Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06683.t1 | XP_013461433.1 | 99.2 | 357 | 3 | 0 | 1 | 357 | 1 | 357 | 9.50E-167 | 596.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06683.t1 | Q9STP8 | 64.0 | 283 | 101 | 1 | 6 | 288 | 3 | 284 | 7.5e-96 | 352.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06683.t1 | A0A072V293 | 99.2 | 357 | 3 | 0 | 1 | 357 | 1 | 357 | 6.9e-167 | 596.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057128 | MS.gene06683 | 0.990286 | 6.43E-182 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06683 | MS.gene006943 | PPI |
| MS.gene06683 | MS.gene79129 | PPI |
| MS.gene06683 | MS.gene50290 | PPI |
| MS.gene06683 | MS.gene64797 | PPI |
| MS.gene50288 | MS.gene06683 | PPI |
| MS.gene06194 | MS.gene06683 | PPI |
| MS.gene06683 | MS.gene059375 | PPI |
| MS.gene06683 | MS.gene67470 | PPI |
| MS.gene59495 | MS.gene06683 | PPI |
| MS.gene06683 | MS.gene066614 | PPI |
| MS.gene06683 | MS.gene67707 | PPI |
| MS.gene06683 | MS.gene37513 | PPI |
| MS.gene06683 | MS.gene059523 | PPI |
| MS.gene06683 | MS.gene20177 | PPI |
| MS.gene049002 | MS.gene06683 | PPI |
| MS.gene06683 | MS.gene75574 | PPI |
| MS.gene06683 | MS.gene67472 | PPI |
| MS.gene06683 | MS.gene045231 | PPI |
| MS.gene06683 | MS.gene55865 | PPI |
| MS.gene067034 | MS.gene06683 | PPI |
| MS.gene06683 | MS.gene99124 | PPI |
| MS.gene06683 | MS.gene99073 | PPI |
| MS.gene06683 | MS.gene006945 | PPI |
| MS.gene06683 | MS.gene006947 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06683.t1 | MTR_3g491870 | 98.880 | 357 | 4 | 0 | 1 | 357 | 1 | 357 | 0.0 | 735 |
| MS.gene06683.t1 | MTR_1g418545 | 38.462 | 130 | 66 | 3 | 101 | 219 | 165 | 291 | 1.81e-24 | 102 |
| MS.gene06683.t1 | MTR_5g043640 | 42.268 | 97 | 56 | 0 | 240 | 336 | 126 | 222 | 1.60e-16 | 78.6 |
| MS.gene06683.t1 | MTR_5g043640 | 33.945 | 109 | 69 | 1 | 241 | 346 | 94 | 202 | 2.61e-14 | 72.4 |
| MS.gene06683.t1 | MTR_5g043640 | 43.023 | 86 | 49 | 0 | 253 | 338 | 73 | 158 | 2.41e-13 | 69.3 |
| MS.gene06683.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 113 | 218 | 9.07e-16 | 76.3 |
| MS.gene06683.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 193 | 298 | 3.56e-15 | 75.9 |
| MS.gene06683.t1 | MTR_6g027840 | 32.394 | 142 | 88 | 2 | 210 | 345 | 333 | 472 | 3.26e-14 | 73.9 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 3.04e-12 | 66.6 |
| MS.gene06683.t1 | MTR_3g088410 | 33.696 | 92 | 61 | 0 | 238 | 329 | 21 | 112 | 3.26e-12 | 64.3 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 4.12e-12 | 67.0 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.11e-12 | 66.6 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.52e-12 | 66.6 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 8.61e-12 | 66.6 |
| MS.gene06683.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 8.85e-12 | 66.2 |
| MS.gene06683.t1 | MTR_5g023090 | 28.221 | 163 | 102 | 3 | 194 | 343 | 272 | 432 | 1.13e-11 | 66.2 |
| MS.gene06683.t1 | MTR_5g022050 | 33.000 | 100 | 65 | 1 | 244 | 343 | 301 | 398 | 3.40e-11 | 64.7 |
| MS.gene06683.t1 | MTR_5g077770 | 39.326 | 89 | 54 | 0 | 245 | 333 | 563 | 651 | 5.05e-11 | 64.7 |
| MS.gene06683.t1 | MTR_7g113200 | 32.653 | 98 | 62 | 1 | 106 | 199 | 13 | 110 | 6.27e-11 | 63.9 |
| MS.gene06683.t1 | MTR_5g026740 | 44.444 | 72 | 40 | 0 | 120 | 191 | 11 | 82 | 7.32e-11 | 58.5 |
| MS.gene06683.t1 | MTR_7g113200 | 33.684 | 95 | 59 | 1 | 109 | 199 | 16 | 110 | 9.93e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06683.t1 | AT4G27780 | 64.205 | 352 | 113 | 4 | 6 | 351 | 3 | 347 | 5.01e-154 | 437 |
| MS.gene06683.t1 | AT5G53470 | 61.714 | 350 | 118 | 4 | 6 | 355 | 3 | 336 | 1.65e-142 | 407 |
| MS.gene06683.t1 | AT4G27780 | 63.670 | 267 | 84 | 4 | 6 | 266 | 3 | 262 | 8.56e-105 | 308 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.63e-25 | 105 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.66e-25 | 105 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 4.02e-25 | 104 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 4.02e-25 | 104 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 4.02e-25 | 104 |
| MS.gene06683.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 4.02e-25 | 104 |
| MS.gene06683.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 9.48e-15 | 75.9 |
| MS.gene06683.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.39e-14 | 75.5 |
| MS.gene06683.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.41e-14 | 75.5 |
| MS.gene06683.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.54e-14 | 75.5 |
| MS.gene06683.t1 | AT2G03430 | 36.082 | 97 | 62 | 0 | 240 | 336 | 119 | 215 | 7.32e-14 | 70.9 |
| MS.gene06683.t1 | AT2G03430 | 44.444 | 81 | 45 | 0 | 258 | 338 | 71 | 151 | 2.12e-13 | 69.7 |
| MS.gene06683.t1 | AT2G03430 | 30.328 | 122 | 79 | 2 | 241 | 356 | 87 | 208 | 5.13e-12 | 65.5 |
| MS.gene06683.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 2.10e-13 | 72.0 |
| MS.gene06683.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 2.10e-13 | 72.0 |
| MS.gene06683.t1 | AT5G37500 | 41.111 | 90 | 53 | 0 | 245 | 334 | 539 | 628 | 6.13e-12 | 67.4 |
| MS.gene06683.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 184 | 286 | 1.52e-11 | 65.1 |
| MS.gene06683.t1 | AT5G40160 | 36.893 | 103 | 61 | 2 | 240 | 342 | 192 | 290 | 1.63e-11 | 65.1 |
| MS.gene06683.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.08e-11 | 64.7 |
| MS.gene06683.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.08e-11 | 64.7 |
| MS.gene06683.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.08e-11 | 64.7 |
| MS.gene06683.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 230 | 332 | 2.42e-11 | 64.7 |
| MS.gene06683.t1 | AT5G66055 | 41.558 | 77 | 45 | 0 | 267 | 343 | 323 | 399 | 2.76e-11 | 65.1 |
| MS.gene06683.t1 | AT2G17390 | 32.039 | 103 | 70 | 0 | 241 | 343 | 224 | 326 | 5.49e-11 | 63.5 |
Find 92 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTCCTTTATAGGAAAA+TGG | 0.210754 | 3.3:-76544359 | MS.gene06683:intron |
| TAGGCAAGCGTGGCAGAAAT+TGG | 0.241228 | 3.3:-76546091 | MS.gene06683:CDS |
| TTCGGCTTCGGGACGGTGTC+CGG | 0.281477 | 3.3:+76547301 | None:intergenic |
| GATGTTCAGCTTCAGCTTTA+TGG | 0.297104 | 3.3:-76547098 | MS.gene06683:CDS |
| ATGTTCAGCTTCAGCTTTAT+GGG | 0.299378 | 3.3:-76547097 | MS.gene06683:CDS |
| AAATGACGGCTCGTGCTAAA+TGG | 0.312096 | 3.3:-76547019 | MS.gene06683:intron |
| CCAGCAGCTCTGTGACATTA+AGG | 0.334693 | 3.3:+76543223 | None:intergenic |
| ACCGACTCAGCTTCGGCTTC+GGG | 0.342493 | 3.3:+76547290 | None:intergenic |
| GGTCCCCGAGCCTCTGAACT+TGG | 0.355498 | 3.3:+76545718 | None:intergenic |
| TTGGCTTGATGGTGCACCTT+TGG | 0.364530 | 3.3:-76546004 | MS.gene06683:intron |
| CTATATCCTACTTGGCTTGA+TGG | 0.365767 | 3.3:-76546015 | MS.gene06683:CDS |
| AACCGACTCAGCTTCGGCTT+CGG | 0.381980 | 3.3:+76547289 | None:intergenic |
| TTGCTGCTGCCGCCGCGGAC+CGG | 0.402492 | 3.3:-76547142 | MS.gene06683:CDS |
| ATGATGATTATGATGATGAT+TGG | 0.403312 | 3.3:-76547220 | MS.gene06683:CDS |
| TGGCCCAAGTTCAGAGGCTC+GGG | 0.411198 | 3.3:-76545722 | MS.gene06683:CDS |
| AGCCGAAGCTGAGTCGGTTA+TGG | 0.416065 | 3.3:-76547285 | MS.gene06683:CDS |
| TCTTCCTCATGCTGCATAAA+CGG | 0.428588 | 3.3:+76542782 | None:intergenic |
| TAAACAAAAGAGCTGAATAC+TGG | 0.450530 | 3.3:+76545688 | None:intergenic |
| AGGAAAATGGATGCCATTCA+CGG | 0.450994 | 3.3:-76544346 | MS.gene06683:CDS |
| ATCAGAAACGAAAGCGTTGA+CGG | 0.451724 | 3.3:-76547248 | MS.gene06683:CDS |
| CAGCCCAGTGTAGCGGTGTC+CGG | 0.452667 | 3.3:+76543259 | None:intergenic |
| TCGGCTTCGGGACGGTGTCC+GGG | 0.456211 | 3.3:+76547302 | None:intergenic |
| AAATGGGTGAATGGCATGAT+TGG | 0.457260 | 3.3:-76547496 | MS.gene06683:CDS |
| CTACTAAAGTGTATCGAAAG+TGG | 0.458537 | 3.3:-76544295 | MS.gene06683:CDS |
| CGCGGACCGGCTTTCGCAGA+AGG | 0.462676 | 3.3:-76547129 | MS.gene06683:CDS |
| TGCCATCATTGTCTTCTGAA+TGG | 0.466803 | 3.3:+76542837 | None:intergenic |
| TCACAGAGCTGCTGGTTGGC+AGG | 0.467967 | 3.3:-76543215 | MS.gene06683:CDS |
| CTCTCTAGCAAATCCGTGAA+TGG | 0.469964 | 3.3:+76544333 | None:intergenic |
| TTCAGAGGCTCGGGGACCAA+TGG | 0.472100 | 3.3:-76545713 | MS.gene06683:CDS |
| AAGGCCGGACACCGCTACAC+TGG | 0.472472 | 3.3:-76543263 | MS.gene06683:CDS |
| TGATGATTATGATGATGATT+GGG | 0.475622 | 3.3:-76547219 | MS.gene06683:CDS |
| TACTTCTGCATTGCATCCTC+AGG | 0.475742 | 3.3:+76546057 | None:intergenic |
| GTGGCCCAAGTTCAGAGGCT+CGG | 0.480788 | 3.3:-76545723 | MS.gene06683:CDS |
| CCTTAATGTCACAGAGCTGC+TGG | 0.483735 | 3.3:-76543223 | MS.gene06683:CDS |
| TGTCGGAACTATATCCTACT+TGG | 0.487009 | 3.3:-76546023 | MS.gene06683:CDS |
| TGGAGTTTCAGTGAATTTGA+AGG | 0.487800 | 3.3:-76544275 | MS.gene06683:CDS |
| GAAACGAAAGCGTTGACGGT+GGG | 0.490532 | 3.3:-76547244 | MS.gene06683:CDS |
| CTTTGACAGAGAAGTAAAAC+CGG | 0.501146 | 3.3:-76545754 | MS.gene06683:intron |
| TCAGAGGCTCGGGGACCAAT+GGG | 0.511058 | 3.3:-76545712 | MS.gene06683:CDS |
| AGGCAAGCGTGGCAGAAATT+GGG | 0.512730 | 3.3:-76546090 | MS.gene06683:CDS |
| TACTGAAGGTCCTTGTAGTA+CGG | 0.514723 | 3.3:-76547060 | MS.gene06683:CDS |
| GTCCCCGAGCCTCTGAACTT+GGG | 0.519979 | 3.3:+76545719 | None:intergenic |
| AGCCATAACCGACTCAGCTT+CGG | 0.524028 | 3.3:+76547283 | None:intergenic |
| CTTCACCAAGTATTCAGCTA+TGG | 0.524917 | 3.3:+76542874 | None:intergenic |
| AGAATCCATAGCTGAATACT+TGG | 0.526526 | 3.3:-76542879 | MS.gene06683:CDS |
| AGTAAAACCGGCGACGGTGG+TGG | 0.531277 | 3.3:-76545742 | MS.gene06683:CDS |
| ACTTGGGCCACCACCGTCGC+CGG | 0.539075 | 3.3:+76545735 | None:intergenic |
| GAGCTGAATACTGGTCCCAT+TGG | 0.543058 | 3.3:+76545697 | None:intergenic |
| CAACTTTCTGTAGGCAAGCG+TGG | 0.544482 | 3.3:-76546101 | MS.gene06683:intron |
| GACACCGCTACACTGGGCTG+TGG | 0.545393 | 3.3:-76543256 | MS.gene06683:CDS |
| CTGCGAAAGCCGGTCCGCGG+CGG | 0.545771 | 3.3:+76547133 | None:intergenic |
| TGATGATGATTGGGAAGGTG+TGG | 0.546547 | 3.3:-76547210 | MS.gene06683:CDS |
| GGAGTTTCAGTGAATTTGAA+GGG | 0.548533 | 3.3:-76544274 | MS.gene06683:intron |
| GACGACGTCGTTTATGATCC+CGG | 0.551665 | 3.3:-76547320 | MS.gene06683:CDS |
| GAAGGTTGAGCCGTACTACA+AGG | 0.554732 | 3.3:+76547050 | None:intergenic |
| CTACACTGGGCTGTGGATCG+TGG | 0.555327 | 3.3:-76543249 | MS.gene06683:CDS |
| AGGCCGGACACCGCTACACT+GGG | 0.560736 | 3.3:-76543262 | MS.gene06683:CDS |
| TCGACACCTTCTGCGAAAGC+CGG | 0.563972 | 3.3:+76547123 | None:intergenic |
| CGGTGGTGGCCCAAGTTCAG+AGG | 0.566168 | 3.3:-76545728 | MS.gene06683:CDS |
| AAACGAAAGCGTTGACGGTG+GGG | 0.575349 | 3.3:-76547243 | MS.gene06683:CDS |
| GGTGCACCATCAAGCCAAGT+AGG | 0.576322 | 3.3:+76546009 | None:intergenic |
| ATCGTGTGAAACGACGGCGT+TGG | 0.582169 | 3.3:+76547355 | None:intergenic |
| TGTATCATCGTGTGAAACGA+CGG | 0.586740 | 3.3:+76547349 | None:intergenic |
| TATGTGCAGACAGTGAAGGC+CGG | 0.586771 | 3.3:-76543278 | MS.gene06683:intron |
| TCCCGAAGCCGAAGCTGAGT+CGG | 0.589483 | 3.3:-76547291 | MS.gene06683:CDS |
| ACCTTCTCCTCTCAAAATGA+CGG | 0.595594 | 3.3:-76547033 | MS.gene06683:CDS |
| GAAATATGTGCAGACAGTGA+AGG | 0.596575 | 3.3:-76543282 | MS.gene06683:intron |
| ATCCATTCAGAAGACAATGA+TGG | 0.596681 | 3.3:-76542839 | MS.gene06683:CDS |
| TTCTGCATTGCATCCTCAGG+AGG | 0.597440 | 3.3:+76546060 | None:intergenic |
| ACTCAGCTTCGGCTTCGGGA+CGG | 0.601526 | 3.3:+76547294 | None:intergenic |
| CACGTAACAGCGTAATGCAG+TGG | 0.604125 | 3.3:+76542908 | None:intergenic |
| GTGACATCTGTAGTTCTAAG+TGG | 0.612750 | 3.3:-76542805 | MS.gene06683:CDS |
| AGAAGTAAAACCGGCGACGG+TGG | 0.613500 | 3.3:-76545745 | MS.gene06683:CDS |
| CTTCTGCGAAAGCCGGTCCG+CGG | 0.613659 | 3.3:+76547130 | None:intergenic |
| GTTGTTGAATGAAACGACGA+TGG | 0.619984 | 3.3:+76547409 | None:intergenic |
| AATGTCACAGAGCTGCTGGT+TGG | 0.620200 | 3.3:-76543219 | MS.gene06683:CDS |
| TTGTATAAGATTGCTACTGA+AGG | 0.622050 | 3.3:-76547074 | MS.gene06683:CDS |
| TTTGTTTACGAAGAGGAATG+TGG | 0.624188 | 3.3:-76545673 | MS.gene06683:CDS |
| GAAGTACATTGACATTGTGT+CGG | 0.625855 | 3.3:-76546040 | MS.gene06683:CDS |
| CATTCACGGATTTGCTAGAG+AGG | 0.627592 | 3.3:-76544332 | MS.gene06683:CDS |
| GAGTCGGTTATGGCTGAGCA+AGG | 0.627643 | 3.3:-76547275 | MS.gene06683:CDS |
| GAATGCTGATGTAAATGCCA+AGG | 0.631032 | 3.3:-76543193 | MS.gene06683:intron |
| ATTCACGGATTTGCTAGAGA+GGG | 0.635621 | 3.3:-76544331 | MS.gene06683:CDS |
| CGATCCACAGCCCAGTGTAG+CGG | 0.638544 | 3.3:+76543252 | None:intergenic |
| GGCCCAAGTTCAGAGGCTCG+GGG | 0.645540 | 3.3:-76545721 | MS.gene06683:CDS |
| GGTAAGAGAAGATTAAACCG+AGG | 0.648737 | 3.3:+76547450 | None:intergenic |
| GGAGAGTACTGAATTAGATG+AGG | 0.670681 | 3.3:-76547189 | MS.gene06683:CDS |
| CAGAGAAGTAAAACCGGCGA+CGG | 0.678218 | 3.3:-76545748 | MS.gene06683:CDS |
| AGAAACGAAAGCGTTGACGG+TGG | 0.679861 | 3.3:-76547245 | MS.gene06683:CDS |
| GATTATGATGATGATTGGGA+AGG | 0.681559 | 3.3:-76547215 | MS.gene06683:CDS |
| ATTGGGTGCTATGCCTCCTG+AGG | 0.688948 | 3.3:-76546073 | MS.gene06683:CDS |
| GTGGCCGTTTATGCAGCATG+AGG | 0.693675 | 3.3:-76542786 | MS.gene06683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTCCTT+GGG | - | chr3.3:76543444-76543463 | MS.gene06683:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTCCT+TGG | - | chr3.3:76543443-76543462 | MS.gene06683:intron | 10.0% |
| !! | AATGACATTATTTAAATGTA+CGG | - | chr3.3:76545763-76545782 | MS.gene06683:intron | 15.0% |
| !! | ATCATTTGTGTAAATAAAAA+AGG | + | chr3.3:76545628-76545647 | None:intergenic | 15.0% |
| !!! | AACATAAACTTAAATTTTAG+CGG | - | chr3.3:76546175-76546194 | MS.gene06683:intron | 15.0% |
| !!! | TTATTTTATCTTAAGTCTTT+TGG | - | chr3.3:76546085-76546104 | MS.gene06683:CDS | 15.0% |
| !! | AAACTAAGAAAAACTATAAG+AGG | - | chr3.3:76543766-76543785 | MS.gene06683:intron | 20.0% |
| !! | AATACAAATACATCCAAAAT+AGG | + | chr3.3:76543494-76543513 | None:intergenic | 20.0% |
| !! | ATAAATTCATAACCAATTAG+TGG | + | chr3.3:76544694-76544713 | None:intergenic | 20.0% |
| !! | ATAGGTCTTTATATATTACA+CGG | - | chr3.3:76544940-76544959 | MS.gene06683:intron | 20.0% |
| !! | ATTTGTGTAAATAAAAAAGG+TGG | + | chr3.3:76545625-76545644 | None:intergenic | 20.0% |
| !! | TTTCAAAGTTAAAACTAAGA+AGG | + | chr3.3:76545210-76545229 | None:intergenic | 20.0% |
| !!! | AGTCTTTTATTTTGAGAAAT+AGG | - | chr3.3:76544000-76544019 | MS.gene06683:intron | 20.0% |
| !!! | ATATGTATATTTCAGTGTTT+TGG | - | chr3.3:76546224-76546243 | MS.gene06683:intron | 20.0% |
| !!! | ATATTAATTTGATAAACCTC+TGG | + | chr3.3:76546910-76546929 | None:intergenic | 20.0% |
| !!! | ATTTTATTGAAGATTTAGAG+AGG | - | chr3.3:76543604-76543623 | MS.gene06683:intron | 20.0% |
| !!! | CACTATTTCTTTCTATAAAA+GGG | - | chr3.3:76544382-76544401 | MS.gene06683:intron | 20.0% |
| !!! | GCTAATTTTTTATAACTGAA+AGG | + | chr3.3:76546394-76546413 | None:intergenic | 20.0% |
| !!! | GGTTATTTTGTTAATTGTTT+TGG | - | chr3.3:76544122-76544141 | MS.gene06683:intron | 20.0% |
| !!! | TCACTATTTCTTTCTATAAA+AGG | - | chr3.3:76544381-76544400 | MS.gene06683:intron | 20.0% |
| ! | AACGCATATTGTTAAAGAAA+AGG | + | chr3.3:76546960-76546979 | None:intergenic | 25.0% |
| ! | AAGAATGCTGAAGATATTTA+TGG | + | chr3.3:76546861-76546880 | None:intergenic | 25.0% |
| ! | AATAAAAGACTTGTGTATGT+TGG | + | chr3.3:76543991-76544010 | None:intergenic | 25.0% |
| ! | AATATACATATGCTTGTGTT+AGG | + | chr3.3:76546215-76546234 | None:intergenic | 25.0% |
| ! | ACAAGATCAATCATTTCTTA+AGG | + | chr3.3:76546623-76546642 | None:intergenic | 25.0% |
| ! | AGAATGCTGAAGATATTTAT+GGG | + | chr3.3:76546860-76546879 | None:intergenic | 25.0% |
| ! | ATAAAGACCTATCATTAGAT+AGG | + | chr3.3:76544932-76544951 | None:intergenic | 25.0% |
| ! | ATAACAAGACAAATTTAGGA+AGG | + | chr3.3:76545151-76545170 | None:intergenic | 25.0% |
| ! | ATAACTGAATTGACATTACA+TGG | - | chr3.3:76546340-76546359 | MS.gene06683:intron | 25.0% |
| ! | ATCAAAAGGCAACAATTTAT+TGG | - | chr3.3:76545850-76545869 | MS.gene06683:intron | 25.0% |
| ! | CAAAATGCCAATAGTTTAAT+GGG | + | chr3.3:76545681-76545700 | None:intergenic | 25.0% |
| ! | GCATATAACAAGACAAATTT+AGG | + | chr3.3:76545155-76545174 | None:intergenic | 25.0% |
| ! | GGGTTAATAGTGTATATATT+TGG | - | chr3.3:76543371-76543390 | MS.gene06683:intron | 25.0% |
| ! | TAAAGACCTATCATTAGATA+GGG | + | chr3.3:76544931-76544950 | None:intergenic | 25.0% |
| ! | TAACAAGACAAATTTAGGAA+GGG | + | chr3.3:76545150-76545169 | None:intergenic | 25.0% |
| ! | TAATGAGTTAGATCGAAATA+TGG | - | chr3.3:76543813-76543832 | MS.gene06683:intron | 25.0% |
| ! | TAGAATACGCATAAAATCTT+TGG | - | chr3.3:76545432-76545451 | MS.gene06683:intron | 25.0% |
| ! | TATCTTCCTTTATAGGAAAA+TGG | - | chr3.3:76545907-76545926 | MS.gene06683:intron | 25.0% |
| ! | TCAAAAGGCAACAATTTATT+GGG | - | chr3.3:76545851-76545870 | MS.gene06683:intron | 25.0% |
| ! | TCAACTTTCTATCTTCAAAT+AGG | + | chr3.3:76546317-76546336 | None:intergenic | 25.0% |
| ! | TCTTCAAGTGGTAATTATAA+CGG | - | chr3.3:76544788-76544807 | MS.gene06683:intron | 25.0% |
| ! | TGCATAATGTAGTATAGTTT+AGG | - | chr3.3:76547232-76547251 | MS.gene06683:CDS | 25.0% |
| ! | TGTAGAAGACAATAAAAGAA+AGG | - | chr3.3:76543316-76543335 | MS.gene06683:intron | 25.0% |
| ! | TTTCATTACATCACACTATT+TGG | - | chr3.3:76546794-76546813 | MS.gene06683:intron | 25.0% |
| !! | AAAAATTATTGAGTTGCAGA+AGG | + | chr3.3:76545312-76545331 | None:intergenic | 25.0% |
| !! | AATTTGTCTTGTTATATGCT+AGG | - | chr3.3:76545156-76545175 | MS.gene06683:intron | 25.0% |
| !! | ACATTACGCAACAATTTTAA+AGG | - | chr3.3:76543350-76543369 | MS.gene06683:intron | 25.0% |
| !! | ACTATTGGCACTTTAAAAAT+GGG | - | chr3.3:76546545-76546564 | MS.gene06683:intron | 25.0% |
| !! | AGGTTACTTTATTAATCAGT+AGG | - | chr3.3:76545728-76545747 | MS.gene06683:CDS | 25.0% |
| !! | ATAGATTCTTTAGCCTATTT+TGG | - | chr3.3:76543478-76543497 | MS.gene06683:intron | 25.0% |
| !! | ATAGTATTGAATGAATACCT+TGG | + | chr3.3:76547093-76547112 | None:intergenic | 25.0% |
| !! | ATCTTCAAATAGGCATTTTT+AGG | + | chr3.3:76546307-76546326 | None:intergenic | 25.0% |
| !! | ATGATGATTATGATGATGAT+TGG | - | chr3.3:76543046-76543065 | MS.gene06683:intron | 25.0% |
| !! | CACTATTTCTTTCTATACAA+GGG | - | chr3.3:76544325-76544344 | MS.gene06683:CDS | 25.0% |
| !! | CATTACGCAACAATTTTAAA+GGG | - | chr3.3:76543351-76543370 | MS.gene06683:intron | 25.0% |
| !! | GCTTCTTTATCTTTTCTTAA+AGG | - | chr3.3:76545081-76545100 | MS.gene06683:intron | 25.0% |
| !! | TAACTGTTTAGAATGAAAAC+AGG | - | chr3.3:76547166-76547185 | MS.gene06683:CDS | 25.0% |
| !! | TCACTATTTCTTTCTATACA+AGG | - | chr3.3:76544324-76544343 | MS.gene06683:CDS | 25.0% |
| !! | TGATGATTATGATGATGATT+GGG | - | chr3.3:76543047-76543066 | MS.gene06683:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | - | chr3.3:76543833-76543852 | MS.gene06683:intron | 25.0% |
| !!! | AAATCTTTGGTTTGCTTTTA+TGG | - | chr3.3:76545445-76545464 | MS.gene06683:intron | 25.0% |
| !!! | CTGCAACTCAATAATTTTTT+TGG | - | chr3.3:76545313-76545332 | MS.gene06683:intron | 25.0% |
| !!! | GTTTTTTCCCATTAAACTAT+TGG | - | chr3.3:76545671-76545690 | MS.gene06683:CDS | 25.0% |
| !!! | TCTGATGTTTTCTTTTTTGA+AGG | - | chr3.3:76547318-76547337 | MS.gene06683:CDS | 25.0% |
| !!! | TCTTTTTTGAAGGATAATGA+TGG | - | chr3.3:76547328-76547347 | MS.gene06683:CDS | 25.0% |
| AAAAAAGGTGGTTCAAAAGA+AGG | + | chr3.3:76545613-76545632 | None:intergenic | 30.0% | |
| AAAGACCTATCATTAGATAG+GGG | + | chr3.3:76544930-76544949 | None:intergenic | 30.0% | |
| AACAAGACAAATTTAGGAAG+GGG | + | chr3.3:76545149-76545168 | None:intergenic | 30.0% | |
| ATGTAGTATAGTTTAGGCTT+TGG | - | chr3.3:76547238-76547257 | MS.gene06683:CDS | 30.0% | |
| CCAAAATGCCAATAGTTTAA+TGG | + | chr3.3:76545682-76545701 | None:intergenic | 30.0% | |
| CTGCTATTAAAAACTCATAG+AGG | + | chr3.3:76543421-76543440 | None:intergenic | 30.0% | |
| GATACACTCAAAGTGATAAT+AGG | - | chr3.3:76545184-76545203 | MS.gene06683:intron | 30.0% | |
| GGGAGAATGATGTATTTAAA+AGG | - | chr3.3:76544402-76544421 | MS.gene06683:intron | 30.0% | |
| GTCTTTATATATTACACGGT+TGG | - | chr3.3:76544944-76544963 | MS.gene06683:intron | 30.0% | |
| GTTTCGTTATCTTCCTTTAT+AGG | - | chr3.3:76545900-76545919 | MS.gene06683:intron | 30.0% | |
| TAAACAAAAGAGCTGAATAC+TGG | + | chr3.3:76544581-76544600 | None:intergenic | 30.0% | |
| TAAATTAACGTTTGGATGAG+CGG | - | chr3.3:76543551-76543570 | MS.gene06683:intron | 30.0% | |
| TCGTAGATCTCTACTAATTT+GGG | - | chr3.3:76546728-76546747 | MS.gene06683:intron | 30.0% | |
| TCTATTTGAACTTAAACCCA+AGG | + | chr3.3:76543463-76543482 | None:intergenic | 30.0% | |
| TGAAGGATAATGTATACACT+TGG | + | chr3.3:76546042-76546061 | None:intergenic | 30.0% | |
| TGATGATATCTTGGTTCATT+GGG | + | chr3.3:76545510-76545529 | None:intergenic | 30.0% | |
| TGTAGTATAGTTTAGGCTTT+GGG | - | chr3.3:76547239-76547258 | MS.gene06683:CDS | 30.0% | |
| TGTTGAAGACACTAAAGTTA+TGG | + | chr3.3:76546592-76546611 | None:intergenic | 30.0% | |
| TTACATGGAATTAATCTTGC+TGG | - | chr3.3:76546355-76546374 | MS.gene06683:intron | 30.0% | |
| TTATGTTGTCATACTGAAGT+CGG | + | chr3.3:76546162-76546181 | None:intergenic | 30.0% | |
| TTGTATAAGATTGCTACTGA+AGG | - | chr3.3:76543192-76543211 | MS.gene06683:intron | 30.0% | |
| TTTCAAATTTGAACAGAGCA+AGG | - | chr3.3:76545250-76545269 | MS.gene06683:intron | 30.0% | |
| TTTCTAAGCTTTGCATCATA+GGG | - | chr3.3:76545407-76545426 | MS.gene06683:intron | 30.0% | |
| ! | AGAAAAACCAGACATCATTT+TGG | - | chr3.3:76545002-76545021 | MS.gene06683:intron | 30.0% |
| ! | CACTATTGGCACTTTAAAAA+TGG | - | chr3.3:76546544-76546563 | MS.gene06683:intron | 30.0% |
| ! | CCATTAAACTATTGGCATTT+TGG | - | chr3.3:76545679-76545698 | MS.gene06683:CDS | 30.0% |
| ! | CTTCTTCAATCAATTTTCCT+CGG | - | chr3.3:76542799-76542818 | MS.gene06683:CDS | 30.0% |
| ! | TCAATTTAGAGCACAAGAAA+CGG | + | chr3.3:76544300-76544319 | None:intergenic | 30.0% |
| ! | TGTTTAGAATGAAAACAGGA+TGG | - | chr3.3:76547170-76547189 | MS.gene06683:CDS | 30.0% |
| ! | TTAAACTATTGGCATTTTGG+AGG | - | chr3.3:76545682-76545701 | MS.gene06683:CDS | 30.0% |
| ! | TTTAAATGTACGGAGTACTA+AGG | - | chr3.3:76545773-76545792 | MS.gene06683:intron | 30.0% |
| !!! | ATGTTTTAATGCATTCCTTC+AGG | - | chr3.3:76547113-76547132 | MS.gene06683:CDS | 30.0% |
| !!! | TGTTTTAATGCATTCCTTCA+GGG | - | chr3.3:76547114-76547133 | MS.gene06683:CDS | 30.0% |
| !!! | TTAGTTTTATCAAGCATGCT+TGG | + | chr3.3:76545544-76545563 | None:intergenic | 30.0% |
| AAACAGGATGGAACTTTAGT+TGG | - | chr3.3:76547182-76547201 | MS.gene06683:CDS | 35.0% | |
| AAATGACTGCATGCAATTGT+TGG | + | chr3.3:76544055-76544074 | None:intergenic | 35.0% | |
| AAGACAGACATAGCTCATTT+AGG | + | chr3.3:76546437-76546456 | None:intergenic | 35.0% | |
| AAGATTTAGAGAGGAAGTTG+GGG | - | chr3.3:76543613-76543632 | MS.gene06683:intron | 35.0% | |
| AAGGAGACAGATTAATGAGA+AGG | + | chr3.3:76545574-76545593 | None:intergenic | 35.0% | |
| AATATTGCTTTGTGGGTTTC+TGG | - | chr3.3:76545275-76545294 | MS.gene06683:intron | 35.0% | |
| AATTAAGCCAATAGTGCAGA+TGG | + | chr3.3:76547145-76547164 | None:intergenic | 35.0% | |
| AGAATCCATAGCTGAATACT+TGG | - | chr3.3:76547387-76547406 | MS.gene06683:CDS | 35.0% | |
| AGCTTAAGTGAAGAATTAGC+TGG | - | chr3.3:76546411-76546430 | MS.gene06683:intron | 35.0% | |
| AGGAGACAGATTAATGAGAA+GGG | + | chr3.3:76545573-76545592 | None:intergenic | 35.0% | |
| AGGATAGTCAGATCACTAAA+GGG | - | chr3.3:76543737-76543756 | MS.gene06683:intron | 35.0% | |
| AGTAGTGAGAGTAGATCAAA+TGG | - | chr3.3:76543714-76543733 | MS.gene06683:intron | 35.0% | |
| AGTGGGAGTGAAAGTTAAAA+TGG | + | chr3.3:76546476-76546495 | None:intergenic | 35.0% | |
| ATCCATTCAGAAGACAATGA+TGG | - | chr3.3:76547427-76547446 | MS.gene06683:CDS | 35.0% | |
| ATTATGCAACTTATGCAGTG+AGG | + | chr3.3:76547220-76547239 | None:intergenic | 35.0% | |
| CAAGGACAATATTGCTTTGT+GGG | - | chr3.3:76545268-76545287 | MS.gene06683:intron | 35.0% | |
| CATGTTACCAAAATGATGTC+TGG | + | chr3.3:76545012-76545031 | None:intergenic | 35.0% | |
| CTACTAAAGTGTATCGAAAG+TGG | - | chr3.3:76545971-76545990 | MS.gene06683:intron | 35.0% | |
| CTCGTAGATCTCTACTAATT+TGG | - | chr3.3:76546727-76546746 | MS.gene06683:intron | 35.0% | |
| CTCTGCTGTAAATTAACGTT+TGG | - | chr3.3:76543543-76543562 | MS.gene06683:intron | 35.0% | |
| CTTTGACAGAGAAGTAAAAC+CGG | - | chr3.3:76544512-76544531 | MS.gene06683:intron | 35.0% | |
| GAACCAAGATATCATCACTT+TGG | - | chr3.3:76545513-76545532 | MS.gene06683:intron | 35.0% | |
| GAAGATTTAGAGAGGAAGTT+GGG | - | chr3.3:76543612-76543631 | MS.gene06683:intron | 35.0% | |
| GAAGTACATTGACATTGTGT+CGG | - | chr3.3:76544226-76544245 | MS.gene06683:intron | 35.0% | |
| GCAAAAGATTCAGTCAACAA+AGG | + | chr3.3:76544896-76544915 | None:intergenic | 35.0% | |
| GGAGTTTCAGTGAATTTGAA+GGG | - | chr3.3:76545992-76546011 | MS.gene06683:intron | 35.0% | |
| GTATACCACAGATTCACTAT+TGG | - | chr3.3:76546530-76546549 | MS.gene06683:intron | 35.0% | |
| GTGATGATATCTTGGTTCAT+TGG | + | chr3.3:76545511-76545530 | None:intergenic | 35.0% | |
| GTTTCTAAGCTTTGCATCAT+AGG | - | chr3.3:76545406-76545425 | MS.gene06683:intron | 35.0% | |
| TAGATCTCTACTAATTTGGG+AGG | - | chr3.3:76546731-76546750 | MS.gene06683:intron | 35.0% | |
| TAGCACCTATAGTAGAAAGA+TGG | - | chr3.3:76543636-76543655 | MS.gene06683:intron | 35.0% | |
| TATACCCTTCAACTTTCTGT+AGG | - | chr3.3:76544156-76544175 | MS.gene06683:intron | 35.0% | |
| TCAAAGAAACAACACGAGTT+GGG | + | chr3.3:76544498-76544517 | None:intergenic | 35.0% | |
| TCTCTTGCATCTTTGTACTT+AGG | - | chr3.3:76546502-76546521 | MS.gene06683:intron | 35.0% | |
| TGAACAAAAGCTGCTAATGA+GGG | + | chr3.3:76546129-76546148 | None:intergenic | 35.0% | |
| TGAAGATTTAGAGAGGAAGT+TGG | - | chr3.3:76543611-76543630 | MS.gene06683:intron | 35.0% | |
| TGGAGTTTCAGTGAATTTGA+AGG | - | chr3.3:76545991-76546010 | MS.gene06683:intron | 35.0% | |
| TGTTAGAAGAGCCAAATCAA+AGG | + | chr3.3:76545476-76545495 | None:intergenic | 35.0% | |
| TTAATGGGAAAAAACACACG+TGG | + | chr3.3:76545666-76545685 | None:intergenic | 35.0% | |
| TTATGGAGAGTCCTTTGATT+TGG | - | chr3.3:76545462-76545481 | MS.gene06683:intron | 35.0% | |
| TTCCACCATCTTTCTACTAT+AGG | + | chr3.3:76543644-76543663 | None:intergenic | 35.0% | |
| TTCTAAGCTTTGCATCATAG+GGG | - | chr3.3:76545408-76545427 | MS.gene06683:intron | 35.0% | |
| TTGATAGACCTCCTAAGAAT+CGG | + | chr3.3:76544816-76544835 | None:intergenic | 35.0% | |
| TTGCATCTTTGTACTTAGGA+AGG | - | chr3.3:76546506-76546525 | MS.gene06683:intron | 35.0% | |
| TTTGTTTACGAAGAGGAATG+TGG | - | chr3.3:76544593-76544612 | MS.gene06683:intron | 35.0% | |
| ! | ATGTTCAGCTTCAGCTTTAT+GGG | - | chr3.3:76543169-76543188 | MS.gene06683:intron | 35.0% |
| ! | ATTTGAGATAGCCAGAATCA+TGG | + | chr3.3:76543957-76543976 | None:intergenic | 35.0% |
| ! | GAAGTGAGATTGATTCTCTA+CGG | - | chr3.3:76544843-76544862 | MS.gene06683:intron | 35.0% |
| ! | GATTATGATGATGATTGGGA+AGG | - | chr3.3:76543051-76543070 | MS.gene06683:intron | 35.0% |
| ! | TCTTGTTATATGCTAGGCTT+TGG | - | chr3.3:76545162-76545181 | MS.gene06683:intron | 35.0% |
| ! | TGGATATGAGTTTTGCAAGA+AGG | + | chr3.3:76542840-76542859 | None:intergenic | 35.0% |
| ! | TGGCATCCATTTTCCTATAA+AGG | + | chr3.3:76545916-76545935 | None:intergenic | 35.0% |
| !! | ATAGTTTAGGCTTTGGGATA+TGG | - | chr3.3:76547245-76547264 | MS.gene06683:CDS | 35.0% |
| !! | CATTTTGGAGGAATGATTTC+AGG | - | chr3.3:76545694-76545713 | MS.gene06683:CDS | 35.0% |
| !! | GTTTTAATGCATTCCTTCAG+GGG | - | chr3.3:76547115-76547134 | MS.gene06683:CDS | 35.0% |
| !! | TTTGTGGGTTTCTGGAATTA+AGG | - | chr3.3:76545283-76545302 | MS.gene06683:intron | 35.0% |
| AAACTAGGCTTAGGTGGTTT+GGG | - | chr3.3:76543662-76543681 | MS.gene06683:intron | 40.0% | |
| AACAAAGGCAAGACTAGAGA+AGG | + | chr3.3:76544881-76544900 | None:intergenic | 40.0% | |
| AAGTGCCAATAGTGAATCTG+TGG | + | chr3.3:76546538-76546557 | None:intergenic | 40.0% | |
| ACAAAGGCAAGACTAGAGAA+GGG | + | chr3.3:76544880-76544899 | None:intergenic | 40.0% | |
| ACCTTCTCCTCTCAAAATGA+CGG | - | chr3.3:76543233-76543252 | MS.gene06683:CDS | 40.0% | |
| ACGTTAATTTACAGCAGAGC+TGG | + | chr3.3:76543542-76543561 | None:intergenic | 40.0% | |
| AGGAAAATGGATGCCATTCA+CGG | - | chr3.3:76545920-76545939 | MS.gene06683:intron | 40.0% | |
| AGTGAGAGTAGATCAAATGG+AGG | - | chr3.3:76543717-76543736 | MS.gene06683:intron | 40.0% | |
| ATAACCATACTTGACCAGGT+AGG | + | chr3.3:76544080-76544099 | None:intergenic | 40.0% | |
| CACCTATAGTAGAAAGATGG+TGG | - | chr3.3:76543639-76543658 | MS.gene06683:intron | 40.0% | |
| CCAAGATATCATCACTTTGG+AGG | - | chr3.3:76545516-76545535 | MS.gene06683:intron | 40.0% | |
| CCTCCAAAGTGATGATATCT+TGG | + | chr3.3:76545519-76545538 | None:intergenic | 40.0% | |
| CGTGAAGCTTCTTCATCAAA+AGG | - | chr3.3:76545836-76545855 | MS.gene06683:intron | 40.0% | |
| CTGAACAAAAGCTGCTAATG+AGG | + | chr3.3:76546130-76546149 | None:intergenic | 40.0% | |
| CTGCATATATCACCTGTAGA+TGG | - | chr3.3:76544661-76544680 | MS.gene06683:intron | 40.0% | |
| CTTCACCAAGTATTCAGCTA+TGG | + | chr3.3:76547395-76547414 | None:intergenic | 40.0% | |
| CTTGCCTACAGAAAGTTGAA+GGG | + | chr3.3:76544163-76544182 | None:intergenic | 40.0% | |
| GAAATATGTGCAGACAGTGA+AGG | - | chr3.3:76546984-76547003 | MS.gene06683:intron | 40.0% | |
| GAATGCTGATGTAAATGCCA+AGG | - | chr3.3:76547073-76547092 | MS.gene06683:CDS | 40.0% | |
| GAGGATAGTCAGATCACTAA+AGG | - | chr3.3:76543736-76543755 | MS.gene06683:intron | 40.0% | |
| GATGTTCAGCTTCAGCTTTA+TGG | - | chr3.3:76543168-76543187 | MS.gene06683:intron | 40.0% | |
| GATTTCAGGAACTGATCACA+AGG | - | chr3.3:76545708-76545727 | MS.gene06683:CDS | 40.0% | |
| GCAAGGACAATATTGCTTTG+TGG | - | chr3.3:76545267-76545286 | MS.gene06683:intron | 40.0% | |
| GGTAAGAGAAGATTAAACCG+AGG | + | chr3.3:76542819-76542838 | None:intergenic | 40.0% | |
| GTCAAAGAAACAACACGAGT+TGG | + | chr3.3:76544499-76544518 | None:intergenic | 40.0% | |
| GTTGTTGAATGAAACGACGA+TGG | + | chr3.3:76542860-76542879 | None:intergenic | 40.0% | |
| TAACTACTGGAGAGACATCA+GGG | + | chr3.3:76544755-76544774 | None:intergenic | 40.0% | |
| TACTGAAGGTCCTTGTAGTA+CGG | - | chr3.3:76543206-76543225 | MS.gene06683:CDS | 40.0% | |
| TCTCAAAAAGCCTCAGCAAT+TGG | - | chr3.3:76546281-76546300 | MS.gene06683:intron | 40.0% | |
| TCTCCAGTAGTTAGATTGGT+GGG | - | chr3.3:76544762-76544781 | MS.gene06683:intron | 40.0% | |
| TCTTCCTCATGCTGCATAAA+CGG | + | chr3.3:76547487-76547506 | None:intergenic | 40.0% | |
| TGATAGACCTCCTAAGAATC+GGG | + | chr3.3:76544815-76544834 | None:intergenic | 40.0% | |
| TGCCATCATTGTCTTCTGAA+TGG | + | chr3.3:76547432-76547451 | None:intergenic | 40.0% | |
| TGTATCATCGTGTGAAACGA+CGG | + | chr3.3:76542920-76542939 | None:intergenic | 40.0% | |
| TGTCGGAACTATATCCTACT+TGG | - | chr3.3:76544243-76544262 | MS.gene06683:intron | 40.0% | |
| TGTCTCTCCAGTAGTTAGAT+TGG | - | chr3.3:76544758-76544777 | MS.gene06683:intron | 40.0% | |
| TTATAACGGTCCCGATTCTT+AGG | - | chr3.3:76544802-76544821 | MS.gene06683:intron | 40.0% | |
| ! | CTATATCCTACTTGGCTTGA+TGG | - | chr3.3:76544251-76544270 | MS.gene06683:intron | 40.0% |
| ! | TAGCTTTTGCGCCAAAATCA+CGG | - | chr3.3:76543924-76543943 | MS.gene06683:intron | 40.0% |
| ! | TTTTCCTACCTGGTCAAGTA+TGG | - | chr3.3:76544073-76544092 | MS.gene06683:intron | 40.0% |
| !! | ATCAGAAACGAAAGCGTTGA+CGG | - | chr3.3:76543018-76543037 | MS.gene06683:intron | 40.0% |
| !! | ATTCACGGATTTGCTAGAGA+GGG | - | chr3.3:76545935-76545954 | MS.gene06683:intron | 40.0% |
| !! | CAGCTCTTTTGTTTACGAAG+AGG | - | chr3.3:76544586-76544605 | MS.gene06683:intron | 40.0% |
| !! | CATTTTTAGGCCAATTGCTG+AGG | + | chr3.3:76546294-76546313 | None:intergenic | 40.0% |
| !! | GGAGAGTACTGAATTAGATG+AGG | - | chr3.3:76543077-76543096 | MS.gene06683:intron | 40.0% |
| !! | GTAGAAAGATGGTGGAAACT+AGG | - | chr3.3:76543647-76543666 | MS.gene06683:intron | 40.0% |
| !! | GTGACATCTGTAGTTCTAAG+TGG | - | chr3.3:76547461-76547480 | MS.gene06683:CDS | 40.0% |
| !!! | ATGCAGTCATTTTTCCTACC+TGG | - | chr3.3:76544063-76544082 | MS.gene06683:intron | 40.0% |
| AAATGACGGCTCGTGCTAAA+TGG | - | chr3.3:76543247-76543266 | MS.gene06683:CDS | 45.0% | |
| AACAACTTGCAGCACAGTGA+AGG | + | chr3.3:76546059-76546078 | None:intergenic | 45.0% | |
| ACGGCTTATTAGCTCACCAA+AGG | + | chr3.3:76544281-76544300 | None:intergenic | 45.0% | |
| AGATGCAAGAGAGATGCAAG+TGG | + | chr3.3:76546494-76546513 | None:intergenic | 45.0% | |
| AGTATGGTTATCTCGCTGTG+CGG | - | chr3.3:76544089-76544108 | MS.gene06683:intron | 45.0% | |
| AGTCAGATCACTAAAGGGAG+AGG | - | chr3.3:76543742-76543761 | MS.gene06683:intron | 45.0% | |
| ATGCCTTATCCCACCAAATG+AGG | + | chr3.3:76543882-76543901 | None:intergenic | 45.0% | |
| ATGTAGCCAACCTCATTTGG+TGG | - | chr3.3:76543869-76543888 | MS.gene06683:intron | 45.0% | |
| ATTGGTGGGATGTCTTCAAG+TGG | - | chr3.3:76544776-76544795 | MS.gene06683:intron | 45.0% | |
| CAAAGGCAAGACTAGAGAAG+GGG | + | chr3.3:76544879-76544898 | None:intergenic | 45.0% | |
| CAGCTCCCCTATCTAATGAT+AGG | - | chr3.3:76544922-76544941 | MS.gene06683:intron | 45.0% | |
| CATAACCAATTAGTGGCGCA+TGG | + | chr3.3:76544687-76544706 | None:intergenic | 45.0% | |
| CATCCCACCAATCTAACTAC+TGG | + | chr3.3:76544768-76544787 | None:intergenic | 45.0% | |
| CGAGATAACCATACTTGACC+AGG | + | chr3.3:76544084-76544103 | None:intergenic | 45.0% | |
| CTAACTACTGGAGAGACATC+AGG | + | chr3.3:76544756-76544775 | None:intergenic | 45.0% | |
| CTCTCCAGTAGTTAGATTGG+TGG | - | chr3.3:76544761-76544780 | MS.gene06683:intron | 45.0% | |
| CTCTCTAGCAAATCCGTGAA+TGG | + | chr3.3:76545936-76545955 | None:intergenic | 45.0% | |
| CTTATCCCACCAAATGAGGT+TGG | + | chr3.3:76543878-76543897 | None:intergenic | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr3.3:76543661-76543680 | MS.gene06683:intron | 45.0% | |
| GATAAGGCATGGTTGTGTAG+TGG | - | chr3.3:76543892-76543911 | MS.gene06683:intron | 45.0% | |
| GATGCAAGAGAGATGCAAGT+GGG | + | chr3.3:76546493-76546512 | None:intergenic | 45.0% | |
| GCTTGCCTACAGAAAGTTGA+AGG | + | chr3.3:76544164-76544183 | None:intergenic | 45.0% | |
| GGAAAAAACACACGTGGCAT+CGG | + | chr3.3:76545660-76545679 | None:intergenic | 45.0% | |
| GGGATTTCCATCTGCACTAT+TGG | - | chr3.3:76547135-76547154 | MS.gene06683:CDS | 45.0% | |
| TACTTCTGCATTGCATCCTC+AGG | + | chr3.3:76544212-76544231 | None:intergenic | 45.0% | |
| TCCATGTAGCCAACCTCATT+TGG | - | chr3.3:76543866-76543885 | MS.gene06683:intron | 45.0% | |
| TCGCTGTGCGGTAAAAAGAA+AGG | - | chr3.3:76544101-76544120 | MS.gene06683:intron | 45.0% | |
| TGGGCTTGTAGAGAGAAGAA+CGG | - | chr3.3:76543681-76543700 | MS.gene06683:intron | 45.0% | |
| TGTAGCCAACCTCATTTGGT+GGG | - | chr3.3:76543870-76543889 | MS.gene06683:intron | 45.0% | |
| ! | ACCAAATGAGGTTGGCTACA+TGG | + | chr3.3:76543870-76543889 | None:intergenic | 45.0% |
| ! | AGCTTTTGCGCCAAAATCAC+GGG | - | chr3.3:76543925-76543944 | MS.gene06683:intron | 45.0% |
| ! | CAACCTCATTTGGTGGGATA+AGG | - | chr3.3:76543876-76543895 | MS.gene06683:intron | 45.0% |
| ! | GTGAGATTGATTCTCTACGG+AGG | - | chr3.3:76544846-76544865 | MS.gene06683:intron | 45.0% |
| ! | GTTTGGATGAGCGGTTAGTT+TGG | - | chr3.3:76543560-76543579 | MS.gene06683:intron | 45.0% |
| ! | TCATTTGGTGGGATAAGGCA+TGG | - | chr3.3:76543881-76543900 | MS.gene06683:intron | 45.0% |
| ! | TGATGATGATTGGGAAGGTG+TGG | - | chr3.3:76543056-76543075 | MS.gene06683:intron | 45.0% |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr3.3:76543653-76543672 | MS.gene06683:intron | 45.0% |
| !! | CATTCACGGATTTGCTAGAG+AGG | - | chr3.3:76545934-76545953 | MS.gene06683:intron | 45.0% |
| !!! | CTGCTTTTTGCAAAGCAGCT+TGG | - | chr3.3:76545045-76545064 | MS.gene06683:intron | 45.0% |
| !! | TAAAAATAATAAATTATTCT+AGG | + | chr3.3:76544972-76544991 | None:intergenic | 5.0% |
| AATGTCACAGAGCTGCTGGT+TGG | - | chr3.3:76547047-76547066 | MS.gene06683:CDS | 50.0% | |
| AGGCAAGCGTGGCAGAAATT+GGG | - | chr3.3:76544176-76544195 | MS.gene06683:intron | 50.0% | |
| CAACTTTCTGTAGGCAAGCG+TGG | - | chr3.3:76544165-76544184 | MS.gene06683:intron | 50.0% | |
| CACGTAACAGCGTAATGCAG+TGG | + | chr3.3:76547361-76547380 | None:intergenic | 50.0% | |
| CAGAGAAGTAAAACCGGCGA+CGG | - | chr3.3:76544518-76544537 | MS.gene06683:intron | 50.0% | |
| CCAGCAGCTCTGTGACATTA+AGG | + | chr3.3:76547046-76547065 | None:intergenic | 50.0% | |
| CCTTAATGTCACAGAGCTGC+TGG | - | chr3.3:76547043-76547062 | MS.gene06683:CDS | 50.0% | |
| GAAGGTTGAGCCGTACTACA+AGG | + | chr3.3:76543219-76543238 | None:intergenic | 50.0% | |
| GACGACGTCGTTTATGATCC+CGG | - | chr3.3:76542946-76542965 | MS.gene06683:intron | 50.0% | |
| GAGCTGAATACTGGTCCCAT+TGG | + | chr3.3:76544572-76544591 | None:intergenic | 50.0% | |
| TAACGGTCCCGATTCTTAGG+AGG | - | chr3.3:76544805-76544824 | MS.gene06683:intron | 50.0% | |
| TAGGCAAGCGTGGCAGAAAT+TGG | - | chr3.3:76544175-76544194 | MS.gene06683:intron | 50.0% | |
| TATGTGCAGACAGTGAAGGC+CGG | - | chr3.3:76546988-76547007 | MS.gene06683:intron | 50.0% | |
| TGCAGATGGAAATCCCCTGA+AGG | + | chr3.3:76547131-76547150 | None:intergenic | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+TGG | - | chr3.3:76543656-76543675 | MS.gene06683:intron | 50.0% | |
| TTCTGCATTGCATCCTCAGG+AGG | + | chr3.3:76544209-76544228 | None:intergenic | 50.0% | |
| ! | AGCCATAACCGACTCAGCTT+CGG | + | chr3.3:76542986-76543005 | None:intergenic | 50.0% |
| ! | AGGATGACAAAAGCGCGACA+AGG | + | chr3.3:76545593-76545612 | None:intergenic | 50.0% |
| ! | ATGGTGAGTCCCCGTGATTT+TGG | + | chr3.3:76543938-76543957 | None:intergenic | 50.0% |
| ! | GCTTTTGCGCCAAAATCACG+GGG | - | chr3.3:76543926-76543945 | MS.gene06683:intron | 50.0% |
| !! | AAACGAAAGCGTTGACGGTG+GGG | - | chr3.3:76543023-76543042 | MS.gene06683:intron | 50.0% |
| !! | AGAAACGAAAGCGTTGACGG+TGG | - | chr3.3:76543021-76543040 | MS.gene06683:intron | 50.0% |
| !! | ATTTTGCTGTCTCGTGCCAG+AGG | - | chr3.3:76546891-76546910 | MS.gene06683:intron | 50.0% |
| !! | GAAACGAAAGCGTTGACGGT+GGG | - | chr3.3:76543022-76543041 | MS.gene06683:intron | 50.0% |
| !! | GCCGTCATTTTGAGAGGAGA+AGG | + | chr3.3:76543237-76543256 | None:intergenic | 50.0% |
| !! | TTGGCTTGATGGTGCACCTT+TGG | - | chr3.3:76544262-76544281 | MS.gene06683:intron | 50.0% |
| ACGGGGACTCACCATGATTC+TGG | - | chr3.3:76543943-76543962 | MS.gene06683:intron | 55.0% | |
| AGAAGTAAAACCGGCGACGG+TGG | - | chr3.3:76544521-76544540 | MS.gene06683:intron | 55.0% | |
| AGCCGAAGCTGAGTCGGTTA+TGG | - | chr3.3:76542981-76543000 | MS.gene06683:intron | 55.0% | |
| ATCGTGTGAAACGACGGCGT+TGG | + | chr3.3:76542914-76542933 | None:intergenic | 55.0% | |
| GAGTCGGTTATGGCTGAGCA+AGG | - | chr3.3:76542991-76543010 | MS.gene06683:intron | 55.0% | |
| GATGGCCATGCGCCACTAAT+TGG | - | chr3.3:76544679-76544698 | MS.gene06683:intron | 55.0% | |
| GCAAGACTAGAGAAGGGGAG+AGG | + | chr3.3:76544874-76544893 | None:intergenic | 55.0% | |
| GGTGCACCATCAAGCCAAGT+AGG | + | chr3.3:76544260-76544279 | None:intergenic | 55.0% | |
| GTGGCCGTTTATGCAGCATG+AGG | - | chr3.3:76547480-76547499 | MS.gene06683:CDS | 55.0% | |
| TCGACACCTTCTGCGAAAGC+CGG | + | chr3.3:76543146-76543165 | None:intergenic | 55.0% | |
| ! | AACCGACTCAGCTTCGGCTT+CGG | + | chr3.3:76542980-76542999 | None:intergenic | 55.0% |
| ! | ATTGGGTGCTATGCCTCCTG+AGG | - | chr3.3:76544193-76544212 | MS.gene06683:intron | 55.0% |
| !! | GCACGAGCCGTCATTTTGAG+AGG | + | chr3.3:76543243-76543262 | None:intergenic | 55.0% |
| ACTCAGCTTCGGCTTCGGGA+CGG | + | chr3.3:76542975-76542994 | None:intergenic | 60.0% | |
| AGTAAAACCGGCGACGGTGG+TGG | - | chr3.3:76544524-76544543 | MS.gene06683:intron | 60.0% | |
| AGTGGCGCATGGCCATCTAC+AGG | + | chr3.3:76544676-76544695 | None:intergenic | 60.0% | |
| CGATCCACAGCCCAGTGTAG+CGG | + | chr3.3:76547017-76547036 | None:intergenic | 60.0% | |
| CTACACTGGGCTGTGGATCG+TGG | - | chr3.3:76547017-76547036 | MS.gene06683:intron | 60.0% | |
| GTCCCCGAGCCTCTGAACTT+GGG | + | chr3.3:76544550-76544569 | None:intergenic | 60.0% | |
| GTGGCCCAAGTTCAGAGGCT+CGG | - | chr3.3:76544543-76544562 | MS.gene06683:intron | 60.0% | |
| TCAGAGGCTCGGGGACCAAT+GGG | - | chr3.3:76544554-76544573 | MS.gene06683:intron | 60.0% | |
| TCCCGAAGCCGAAGCTGAGT+CGG | - | chr3.3:76542975-76542994 | MS.gene06683:intron | 60.0% | |
| TGGCCCAAGTTCAGAGGCTC+GGG | - | chr3.3:76544544-76544563 | MS.gene06683:intron | 60.0% | |
| TTCAGAGGCTCGGGGACCAA+TGG | - | chr3.3:76544553-76544572 | MS.gene06683:intron | 60.0% | |
| ! | ACCGACTCAGCTTCGGCTTC+GGG | + | chr3.3:76542979-76542998 | None:intergenic | 60.0% |
| ! | TCACAGAGCTGCTGGTTGGC+AGG | - | chr3.3:76547051-76547070 | MS.gene06683:CDS | 60.0% |
| ! | TTTTGTTGCTGCTGCCGCCG+CGG | - | chr3.3:76543119-76543138 | MS.gene06683:intron | 60.0% |
| AAGGCCGGACACCGCTACAC+TGG | - | chr3.3:76547003-76547022 | MS.gene06683:intron | 65.0% | |
| AGGCCGGACACCGCTACACT+GGG | - | chr3.3:76547004-76547023 | MS.gene06683:intron | 65.0% | |
| CAGCCCAGTGTAGCGGTGTC+CGG | + | chr3.3:76547010-76547029 | None:intergenic | 65.0% | |
| CTTCTGCGAAAGCCGGTCCG+CGG | + | chr3.3:76543139-76543158 | None:intergenic | 65.0% | |
| GACACCGCTACACTGGGCTG+TGG | - | chr3.3:76547010-76547029 | MS.gene06683:intron | 65.0% | |
| GGCCCAAGTTCAGAGGCTCG+GGG | - | chr3.3:76544545-76544564 | MS.gene06683:intron | 65.0% | |
| GGTCCCCGAGCCTCTGAACT+TGG | + | chr3.3:76544551-76544570 | None:intergenic | 65.0% | |
| TTCGGCTTCGGGACGGTGTC+CGG | + | chr3.3:76542968-76542987 | None:intergenic | 65.0% | |
| ! | CGGTGGTGGCCCAAGTTCAG+AGG | - | chr3.3:76544538-76544557 | MS.gene06683:intron | 65.0% |
| ACTTGGGCCACCACCGTCGC+CGG | + | chr3.3:76544534-76544553 | None:intergenic | 70.0% | |
| TCGGCTTCGGGACGGTGTCC+GGG | + | chr3.3:76542967-76542986 | None:intergenic | 70.0% | |
| ! | CGCGGACCGGCTTTCGCAGA+AGG | - | chr3.3:76543137-76543156 | MS.gene06683:intron | 70.0% |
| CTGCGAAAGCCGGTCCGCGG+CGG | + | chr3.3:76543136-76543155 | None:intergenic | 75.0% | |
| TTGCTGCTGCCGCCGCGGAC+CGG | - | chr3.3:76543124-76543143 | MS.gene06683:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76542772 | 76547516 | 76542772 | ID=MS.gene06683 |
| chr3.3 | mRNA | 76542772 | 76547516 | 76542772 | ID=MS.gene06683.t1;Parent=MS.gene06683 |
| chr3.3 | exon | 76547020 | 76547516 | 76547020 | ID=MS.gene06683.t1.exon1;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76547020 | 76547516 | 76547020 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| chr3.3 | exon | 76546005 | 76546110 | 76546005 | ID=MS.gene06683.t1.exon2;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76546005 | 76546110 | 76546005 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| chr3.3 | exon | 76545664 | 76545767 | 76545664 | ID=MS.gene06683.t1.exon3;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76545664 | 76545767 | 76545664 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| chr3.3 | exon | 76544275 | 76544366 | 76544275 | ID=MS.gene06683.t1.exon4;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76544275 | 76544366 | 76544275 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| chr3.3 | exon | 76543194 | 76543291 | 76543194 | ID=MS.gene06683.t1.exon5;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76543194 | 76543291 | 76543194 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| chr3.3 | exon | 76542772 | 76542948 | 76542772 | ID=MS.gene06683.t1.exon6;Parent=MS.gene06683.t1 |
| chr3.3 | CDS | 76542772 | 76542948 | 76542772 | ID=cds.MS.gene06683.t1;Parent=MS.gene06683.t1 |
| Gene Sequence |
| Protein sequence |
