e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59495.t1 | G7JXJ9 | 98.4 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 9.7e-212 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056975 | MS.gene59495 | 0.800746 | 1.25E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59495 | MS.gene057128 | PPI |
| MS.gene59495 | MS.gene06683 | PPI |
| MS.gene013566 | MS.gene59495 | PPI |
| MS.gene59495 | MS.gene06894 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59495.t1 | MTR_5g022580 | 98.408 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59495.t1 | AT5G66120 | 85.205 | 365 | 54 | 0 | 13 | 377 | 78 | 442 | 0.0 | 658 |
| MS.gene59495.t1 | AT5G66120 | 86.012 | 336 | 47 | 0 | 42 | 377 | 3 | 338 | 0.0 | 608 |
Find 105 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAGAAGTTATAAAGTA+TGG | 0.237109 | 5.4:+14080739 | MS.gene59495:CDS |
| AGTCAGGGCTACATTGAATT+TGG | 0.243315 | 5.4:+14081448 | MS.gene59495:CDS |
| CACCATTGTTAACGTTGATT+TGG | 0.244416 | 5.4:+14079035 | MS.gene59495:CDS |
| CAACCCGGATCCGATATAAA+TGG | 0.271554 | 5.4:-14079073 | None:intergenic |
| TTATAAAGTATGGGCTCATT+AGG | 0.291558 | 5.4:+14080749 | MS.gene59495:CDS |
| TTGAGACTTATCCTTCTAAA+AGG | 0.299398 | 5.4:+14083623 | MS.gene59495:CDS |
| TTGAATTTGGGTCATACATT+TGG | 0.323104 | 5.4:+14081461 | MS.gene59495:CDS |
| ATAGCATATGCCAGTGCATT+AGG | 0.327626 | 5.4:-14081368 | None:intergenic |
| TCTTCAGTTGGTGGCAAAAC+TGG | 0.330298 | 5.4:+14080604 | MS.gene59495:CDS |
| ACACTCTCAACAGAAACATT+TGG | 0.341474 | 5.4:-14080140 | None:intergenic |
| CACTCTCAACAGAAACATTT+GGG | 0.343857 | 5.4:-14080139 | None:intergenic |
| ACCATTGTTAACGTTGATTT+GGG | 0.350396 | 5.4:+14079036 | MS.gene59495:CDS |
| ATGTCCACAGTCATCATTTC+AGG | 0.366546 | 5.4:-14083467 | None:intergenic |
| TCAGATTCCAACCACTGTTA+TGG | 0.372653 | 5.4:+14080428 | MS.gene59495:CDS |
| ATGAGAGAGAAGGTGGAGTC+AGG | 0.374462 | 5.4:+14081432 | MS.gene59495:CDS |
| TTAACGTTGATTTGGGTAAT+CGG | 0.380324 | 5.4:+14079043 | MS.gene59495:CDS |
| CAAGGCCGAGGTTGTGTCCT+TGG | 0.381716 | 5.4:+14081409 | MS.gene59495:CDS |
| GCCCTTGGAGGTGGTGTGAT+TGG | 0.385690 | 5.4:+14080354 | MS.gene59495:CDS |
| CATGGAGAGGCTGTTGCAGC+TGG | 0.391153 | 5.4:+14083250 | MS.gene59495:CDS |
| ATCATTTCAGGAGGCACAAT+TGG | 0.396114 | 5.4:-14083455 | None:intergenic |
| CCAGAGAGGGAACTGGCATC+AGG | 0.397934 | 5.4:+14080715 | MS.gene59495:CDS |
| GTCAGGGCTACATTGAATTT+GGG | 0.399767 | 5.4:+14081449 | MS.gene59495:CDS |
| CGGAGCTATCCCATTTATAT+CGG | 0.402539 | 5.4:+14079063 | MS.gene59495:CDS |
| GGCTATGGGCAGTGGCTTCA+TGG | 0.408977 | 5.4:+14083232 | MS.gene59495:CDS |
| TATCCCATTTATATCGGATC+CGG | 0.423234 | 5.4:+14079069 | MS.gene59495:CDS |
| CCGTAGTGTTAGTGACAATA+AGG | 0.430212 | 5.4:-14080067 | None:intergenic |
| CCCCTTGGGAAGAACTTGAT+TGG | 0.431232 | 5.4:+14080637 | MS.gene59495:CDS |
| AATTACCTTTGAAGAAGTTC+AGG | 0.444038 | 5.4:-14079105 | None:intergenic |
| CCTGATGCCAGTTCCCTCTC+TGG | 0.447867 | 5.4:-14080715 | None:intergenic |
| TTAACAATGGTGGGAACATC+AGG | 0.460642 | 5.4:-14079024 | None:intergenic |
| TATAAAGTATGGGCTCATTA+GGG | 0.460868 | 5.4:+14080750 | MS.gene59495:CDS |
| ATAGAAACTAGCGTTGGCTA+TGG | 0.484418 | 5.4:+14083217 | MS.gene59495:CDS |
| TCCTTGTACTGCTCACCATC+CGG | 0.486431 | 5.4:-14080170 | None:intergenic |
| TGAGAGAGAAGGTGGAGTCA+GGG | 0.489001 | 5.4:+14081433 | MS.gene59495:CDS |
| GGTATATCAGGTTGATAAGA+AGG | 0.492255 | 5.4:+14083586 | MS.gene59495:intron |
| AACCCGGATCCGATATAAAT+GGG | 0.495824 | 5.4:-14079072 | None:intergenic |
| TAGGTTGATTCTTCAGTTGG+TGG | 0.498341 | 5.4:+14080595 | MS.gene59495:intron |
| CAAGGCCATTGAGTCTCGAT+TGG | 0.499244 | 5.4:+14080311 | MS.gene59495:CDS |
| GTTGTTGATGCTTTAACAAG+TGG | 0.499540 | 5.4:+14080113 | MS.gene59495:CDS |
| CAATAAGGACCTTCTTTCCA+TGG | 0.505079 | 5.4:-14080052 | None:intergenic |
| CTAGCGTTGGCTATGGGCAG+TGG | 0.507771 | 5.4:+14083224 | MS.gene59495:CDS |
| ATATGCAGGCATTAATGGCC+AGG | 0.511276 | 5.4:+14080803 | MS.gene59495:CDS |
| TTGTAGGTTGATTCTTCAGT+TGG | 0.512666 | 5.4:+14080592 | MS.gene59495:intron |
| CCGATCCAATCGAGACTCAA+TGG | 0.515263 | 5.4:-14080316 | None:intergenic |
| ATCCTTCTAAAAGGTTCTCT+AGG | 0.515459 | 5.4:+14083632 | MS.gene59495:CDS |
| TTGCAGAAGTTATAAAGTAT+GGG | 0.520923 | 5.4:+14080740 | MS.gene59495:CDS |
| CTGGTATAAACCATCCCCTT+GGG | 0.525333 | 5.4:+14080623 | MS.gene59495:CDS |
| TACATTACCAGAGAGGGAAC+TGG | 0.528745 | 5.4:+14080708 | MS.gene59495:CDS |
| ACCTGTGCCATAACAGTGGT+TGG | 0.531757 | 5.4:-14080435 | None:intergenic |
| ACCGGATGGTGAGCAGTACA+AGG | 0.533496 | 5.4:+14080169 | MS.gene59495:CDS |
| CAAATCAACGTTAACAATGG+TGG | 0.540010 | 5.4:-14079034 | None:intergenic |
| ACATGTCATACCGCCTCGGT+TGG | 0.540345 | 5.4:+14083378 | MS.gene59495:CDS |
| ATCCCATTTATATCGGATCC+GGG | 0.542219 | 5.4:+14079070 | MS.gene59495:CDS |
| TCAAGTTCTTCCCAAGGGGA+TGG | 0.545666 | 5.4:-14080633 | None:intergenic |
| CGCCAATCACACCACCTCCA+AGG | 0.548112 | 5.4:-14080356 | None:intergenic |
| TAGGCATGTCCATGGAAAGA+AGG | 0.549371 | 5.4:+14080043 | MS.gene59495:intron |
| TAGAAACTAGCGTTGGCTAT+GGG | 0.550835 | 5.4:+14083218 | MS.gene59495:CDS |
| TGGGCAGTGGCTTCATGGAG+AGG | 0.553068 | 5.4:+14083237 | MS.gene59495:CDS |
| TATAATAATAGGCATGTCCA+TGG | 0.555537 | 5.4:+14080035 | MS.gene59495:intron |
| CACGGGAGAATATGACAGAA+AGG | 0.557955 | 5.4:+14083667 | MS.gene59495:CDS |
| CAATGGTGGGAACATCAGGT+TGG | 0.560667 | 5.4:-14079020 | None:intergenic |
| TTGCAGAGATCCTAATGCAC+TGG | 0.562804 | 5.4:+14081358 | MS.gene59495:intron |
| ACTGGTATAAACCATCCCCT+TGG | 0.563182 | 5.4:+14080622 | MS.gene59495:CDS |
| ATAAACCTGAACTTCTTCAA+AGG | 0.564077 | 5.4:+14079100 | MS.gene59495:CDS |
| AAATCAACGTTAACAATGGT+GGG | 0.565138 | 5.4:-14079033 | None:intergenic |
| TCCAACCACTGTTATGGCAC+AGG | 0.567423 | 5.4:+14080434 | MS.gene59495:CDS |
| ACCAATCAAGTTCTTCCCAA+GGG | 0.573622 | 5.4:-14080638 | None:intergenic |
| CACCAATCAAGTTCTTCCCA+AGG | 0.573892 | 5.4:-14080639 | None:intergenic |
| CAGAGAGGGAACTGGCATCA+GGG | 0.581095 | 5.4:+14080716 | MS.gene59495:CDS |
| GCCAATCACACCACCTCCAA+GGG | 0.583987 | 5.4:-14080355 | None:intergenic |
| CTATAAGCACACATTGAGGT+TGG | 0.590057 | 5.4:-14080669 | None:intergenic |
| CCTTATTGTCACTAACACTA+CGG | 0.592911 | 5.4:+14080067 | MS.gene59495:CDS |
| GTTGATAAGAAGGTAGCAGA+TGG | 0.593067 | 5.4:+14083596 | MS.gene59495:CDS |
| TGCACCTTTGTATCTAGACA+AGG | 0.596590 | 5.4:+14080091 | MS.gene59495:CDS |
| TTCAGGTTTATTGAGCAACC+CGG | 0.602424 | 5.4:-14079088 | None:intergenic |
| GTTGACATGTCATACCGCCT+CGG | 0.604970 | 5.4:+14083374 | MS.gene59495:CDS |
| AGAGGCTGTTGCAGCTGGCA+CGG | 0.606315 | 5.4:+14083255 | MS.gene59495:CDS |
| TCCACCTTCTCTCTCATCCA+AGG | 0.607242 | 5.4:-14081426 | None:intergenic |
| ATTAGATACATTACCAGAGA+GGG | 0.613639 | 5.4:+14080702 | MS.gene59495:CDS |
| ATCATGTGAAAACAAGGCCG+AGG | 0.615090 | 5.4:+14081397 | MS.gene59495:CDS |
| TTGAGTCTCGATTGGATCGG+CGG | 0.622236 | 5.4:+14080319 | MS.gene59495:CDS |
| ACCCAAATCAACGTTAACAA+TGG | 0.628458 | 5.4:-14079037 | None:intergenic |
| CTCATCCAAGGACACAACCT+CGG | 0.631144 | 5.4:-14081414 | None:intergenic |
| ACAACCTTGTCTAGATACAA+AGG | 0.633531 | 5.4:-14080095 | None:intergenic |
| GGACATGTTTAAATCTGTCA+TGG | 0.638172 | 5.4:+14083484 | MS.gene59495:CDS |
| TAGGCAATAGAAACTAGCGT+TGG | 0.642948 | 5.4:+14083211 | MS.gene59495:intron |
| AAAGCGATCATGTGAAAACA+AGG | 0.643424 | 5.4:+14081391 | MS.gene59495:CDS |
| TCCTTGGATGAGAGAGAAGG+TGG | 0.653001 | 5.4:+14081425 | MS.gene59495:CDS |
| AACACCACGTAGGAATGAAG+CGG | 0.653409 | 5.4:-14080397 | None:intergenic |
| TGGTGAGCAGTACAAGGACA+TGG | 0.659373 | 5.4:+14080175 | MS.gene59495:CDS |
| TCCACAGTCATCATTTCAGG+AGG | 0.661026 | 5.4:-14083464 | None:intergenic |
| CCATTGAGTCTCGATTGGAT+CGG | 0.669888 | 5.4:+14080316 | MS.gene59495:CDS |
| GGTGTGATTGGCGACATGTG+TGG | 0.672916 | 5.4:+14080366 | MS.gene59495:CDS |
| GTGTCCTTGGATGAGAGAGA+AGG | 0.674887 | 5.4:+14081422 | MS.gene59495:CDS |
| CCAATCAAGTTCTTCCCAAG+GGG | 0.683553 | 5.4:-14080637 | None:intergenic |
| TAAGACCTGTGCCATAACAG+TGG | 0.688059 | 5.4:-14080439 | None:intergenic |
| GTGTCTATAAGCACACATTG+AGG | 0.695429 | 5.4:-14080673 | None:intergenic |
| TCTTATGAAAGTGTTTGACA+AGG | 0.696371 | 5.4:+14080293 | MS.gene59495:CDS |
| GCCTCCTGAAATGATGACTG+TGG | 0.699500 | 5.4:+14083463 | MS.gene59495:CDS |
| CATTAGATACATTACCAGAG+AGG | 0.702812 | 5.4:+14080701 | MS.gene59495:CDS |
| GAATAAAATTAACACCACGT+AGG | 0.705762 | 5.4:-14080407 | None:intergenic |
| TAGAATCATCAATCCAACCG+AGG | 0.718923 | 5.4:-14083391 | None:intergenic |
| CATGTTTAAATCTGTCATGG+CGG | 0.724496 | 5.4:+14083487 | MS.gene59495:CDS |
| GCTGCCGCTTCATTCCTACG+TGG | 0.729031 | 5.4:+14080393 | MS.gene59495:CDS |
| AATCATCAATCCAACCGAGG+CGG | 0.730486 | 5.4:-14083388 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAATTTATAGACAAA+TGG | + | chr5.4:14079515-14079534 | MS.gene59495:intron | 10.0% |
| !! | TATTTCATGTTTATAATAAT+AGG | + | chr5.4:14080024-14080043 | MS.gene59495:intron | 10.0% |
| !! | TCAATTTAATAAATATTAGA+TGG | + | chr5.4:14081661-14081680 | MS.gene59495:intron | 10.0% |
| !! | TTAAAAGAAAATTAAAATAG+GGG | + | chr5.4:14081049-14081068 | MS.gene59495:intron | 10.0% |
| !! | TTACTGTTTATTATATTATT+TGG | + | chr5.4:14081498-14081517 | MS.gene59495:intron | 10.0% |
| !!! | TTTTAAAAACATATATAAGT+AGG | - | chr5.4:14083047-14083066 | None:intergenic | 10.0% |
| !! | AATACAAAATTCAATGAATA+TGG | - | chr5.4:14080568-14080587 | None:intergenic | 15.0% |
| !!! | GATATTATTGAAGATATTTT+AGG | + | chr5.4:14079304-14079323 | MS.gene59495:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAAGTTG+TGG | + | chr5.4:14079760-14079779 | MS.gene59495:intron | 15.0% |
| !! | AAACTATGATGATTATGAAA+AGG | - | chr5.4:14079742-14079761 | None:intergenic | 20.0% |
| !! | AAATATGTAACATGATGATT+AGG | + | chr5.4:14079785-14079804 | MS.gene59495:intron | 20.0% |
| !! | AAATTCAATGAATATGGAAA+AGG | - | chr5.4:14080562-14080581 | None:intergenic | 20.0% |
| !! | AATATGTAACATGATGATTA+GGG | + | chr5.4:14079786-14079805 | MS.gene59495:intron | 20.0% |
| !! | AATTCAATGAATATGGAAAA+GGG | - | chr5.4:14080561-14080580 | None:intergenic | 20.0% |
| !! | ATAGTCAATTTAATCAAACA+TGG | + | chr5.4:14081716-14081735 | MS.gene59495:intron | 20.0% |
| !! | ATCACATTAATTAAGAAAGT+TGG | + | chr5.4:14079483-14079502 | MS.gene59495:intron | 20.0% |
| !! | GACTAAAAGTTCATTTATAT+TGG | + | chr5.4:14083565-14083584 | MS.gene59495:intron | 20.0% |
| !! | GTATGAAATATTTATAACCT+AGG | + | chr5.4:14081563-14081582 | MS.gene59495:intron | 20.0% |
| !! | TAATACTAATCATCAAACAT+AGG | - | chr5.4:14079184-14079203 | None:intergenic | 20.0% |
| !! | TATCTTCAATAATATCTACA+TGG | - | chr5.4:14079300-14079319 | None:intergenic | 20.0% |
| !! | TTCATTTATATTGGTATATC+AGG | + | chr5.4:14083574-14083593 | MS.gene59495:intron | 20.0% |
| !!! | AAATCTATCTTTTGAAAAAG+GGG | - | chr5.4:14082560-14082579 | None:intergenic | 20.0% |
| !!! | ACGTTCTCAATTTTTAATTA+AGG | + | chr5.4:14079231-14079250 | MS.gene59495:intron | 20.0% |
| !!! | AGAAATCTATCTTTTGAAAA+AGG | - | chr5.4:14082562-14082581 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTATTCTAACATT+TGG | - | chr5.4:14082924-14082943 | None:intergenic | 20.0% |
| !!! | GAAATCTATCTTTTGAAAAA+GGG | - | chr5.4:14082561-14082580 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATTATGTTTGT+AGG | + | chr5.4:14080576-14080595 | MS.gene59495:intron | 20.0% |
| !!! | GATTTAAGTTGTATACTTTT+AGG | + | chr5.4:14079253-14079272 | MS.gene59495:intron | 20.0% |
| !!! | GTAAAAGCAATTTTATTGAT+GGG | + | chr5.4:14081768-14081787 | MS.gene59495:intron | 20.0% |
| !!! | TCTTTATTTTGTGTTTGAAT+TGG | + | chr5.4:14080202-14080221 | MS.gene59495:intron | 20.0% |
| !!! | TGTAAAAGCAATTTTATTGA+TGG | + | chr5.4:14081767-14081786 | MS.gene59495:intron | 20.0% |
| !!! | TTCCAACTTTTACAAATTAT+CGG | + | chr5.4:14081329-14081348 | MS.gene59495:intron | 20.0% |
| ! | AAAGACAATATAACACGAAA+TGG | - | chr5.4:14083004-14083023 | None:intergenic | 25.0% |
| ! | AAGACAATATAACACGAAAT+GGG | - | chr5.4:14083003-14083022 | None:intergenic | 25.0% |
| ! | AGATAGACAAACAAGAAATA+CGG | - | chr5.4:14081261-14081280 | None:intergenic | 25.0% |
| ! | ATATGTAACATGATGATTAG+GGG | + | chr5.4:14079787-14079806 | MS.gene59495:intron | 25.0% |
| ! | CAAACAAGGTTCTATATTTA+GGG | - | chr5.4:14079458-14079477 | None:intergenic | 25.0% |
| ! | GTATTATACAATTTACGTAG+TGG | + | chr5.4:14079916-14079935 | MS.gene59495:intron | 25.0% |
| ! | TAATGTGATTTAGTCAAACA+AGG | - | chr5.4:14079472-14079491 | None:intergenic | 25.0% |
| ! | TACACAGTTACATATTACTT+GGG | + | chr5.4:14080898-14080917 | MS.gene59495:intron | 25.0% |
| ! | TAGTTTCTATTGCCTAAAAA+AGG | - | chr5.4:14083207-14083226 | None:intergenic | 25.0% |
| ! | TCAAACAAGGTTCTATATTT+AGG | - | chr5.4:14079459-14079478 | None:intergenic | 25.0% |
| ! | TTACACAGTTACATATTACT+TGG | + | chr5.4:14080897-14080916 | MS.gene59495:intron | 25.0% |
| ! | TTCATACATCAAGAAAGAAA+AGG | - | chr5.4:14081550-14081569 | None:intergenic | 25.0% |
| ! | TTGCAGAAGTTATAAAGTAT+GGG | + | chr5.4:14080740-14080759 | MS.gene59495:CDS | 25.0% |
| ! | TTTGCAGAAGTTATAAAGTA+TGG | + | chr5.4:14080739-14080758 | MS.gene59495:CDS | 25.0% |
| ! | TTTGTGTTTATTTACACTCT+TGG | + | chr5.4:14080228-14080247 | MS.gene59495:intron | 25.0% |
| !! | AATTTTATGTCAATGTTCAC+AGG | + | chr5.4:14083343-14083362 | MS.gene59495:intron | 25.0% |
| !! | AGAGTAATAGAGCATTATAA+AGG | - | chr5.4:14081310-14081329 | None:intergenic | 25.0% |
| !! | ATTTATCTTTTATCTCTGGT+AGG | - | chr5.4:14081863-14081882 | None:intergenic | 25.0% |
| !!! | AGTTAGTGACATTTTAAAAC+AGG | + | chr5.4:14083424-14083443 | MS.gene59495:CDS | 25.0% |
| !!! | CTTTTAAAAAACTGTAGTAG+TGG | - | chr5.4:14081036-14081055 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTTCTTTCTCA+TGG | + | chr5.4:14083179-14083198 | MS.gene59495:intron | 25.0% |
| !!! | TAACAAGTTTTCAAGAGAAT+TGG | + | chr5.4:14079545-14079564 | MS.gene59495:intron | 25.0% |
| !!! | TACATTTGTTTCTATTCTGA+GGG | + | chr5.4:14083319-14083338 | MS.gene59495:intron | 25.0% |
| AAACAGTAAAACTACTCACA+TGG | - | chr5.4:14081487-14081506 | None:intergenic | 30.0% | |
| AAATCAACGTTAACAATGGT+GGG | - | chr5.4:14079036-14079055 | None:intergenic | 30.0% | |
| AGAAGGATAAATCAGAAGTT+AGG | - | chr5.4:14082490-14082509 | None:intergenic | 30.0% | |
| AGAATTAGTTACAATTGGTG+AGG | - | chr5.4:14081988-14082007 | None:intergenic | 30.0% | |
| AGACAATATAACACGAAATG+GGG | - | chr5.4:14083002-14083021 | None:intergenic | 30.0% | |
| AGATACTACGAAAATGGTAT+AGG | - | chr5.4:14081214-14081233 | None:intergenic | 30.0% | |
| AGGGAAGAATTAGTTACAAT+TGG | - | chr5.4:14081993-14082012 | None:intergenic | 30.0% | |
| AGTAGGACACTATACAATTA+GGG | - | chr5.4:14079955-14079974 | None:intergenic | 30.0% | |
| ATAAACCTGAACTTCTTCAA+AGG | + | chr5.4:14079100-14079119 | MS.gene59495:CDS | 30.0% | |
| ATAAGTAGGCTGAGAAATTA+TGG | - | chr5.4:14083033-14083052 | None:intergenic | 30.0% | |
| ATGCTCCAAATGTTAGAATA+AGG | + | chr5.4:14082916-14082935 | MS.gene59495:intron | 30.0% | |
| ATGGTCAGCATATTAAACAA+TGG | - | chr5.4:14082240-14082259 | None:intergenic | 30.0% | |
| ATGTAACTGTGTAACATACA+TGG | - | chr5.4:14080891-14080910 | None:intergenic | 30.0% | |
| ATGTACAGATACTACGAAAA+TGG | - | chr5.4:14081220-14081239 | None:intergenic | 30.0% | |
| ATTAGATACATTACCAGAGA+GGG | + | chr5.4:14080702-14080721 | MS.gene59495:CDS | 30.0% | |
| CATGTAATGTGAAGTCAAAA+AGG | - | chr5.4:14080962-14080981 | None:intergenic | 30.0% | |
| CCAAGAAAAGGAATAACAAA+GGG | + | chr5.4:14081816-14081835 | MS.gene59495:intron | 30.0% | |
| CCATATATCTCAGCTTAAAA+AGG | - | chr5.4:14082371-14082390 | None:intergenic | 30.0% | |
| CTCAGAATAGAAACAAATGT+AGG | - | chr5.4:14083320-14083339 | None:intergenic | 30.0% | |
| GAAAAATATGCAGGCATTAA+TGG | + | chr5.4:14080798-14080817 | MS.gene59495:CDS | 30.0% | |
| GAAGGATAAATCAGAAGTTA+GGG | - | chr5.4:14082489-14082508 | None:intergenic | 30.0% | |
| GAATAAAATTAACACCACGT+AGG | - | chr5.4:14080410-14080429 | None:intergenic | 30.0% | |
| GACATACAAATGTATAACCT+AGG | - | chr5.4:14081583-14081602 | None:intergenic | 30.0% | |
| GCTCATTGAAATCGTAAAAT+CGG | + | chr5.4:14082860-14082879 | MS.gene59495:intron | 30.0% | |
| GCTTAAACAACATTCATTGA+AGG | - | chr5.4:14082623-14082642 | None:intergenic | 30.0% | |
| TAAGTAGGCTGAGAAATTAT+GGG | - | chr5.4:14083032-14083051 | None:intergenic | 30.0% | |
| TACGAAAATGGTATAGGTTT+AGG | - | chr5.4:14081208-14081227 | None:intergenic | 30.0% | |
| TATAAAGTATGGGCTCATTA+GGG | + | chr5.4:14080750-14080769 | MS.gene59495:CDS | 30.0% | |
| TATAAATTACAACTGCCTGA+GGG | - | chr5.4:14082415-14082434 | None:intergenic | 30.0% | |
| TATAATAATAGGCATGTCCA+TGG | + | chr5.4:14080035-14080054 | MS.gene59495:intron | 30.0% | |
| TCAGCATATTAAACAATGGA+TGG | - | chr5.4:14082236-14082255 | None:intergenic | 30.0% | |
| TCTACATGGTGCAATTTAAT+TGG | - | chr5.4:14079286-14079305 | None:intergenic | 30.0% | |
| TTATAAAGTATGGGCTCATT+AGG | + | chr5.4:14080749-14080768 | MS.gene59495:CDS | 30.0% | |
| TTGAATTTGGGTCATACATT+TGG | + | chr5.4:14081461-14081480 | MS.gene59495:CDS | 30.0% | |
| TTGAGACTTATCCTTCTAAA+AGG | + | chr5.4:14083623-14083642 | MS.gene59495:CDS | 30.0% | |
| ! | AAATTGCTACTTAAAGCGAA+AGG | - | chr5.4:14079719-14079738 | None:intergenic | 30.0% |
| ! | AAGATAGATTTCTCCTTTTC+CGG | + | chr5.4:14082569-14082588 | MS.gene59495:intron | 30.0% |
| ! | AATTACCTTTGAAGAAGTTC+AGG | - | chr5.4:14079108-14079127 | None:intergenic | 30.0% |
| ! | ACTCAAAGTAAGATTTTACC+TGG | - | chr5.4:14080824-14080843 | None:intergenic | 30.0% |
| ! | GGAGATTTATCTTTTATCTC+TGG | - | chr5.4:14081867-14081886 | None:intergenic | 30.0% |
| ! | GTGAGGATTATTCATGTTTT+GGG | - | chr5.4:14081905-14081924 | None:intergenic | 30.0% |
| ! | TAGAGCATTATAAAGGCAAT+TGG | - | chr5.4:14081303-14081322 | None:intergenic | 30.0% |
| ! | TGCCGATAATTTGTAAAAGT+TGG | - | chr5.4:14081334-14081353 | None:intergenic | 30.0% |
| ! | TGTGAGGATTATTCATGTTT+TGG | - | chr5.4:14081906-14081925 | None:intergenic | 30.0% |
| ! | TTACTTGGGAAATGTACTTT+TGG | + | chr5.4:14080912-14080931 | MS.gene59495:intron | 30.0% |
| !! | ACCATTGTTAACGTTGATTT+GGG | + | chr5.4:14079036-14079055 | MS.gene59495:CDS | 30.0% |
| !! | ATCTTTTGAAAAAGGGGAAT+GGG | - | chr5.4:14082554-14082573 | None:intergenic | 30.0% |
| !! | CCTTTTTAAGCTGAGATATA+TGG | + | chr5.4:14082368-14082387 | MS.gene59495:intron | 30.0% |
| !! | CTACATTTGTTTCTATTCTG+AGG | + | chr5.4:14083318-14083337 | MS.gene59495:intron | 30.0% |
| !! | GCGATTTTTGGATTTACATT+GGG | + | chr5.4:14082882-14082901 | MS.gene59495:intron | 30.0% |
| !! | TATCTTTTGAAAAAGGGGAA+TGG | - | chr5.4:14082555-14082574 | None:intergenic | 30.0% |
| !! | TCTTATGAAAGTGTTTGACA+AGG | + | chr5.4:14080293-14080312 | MS.gene59495:CDS | 30.0% |
| !! | TGTTGAGAGTGTAATTTTAC+CGG | + | chr5.4:14080151-14080170 | MS.gene59495:CDS | 30.0% |
| !! | TTAACGTTGATTTGGGTAAT+CGG | + | chr5.4:14079043-14079062 | MS.gene59495:CDS | 30.0% |
| !!! | ACACCTTTTGAAACTGTTTA+TGG | - | chr5.4:14082708-14082727 | None:intergenic | 30.0% |
| !!! | CACCTTTTGAAACTGTTTAT+GGG | - | chr5.4:14082707-14082726 | None:intergenic | 30.0% |
| !!! | CCTTTGTTATTCCTTTTCTT+GGG | - | chr5.4:14081818-14081837 | None:intergenic | 30.0% |
| !!! | CTTTGTTATTCCTTTTCTTG+GGG | - | chr5.4:14081817-14081836 | None:intergenic | 30.0% |
| AAAGCGATCATGTGAAAACA+AGG | + | chr5.4:14081391-14081410 | MS.gene59495:CDS | 35.0% | |
| AAGTAGGCTGAGAAATTATG+GGG | - | chr5.4:14083031-14083050 | None:intergenic | 35.0% | |
| ACAACCTTGTCTAGATACAA+AGG | - | chr5.4:14080098-14080117 | None:intergenic | 35.0% | |
| ACACTCTCAACAGAAACATT+TGG | - | chr5.4:14080143-14080162 | None:intergenic | 35.0% | |
| ACATGGAAGAAGCTAGTAAT+AGG | - | chr5.4:14080874-14080893 | None:intergenic | 35.0% | |
| ACCCAAATCAACGTTAACAA+TGG | - | chr5.4:14079040-14079059 | None:intergenic | 35.0% | |
| AGACGAGAAAAAATCTCAAG+AGG | + | chr5.4:14079869-14079888 | MS.gene59495:intron | 35.0% | |
| AGCTGAGATATATGGAAAAC+CGG | + | chr5.4:14082376-14082395 | MS.gene59495:intron | 35.0% | |
| ATACAATTAGGGATGGCAAA+AGG | - | chr5.4:14079944-14079963 | None:intergenic | 35.0% | |
| ATCATGAGGTAGTTTCTTGT+GGG | + | chr5.4:14079647-14079666 | MS.gene59495:intron | 35.0% | |
| ATGTCAATGTTCACAGGTAA+TGG | + | chr5.4:14083349-14083368 | MS.gene59495:intron | 35.0% | |
| ATTAGTTACAATTGGTGAGG+TGG | - | chr5.4:14081985-14082004 | None:intergenic | 35.0% | |
| ATTCTATGCACAATCTGGAT+CGG | + | chr5.4:14082833-14082852 | MS.gene59495:intron | 35.0% | |
| CAAATCAACGTTAACAATGG+TGG | - | chr5.4:14079037-14079056 | None:intergenic | 35.0% | |
| CAAGGTTCTATATTTAGGGA+TGG | - | chr5.4:14079454-14079473 | None:intergenic | 35.0% | |
| CACTCTCAACAGAAACATTT+GGG | - | chr5.4:14080142-14080161 | None:intergenic | 35.0% | |
| CATGTTTAAATCTGTCATGG+CGG | + | chr5.4:14083487-14083506 | MS.gene59495:CDS | 35.0% | |
| CATTAGATACATTACCAGAG+AGG | + | chr5.4:14080701-14080720 | MS.gene59495:CDS | 35.0% | |
| CATTGTAATGCCACTCTTAT+AGG | - | chr5.4:14079336-14079355 | None:intergenic | 35.0% | |
| CCCAAGAAAAGGAATAACAA+AGG | + | chr5.4:14081815-14081834 | MS.gene59495:intron | 35.0% | |
| CCTTATTGTCACTAACACTA+CGG | + | chr5.4:14080067-14080086 | MS.gene59495:CDS | 35.0% | |
| CTCAGCTTAAAAAGGCTATA+GGG | - | chr5.4:14082363-14082382 | None:intergenic | 35.0% | |
| CTCCCATAAACAGTTTCAAA+AGG | + | chr5.4:14082702-14082721 | MS.gene59495:intron | 35.0% | |
| CTGATTTATCCTTCTTGCTA+TGG | + | chr5.4:14082495-14082514 | MS.gene59495:intron | 35.0% | |
| GAGTAGGACACTATACAATT+AGG | - | chr5.4:14079956-14079975 | None:intergenic | 35.0% | |
| GGACATGTTTAAATCTGTCA+TGG | + | chr5.4:14083484-14083503 | MS.gene59495:CDS | 35.0% | |
| GTAAAAAAGCTTTACACCGA+CGG | + | chr5.4:14079376-14079395 | MS.gene59495:intron | 35.0% | |
| GTATAAATTACAACTGCCTG+AGG | - | chr5.4:14082416-14082435 | None:intergenic | 35.0% | |
| GTGCATGTTTGTAATTGAGT+AGG | - | chr5.4:14079972-14079991 | None:intergenic | 35.0% | |
| GTTGTTGATGCTTTAACAAG+TGG | + | chr5.4:14080113-14080132 | MS.gene59495:CDS | 35.0% | |
| TATCATAGACTTGAACCATC+AGG | - | chr5.4:14080528-14080547 | None:intergenic | 35.0% | |
| TATCCCATTTATATCGGATC+CGG | + | chr5.4:14079069-14079088 | MS.gene59495:CDS | 35.0% | |
| TCAAGAGGCTCAGATATTTA+GGG | + | chr5.4:14079884-14079903 | MS.gene59495:intron | 35.0% | |
| TCTCAGCTTAAAAAGGCTAT+AGG | - | chr5.4:14082364-14082383 | None:intergenic | 35.0% | |
| TGATTGCTTGTTCAACTGAT+AGG | + | chr5.4:14080266-14080285 | MS.gene59495:intron | 35.0% | |
| TGTGTTTCGTGAACTATTCA+TGG | - | chr5.4:14079586-14079605 | None:intergenic | 35.0% | |
| TTAAACAATGGATGGTGAAG+TGG | - | chr5.4:14082228-14082247 | None:intergenic | 35.0% | |
| ! | ATCCTTCTAAAAGGTTCTCT+AGG | + | chr5.4:14083632-14083651 | MS.gene59495:CDS | 35.0% |
| ! | ATCGTAAAATCGGCGATTTT+TGG | + | chr5.4:14082870-14082889 | MS.gene59495:intron | 35.0% |
| ! | ATGTTGTTTAAGCTGTCTCA+AGG | + | chr5.4:14082630-14082649 | MS.gene59495:intron | 35.0% |
| ! | CAATTGACTTTGTTGCTGTT+CGG | + | chr5.4:14079612-14079631 | MS.gene59495:intron | 35.0% |
| ! | CACCATTGTTAACGTTGATT+TGG | + | chr5.4:14079035-14079054 | MS.gene59495:CDS | 35.0% |
| ! | CTATGAAAAAGTATGCTGAC+CGG | - | chr5.4:14082591-14082610 | None:intergenic | 35.0% |
| ! | TAGAGGAGAGAGTATGTAAT+GGG | - | chr5.4:14081941-14081960 | None:intergenic | 35.0% |
| ! | TCTAGGAAATTGCGTTTTCA+CGG | + | chr5.4:14083649-14083668 | MS.gene59495:CDS | 35.0% |
| ! | TTAGAGGAGAGAGTATGTAA+TGG | - | chr5.4:14081942-14081961 | None:intergenic | 35.0% |
| ! | TTCCTAGAGAACCTTTTAGA+AGG | - | chr5.4:14083637-14083656 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTTAGTTGACA+GGG | - | chr5.4:14082662-14082681 | None:intergenic | 35.0% |
| ! | TTTTTGCTGAGTTAGTTGAC+AGG | - | chr5.4:14082663-14082682 | None:intergenic | 35.0% |
| !! | AATGTACTTTTGGCTGGAAA+AGG | + | chr5.4:14080922-14080941 | MS.gene59495:intron | 35.0% |
| !! | GATTAATTTGCATATGCCGT+CGG | - | chr5.4:14079395-14079414 | None:intergenic | 35.0% |
| !! | GGCGATTTTTGGATTTACAT+TGG | + | chr5.4:14082881-14082900 | MS.gene59495:intron | 35.0% |
| !! | GGTATATCAGGTTGATAAGA+AGG | + | chr5.4:14083586-14083605 | MS.gene59495:intron | 35.0% |
| !! | TTGTAGGTTGATTCTTCAGT+TGG | + | chr5.4:14080592-14080611 | MS.gene59495:intron | 35.0% |
| !!! | CATGTTTTGGGATACTTTGT+TGG | - | chr5.4:14081893-14081912 | None:intergenic | 35.0% |
| !!! | CCCTTTGTTATTCCTTTTCT+TGG | - | chr5.4:14081819-14081838 | None:intergenic | 35.0% |
| !!! | CTTTTGAAACTGTTTATGGG+AGG | - | chr5.4:14082704-14082723 | None:intergenic | 35.0% |
| !!! | GGGATACAGAATTTTTTGAG+TGG | + | chr5.4:14080770-14080789 | MS.gene59495:CDS | 35.0% |
| !!! | TTTCTCATGGCACCTTTTTT+AGG | + | chr5.4:14083192-14083211 | MS.gene59495:intron | 35.0% |
| AACCAAAGAATTGGTCGTAC+TGG | - | chr5.4:14082785-14082804 | None:intergenic | 40.0% | |
| AACCCGGATCCGATATAAAT+GGG | - | chr5.4:14079075-14079094 | None:intergenic | 40.0% | |
| AATATCTGCTAGGTGGTTAG+AGG | - | chr5.4:14081958-14081977 | None:intergenic | 40.0% | |
| ACATACACTTTCCAAACAGC+TGG | + | chr5.4:14082034-14082053 | MS.gene59495:intron | 40.0% | |
| ACCAATCAAGTTCTTCCCAA+GGG | - | chr5.4:14080641-14080660 | None:intergenic | 40.0% | |
| ACTTTGCATCCGATTGAGTA+AGG | - | chr5.4:14081184-14081203 | None:intergenic | 40.0% | |
| AGCAGAAGAAGACACTACTT+GGG | - | chr5.4:14082197-14082216 | None:intergenic | 40.0% | |
| AGTAGGCTGAGAAATTATGG+GGG | - | chr5.4:14083030-14083049 | None:intergenic | 40.0% | |
| AGTCAGGGCTACATTGAATT+TGG | + | chr5.4:14081448-14081467 | MS.gene59495:CDS | 40.0% | |
| AGTGTATGTCAGGAAAAGGA+AGG | - | chr5.4:14082023-14082042 | None:intergenic | 40.0% | |
| AGTTTCTTGTGGGTGATACA+TGG | + | chr5.4:14079657-14079676 | MS.gene59495:intron | 40.0% | |
| ATAGCATATGCCAGTGCATT+AGG | - | chr5.4:14081371-14081390 | None:intergenic | 40.0% | |
| ATCCAGTACGACCAATTCTT+TGG | + | chr5.4:14082780-14082799 | MS.gene59495:intron | 40.0% | |
| ATCCCATTTATATCGGATCC+GGG | + | chr5.4:14079070-14079089 | MS.gene59495:CDS | 40.0% | |
| ATGTCCACAGTCATCATTTC+AGG | - | chr5.4:14083470-14083489 | None:intergenic | 40.0% | |
| CAATAAGGACCTTCTTTCCA+TGG | - | chr5.4:14080055-14080074 | None:intergenic | 40.0% | |
| CATGGAAATTGAGCTATGAC+AGG | - | chr5.4:14081154-14081173 | None:intergenic | 40.0% | |
| CCGTAGTGTTAGTGACAATA+AGG | - | chr5.4:14080070-14080089 | None:intergenic | 40.0% | |
| CGAACAGCAACAAAGTCAAT+TGG | - | chr5.4:14079614-14079633 | None:intergenic | 40.0% | |
| CGATGCAAAACACCTCAAAA+CGG | + | chr5.4:14082809-14082828 | MS.gene59495:intron | 40.0% | |
| CGGAGCTATCCCATTTATAT+CGG | + | chr5.4:14079063-14079082 | MS.gene59495:CDS | 40.0% | |
| CTATAAGCACACATTGAGGT+TGG | - | chr5.4:14080672-14080691 | None:intergenic | 40.0% | |
| CTCAAGAGGCTCAGATATTT+AGG | + | chr5.4:14079883-14079902 | MS.gene59495:intron | 40.0% | |
| CTTTGCATCCGATTGAGTAA+GGG | - | chr5.4:14081183-14081202 | None:intergenic | 40.0% | |
| GATCATGAGGTAGTTTCTTG+TGG | + | chr5.4:14079646-14079665 | MS.gene59495:intron | 40.0% | |
| GATGCAAAACACCTCAAAAC+GGG | + | chr5.4:14082810-14082829 | MS.gene59495:intron | 40.0% | |
| GCTGAGATATATGGAAAACC+GGG | + | chr5.4:14082377-14082396 | MS.gene59495:intron | 40.0% | |
| GGACACTATACAATTAGGGA+TGG | - | chr5.4:14079951-14079970 | None:intergenic | 40.0% | |
| GTCAGGGCTACATTGAATTT+GGG | + | chr5.4:14081449-14081468 | MS.gene59495:CDS | 40.0% | |
| GTGGCAAGAGAAAAATATGC+AGG | + | chr5.4:14080789-14080808 | MS.gene59495:CDS | 40.0% | |
| GTGTATGTCAGGAAAAGGAA+GGG | - | chr5.4:14082022-14082041 | None:intergenic | 40.0% | |
| GTGTCTATAAGCACACATTG+AGG | - | chr5.4:14080676-14080695 | None:intergenic | 40.0% | |
| GTTTCTTGTGGGTGATACAT+GGG | + | chr5.4:14079658-14079677 | MS.gene59495:intron | 40.0% | |
| TAAATCAGAAGTTAGGGCTC+AGG | - | chr5.4:14082483-14082502 | None:intergenic | 40.0% | |
| TAGAATCATCAATCCAACCG+AGG | - | chr5.4:14083394-14083413 | None:intergenic | 40.0% | |
| TAGGAAGTAGCCTATAAGAG+TGG | + | chr5.4:14079323-14079342 | MS.gene59495:intron | 40.0% | |
| TAGGCAATAGAAACTAGCGT+TGG | + | chr5.4:14083211-14083230 | MS.gene59495:intron | 40.0% | |
| TCAGATTCCAACCACTGTTA+TGG | + | chr5.4:14080428-14080447 | MS.gene59495:CDS | 40.0% | |
| TCCAGACTTTCATGTGGATA+CGG | - | chr5.4:14082077-14082096 | None:intergenic | 40.0% | |
| TGCACCTTTGTATCTAGACA+AGG | + | chr5.4:14080091-14080110 | MS.gene59495:CDS | 40.0% | |
| TGTATGTCAGGAAAAGGAAG+GGG | - | chr5.4:14082021-14082040 | None:intergenic | 40.0% | |
| TTAAATCTGTCATGGCGGTA+TGG | + | chr5.4:14083492-14083511 | MS.gene59495:intron | 40.0% | |
| TTTCTTGTGGGTGATACATG+GGG | + | chr5.4:14079659-14079678 | MS.gene59495:intron | 40.0% | |
| ! | AAAAGTATGCTGACCGGAAA+AGG | - | chr5.4:14082585-14082604 | None:intergenic | 40.0% |
| ! | AGAGGAGAGAGTATGTAATG+GGG | - | chr5.4:14081940-14081959 | None:intergenic | 40.0% |
| ! | AGAGTATGTAATGGGGTGAT+GGG | - | chr5.4:14081933-14081952 | None:intergenic | 40.0% |
| ! | AGGTTGGATTTTTGCTGGAA+AGG | - | chr5.4:14079007-14079026 | None:intergenic | 40.0% |
| ! | ATCATTTCAGGAGGCACAAT+TGG | - | chr5.4:14083458-14083477 | None:intergenic | 40.0% |
| ! | CTAGGAAATTGCGTTTTCAC+GGG | + | chr5.4:14083650-14083669 | MS.gene59495:CDS | 40.0% |
| ! | CTGTTTGGAAAGTGTATGTC+AGG | - | chr5.4:14082033-14082052 | None:intergenic | 40.0% |
| ! | GGAAAGTGTATGTCAGGAAA+AGG | - | chr5.4:14082027-14082046 | None:intergenic | 40.0% |
| ! | GGGAAATTGACTTTGCAACA+AGG | + | chr5.4:14082162-14082181 | MS.gene59495:intron | 40.0% |
| ! | GGTTGGATTTTTGCTGGAAA+GGG | - | chr5.4:14079006-14079025 | None:intergenic | 40.0% |
| ! | GTTGATAAGAAGGTAGCAGA+TGG | + | chr5.4:14083596-14083615 | MS.gene59495:CDS | 40.0% |
| ! | GTTGGATTTTTGCTGGAAAG+GGG | - | chr5.4:14079005-14079024 | None:intergenic | 40.0% |
| ! | TTAACAATGGTGGGAACATC+AGG | - | chr5.4:14079027-14079046 | None:intergenic | 40.0% |
| ! | TTCAGGTTTATTGAGCAACC+CGG | - | chr5.4:14079091-14079110 | None:intergenic | 40.0% |
| ! | TTGGGAAATGTACTTTTGGC+TGG | + | chr5.4:14080916-14080935 | MS.gene59495:intron | 40.0% |
| ! | TTTGGGATACTTTGTTGGCT+AGG | - | chr5.4:14081888-14081907 | None:intergenic | 40.0% |
| !! | ATAGAAACTAGCGTTGGCTA+TGG | + | chr5.4:14083217-14083236 | MS.gene59495:CDS | 40.0% |
| !! | GAGAGTGTAATTTTACCGGA+TGG | + | chr5.4:14080155-14080174 | MS.gene59495:CDS | 40.0% |
| !! | GGAGTATTGATAGGACTCAT+GGG | - | chr5.4:14082105-14082124 | None:intergenic | 40.0% |
| !! | TAGAAACTAGCGTTGGCTAT+GGG | + | chr5.4:14083218-14083237 | MS.gene59495:CDS | 40.0% |
| !! | TAGGTTGATTCTTCAGTTGG+TGG | + | chr5.4:14080595-14080614 | MS.gene59495:intron | 40.0% |
| !! | TGAACAGTTGTTGGCTTCAA+GGG | - | chr5.4:14082275-14082294 | None:intergenic | 40.0% |
| !!! | ACATCAGGTTGGATTTTTGC+TGG | - | chr5.4:14079012-14079031 | None:intergenic | 40.0% |
| !!! | CGTTTTGAGGTGTTTTGCAT+CGG | - | chr5.4:14082811-14082830 | None:intergenic | 40.0% |
| AACACCACGTAGGAATGAAG+CGG | - | chr5.4:14080400-14080419 | None:intergenic | 45.0% | |
| AAGTTAGGGCTCAGGTTCTT+CGG | - | chr5.4:14082475-14082494 | None:intergenic | 45.0% | |
| AATCATCAATCCAACCGAGG+CGG | - | chr5.4:14083391-14083410 | None:intergenic | 45.0% | |
| ACGGGATTCTATGCACAATC+TGG | + | chr5.4:14082828-14082847 | MS.gene59495:intron | 45.0% | |
| ACTGGTATAAACCATCCCCT+TGG | + | chr5.4:14080622-14080641 | MS.gene59495:CDS | 45.0% | |
| AGCAAAAACAGCCTCAACTC+AGG | + | chr5.4:14082675-14082694 | MS.gene59495:intron | 45.0% | |
| AGGCTCAGATATTTAGGGAC+AGG | + | chr5.4:14079889-14079908 | MS.gene59495:intron | 45.0% | |
| AGGTGGCATGAATATCTGCT+AGG | - | chr5.4:14081968-14081987 | None:intergenic | 45.0% | |
| ATATGCAGGCATTAATGGCC+AGG | + | chr5.4:14080803-14080822 | MS.gene59495:CDS | 45.0% | |
| ATCATGTGAAAACAAGGCCG+AGG | + | chr5.4:14081397-14081416 | MS.gene59495:CDS | 45.0% | |
| ATTCTTTCCACCACCGGAAA+AGG | + | chr5.4:14082448-14082467 | MS.gene59495:intron | 45.0% | |
| ATTGGTCGTACTGGATTCCA+TGG | - | chr5.4:14082776-14082795 | None:intergenic | 45.0% | |
| ATTTCCCAATCTGAGCCTTG+AGG | - | chr5.4:14082149-14082168 | None:intergenic | 45.0% | |
| CAACCCGGATCCGATATAAA+TGG | - | chr5.4:14079076-14079095 | None:intergenic | 45.0% | |
| CAATGGATGGTGAAGTGGAA+AGG | - | chr5.4:14082223-14082242 | None:intergenic | 45.0% | |
| CACCAATCAAGTTCTTCCCA+AGG | - | chr5.4:14080642-14080661 | None:intergenic | 45.0% | |
| CACGGGAGAATATGACAGAA+AGG | + | chr5.4:14083667-14083686 | MS.gene59495:CDS | 45.0% | |
| CATCGGAGCAACCAAAGAAT+TGG | - | chr5.4:14082794-14082813 | None:intergenic | 45.0% | |
| CCAATCAAGTTCTTCCCAAG+GGG | - | chr5.4:14080640-14080659 | None:intergenic | 45.0% | |
| CCAGACTTTCATGTGGATAC+GGG | - | chr5.4:14082076-14082095 | None:intergenic | 45.0% | |
| CCATTGAGTCTCGATTGGAT+CGG | + | chr5.4:14080316-14080335 | MS.gene59495:CDS | 45.0% | |
| CTGGTATAAACCATCCCCTT+GGG | + | chr5.4:14080623-14080642 | MS.gene59495:CDS | 45.0% | |
| CTTGAAGCCAACAACTGTTC+AGG | + | chr5.4:14082274-14082293 | MS.gene59495:intron | 45.0% | |
| GAGCAGAAGAAGACACTACT+TGG | - | chr5.4:14082198-14082217 | None:intergenic | 45.0% | |
| GATATCGTGATGTTTACGCG+AGG | + | chr5.4:14079690-14079709 | MS.gene59495:intron | 45.0% | |
| GATCCTATTCTTTCCACCAC+CGG | + | chr5.4:14082442-14082461 | MS.gene59495:intron | 45.0% | |
| GGAATAAACGCGAGATCATG+AGG | + | chr5.4:14079633-14079652 | MS.gene59495:intron | 45.0% | |
| GTATGTCAGGAAAAGGAAGG+GGG | - | chr5.4:14082020-14082039 | None:intergenic | 45.0% | |
| GTGCATTAGGATCTCTGCAA+TGG | - | chr5.4:14081358-14081377 | None:intergenic | 45.0% | |
| TAAGACCTGTGCCATAACAG+TGG | - | chr5.4:14080442-14080461 | None:intergenic | 45.0% | |
| TACATTACCAGAGAGGGAAC+TGG | + | chr5.4:14080708-14080727 | MS.gene59495:CDS | 45.0% | |
| TAGGCATGTCCATGGAAAGA+AGG | + | chr5.4:14080043-14080062 | MS.gene59495:intron | 45.0% | |
| TATGCGCTGTGTTATCCTGA+TGG | + | chr5.4:14080510-14080529 | MS.gene59495:intron | 45.0% | |
| TATGTCAGGAAAAGGAAGGG+GGG | - | chr5.4:14082019-14082038 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCGTAAAGGA+TGG | - | chr5.4:14082259-14082278 | None:intergenic | 45.0% | |
| TCCACAGTCATCATTTCAGG+AGG | - | chr5.4:14083467-14083486 | None:intergenic | 45.0% | |
| TCCACATGAAAGTCTGGATC+AGG | + | chr5.4:14082079-14082098 | MS.gene59495:intron | 45.0% | |
| TGGCATGAATATCTGCTAGG+TGG | - | chr5.4:14081965-14081984 | None:intergenic | 45.0% | |
| TGTGTGCTCCCTTACTCAAT+CGG | + | chr5.4:14081172-14081191 | MS.gene59495:intron | 45.0% | |
| TTCTTTCCACCACCGGAAAA+GGG | + | chr5.4:14082449-14082468 | MS.gene59495:intron | 45.0% | |
| TTGCAGAGATCCTAATGCAC+TGG | + | chr5.4:14081358-14081377 | MS.gene59495:intron | 45.0% | |
| TTGGTCGTACTGGATTCCAT+GGG | - | chr5.4:14082775-14082794 | None:intergenic | 45.0% | |
| TTGTACCACAATTCTGCCCA+TGG | + | chr5.4:14082756-14082775 | MS.gene59495:intron | 45.0% | |
| TTGTCCTCAAGGCTCAGATT+GGG | + | chr5.4:14082142-14082161 | MS.gene59495:intron | 45.0% | |
| ! | ACAACATTCATTGAAGGCGC+AGG | - | chr5.4:14082617-14082636 | None:intergenic | 45.0% |
| ! | ATTGAGTAAGGGAGCACACA+TGG | - | chr5.4:14081172-14081191 | None:intergenic | 45.0% |
| ! | CGCTCTTTTACCCCAAGAAA+AGG | + | chr5.4:14081804-14081823 | MS.gene59495:intron | 45.0% |
| ! | GAGAGTATGTAATGGGGTGA+TGG | - | chr5.4:14081934-14081953 | None:intergenic | 45.0% |
| ! | GAGTATGTAATGGGGTGATG+GGG | - | chr5.4:14081932-14081951 | None:intergenic | 45.0% |
| ! | GTGCATAGAATCCCGTTTTG+AGG | - | chr5.4:14082824-14082843 | None:intergenic | 45.0% |
| !! | ACCACTTTTCATGCTTCGAC+GGG | - | chr5.4:14082735-14082754 | None:intergenic | 45.0% |
| !! | CACCACTTTTCATGCTTCGA+CGG | - | chr5.4:14082736-14082755 | None:intergenic | 45.0% |
| !! | CTGAACAGTTGTTGGCTTCA+AGG | - | chr5.4:14082276-14082295 | None:intergenic | 45.0% |
| !! | GGGAGTATTGATAGGACTCA+TGG | - | chr5.4:14082106-14082125 | None:intergenic | 45.0% |
| !! | TCTTCAGTTGGTGGCAAAAC+TGG | + | chr5.4:14080604-14080623 | MS.gene59495:CDS | 45.0% |
| !! | TGGAAAAGGCATCTCTAGCT+TGG | + | chr5.4:14080936-14080955 | MS.gene59495:intron | 45.0% |
| !! | TTCTTGCTATGGTTTGCTGC+CGG | + | chr5.4:14082506-14082525 | MS.gene59495:intron | 45.0% |
| !! | TTTCCGGTGGTGGAAAGAAT+AGG | - | chr5.4:14082448-14082467 | None:intergenic | 45.0% |
| !! | TTTAAAAGAAAATTAAAATA+GGG | + | chr5.4:14081048-14081067 | MS.gene59495:intron | 5.0% |
| !!! | TTTTAAAAGAAAATTAAAAT+AGG | + | chr5.4:14081047-14081066 | MS.gene59495:intron | 5.0% |
| AACAGACTTGCCAGAAGGGT+TGG | - | chr5.4:14082326-14082345 | None:intergenic | 50.0% | |
| ACCTGTGCCATAACAGTGGT+TGG | - | chr5.4:14080438-14080457 | None:intergenic | 50.0% | |
| ATGAGAGAGAAGGTGGAGTC+AGG | + | chr5.4:14081432-14081451 | MS.gene59495:CDS | 50.0% | |
| ATGCACAATCTGGATCGGTG+AGG | + | chr5.4:14082838-14082857 | MS.gene59495:intron | 50.0% | |
| ATGGAAAACCGGGTGAACTC+TGG | + | chr5.4:14082387-14082406 | MS.gene59495:intron | 50.0% | |
| ATGGGAGGAAACCTGAGTTG+AGG | - | chr5.4:14082689-14082708 | None:intergenic | 50.0% | |
| CAAGGCCATTGAGTCTCGAT+TGG | + | chr5.4:14080311-14080330 | MS.gene59495:CDS | 50.0% | |
| CCACAACAGACTTGCCAGAA+GGG | - | chr5.4:14082330-14082349 | None:intergenic | 50.0% | |
| CCCCTTGGGAAGAACTTGAT+TGG | + | chr5.4:14080637-14080656 | MS.gene59495:CDS | 50.0% | |
| CCCGTATCCACATGAAAGTC+TGG | + | chr5.4:14082073-14082092 | MS.gene59495:intron | 50.0% | |
| CCGATCCAATCGAGACTCAA+TGG | - | chr5.4:14080319-14080338 | None:intergenic | 50.0% | |
| CGAGGAACCTGAACAGTTGT+TGG | - | chr5.4:14082284-14082303 | None:intergenic | 50.0% | |
| CTCATCCAAGGACACAACCT+CGG | - | chr5.4:14081417-14081436 | None:intergenic | 50.0% | |
| CTGGTAGGAGTCATAGACTC+TGG | - | chr5.4:14081848-14081867 | None:intergenic | 50.0% | |
| CTTGTCCTCAAGGCTCAGAT+TGG | + | chr5.4:14082141-14082160 | MS.gene59495:intron | 50.0% | |
| GCCTCCTGAAATGATGACTG+TGG | + | chr5.4:14083463-14083482 | MS.gene59495:CDS | 50.0% | |
| GCCTGATCCAGACTTTCATG+TGG | - | chr5.4:14082083-14082102 | None:intergenic | 50.0% | |
| GGATTCCATGGGCAGAATTG+TGG | - | chr5.4:14082764-14082783 | None:intergenic | 50.0% | |
| GGCAGCAAACCATAGCAAGA+AGG | - | chr5.4:14082507-14082526 | None:intergenic | 50.0% | |
| GGCTTCAAGGGAAGTCGTAA+AGG | - | chr5.4:14082263-14082282 | None:intergenic | 50.0% | |
| GTGTCCTTGGATGAGAGAGA+AGG | + | chr5.4:14081422-14081441 | MS.gene59495:CDS | 50.0% | |
| GTTGACATGTCATACCGCCT+CGG | + | chr5.4:14083374-14083393 | MS.gene59495:CDS | 50.0% | |
| TCAAGTTCTTCCCAAGGGGA+TGG | - | chr5.4:14080636-14080655 | None:intergenic | 50.0% | |
| TCCAACCACTGTTATGGCAC+AGG | + | chr5.4:14080434-14080453 | MS.gene59495:CDS | 50.0% | |
| TCCACCTTCTCTCTCATCCA+AGG | - | chr5.4:14081429-14081448 | None:intergenic | 50.0% | |
| TCCTTGGATGAGAGAGAAGG+TGG | + | chr5.4:14081425-14081444 | MS.gene59495:CDS | 50.0% | |
| TCCTTGTACTGCTCACCATC+CGG | - | chr5.4:14080173-14080192 | None:intergenic | 50.0% | |
| TGAGAGAGAAGGTGGAGTCA+GGG | + | chr5.4:14081433-14081452 | MS.gene59495:CDS | 50.0% | |
| TGGTGAGCAGTACAAGGACA+TGG | + | chr5.4:14080175-14080194 | MS.gene59495:CDS | 50.0% | |
| TTGAGTCTCGATTGGATCGG+CGG | + | chr5.4:14080319-14080338 | MS.gene59495:CDS | 50.0% | |
| ! | ACTTTTGTTGCCCTTGGAGG+TGG | + | chr5.4:14080345-14080364 | MS.gene59495:CDS | 50.0% |
| ! | AGGAAAAGGAAGGGGGGTAT+AGG | - | chr5.4:14082013-14082032 | None:intergenic | 50.0% |
| ! | CAATGGTGGGAACATCAGGT+TGG | - | chr5.4:14079023-14079042 | None:intergenic | 50.0% |
| ! | CACTTTTCATGCTTCGACGG+GGG | - | chr5.4:14082733-14082752 | None:intergenic | 50.0% |
| ! | GGAAAAGGAAGGGGGGTATA+GGG | - | chr5.4:14082012-14082031 | None:intergenic | 50.0% |
| ! | TCCAAACAGCTGGCCTATGA+GGG | + | chr5.4:14082044-14082063 | MS.gene59495:intron | 50.0% |
| ! | TGCACTTTTGTTGCCCTTGG+AGG | + | chr5.4:14080342-14080361 | MS.gene59495:CDS | 50.0% |
| ! | TTCCAAACAGCTGGCCTATG+AGG | + | chr5.4:14082043-14082062 | MS.gene59495:intron | 50.0% |
| !! | CCACTTTTCATGCTTCGACG+GGG | - | chr5.4:14082734-14082753 | None:intergenic | 50.0% |
| AAGGGTTGGAGGTTGAGCCT+GGG | - | chr5.4:14082312-14082331 | None:intergenic | 55.0% | |
| ACAAGACTGCTTGCGACGGA+GGG | - | chr5.4:14082126-14082145 | None:intergenic | 55.0% | |
| ACATGTCATACCGCCTCGGT+TGG | + | chr5.4:14083378-14083397 | MS.gene59495:CDS | 55.0% | |
| ACCCTCATAGGCCAGCTGTT+TGG | - | chr5.4:14082048-14082067 | None:intergenic | 55.0% | |
| ACCGGATGGTGAGCAGTACA+AGG | + | chr5.4:14080169-14080188 | MS.gene59495:CDS | 55.0% | |
| AGACTTGCCAGAAGGGTTGG+AGG | - | chr5.4:14082323-14082342 | None:intergenic | 55.0% | |
| CAGAGAGGGAACTGGCATCA+GGG | + | chr5.4:14080716-14080735 | MS.gene59495:CDS | 55.0% | |
| CCCCGTCGAAGCATGAAAAG+TGG | + | chr5.4:14082731-14082750 | MS.gene59495:intron | 55.0% | |
| CCCTTCTGGCAAGTCTGTTG+TGG | + | chr5.4:14082327-14082346 | MS.gene59495:intron | 55.0% | |
| CTTTCATGTGGATACGGGCG+TGG | - | chr5.4:14082071-14082090 | None:intergenic | 55.0% | |
| GAGGACAAGACTGCTTGCGA+CGG | - | chr5.4:14082130-14082149 | None:intergenic | 55.0% | |
| GCCAATCACACCACCTCCAA+GGG | - | chr5.4:14080358-14080377 | None:intergenic | 55.0% | |
| GCCACAACAGACTTGCCAGA+AGG | - | chr5.4:14082331-14082350 | None:intergenic | 55.0% | |
| GGTGTGATTGGCGACATGTG+TGG | + | chr5.4:14080366-14080385 | MS.gene59495:CDS | 55.0% | |
| ! | CAGGTTCTTCGGCCCTTTTC+CGG | - | chr5.4:14082464-14082483 | None:intergenic | 55.0% |
| ! | CGCAAGCAGTCTTGTCCTCA+AGG | + | chr5.4:14082131-14082150 | MS.gene59495:intron | 55.0% |
| ! | CGGTGCACTTTTGTTGCCCT+TGG | + | chr5.4:14080339-14080358 | MS.gene59495:CDS | 55.0% |
| !! | GCGACGGAGGGAGTATTGAT+AGG | - | chr5.4:14082114-14082133 | None:intergenic | 55.0% |
| AGAGGCTGTTGCAGCTGGCA+CGG | + | chr5.4:14083255-14083274 | MS.gene59495:CDS | 60.0% | |
| AGGGTTGGAGGTTGAGCCTG+GGG | - | chr5.4:14082311-14082330 | None:intergenic | 60.0% | |
| ATACGGGCGTGGACCCTCAT+AGG | - | chr5.4:14082060-14082079 | None:intergenic | 60.0% | |
| CAAGGCCGAGGTTGTGTCCT+TGG | + | chr5.4:14081409-14081428 | MS.gene59495:CDS | 60.0% | |
| CATGGAGAGGCTGTTGCAGC+TGG | + | chr5.4:14083250-14083269 | MS.gene59495:CDS | 60.0% | |
| CCAGAGAGGGAACTGGCATC+AGG | + | chr5.4:14080715-14080734 | MS.gene59495:CDS | 60.0% | |
| CCTGATGCCAGTTCCCTCTC+TGG | - | chr5.4:14080718-14080737 | None:intergenic | 60.0% | |
| CGCCAATCACACCACCTCCA+AGG | - | chr5.4:14080359-14080378 | None:intergenic | 60.0% | |
| GAAGGGTTGGAGGTTGAGCC+TGG | - | chr5.4:14082313-14082332 | None:intergenic | 60.0% | |
| GACAAGACTGCTTGCGACGG+AGG | - | chr5.4:14082127-14082146 | None:intergenic | 60.0% | |
| GCCCTTGGAGGTGGTGTGAT+TGG | + | chr5.4:14080354-14080373 | MS.gene59495:CDS | 60.0% | |
| GGCTATGGGCAGTGGCTTCA+TGG | + | chr5.4:14083232-14083251 | MS.gene59495:CDS | 60.0% | |
| GGCTCAACCTCCAACCCTTC+TGG | + | chr5.4:14082313-14082332 | MS.gene59495:intron | 60.0% | |
| TCAGGTTCCTCGATGTCCCC+AGG | + | chr5.4:14082292-14082311 | MS.gene59495:intron | 60.0% | |
| TGGGCAGTGGCTTCATGGAG+AGG | + | chr5.4:14083237-14083256 | MS.gene59495:CDS | 60.0% | |
| ! | GCTGCCGCTTCATTCCTACG+TGG | + | chr5.4:14080393-14080412 | MS.gene59495:CDS | 60.0% |
| ! | GTTCTTCGGCCCTTTTCCGG+TGG | - | chr5.4:14082461-14082480 | None:intergenic | 60.0% |
| ! | TTCTCAAGTTGCGCCCGCAC+CGG | - | chr5.4:14082528-14082547 | None:intergenic | 60.0% |
| !! | CTAGCGTTGGCTATGGGCAG+TGG | + | chr5.4:14083224-14083243 | MS.gene59495:CDS | 60.0% |
| !! | CTATGGTTTGCTGCCGGTGC+GGG | + | chr5.4:14082512-14082531 | MS.gene59495:intron | 60.0% |
| !! | GCTATGGTTTGCTGCCGGTG+CGG | + | chr5.4:14082511-14082530 | MS.gene59495:intron | 60.0% |
| !! | TGAGGGTGCCAGAGTTCACC+CGG | - | chr5.4:14082398-14082417 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGGGAGTTGTG+AGG | - | chr5.4:14081922-14081941 | None:intergenic | 60.0% |
| GGGTGAACTCTGGCACCCTC+AGG | + | chr5.4:14082397-14082416 | MS.gene59495:intron | 65.0% | |
| GGTTGAGCCTGGGGACATCG+AGG | - | chr5.4:14082302-14082321 | None:intergenic | 65.0% | |
| ! | CTTCGGCCCTTTTCCGGTGG+TGG | - | chr5.4:14082458-14082477 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 14078997 | 14083727 | 14078997 | ID=MS.gene59495 |
| chr5.4 | mRNA | 14078997 | 14083727 | 14078997 | ID=MS.gene59495.t1;Parent=MS.gene59495 |
| chr5.4 | exon | 14078997 | 14079121 | 14078997 | ID=MS.gene59495.t1.exon1;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14078997 | 14079121 | 14078997 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14080046 | 14080196 | 14080046 | ID=MS.gene59495.t1.exon2;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14080046 | 14080196 | 14080046 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14080288 | 14080455 | 14080288 | ID=MS.gene59495.t1.exon3;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14080288 | 14080455 | 14080288 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14080598 | 14080824 | 14080598 | ID=MS.gene59495.t1.exon4;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14080598 | 14080824 | 14080598 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14081364 | 14081487 | 14081364 | ID=MS.gene59495.t1.exon5;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14081364 | 14081487 | 14081364 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14083214 | 14083276 | 14083214 | ID=MS.gene59495.t1.exon6;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14083214 | 14083276 | 14083214 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14083365 | 14083508 | 14083365 | ID=MS.gene59495.t1.exon7;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14083365 | 14083508 | 14083365 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| chr5.4 | exon | 14083596 | 14083727 | 14083596 | ID=MS.gene59495.t1.exon8;Parent=MS.gene59495.t1 |
| chr5.4 | CDS | 14083596 | 14083727 | 14083596 | ID=cds.MS.gene59495.t1;Parent=MS.gene59495.t1 |
| Gene Sequence |
| Protein sequence |
