Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013566.t1 | XP_013461433.1 | 99.4 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 3.30E-167 | 597.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013566.t1 | Q9STP8 | 64.0 | 283 | 101 | 1 | 6 | 288 | 3 | 284 | 7.5e-96 | 352.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013566.t1 | A0A072V293 | 99.4 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 2.4e-167 | 597.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013566 | MS.gene066614 | PPI |
| MS.gene013566 | MS.gene67707 | PPI |
| MS.gene013566 | MS.gene67472 | PPI |
| MS.gene013566 | MS.gene20177 | PPI |
| MS.gene013566 | MS.gene99073 | PPI |
| MS.gene013566 | MS.gene75574 | PPI |
| MS.gene013566 | MS.gene045231 | PPI |
| MS.gene013566 | MS.gene64797 | PPI |
| MS.gene013566 | MS.gene59495 | PPI |
| MS.gene013566 | MS.gene55865 | PPI |
| MS.gene013566 | MS.gene99124 | PPI |
| MS.gene013566 | MS.gene006945 | PPI |
| MS.gene013566 | MS.gene006947 | PPI |
| MS.gene013566 | MS.gene059375 | PPI |
| MS.gene013566 | MS.gene006943 | PPI |
| MS.gene067034 | MS.gene013566 | PPI |
| MS.gene013566 | MS.gene79129 | PPI |
| MS.gene013566 | MS.gene50290 | PPI |
| MS.gene013566 | MS.gene67470 | PPI |
| MS.gene50288 | MS.gene013566 | PPI |
| MS.gene013566 | MS.gene37513 | PPI |
| MS.gene013566 | MS.gene059523 | PPI |
| MS.gene06194 | MS.gene013566 | PPI |
| MS.gene013566 | MS.gene049002 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013566.t1 | MTR_3g491870 | 99.160 | 357 | 3 | 0 | 1 | 357 | 1 | 357 | 0.0 | 737 |
| MS.gene013566.t1 | MTR_1g418545 | 38.462 | 130 | 66 | 3 | 101 | 219 | 165 | 291 | 1.72e-24 | 102 |
| MS.gene013566.t1 | MTR_5g043640 | 42.268 | 97 | 56 | 0 | 240 | 336 | 126 | 222 | 1.55e-16 | 78.6 |
| MS.gene013566.t1 | MTR_5g043640 | 33.945 | 109 | 69 | 1 | 241 | 346 | 94 | 202 | 2.63e-14 | 72.4 |
| MS.gene013566.t1 | MTR_5g043640 | 43.023 | 86 | 49 | 0 | 253 | 338 | 73 | 158 | 2.52e-13 | 69.3 |
| MS.gene013566.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 113 | 218 | 8.99e-16 | 76.3 |
| MS.gene013566.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 193 | 298 | 3.46e-15 | 75.9 |
| MS.gene013566.t1 | MTR_6g027840 | 32.394 | 142 | 88 | 2 | 210 | 345 | 333 | 472 | 3.06e-14 | 74.3 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 2.90e-12 | 66.6 |
| MS.gene013566.t1 | MTR_3g088410 | 33.696 | 92 | 61 | 0 | 238 | 329 | 21 | 112 | 3.07e-12 | 64.3 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 4.39e-12 | 67.0 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.21e-12 | 66.6 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.42e-12 | 66.6 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 8.93e-12 | 66.2 |
| MS.gene013566.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 9.10e-12 | 66.2 |
| MS.gene013566.t1 | MTR_5g023090 | 28.221 | 163 | 102 | 3 | 194 | 343 | 272 | 432 | 1.08e-11 | 66.2 |
| MS.gene013566.t1 | MTR_5g022050 | 33.000 | 100 | 65 | 1 | 244 | 343 | 301 | 398 | 3.40e-11 | 64.7 |
| MS.gene013566.t1 | MTR_5g077770 | 39.326 | 89 | 54 | 0 | 245 | 333 | 563 | 651 | 5.52e-11 | 64.3 |
| MS.gene013566.t1 | MTR_7g113200 | 32.653 | 98 | 62 | 1 | 106 | 199 | 13 | 110 | 5.88e-11 | 63.9 |
| MS.gene013566.t1 | MTR_5g026740 | 44.444 | 72 | 40 | 0 | 120 | 191 | 11 | 82 | 7.25e-11 | 58.5 |
| MS.gene013566.t1 | MTR_7g113200 | 33.684 | 95 | 59 | 1 | 109 | 199 | 16 | 110 | 8.38e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013566.t1 | AT4G27780 | 64.205 | 352 | 113 | 4 | 6 | 351 | 3 | 347 | 1.74e-154 | 438 |
| MS.gene013566.t1 | AT5G53470 | 61.714 | 350 | 118 | 4 | 6 | 355 | 3 | 336 | 4.71e-143 | 409 |
| MS.gene013566.t1 | AT4G27780 | 63.670 | 267 | 84 | 4 | 6 | 266 | 3 | 262 | 2.39e-105 | 310 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.56e-25 | 105 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.66e-25 | 105 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene013566.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene013566.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 9.39e-15 | 75.9 |
| MS.gene013566.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.39e-14 | 75.5 |
| MS.gene013566.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.42e-14 | 75.5 |
| MS.gene013566.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.43e-14 | 75.5 |
| MS.gene013566.t1 | AT2G03430 | 36.082 | 97 | 62 | 0 | 240 | 336 | 119 | 215 | 6.91e-14 | 70.9 |
| MS.gene013566.t1 | AT2G03430 | 44.444 | 81 | 45 | 0 | 258 | 338 | 71 | 151 | 2.10e-13 | 69.7 |
| MS.gene013566.t1 | AT2G03430 | 30.328 | 122 | 79 | 2 | 241 | 356 | 87 | 208 | 5.03e-12 | 65.5 |
| MS.gene013566.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 1.94e-13 | 72.0 |
| MS.gene013566.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 1.94e-13 | 72.0 |
| MS.gene013566.t1 | AT5G37500 | 41.111 | 90 | 53 | 0 | 245 | 334 | 539 | 628 | 5.81e-12 | 67.4 |
| MS.gene013566.t1 | AT5G40160 | 36.893 | 103 | 61 | 2 | 240 | 342 | 192 | 290 | 1.47e-11 | 65.1 |
| MS.gene013566.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 184 | 286 | 1.54e-11 | 65.1 |
| MS.gene013566.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene013566.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene013566.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene013566.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 230 | 332 | 2.40e-11 | 64.7 |
| MS.gene013566.t1 | AT5G66055 | 41.558 | 77 | 45 | 0 | 267 | 343 | 323 | 399 | 2.68e-11 | 65.1 |
| MS.gene013566.t1 | AT2G17390 | 32.039 | 103 | 70 | 0 | 241 | 343 | 224 | 326 | 5.44e-11 | 63.5 |
Find 93 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTCCTTTATAGGAAAA+TGG | 0.210754 | 3.4:-83989477 | MS.gene013566:intron |
| TAGGCAAGCGTGGCAGAAAT+TGG | 0.241228 | 3.4:-83991209 | MS.gene013566:CDS |
| TTCGGCTTCGGGACGGTGTC+CGG | 0.281477 | 3.4:+83992414 | None:intergenic |
| GATGTTCAGCTTCAGCTTTA+TGG | 0.297104 | 3.4:-83992211 | MS.gene013566:CDS |
| ATGTTCAGCTTCAGCTTTAT+GGG | 0.299378 | 3.4:-83992210 | MS.gene013566:CDS |
| AAATGACGGCTCGTGCTAAA+TGG | 0.312096 | 3.4:-83992132 | MS.gene013566:intron |
| TTGCTGCCGCCGCCGCGGAC+CGG | 0.322633 | 3.4:-83992255 | MS.gene013566:CDS |
| CCAGCAGCTCTGTGACATTA+AGG | 0.334693 | 3.4:+83988341 | None:intergenic |
| ACCGACTCAGCTTCGGCTTC+GGG | 0.342493 | 3.4:+83992403 | None:intergenic |
| GGTCCCCGAGCCTCTGAACT+TGG | 0.355498 | 3.4:+83990836 | None:intergenic |
| CGAAAGCCGGTCCGCGGCGG+CGG | 0.361695 | 3.4:+83992249 | None:intergenic |
| TTGGCTTGATGGTGCACCTT+TGG | 0.364530 | 3.4:-83991122 | MS.gene013566:intron |
| CTATATCCTACTTGGCTTGA+TGG | 0.365767 | 3.4:-83991133 | MS.gene013566:CDS |
| AACCGACTCAGCTTCGGCTT+CGG | 0.381980 | 3.4:+83992402 | None:intergenic |
| ATGATGATTATGATGATGAT+TGG | 0.403312 | 3.4:-83992333 | MS.gene013566:CDS |
| TGGCCCAAGTTCAGAGGCTC+GGG | 0.411198 | 3.4:-83990840 | MS.gene013566:CDS |
| AGCCGAAGCTGAGTCGGTTA+TGG | 0.416065 | 3.4:-83992398 | MS.gene013566:CDS |
| TCTTCCTCATGCTGCATAAA+CGG | 0.428588 | 3.4:+83987900 | None:intergenic |
| TAAACAAAAGAGCTGAATAC+TGG | 0.450530 | 3.4:+83990806 | None:intergenic |
| AGGAAAATGGATGCCATTCA+CGG | 0.450994 | 3.4:-83989464 | MS.gene013566:CDS |
| ATCAGAAACGAAAGCGTTGA+CGG | 0.451724 | 3.4:-83992361 | MS.gene013566:CDS |
| CAGCCCAGTGTAGCGGTGTC+CGG | 0.452667 | 3.4:+83988377 | None:intergenic |
| TCGGCTTCGGGACGGTGTCC+GGG | 0.456211 | 3.4:+83992415 | None:intergenic |
| AAATGGGTGAATGGCATGAT+TGG | 0.457260 | 3.4:-83992609 | MS.gene013566:CDS |
| CTACTAAAGTGTATCGAAAG+TGG | 0.458537 | 3.4:-83989413 | MS.gene013566:CDS |
| CGCGGACCGGCTTTCGCAGA+AGG | 0.462676 | 3.4:-83992242 | MS.gene013566:CDS |
| TGCCATCATTGTCTTCTGAA+TGG | 0.466803 | 3.4:+83987955 | None:intergenic |
| TCACAGAGCTGCTGGTTGGC+AGG | 0.467967 | 3.4:-83988333 | MS.gene013566:CDS |
| CTCTCTAGCAAATCCGTGAA+TGG | 0.469964 | 3.4:+83989451 | None:intergenic |
| TTCAGAGGCTCGGGGACCAA+TGG | 0.472100 | 3.4:-83990831 | MS.gene013566:CDS |
| AAGGCCGGACACCGCTACAC+TGG | 0.472472 | 3.4:-83988381 | MS.gene013566:CDS |
| TGATGATTATGATGATGATT+GGG | 0.475622 | 3.4:-83992332 | MS.gene013566:CDS |
| TACTTCTGCATTGCATCCTC+AGG | 0.475742 | 3.4:+83991175 | None:intergenic |
| GTGGCCCAAGTTCAGAGGCT+CGG | 0.480788 | 3.4:-83990841 | MS.gene013566:CDS |
| CCTTAATGTCACAGAGCTGC+TGG | 0.483735 | 3.4:-83988341 | MS.gene013566:CDS |
| TGTCGGAACTATATCCTACT+TGG | 0.487009 | 3.4:-83991141 | MS.gene013566:CDS |
| TGGAGTTTCAGTGAATTTGA+AGG | 0.487800 | 3.4:-83989393 | MS.gene013566:CDS |
| GAAACGAAAGCGTTGACGGT+GGG | 0.490532 | 3.4:-83992357 | MS.gene013566:CDS |
| GACGACGTCGTTTCTGATCC+CGG | 0.498134 | 3.4:-83992433 | MS.gene013566:CDS |
| CTTTGACAGAGAAGTAAAAC+CGG | 0.501146 | 3.4:-83990872 | MS.gene013566:intron |
| TCAGAGGCTCGGGGACCAAT+GGG | 0.511058 | 3.4:-83990830 | MS.gene013566:CDS |
| AGGCAAGCGTGGCAGAAATT+GGG | 0.512730 | 3.4:-83991208 | MS.gene013566:CDS |
| TACTGAAGGTCCTTGTAGTA+CGG | 0.514723 | 3.4:-83992173 | MS.gene013566:CDS |
| GTCCCCGAGCCTCTGAACTT+GGG | 0.519979 | 3.4:+83990837 | None:intergenic |
| AGCCATAACCGACTCAGCTT+CGG | 0.524028 | 3.4:+83992396 | None:intergenic |
| CTTCACCAAGTATTCAGCTA+TGG | 0.524917 | 3.4:+83987992 | None:intergenic |
| AGAATCCATAGCTGAATACT+TGG | 0.526526 | 3.4:-83987997 | MS.gene013566:CDS |
| AGTAAAACCGGCGACGGTGG+TGG | 0.531277 | 3.4:-83990860 | MS.gene013566:CDS |
| ACTTGGGCCACCACCGTCGC+CGG | 0.539075 | 3.4:+83990853 | None:intergenic |
| GAGCTGAATACTGGTCCCAT+TGG | 0.543058 | 3.4:+83990815 | None:intergenic |
| CAACTTTCTGTAGGCAAGCG+TGG | 0.544482 | 3.4:-83991219 | MS.gene013566:intron |
| GACACCGCTACACTGGGCTG+TGG | 0.545393 | 3.4:-83988374 | MS.gene013566:CDS |
| CTGCGAAAGCCGGTCCGCGG+CGG | 0.545771 | 3.4:+83992246 | None:intergenic |
| TGATGATGATTGGGAAGGTG+TGG | 0.546547 | 3.4:-83992323 | MS.gene013566:CDS |
| GGAGTTTCAGTGAATTTGAA+GGG | 0.548533 | 3.4:-83989392 | MS.gene013566:intron |
| GAAGGTTGAGCCGTACTACA+AGG | 0.554732 | 3.4:+83992163 | None:intergenic |
| CTACACTGGGCTGTGGATCG+TGG | 0.555327 | 3.4:-83988367 | MS.gene013566:CDS |
| AGGCCGGACACCGCTACACT+GGG | 0.560736 | 3.4:-83988380 | MS.gene013566:CDS |
| TCGACACCTTCTGCGAAAGC+CGG | 0.563972 | 3.4:+83992236 | None:intergenic |
| CGGTGGTGGCCCAAGTTCAG+AGG | 0.566168 | 3.4:-83990846 | MS.gene013566:CDS |
| AAACGAAAGCGTTGACGGTG+GGG | 0.575349 | 3.4:-83992356 | MS.gene013566:CDS |
| GGTGCACCATCAAGCCAAGT+AGG | 0.576322 | 3.4:+83991127 | None:intergenic |
| ATCGTGTGAAACGACGGCGT+TGG | 0.582169 | 3.4:+83992468 | None:intergenic |
| TGTATCATCGTGTGAAACGA+CGG | 0.586740 | 3.4:+83992462 | None:intergenic |
| TATGTGCAGACAGTGAAGGC+CGG | 0.586771 | 3.4:-83988396 | MS.gene013566:intron |
| TCCCGAAGCCGAAGCTGAGT+CGG | 0.589483 | 3.4:-83992404 | MS.gene013566:CDS |
| ACCTTCTCCTCTCAAAATGA+CGG | 0.595594 | 3.4:-83992146 | MS.gene013566:CDS |
| GAAATATGTGCAGACAGTGA+AGG | 0.596575 | 3.4:-83988400 | MS.gene013566:intron |
| ATCCATTCAGAAGACAATGA+TGG | 0.596681 | 3.4:-83987957 | MS.gene013566:CDS |
| TTCTGCATTGCATCCTCAGG+AGG | 0.597440 | 3.4:+83991178 | None:intergenic |
| ACTCAGCTTCGGCTTCGGGA+CGG | 0.601526 | 3.4:+83992407 | None:intergenic |
| CACGTAACAGCGTAATGCAG+TGG | 0.604125 | 3.4:+83988026 | None:intergenic |
| GTGACATCTGTAGTTCGAAG+TGG | 0.610305 | 3.4:-83987923 | MS.gene013566:CDS |
| AGAAGTAAAACCGGCGACGG+TGG | 0.613500 | 3.4:-83990863 | MS.gene013566:CDS |
| CTTCTGCGAAAGCCGGTCCG+CGG | 0.613659 | 3.4:+83992243 | None:intergenic |
| GTTGTTGAATGAAACGACGA+TGG | 0.619984 | 3.4:+83992522 | None:intergenic |
| AATGTCACAGAGCTGCTGGT+TGG | 0.620200 | 3.4:-83988337 | MS.gene013566:CDS |
| TTGTATAAGATTGCTACTGA+AGG | 0.622050 | 3.4:-83992187 | MS.gene013566:CDS |
| TTTGTTTACGAAGAGGAATG+TGG | 0.624188 | 3.4:-83990791 | MS.gene013566:CDS |
| GAAGTACATTGACATTGTGT+CGG | 0.625855 | 3.4:-83991158 | MS.gene013566:CDS |
| CATTCACGGATTTGCTAGAG+AGG | 0.627592 | 3.4:-83989450 | MS.gene013566:CDS |
| GAGTCGGTTATGGCTGAGCA+AGG | 0.627643 | 3.4:-83992388 | MS.gene013566:CDS |
| GAATGCTGATGTAAATGCCA+AGG | 0.631032 | 3.4:-83988311 | MS.gene013566:intron |
| ATTCACGGATTTGCTAGAGA+GGG | 0.635621 | 3.4:-83989449 | MS.gene013566:CDS |
| CGATCCACAGCCCAGTGTAG+CGG | 0.638544 | 3.4:+83988370 | None:intergenic |
| GGCCCAAGTTCAGAGGCTCG+GGG | 0.645540 | 3.4:-83990839 | MS.gene013566:CDS |
| GGTAAGAGAAGATTAAACCG+AGG | 0.648737 | 3.4:+83992563 | None:intergenic |
| GGAGAGTACTGAATTAGATG+AGG | 0.670681 | 3.4:-83992302 | MS.gene013566:CDS |
| CAGAGAAGTAAAACCGGCGA+CGG | 0.678218 | 3.4:-83990866 | MS.gene013566:CDS |
| AGAAACGAAAGCGTTGACGG+TGG | 0.679861 | 3.4:-83992358 | MS.gene013566:CDS |
| GATTATGATGATGATTGGGA+AGG | 0.681559 | 3.4:-83992328 | MS.gene013566:CDS |
| ATTGGGTGCTATGCCTCCTG+AGG | 0.688948 | 3.4:-83991191 | MS.gene013566:CDS |
| GTGGCCGTTTATGCAGCATG+AGG | 0.693675 | 3.4:-83987904 | MS.gene013566:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGACATTATTTAAATGTA+CGG | - | chr3.4:83990876-83990895 | MS.gene013566:intron | 15.0% |
| !! | ATCATTTGTGTAAATAAAAA+AGG | + | chr3.4:83990741-83990760 | None:intergenic | 15.0% |
| !!! | AACATAAACTTAAATTTTAG+CGG | - | chr3.4:83991288-83991307 | MS.gene013566:intron | 15.0% |
| !!! | TTATTTTATCTTAAGTCTTT+TGG | - | chr3.4:83991198-83991217 | MS.gene013566:CDS | 15.0% |
| !! | AAACTAAGAAAAACTATAAG+AGG | - | chr3.4:83988879-83988898 | MS.gene013566:intron | 20.0% |
| !! | AATACAAATACATCCAAAAT+AGG | + | chr3.4:83988602-83988621 | None:intergenic | 20.0% |
| !! | ATTTGTGTAAATAAAAAAGG+TGG | + | chr3.4:83990738-83990757 | None:intergenic | 20.0% |
| !! | TTTCAAAGTTAAAACTAAGA+AGG | + | chr3.4:83990323-83990342 | None:intergenic | 20.0% |
| !!! | AGTCTTTTATTTTGAGAAAT+AGG | - | chr3.4:83989113-83989132 | MS.gene013566:intron | 20.0% |
| !!! | AGTTTTTTTTTCTTTTTCCT+TGG | - | chr3.4:83988551-83988570 | MS.gene013566:intron | 20.0% |
| !!! | ATATGTATATTTCAGTGTTT+TGG | - | chr3.4:83991337-83991356 | MS.gene013566:intron | 20.0% |
| !!! | ATTTTATTGAAGATTTAGAG+AGG | - | chr3.4:83988712-83988731 | MS.gene013566:intron | 20.0% |
| !!! | CACTATTTCTTTCTATAAAA+GGG | - | chr3.4:83989495-83989514 | MS.gene013566:intron | 20.0% |
| !!! | GCTAATTTTTTATAACTGAA+AGG | + | chr3.4:83991507-83991526 | None:intergenic | 20.0% |
| !!! | GGTTATTTTGTTAATTGTTT+TGG | - | chr3.4:83989235-83989254 | MS.gene013566:intron | 20.0% |
| !!! | GTTTTTTTTTCTTTTTCCTT+GGG | - | chr3.4:83988552-83988571 | MS.gene013566:intron | 20.0% |
| !!! | TCACTATTTCTTTCTATAAA+AGG | - | chr3.4:83989494-83989513 | MS.gene013566:intron | 20.0% |
| ! | AACGCATATTGTTAAAGAAA+AGG | + | chr3.4:83992073-83992092 | None:intergenic | 25.0% |
| ! | AAGAATGCTGAAGATATTTA+TGG | + | chr3.4:83991974-83991993 | None:intergenic | 25.0% |
| ! | AATAAAAGACTTGTGTATGT+TGG | + | chr3.4:83989104-83989123 | None:intergenic | 25.0% |
| ! | AATATACATATGCTTGTGTT+AGG | + | chr3.4:83991328-83991347 | None:intergenic | 25.0% |
| ! | ACAAGATCAATCATTTCTTA+AGG | + | chr3.4:83991736-83991755 | None:intergenic | 25.0% |
| ! | ACAGGTCTTTATATATTACA+CGG | - | chr3.4:83990053-83990072 | MS.gene013566:intron | 25.0% |
| ! | AGAATGCTGAAGATATTTAT+GGG | + | chr3.4:83991973-83991992 | None:intergenic | 25.0% |
| ! | ATAACAAGACAAATTTAGGA+AGG | + | chr3.4:83990264-83990283 | None:intergenic | 25.0% |
| ! | ATAACTGAATTGACATTACA+TGG | - | chr3.4:83991453-83991472 | MS.gene013566:intron | 25.0% |
| ! | ATCAAAAGGCAACAATTTAT+TGG | - | chr3.4:83990963-83990982 | MS.gene013566:intron | 25.0% |
| ! | CAAAATGCCAATAGTTTAAT+GGG | + | chr3.4:83990794-83990813 | None:intergenic | 25.0% |
| ! | GCATATAACAAGACAAATTT+AGG | + | chr3.4:83990268-83990287 | None:intergenic | 25.0% |
| ! | GGGTTAATAGTGTATATATT+TGG | - | chr3.4:83988489-83988508 | MS.gene013566:intron | 25.0% |
| ! | TAACAAGACAAATTTAGGAA+GGG | + | chr3.4:83990263-83990282 | None:intergenic | 25.0% |
| ! | TAATGAGTTAGATCGAAATA+TGG | - | chr3.4:83988926-83988945 | MS.gene013566:intron | 25.0% |
| ! | TAGAATACGCATAAAATCTT+TGG | - | chr3.4:83990545-83990564 | MS.gene013566:intron | 25.0% |
| ! | TATCTTCCTTTATAGGAAAA+TGG | - | chr3.4:83991020-83991039 | MS.gene013566:intron | 25.0% |
| ! | TCAAAAGGCAACAATTTATT+GGG | - | chr3.4:83990964-83990983 | MS.gene013566:intron | 25.0% |
| ! | TCAACTTTCTATCTTCAAAT+AGG | + | chr3.4:83991430-83991449 | None:intergenic | 25.0% |
| ! | TCAATTTAGAGAACAAGAAA+CGG | + | chr3.4:83989413-83989432 | None:intergenic | 25.0% |
| ! | TCTTCAAGTGGTAATTATAA+CGG | - | chr3.4:83989901-83989920 | MS.gene013566:intron | 25.0% |
| ! | TGAAGAATAATGTATACACT+TGG | + | chr3.4:83991155-83991174 | None:intergenic | 25.0% |
| ! | TGCATAATGTAGTATAGTTT+AGG | - | chr3.4:83992345-83992364 | MS.gene013566:CDS | 25.0% |
| ! | TGTAGAAGACAATAAAAGAA+AGG | - | chr3.4:83988434-83988453 | MS.gene013566:intron | 25.0% |
| ! | TTTCATTACATCACACTATT+TGG | - | chr3.4:83991907-83991926 | MS.gene013566:intron | 25.0% |
| !! | AAAAATTATTGAGTTGCAGA+AGG | + | chr3.4:83990425-83990444 | None:intergenic | 25.0% |
| !! | AATTTGTCTTGTTATATGCT+AGG | - | chr3.4:83990269-83990288 | MS.gene013566:intron | 25.0% |
| !! | ACATTACGCAACAATTTTAA+AGG | - | chr3.4:83988468-83988487 | MS.gene013566:intron | 25.0% |
| !! | ACTATTGGCACTTTAAAAAT+GGG | - | chr3.4:83991658-83991677 | MS.gene013566:intron | 25.0% |
| !! | AGGTTACTTTATTAATCAGT+AGG | - | chr3.4:83990841-83990860 | MS.gene013566:CDS | 25.0% |
| !! | ATAGATTCTTTAGCCTATTT+TGG | - | chr3.4:83988586-83988605 | MS.gene013566:intron | 25.0% |
| !! | ATAGTATTGAATGAATACCT+TGG | + | chr3.4:83992206-83992225 | None:intergenic | 25.0% |
| !! | ATCTTCAAATAGGCATTTTT+AGG | + | chr3.4:83991420-83991439 | None:intergenic | 25.0% |
| !! | ATGATGATTATGATGATGAT+TGG | - | chr3.4:83988164-83988183 | MS.gene013566:intron | 25.0% |
| !! | CACTATTTCTTTCTATACAA+GGG | - | chr3.4:83989438-83989457 | MS.gene013566:CDS | 25.0% |
| !! | CATTACGCAACAATTTTAAA+GGG | - | chr3.4:83988469-83988488 | MS.gene013566:intron | 25.0% |
| !! | GCTTCTTTATCTTTTCTTAA+AGG | - | chr3.4:83990194-83990213 | MS.gene013566:intron | 25.0% |
| !! | TAACTGTTTAGAATGAAAAC+AGG | - | chr3.4:83992279-83992298 | MS.gene013566:CDS | 25.0% |
| !! | TCACTATTTCTTTCTATACA+AGG | - | chr3.4:83989437-83989456 | MS.gene013566:CDS | 25.0% |
| !! | TGATGATTATGATGATGATT+GGG | - | chr3.4:83988165-83988184 | MS.gene013566:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | - | chr3.4:83988946-83988965 | MS.gene013566:intron | 25.0% |
| !!! | AAATCTTTGGTTAGCTTTTA+TGG | - | chr3.4:83990558-83990577 | MS.gene013566:intron | 25.0% |
| !!! | CTGCAACTCAATAATTTTTT+TGG | - | chr3.4:83990426-83990445 | MS.gene013566:intron | 25.0% |
| !!! | GTTTTTTCCCATTAAACTAT+TGG | - | chr3.4:83990784-83990803 | MS.gene013566:CDS | 25.0% |
| !!! | TCTGATGTTTTCTTTTTTGA+AGG | - | chr3.4:83992431-83992450 | MS.gene013566:CDS | 25.0% |
| !!! | TCTTTTTTGAAGGATAATGA+TGG | - | chr3.4:83992441-83992460 | MS.gene013566:CDS | 25.0% |
| AAAAAAGGTGGTTCAAAAGA+AGG | + | chr3.4:83990726-83990745 | None:intergenic | 30.0% | |
| AACAAGACAAATTTAGGAAG+GGG | + | chr3.4:83990262-83990281 | None:intergenic | 30.0% | |
| ATAAAGACCTGTCATTAGAT+AGG | + | chr3.4:83990045-83990064 | None:intergenic | 30.0% | |
| ATGTAGTATAGTTTAGGCTT+TGG | - | chr3.4:83992351-83992370 | MS.gene013566:CDS | 30.0% | |
| CCAAAATGCCAATAGTTTAA+TGG | + | chr3.4:83990795-83990814 | None:intergenic | 30.0% | |
| CTGCTATTAAAAACTCATAG+AGG | + | chr3.4:83988533-83988552 | None:intergenic | 30.0% | |
| GATACACTCAAAGTGATAAT+AGG | - | chr3.4:83990297-83990316 | MS.gene013566:intron | 30.0% | |
| GGGAGAATGATGTATTTAAA+AGG | - | chr3.4:83989515-83989534 | MS.gene013566:intron | 30.0% | |
| GTCTTTATATATTACACGGT+TGG | - | chr3.4:83990057-83990076 | MS.gene013566:intron | 30.0% | |
| GTTTCGTTATCTTCCTTTAT+AGG | - | chr3.4:83991013-83991032 | MS.gene013566:intron | 30.0% | |
| TAAACAAAAGAGCTGAATAC+TGG | + | chr3.4:83989694-83989713 | None:intergenic | 30.0% | |
| TAAAGACCTGTCATTAGATA+GGG | + | chr3.4:83990044-83990063 | None:intergenic | 30.0% | |
| TAAATTAACGTTTGGATGAG+CGG | - | chr3.4:83988659-83988678 | MS.gene013566:intron | 30.0% | |
| TCGTAGATCTCTACTAATTT+GGG | - | chr3.4:83991841-83991860 | MS.gene013566:intron | 30.0% | |
| TCTATTTGAACTTATACCCA+AGG | + | chr3.4:83988571-83988590 | None:intergenic | 30.0% | |
| TGATGATATCTTGGTTCATT+GGG | + | chr3.4:83990623-83990642 | None:intergenic | 30.0% | |
| TGTAGTATAGTTTAGGCTTT+GGG | - | chr3.4:83992352-83992371 | MS.gene013566:CDS | 30.0% | |
| TGTTGAAGACACTAAAGTTA+TGG | + | chr3.4:83991705-83991724 | None:intergenic | 30.0% | |
| TTACATGGAATTAATCTTGC+TGG | - | chr3.4:83991468-83991487 | MS.gene013566:intron | 30.0% | |
| TTATGTTGTCATACTGAAGT+CGG | + | chr3.4:83991275-83991294 | None:intergenic | 30.0% | |
| TTGTATAAGATTGCTACTGA+AGG | - | chr3.4:83988310-83988329 | MS.gene013566:intron | 30.0% | |
| TTTCAAATTTGAACAGAGCA+AGG | - | chr3.4:83990363-83990382 | MS.gene013566:intron | 30.0% | |
| TTTCTAAGCTTTGCATCATA+GGG | - | chr3.4:83990520-83990539 | MS.gene013566:intron | 30.0% | |
| ! | AGAAAAACCAGACATCATTT+TGG | - | chr3.4:83990115-83990134 | MS.gene013566:intron | 30.0% |
| ! | CACTATTGGCACTTTAAAAA+TGG | - | chr3.4:83991657-83991676 | MS.gene013566:intron | 30.0% |
| ! | CCATTAAACTATTGGCATTT+TGG | - | chr3.4:83990792-83990811 | MS.gene013566:CDS | 30.0% |
| ! | CTTCTTCAATCAATTTTCCT+CGG | - | chr3.4:83987917-83987936 | MS.gene013566:CDS | 30.0% |
| ! | TGTTTAGAATGAAAACAGGA+TGG | - | chr3.4:83992283-83992302 | MS.gene013566:CDS | 30.0% |
| ! | TTAAACTATTGGCATTTTGG+AGG | - | chr3.4:83990795-83990814 | MS.gene013566:CDS | 30.0% |
| ! | TTTAAATGTACGGAGTACTA+AGG | - | chr3.4:83990886-83990905 | MS.gene013566:intron | 30.0% |
| !!! | ATGTTTTAATGCATTCCTTC+AGG | - | chr3.4:83992226-83992245 | MS.gene013566:CDS | 30.0% |
| !!! | TGTTTTAATGCATTCCTTCA+GGG | - | chr3.4:83992227-83992246 | MS.gene013566:CDS | 30.0% |
| !!! | TTAGTTTTATCAAGCATGCT+TGG | + | chr3.4:83990657-83990676 | None:intergenic | 30.0% |
| AAACAGGATGGAACTTTAGT+TGG | - | chr3.4:83992295-83992314 | MS.gene013566:CDS | 35.0% | |
| AAAGACCTGTCATTAGATAG+GGG | + | chr3.4:83990043-83990062 | None:intergenic | 35.0% | |
| AAATGACTGCATGCAATTGT+TGG | + | chr3.4:83989168-83989187 | None:intergenic | 35.0% | |
| AACAAAGGTAAGACTAGAGA+AGG | + | chr3.4:83989994-83990013 | None:intergenic | 35.0% | |
| AAGACAGACATAGCTCATTT+AGG | + | chr3.4:83991550-83991569 | None:intergenic | 35.0% | |
| AAGATTTAGAGAGGAAGTTG+GGG | - | chr3.4:83988721-83988740 | MS.gene013566:intron | 35.0% | |
| AAGGAGACAGATTAATGAGA+AGG | + | chr3.4:83990687-83990706 | None:intergenic | 35.0% | |
| AATATTGCTTTGTGGGTTTC+TGG | - | chr3.4:83990388-83990407 | MS.gene013566:intron | 35.0% | |
| AATTAAGCCAATAGTGCAGA+TGG | + | chr3.4:83992258-83992277 | None:intergenic | 35.0% | |
| ACAAAGGTAAGACTAGAGAA+GGG | + | chr3.4:83989993-83990012 | None:intergenic | 35.0% | |
| ACGTTAATTTACAGCAGAGT+TGG | + | chr3.4:83988650-83988669 | None:intergenic | 35.0% | |
| AGAATCCATAGCTGAATACT+TGG | - | chr3.4:83992500-83992519 | MS.gene013566:CDS | 35.0% | |
| AGCTTAAGTGAAGAATTAGC+TGG | - | chr3.4:83991524-83991543 | MS.gene013566:intron | 35.0% | |
| AGGAGACAGATTAATGAGAA+GGG | + | chr3.4:83990686-83990705 | None:intergenic | 35.0% | |
| AGTAGTGAGAGTAGATCAAA+TGG | - | chr3.4:83988827-83988846 | MS.gene013566:intron | 35.0% | |
| ATCCATTCAGAAGACAATGA+TGG | - | chr3.4:83992540-83992559 | MS.gene013566:CDS | 35.0% | |
| ATTATGCAACTTATGCAGTG+AGG | + | chr3.4:83992333-83992352 | None:intergenic | 35.0% | |
| CAAGGACAATATTGCTTTGT+GGG | - | chr3.4:83990381-83990400 | MS.gene013566:intron | 35.0% | |
| CATGTTACCAAAATGATGTC+TGG | + | chr3.4:83990125-83990144 | None:intergenic | 35.0% | |
| CTACTAAAGTGTATCGAAAG+TGG | - | chr3.4:83991084-83991103 | MS.gene013566:intron | 35.0% | |
| CTCGTAGATCTCTACTAATT+TGG | - | chr3.4:83991840-83991859 | MS.gene013566:intron | 35.0% | |
| CTCTGCTGTAAATTAACGTT+TGG | - | chr3.4:83988651-83988670 | MS.gene013566:intron | 35.0% | |
| CTTTGACAGAGAAGTAAAAC+CGG | - | chr3.4:83989625-83989644 | MS.gene013566:intron | 35.0% | |
| GAACCAAGATATCATCACTT+TGG | - | chr3.4:83990626-83990645 | MS.gene013566:intron | 35.0% | |
| GAAGATTTAGAGAGGAAGTT+GGG | - | chr3.4:83988720-83988739 | MS.gene013566:intron | 35.0% | |
| GAAGTACATTGACATTGTGT+CGG | - | chr3.4:83989339-83989358 | MS.gene013566:intron | 35.0% | |
| GCAAAAGATTCAGTCAACAA+AGG | + | chr3.4:83990009-83990028 | None:intergenic | 35.0% | |
| GGAGTTTCAGTGAATTTGAA+GGG | - | chr3.4:83991105-83991124 | MS.gene013566:intron | 35.0% | |
| GTATACCACAGATTCACTAT+TGG | - | chr3.4:83991643-83991662 | MS.gene013566:intron | 35.0% | |
| GTGATGATATCTTGGTTCAT+TGG | + | chr3.4:83990624-83990643 | None:intergenic | 35.0% | |
| GTTTCTAAGCTTTGCATCAT+AGG | - | chr3.4:83990519-83990538 | MS.gene013566:intron | 35.0% | |
| TAGATCTCTACTAATTTGGG+AGG | - | chr3.4:83991844-83991863 | MS.gene013566:intron | 35.0% | |
| TAGCACCTATAGTAGAAAGA+TGG | - | chr3.4:83988744-83988763 | MS.gene013566:intron | 35.0% | |
| TATACCCTTCAACTTTCTGT+AGG | - | chr3.4:83989269-83989288 | MS.gene013566:intron | 35.0% | |
| TCAAAGAAACAACACGAGTT+GGG | + | chr3.4:83989611-83989630 | None:intergenic | 35.0% | |
| TCTCTTGCATCTTTGTTCTT+AGG | - | chr3.4:83991615-83991634 | MS.gene013566:intron | 35.0% | |
| TGAACAAAAGCTGCTAATGA+GGG | + | chr3.4:83991242-83991261 | None:intergenic | 35.0% | |
| TGAAGATTTAGAGAGGAAGT+TGG | - | chr3.4:83988719-83988738 | MS.gene013566:intron | 35.0% | |
| TGGAGTTTCAGTGAATTTGA+AGG | - | chr3.4:83991104-83991123 | MS.gene013566:intron | 35.0% | |
| TGTTAGAAGAGCCAAATCAA+AGG | + | chr3.4:83990589-83990608 | None:intergenic | 35.0% | |
| TTAATGGGAAAAAACACACG+CGG | + | chr3.4:83990779-83990798 | None:intergenic | 35.0% | |
| TTATGGAGAGTCCTTTGATT+TGG | - | chr3.4:83990575-83990594 | MS.gene013566:intron | 35.0% | |
| TTCCACCATCTTTCTACTAT+AGG | + | chr3.4:83988752-83988771 | None:intergenic | 35.0% | |
| TTCTAAGCTTTGCATCATAG+GGG | - | chr3.4:83990521-83990540 | MS.gene013566:intron | 35.0% | |
| TTGATAGACCTCCTAAGAAT+CGG | + | chr3.4:83989929-83989948 | None:intergenic | 35.0% | |
| TTGCATCTTTGTTCTTAGGA+AGG | - | chr3.4:83991619-83991638 | MS.gene013566:intron | 35.0% | |
| TTTGTTTACGAAGAGGAATG+TGG | - | chr3.4:83989706-83989725 | MS.gene013566:intron | 35.0% | |
| ! | ATGTTCAGCTTCAGCTTTAT+GGG | - | chr3.4:83988287-83988306 | MS.gene013566:intron | 35.0% |
| ! | ATTTGAGATAGCCAGAATCA+TGG | + | chr3.4:83989070-83989089 | None:intergenic | 35.0% |
| ! | GAAGTGAGATTGATTCTCTA+CGG | - | chr3.4:83989956-83989975 | MS.gene013566:intron | 35.0% |
| ! | GATTATGATGATGATTGGGA+AGG | - | chr3.4:83988169-83988188 | MS.gene013566:intron | 35.0% |
| ! | TCTTGTTATATGCTAGGCTT+TGG | - | chr3.4:83990275-83990294 | MS.gene013566:intron | 35.0% |
| ! | TGGATATGAGTTTTGCAAGA+AGG | + | chr3.4:83987958-83987977 | None:intergenic | 35.0% |
| ! | TGGCATCCATTTTCCTATAA+AGG | + | chr3.4:83991029-83991048 | None:intergenic | 35.0% |
| !! | ATAGTTTAGGCTTTGGGATA+TGG | - | chr3.4:83992358-83992377 | MS.gene013566:CDS | 35.0% |
| !! | CATTTTGGAGGAATGATTTC+AGG | - | chr3.4:83990807-83990826 | MS.gene013566:CDS | 35.0% |
| !! | GTTTTAATGCATTCCTTCAG+GGG | - | chr3.4:83992228-83992247 | MS.gene013566:CDS | 35.0% |
| !! | TTTGTGGGTTTCTGGAATTA+AGG | - | chr3.4:83990396-83990415 | MS.gene013566:intron | 35.0% |
| AAGTGCCAATAGTGAATCTG+TGG | + | chr3.4:83991651-83991670 | None:intergenic | 40.0% | |
| ACCTTCTCCTCTCAAAATGA+CGG | - | chr3.4:83988351-83988370 | MS.gene013566:CDS | 40.0% | |
| AGATCAAATGGAGGATAGTC+AGG | - | chr3.4:83988839-83988858 | MS.gene013566:intron | 40.0% | |
| AGGAAAATGGATGCCATTCA+CGG | - | chr3.4:83991033-83991052 | MS.gene013566:intron | 40.0% | |
| AGGATAGTCAGGTCACTAAA+GGG | - | chr3.4:83988850-83988869 | MS.gene013566:intron | 40.0% | |
| AGTGAGAGTAGATCAAATGG+AGG | - | chr3.4:83988830-83988849 | MS.gene013566:intron | 40.0% | |
| AGTGGGAGTGAAAGCTAAAA+TGG | + | chr3.4:83991589-83991608 | None:intergenic | 40.0% | |
| ATAACCATACTTGACCAGGT+AGG | + | chr3.4:83989193-83989212 | None:intergenic | 40.0% | |
| CAAAGGTAAGACTAGAGAAG+GGG | + | chr3.4:83989992-83990011 | None:intergenic | 40.0% | |
| CACCTATAGTAGAAAGATGG+TGG | - | chr3.4:83988747-83988766 | MS.gene013566:intron | 40.0% | |
| CATAACCAATTAGTGACGCA+TGG | + | chr3.4:83989800-83989819 | None:intergenic | 40.0% | |
| CCAAGATATCATCACTTTGG+AGG | - | chr3.4:83990629-83990648 | MS.gene013566:intron | 40.0% | |
| CCTCCAAAGTGATGATATCT+TGG | + | chr3.4:83990632-83990651 | None:intergenic | 40.0% | |
| CGTGAAGCTTCTTCATCAAA+AGG | - | chr3.4:83990949-83990968 | MS.gene013566:intron | 40.0% | |
| CTGAACAAAAGCTGCTAATG+AGG | + | chr3.4:83991243-83991262 | None:intergenic | 40.0% | |
| CTGCATATATCACCTGTAGA+TGG | - | chr3.4:83989774-83989793 | MS.gene013566:intron | 40.0% | |
| CTTCACCAAGTATTCAGCTA+TGG | + | chr3.4:83992508-83992527 | None:intergenic | 40.0% | |
| CTTGCCTACAGAAAGTTGAA+GGG | + | chr3.4:83989276-83989295 | None:intergenic | 40.0% | |
| GAAATATGTGCAGACAGTGA+AGG | - | chr3.4:83992097-83992116 | MS.gene013566:intron | 40.0% | |
| GAATGCTGATGTAAATGCCA+AGG | - | chr3.4:83992186-83992205 | MS.gene013566:CDS | 40.0% | |
| GATGTTCAGCTTCAGCTTTA+TGG | - | chr3.4:83988286-83988305 | MS.gene013566:intron | 40.0% | |
| GATTTCAGGAACTGATCACA+AGG | - | chr3.4:83990821-83990840 | MS.gene013566:CDS | 40.0% | |
| GCAAGGACAATATTGCTTTG+TGG | - | chr3.4:83990380-83990399 | MS.gene013566:intron | 40.0% | |
| GGTAAGAGAAGATTAAACCG+AGG | + | chr3.4:83987937-83987956 | None:intergenic | 40.0% | |
| GTCAAAGAAACAACACGAGT+TGG | + | chr3.4:83989612-83989631 | None:intergenic | 40.0% | |
| GTTGTTGAATGAAACGACGA+TGG | + | chr3.4:83987978-83987997 | None:intergenic | 40.0% | |
| TAACTACTGGAGAGACATCA+GGG | + | chr3.4:83989868-83989887 | None:intergenic | 40.0% | |
| TACTGAAGGTCCTTGTAGTA+CGG | - | chr3.4:83988324-83988343 | MS.gene013566:CDS | 40.0% | |
| TCTCAAAAAGCCTCAGCAAT+TGG | - | chr3.4:83991394-83991413 | MS.gene013566:intron | 40.0% | |
| TCTCCAGTAGTTAGATTGGT+GGG | - | chr3.4:83989875-83989894 | MS.gene013566:intron | 40.0% | |
| TCTTCCTCATGCTGCATAAA+CGG | + | chr3.4:83992600-83992619 | None:intergenic | 40.0% | |
| TGATAGACCTCCTAAGAATC+GGG | + | chr3.4:83989928-83989947 | None:intergenic | 40.0% | |
| TGCCATCATTGTCTTCTGAA+TGG | + | chr3.4:83992545-83992564 | None:intergenic | 40.0% | |
| TGTATCATCGTGTGAAACGA+CGG | + | chr3.4:83988038-83988057 | None:intergenic | 40.0% | |
| TGTCGGAACTATATCCTACT+TGG | - | chr3.4:83989356-83989375 | MS.gene013566:intron | 40.0% | |
| TGTCTCTCCAGTAGTTAGAT+TGG | - | chr3.4:83989871-83989890 | MS.gene013566:intron | 40.0% | |
| TTATAACGGTCCCGATTCTT+AGG | - | chr3.4:83989915-83989934 | MS.gene013566:intron | 40.0% | |
| ! | CTATATCCTACTTGGCTTGA+TGG | - | chr3.4:83989364-83989383 | MS.gene013566:intron | 40.0% |
| ! | TAGCTTTTGCGCCAAAATCA+CGG | - | chr3.4:83989037-83989056 | MS.gene013566:intron | 40.0% |
| ! | TTTTCCTACCTGGTCAAGTA+TGG | - | chr3.4:83989186-83989205 | MS.gene013566:intron | 40.0% |
| !! | ATCAGAAACGAAAGCGTTGA+CGG | - | chr3.4:83988136-83988155 | MS.gene013566:intron | 40.0% |
| !! | ATTCACGGATTTGCTAGAGA+GGG | - | chr3.4:83991048-83991067 | MS.gene013566:intron | 40.0% |
| !! | CAGCTCTTTTGTTTACGAAG+AGG | - | chr3.4:83989699-83989718 | MS.gene013566:intron | 40.0% |
| !! | CATTTTTAGGCCAATTGCTG+AGG | + | chr3.4:83991407-83991426 | None:intergenic | 40.0% |
| !! | GGAGAGTACTGAATTAGATG+AGG | - | chr3.4:83988195-83988214 | MS.gene013566:intron | 40.0% |
| !! | GTAGAAAGATGGTGGAAACT+AGG | - | chr3.4:83988755-83988774 | MS.gene013566:intron | 40.0% |
| !! | TGATTGATTTTGCTGTCTCG+TGG | - | chr3.4:83991998-83992017 | MS.gene013566:intron | 40.0% |
| !!! | ATGCAGTCATTTTTCCTACC+TGG | - | chr3.4:83989176-83989195 | MS.gene013566:intron | 40.0% |
| AAATGACGGCTCGTGCTAAA+TGG | - | chr3.4:83988365-83988384 | MS.gene013566:CDS | 45.0% | |
| ACGGCTTATTAGCTCACCAA+AGG | + | chr3.4:83989394-83989413 | None:intergenic | 45.0% | |
| AGATGCAAGAGAGATGCAAG+TGG | + | chr3.4:83991607-83991626 | None:intergenic | 45.0% | |
| AGGCTTAGCTTAGGTGGTTT+GGG | - | chr3.4:83988775-83988794 | MS.gene013566:intron | 45.0% | |
| AGTATGGTTATCTCGCTGTG+CGG | - | chr3.4:83989202-83989221 | MS.gene013566:intron | 45.0% | |
| ATGCCTTATCCCACCAAATG+AGG | + | chr3.4:83988995-83989014 | None:intergenic | 45.0% | |
| ATGTAGCCAACCTCATTTGG+TGG | - | chr3.4:83988982-83989001 | MS.gene013566:intron | 45.0% | |
| ATTGGTGGGATGTCTTCAAG+TGG | - | chr3.4:83989889-83989908 | MS.gene013566:intron | 45.0% | |
| CATCCCACCAATCTAACTAC+TGG | + | chr3.4:83989881-83989900 | None:intergenic | 45.0% | |
| CGAGATAACCATACTTGACC+AGG | + | chr3.4:83989197-83989216 | None:intergenic | 45.0% | |
| CTAACTACTGGAGAGACATC+AGG | + | chr3.4:83989869-83989888 | None:intergenic | 45.0% | |
| CTCTCCAGTAGTTAGATTGG+TGG | - | chr3.4:83989874-83989893 | MS.gene013566:intron | 45.0% | |
| CTCTCTAGCAAATCCGTGAA+TGG | + | chr3.4:83991049-83991068 | None:intergenic | 45.0% | |
| CTTATCCCACCAAATGAGGT+TGG | + | chr3.4:83988991-83989010 | None:intergenic | 45.0% | |
| GAAACTAGGCTTAGCTTAGG+TGG | - | chr3.4:83988769-83988788 | MS.gene013566:intron | 45.0% | |
| GAGGATAGTCAGGTCACTAA+AGG | - | chr3.4:83988849-83988868 | MS.gene013566:intron | 45.0% | |
| GATAAGGCATGGTTGTGTAG+TGG | - | chr3.4:83989005-83989024 | MS.gene013566:intron | 45.0% | |
| GATGCAAGAGAGATGCAAGT+GGG | + | chr3.4:83991606-83991625 | None:intergenic | 45.0% | |
| GCTTGCCTACAGAAAGTTGA+AGG | + | chr3.4:83989277-83989296 | None:intergenic | 45.0% | |
| GGGATTTCCATCTGCACTAT+TGG | - | chr3.4:83992248-83992267 | MS.gene013566:CDS | 45.0% | |
| GTGACATCTGTAGTTCGAAG+TGG | - | chr3.4:83992574-83992593 | MS.gene013566:CDS | 45.0% | |
| GTGGAAACTAGGCTTAGCTT+AGG | - | chr3.4:83988766-83988785 | MS.gene013566:intron | 45.0% | |
| TACTTCTGCATTGCATCCTC+AGG | + | chr3.4:83989325-83989344 | None:intergenic | 45.0% | |
| TAGGCTTAGCTTAGGTGGTT+TGG | - | chr3.4:83988774-83988793 | MS.gene013566:intron | 45.0% | |
| TCCATGTAGCCAACCTCATT+TGG | - | chr3.4:83988979-83988998 | MS.gene013566:intron | 45.0% | |
| TCGCTGTGCGGTAAAAAGAA+AGG | - | chr3.4:83989214-83989233 | MS.gene013566:intron | 45.0% | |
| TGGGCTTGTAGAGAGAAGAA+CGG | - | chr3.4:83988794-83988813 | MS.gene013566:intron | 45.0% | |
| TGTAGCCAACCTCATTTGGT+GGG | - | chr3.4:83988983-83989002 | MS.gene013566:intron | 45.0% | |
| ! | ACCAAATGAGGTTGGCTACA+TGG | + | chr3.4:83988983-83989002 | None:intergenic | 45.0% |
| ! | AGCTTTTGCGCCAAAATCAC+GGG | - | chr3.4:83989038-83989057 | MS.gene013566:intron | 45.0% |
| ! | CAACCTCATTTGGTGGGATA+AGG | - | chr3.4:83988989-83989008 | MS.gene013566:intron | 45.0% |
| ! | GTGAGATTGATTCTCTACGG+AGG | - | chr3.4:83989959-83989978 | MS.gene013566:intron | 45.0% |
| ! | GTTTGGATGAGCGGTTAGTT+TGG | - | chr3.4:83988668-83988687 | MS.gene013566:intron | 45.0% |
| ! | TCATTTGGTGGGATAAGGCA+TGG | - | chr3.4:83988994-83989013 | MS.gene013566:intron | 45.0% |
| ! | TGATGATGATTGGGAAGGTG+TGG | - | chr3.4:83988174-83988193 | MS.gene013566:intron | 45.0% |
| !! | CATTCACGGATTTGCTAGAG+AGG | - | chr3.4:83991047-83991066 | MS.gene013566:intron | 45.0% |
| !!! | CTGCTTTTTGCAAAGCAGCT+TGG | - | chr3.4:83990158-83990177 | MS.gene013566:intron | 45.0% |
| !! | TAAAAATAATAAATTATTGT+AGG | + | chr3.4:83990085-83990104 | None:intergenic | 5.0% |
| AATGTCACAGAGCTGCTGGT+TGG | - | chr3.4:83992160-83992179 | MS.gene013566:CDS | 50.0% | |
| AGGCAAGCGTGGCAGAAATT+GGG | - | chr3.4:83989289-83989308 | MS.gene013566:intron | 50.0% | |
| AGTCAGGTCACTAAAGGGAG+AGG | - | chr3.4:83988855-83988874 | MS.gene013566:intron | 50.0% | |
| CAACTTTCTGTAGGCAAGCG+TGG | - | chr3.4:83989278-83989297 | MS.gene013566:intron | 50.0% | |
| CACGTAACAGCGTAATGCAG+TGG | + | chr3.4:83992474-83992493 | None:intergenic | 50.0% | |
| CAGAGAAGTAAAACCGGCGA+CGG | - | chr3.4:83989631-83989650 | MS.gene013566:intron | 50.0% | |
| CAGCTCCCCTATCTAATGAC+AGG | - | chr3.4:83990035-83990054 | MS.gene013566:intron | 50.0% | |
| CCAGCAGCTCTGTGACATTA+AGG | + | chr3.4:83992159-83992178 | None:intergenic | 50.0% | |
| CCTTAATGTCACAGAGCTGC+TGG | - | chr3.4:83992156-83992175 | MS.gene013566:CDS | 50.0% | |
| GAAGGTTGAGCCGTACTACA+AGG | + | chr3.4:83988337-83988356 | None:intergenic | 50.0% | |
| GAGCTGAATACTGGTCCCAT+TGG | + | chr3.4:83989685-83989704 | None:intergenic | 50.0% | |
| GATGGCCATGCGTCACTAAT+TGG | - | chr3.4:83989792-83989811 | MS.gene013566:intron | 50.0% | |
| GGAAAAAACACACGCGGCAT+CGG | + | chr3.4:83990773-83990792 | None:intergenic | 50.0% | |
| GTAAGACTAGAGAAGGGGAG+AGG | + | chr3.4:83989987-83990006 | None:intergenic | 50.0% | |
| TAACGGTCCCGATTCTTAGG+AGG | - | chr3.4:83989918-83989937 | MS.gene013566:intron | 50.0% | |
| TAGGCAAGCGTGGCAGAAAT+TGG | - | chr3.4:83989288-83989307 | MS.gene013566:intron | 50.0% | |
| TATGTGCAGACAGTGAAGGC+CGG | - | chr3.4:83992101-83992120 | MS.gene013566:intron | 50.0% | |
| TGCAGATGGAAATCCCCTGA+AGG | + | chr3.4:83992244-83992263 | None:intergenic | 50.0% | |
| TTCTGCATTGCATCCTCAGG+AGG | + | chr3.4:83989322-83989341 | None:intergenic | 50.0% | |
| ! | AGCCATAACCGACTCAGCTT+CGG | + | chr3.4:83988104-83988123 | None:intergenic | 50.0% |
| ! | AGGATGACAAAAGCGCGACA+AGG | + | chr3.4:83990706-83990725 | None:intergenic | 50.0% |
| ! | ATGGTGAGTCCCCGTGATTT+TGG | + | chr3.4:83989051-83989070 | None:intergenic | 50.0% |
| ! | GCTTTTGCGCCAAAATCACG+GGG | - | chr3.4:83989039-83989058 | MS.gene013566:intron | 50.0% |
| !! | AAACGAAAGCGTTGACGGTG+GGG | - | chr3.4:83988141-83988160 | MS.gene013566:intron | 50.0% |
| !! | AGAAACGAAAGCGTTGACGG+TGG | - | chr3.4:83988139-83988158 | MS.gene013566:intron | 50.0% |
| !! | ATTTTGCTGTCTCGTGGCAG+AGG | - | chr3.4:83992004-83992023 | MS.gene013566:intron | 50.0% |
| !! | GAAACGAAAGCGTTGACGGT+GGG | - | chr3.4:83988140-83988159 | MS.gene013566:intron | 50.0% |
| !! | GCCGTCATTTTGAGAGGAGA+AGG | + | chr3.4:83988355-83988374 | None:intergenic | 50.0% |
| !! | TTGGCTTGATGGTGCACCTT+TGG | - | chr3.4:83989375-83989394 | MS.gene013566:intron | 50.0% |
| ACGGGGACTCACCATGATTC+TGG | - | chr3.4:83989056-83989075 | MS.gene013566:intron | 55.0% | |
| AGAAGTAAAACCGGCGACGG+TGG | - | chr3.4:83989634-83989653 | MS.gene013566:intron | 55.0% | |
| AGCCGAAGCTGAGTCGGTTA+TGG | - | chr3.4:83988099-83988118 | MS.gene013566:intron | 55.0% | |
| AGTGACGCATGGCCATCTAC+AGG | + | chr3.4:83989789-83989808 | None:intergenic | 55.0% | |
| ATCGTGTGAAACGACGGCGT+TGG | + | chr3.4:83988032-83988051 | None:intergenic | 55.0% | |
| GACGACGTCGTTTCTGATCC+CGG | - | chr3.4:83988064-83988083 | MS.gene013566:intron | 55.0% | |
| GAGTCGGTTATGGCTGAGCA+AGG | - | chr3.4:83988109-83988128 | MS.gene013566:intron | 55.0% | |
| GGTGCACCATCAAGCCAAGT+AGG | + | chr3.4:83989373-83989392 | None:intergenic | 55.0% | |
| GTGGCCGTTTATGCAGCATG+AGG | - | chr3.4:83992593-83992612 | MS.gene013566:CDS | 55.0% | |
| TCGACACCTTCTGCGAAAGC+CGG | + | chr3.4:83988264-83988283 | None:intergenic | 55.0% | |
| ! | AACCGACTCAGCTTCGGCTT+CGG | + | chr3.4:83988098-83988117 | None:intergenic | 55.0% |
| ! | ATTGGGTGCTATGCCTCCTG+AGG | - | chr3.4:83989306-83989325 | MS.gene013566:intron | 55.0% |
| !! | GCACGAGCCGTCATTTTGAG+AGG | + | chr3.4:83988361-83988380 | None:intergenic | 55.0% |
| ACTCAGCTTCGGCTTCGGGA+CGG | + | chr3.4:83988093-83988112 | None:intergenic | 60.0% | |
| AGTAAAACCGGCGACGGTGG+TGG | - | chr3.4:83989637-83989656 | MS.gene013566:intron | 60.0% | |
| CGATCCACAGCCCAGTGTAG+CGG | + | chr3.4:83992130-83992149 | None:intergenic | 60.0% | |
| CTACACTGGGCTGTGGATCG+TGG | - | chr3.4:83992130-83992149 | MS.gene013566:intron | 60.0% | |
| GTCCCCGAGCCTCTGAACTT+GGG | + | chr3.4:83989663-83989682 | None:intergenic | 60.0% | |
| GTGGCCCAAGTTCAGAGGCT+CGG | - | chr3.4:83989656-83989675 | MS.gene013566:intron | 60.0% | |
| TCAGAGGCTCGGGGACCAAT+GGG | - | chr3.4:83989667-83989686 | MS.gene013566:intron | 60.0% | |
| TCCCGAAGCCGAAGCTGAGT+CGG | - | chr3.4:83988093-83988112 | MS.gene013566:intron | 60.0% | |
| TGGCCCAAGTTCAGAGGCTC+GGG | - | chr3.4:83989657-83989676 | MS.gene013566:intron | 60.0% | |
| TTCAGAGGCTCGGGGACCAA+TGG | - | chr3.4:83989666-83989685 | MS.gene013566:intron | 60.0% | |
| ! | ACCGACTCAGCTTCGGCTTC+GGG | + | chr3.4:83988097-83988116 | None:intergenic | 60.0% |
| ! | TCACAGAGCTGCTGGTTGGC+AGG | - | chr3.4:83992164-83992183 | MS.gene013566:CDS | 60.0% |
| AAGGCCGGACACCGCTACAC+TGG | - | chr3.4:83992116-83992135 | MS.gene013566:intron | 65.0% | |
| AGGCCGGACACCGCTACACT+GGG | - | chr3.4:83992117-83992136 | MS.gene013566:intron | 65.0% | |
| CAGCCCAGTGTAGCGGTGTC+CGG | + | chr3.4:83992123-83992142 | None:intergenic | 65.0% | |
| CTTCTGCGAAAGCCGGTCCG+CGG | + | chr3.4:83988257-83988276 | None:intergenic | 65.0% | |
| GACACCGCTACACTGGGCTG+TGG | - | chr3.4:83992123-83992142 | MS.gene013566:intron | 65.0% | |
| GGCCCAAGTTCAGAGGCTCG+GGG | - | chr3.4:83989658-83989677 | MS.gene013566:intron | 65.0% | |
| GGTCCCCGAGCCTCTGAACT+TGG | + | chr3.4:83989664-83989683 | None:intergenic | 65.0% | |
| TTCGGCTTCGGGACGGTGTC+CGG | + | chr3.4:83988086-83988105 | None:intergenic | 65.0% | |
| ! | CGGTGGTGGCCCAAGTTCAG+AGG | - | chr3.4:83989651-83989670 | MS.gene013566:intron | 65.0% |
| ! | TTTTGTTGCTGCCGCCGCCG+CGG | - | chr3.4:83988237-83988256 | MS.gene013566:intron | 65.0% |
| ACTTGGGCCACCACCGTCGC+CGG | + | chr3.4:83989647-83989666 | None:intergenic | 70.0% | |
| TCGGCTTCGGGACGGTGTCC+GGG | + | chr3.4:83988085-83988104 | None:intergenic | 70.0% | |
| ! | CGCGGACCGGCTTTCGCAGA+AGG | - | chr3.4:83988255-83988274 | MS.gene013566:intron | 70.0% |
| CTGCGAAAGCCGGTCCGCGG+CGG | + | chr3.4:83988254-83988273 | None:intergenic | 75.0% | |
| ! | CGAAAGCCGGTCCGCGGCGG+CGG | + | chr3.4:83988251-83988270 | None:intergenic | 80.0% |
| ! | TTGCTGCCGCCGCCGCGGAC+CGG | - | chr3.4:83988242-83988261 | MS.gene013566:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 83987890 | 83992629 | 83987890 | ID=MS.gene013566 |
| chr3.4 | mRNA | 83987890 | 83992629 | 83987890 | ID=MS.gene013566.t1;Parent=MS.gene013566 |
| chr3.4 | exon | 83992133 | 83992629 | 83992133 | ID=MS.gene013566.t1.exon1;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83992133 | 83992629 | 83992133 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| chr3.4 | exon | 83991123 | 83991228 | 83991123 | ID=MS.gene013566.t1.exon2;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83991123 | 83991228 | 83991123 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| chr3.4 | exon | 83990782 | 83990885 | 83990782 | ID=MS.gene013566.t1.exon3;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83990782 | 83990885 | 83990782 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| chr3.4 | exon | 83989393 | 83989484 | 83989393 | ID=MS.gene013566.t1.exon4;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83989393 | 83989484 | 83989393 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| chr3.4 | exon | 83988312 | 83988409 | 83988312 | ID=MS.gene013566.t1.exon5;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83988312 | 83988409 | 83988312 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| chr3.4 | exon | 83987890 | 83988066 | 83987890 | ID=MS.gene013566.t1.exon6;Parent=MS.gene013566.t1 |
| chr3.4 | CDS | 83987890 | 83988066 | 83987890 | ID=cds.MS.gene013566.t1;Parent=MS.gene013566.t1 |
| Gene Sequence |
| Protein sequence |
