Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06894.t1 | XP_013461433.1 | 99.4 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 3.30E-167 | 597.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06894.t1 | Q9STP8 | 64.0 | 283 | 101 | 1 | 6 | 288 | 3 | 284 | 7.5e-96 | 352.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06894.t1 | A0A072V293 | 99.4 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 2.4e-167 | 597.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057128 | MS.gene06894 | 0.939044 | 2.46E-99 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06894 | MS.gene059375 | PPI |
| MS.gene06894 | MS.gene049002 | PPI |
| MS.gene06894 | MS.gene67470 | PPI |
| MS.gene06894 | MS.gene066614 | PPI |
| MS.gene06894 | MS.gene67707 | PPI |
| MS.gene06894 | MS.gene37513 | PPI |
| MS.gene06894 | MS.gene059523 | PPI |
| MS.gene067034 | MS.gene06894 | PPI |
| MS.gene06894 | MS.gene20177 | PPI |
| MS.gene06894 | MS.gene99073 | PPI |
| MS.gene06894 | MS.gene75574 | PPI |
| MS.gene06894 | MS.gene67472 | PPI |
| MS.gene50288 | MS.gene06894 | PPI |
| MS.gene06894 | MS.gene045231 | PPI |
| MS.gene06194 | MS.gene06894 | PPI |
| MS.gene06894 | MS.gene55865 | PPI |
| MS.gene06894 | MS.gene99124 | PPI |
| MS.gene06894 | MS.gene006945 | PPI |
| MS.gene06894 | MS.gene006947 | PPI |
| MS.gene06894 | MS.gene006943 | PPI |
| MS.gene06894 | MS.gene79129 | PPI |
| MS.gene06894 | MS.gene50290 | PPI |
| MS.gene59495 | MS.gene06894 | PPI |
| MS.gene06894 | MS.gene64797 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06894.t1 | MTR_3g491870 | 99.160 | 357 | 3 | 0 | 1 | 357 | 1 | 357 | 0.0 | 737 |
| MS.gene06894.t1 | MTR_1g418545 | 38.462 | 130 | 66 | 3 | 101 | 219 | 165 | 291 | 1.72e-24 | 102 |
| MS.gene06894.t1 | MTR_5g043640 | 42.268 | 97 | 56 | 0 | 240 | 336 | 126 | 222 | 1.55e-16 | 78.6 |
| MS.gene06894.t1 | MTR_5g043640 | 33.945 | 109 | 69 | 1 | 241 | 346 | 94 | 202 | 2.63e-14 | 72.4 |
| MS.gene06894.t1 | MTR_5g043640 | 43.023 | 86 | 49 | 0 | 253 | 338 | 73 | 158 | 2.52e-13 | 69.3 |
| MS.gene06894.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 113 | 218 | 8.99e-16 | 76.3 |
| MS.gene06894.t1 | MTR_2g048680 | 39.091 | 110 | 61 | 3 | 246 | 353 | 193 | 298 | 3.46e-15 | 75.9 |
| MS.gene06894.t1 | MTR_6g027840 | 32.394 | 142 | 88 | 2 | 210 | 345 | 333 | 472 | 3.06e-14 | 74.3 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 2.90e-12 | 66.6 |
| MS.gene06894.t1 | MTR_3g088410 | 33.696 | 92 | 61 | 0 | 238 | 329 | 21 | 112 | 3.07e-12 | 64.3 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 4.39e-12 | 67.0 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.21e-12 | 66.6 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 5.42e-12 | 66.6 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 8.93e-12 | 66.2 |
| MS.gene06894.t1 | MTR_2g017825 | 43.373 | 83 | 47 | 0 | 245 | 327 | 46 | 128 | 9.10e-12 | 66.2 |
| MS.gene06894.t1 | MTR_5g023090 | 28.221 | 163 | 102 | 3 | 194 | 343 | 272 | 432 | 1.08e-11 | 66.2 |
| MS.gene06894.t1 | MTR_5g022050 | 33.000 | 100 | 65 | 1 | 244 | 343 | 301 | 398 | 3.40e-11 | 64.7 |
| MS.gene06894.t1 | MTR_5g077770 | 39.326 | 89 | 54 | 0 | 245 | 333 | 563 | 651 | 5.52e-11 | 64.3 |
| MS.gene06894.t1 | MTR_7g113200 | 32.653 | 98 | 62 | 1 | 106 | 199 | 13 | 110 | 5.88e-11 | 63.9 |
| MS.gene06894.t1 | MTR_5g026740 | 44.444 | 72 | 40 | 0 | 120 | 191 | 11 | 82 | 7.25e-11 | 58.5 |
| MS.gene06894.t1 | MTR_7g113200 | 33.684 | 95 | 59 | 1 | 109 | 199 | 16 | 110 | 8.38e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06894.t1 | AT4G27780 | 64.205 | 352 | 113 | 4 | 6 | 351 | 3 | 347 | 1.74e-154 | 438 |
| MS.gene06894.t1 | AT5G53470 | 61.714 | 350 | 118 | 4 | 6 | 355 | 3 | 336 | 4.71e-143 | 409 |
| MS.gene06894.t1 | AT4G27780 | 63.670 | 267 | 84 | 4 | 6 | 266 | 3 | 262 | 2.39e-105 | 310 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.56e-25 | 105 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 2.66e-25 | 105 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene06894.t1 | AT4G24230 | 40.157 | 127 | 66 | 2 | 94 | 220 | 218 | 334 | 3.90e-25 | 104 |
| MS.gene06894.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 9.39e-15 | 75.9 |
| MS.gene06894.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.39e-14 | 75.5 |
| MS.gene06894.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.42e-14 | 75.5 |
| MS.gene06894.t1 | AT5G27630 | 40.659 | 91 | 50 | 1 | 109 | 195 | 15 | 105 | 1.43e-14 | 75.5 |
| MS.gene06894.t1 | AT2G03430 | 36.082 | 97 | 62 | 0 | 240 | 336 | 119 | 215 | 6.91e-14 | 70.9 |
| MS.gene06894.t1 | AT2G03430 | 44.444 | 81 | 45 | 0 | 258 | 338 | 71 | 151 | 2.10e-13 | 69.7 |
| MS.gene06894.t1 | AT2G03430 | 30.328 | 122 | 79 | 2 | 241 | 356 | 87 | 208 | 5.03e-12 | 65.5 |
| MS.gene06894.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 1.94e-13 | 72.0 |
| MS.gene06894.t1 | AT3G05420 | 37.895 | 95 | 55 | 1 | 109 | 199 | 14 | 108 | 1.94e-13 | 72.0 |
| MS.gene06894.t1 | AT5G37500 | 41.111 | 90 | 53 | 0 | 245 | 334 | 539 | 628 | 5.81e-12 | 67.4 |
| MS.gene06894.t1 | AT5G40160 | 36.893 | 103 | 61 | 2 | 240 | 342 | 192 | 290 | 1.47e-11 | 65.1 |
| MS.gene06894.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 184 | 286 | 1.54e-11 | 65.1 |
| MS.gene06894.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene06894.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene06894.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 222 | 324 | 2.04e-11 | 64.7 |
| MS.gene06894.t1 | AT4G35450 | 33.981 | 103 | 68 | 0 | 241 | 343 | 230 | 332 | 2.40e-11 | 64.7 |
| MS.gene06894.t1 | AT5G66055 | 41.558 | 77 | 45 | 0 | 267 | 343 | 323 | 399 | 2.68e-11 | 65.1 |
| MS.gene06894.t1 | AT2G17390 | 32.039 | 103 | 70 | 0 | 241 | 343 | 224 | 326 | 5.44e-11 | 63.5 |
Find 92 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTCCTTTATAGGAAAA+TGG | 0.210754 | 3.2:-77244088 | MS.gene06894:intron |
| TAGGCAAGCGTGGCAGAAAT+TGG | 0.241228 | 3.2:-77245820 | MS.gene06894:CDS |
| TTCGGCTTCGGGACGGTGTC+CGG | 0.281477 | 3.2:+77247003 | None:intergenic |
| GATGTTCAGCTTCAGCTTTA+TGG | 0.297104 | 3.2:-77246800 | MS.gene06894:CDS |
| ATGTTCAGCTTCAGCTTTAT+GGG | 0.299378 | 3.2:-77246799 | MS.gene06894:CDS |
| AAATGACGGCTCGTGCTAAA+TGG | 0.312096 | 3.2:-77246721 | MS.gene06894:intron |
| CCAGCAGCTCTGTGACATTA+AGG | 0.334693 | 3.2:+77242952 | None:intergenic |
| ACCGACTCAGCTTCGGCTTC+GGG | 0.342493 | 3.2:+77246992 | None:intergenic |
| GGTCCCCGAGCCTCTGAACT+TGG | 0.355498 | 3.2:+77245447 | None:intergenic |
| TTGGCTTGATGGTGCACCTT+TGG | 0.364530 | 3.2:-77245733 | MS.gene06894:intron |
| CTATATCCTACTTGGCTTGA+TGG | 0.365767 | 3.2:-77245744 | MS.gene06894:CDS |
| AACCGACTCAGCTTCGGCTT+CGG | 0.381980 | 3.2:+77246991 | None:intergenic |
| TTGCTGCTGCCGCCGCGGAC+CGG | 0.402492 | 3.2:-77246844 | MS.gene06894:CDS |
| ATGATGATTATGATGATGAT+TGG | 0.403312 | 3.2:-77246922 | MS.gene06894:CDS |
| TGGCCCAAGTTCAGAGGCTC+GGG | 0.411198 | 3.2:-77245451 | MS.gene06894:CDS |
| AGCCGAAGCTGAGTCGGTTA+TGG | 0.416065 | 3.2:-77246987 | MS.gene06894:CDS |
| TCTTCCTCATGCTGCATAAA+CGG | 0.428588 | 3.2:+77242511 | None:intergenic |
| TAAACAAAAGAGCTGAATAC+TGG | 0.450530 | 3.2:+77245417 | None:intergenic |
| AGGAAAATGGATGCCATTCA+CGG | 0.450994 | 3.2:-77244075 | MS.gene06894:CDS |
| ATCAGAAACGAAAGCGTTGA+CGG | 0.451724 | 3.2:-77246950 | MS.gene06894:CDS |
| CAGCCCAGTGTAGCGGTGTC+CGG | 0.452667 | 3.2:+77242988 | None:intergenic |
| TCGGCTTCGGGACGGTGTCC+GGG | 0.456211 | 3.2:+77247004 | None:intergenic |
| AAATGGGTGAATGGCATGAT+TGG | 0.457260 | 3.2:-77247198 | MS.gene06894:CDS |
| CTACTAAAGTGTATCGAAAG+TGG | 0.458537 | 3.2:-77244024 | MS.gene06894:CDS |
| CGCGGACCGGCTTTCGCAGA+AGG | 0.462676 | 3.2:-77246831 | MS.gene06894:CDS |
| TGCCATCATTGTCTTCTGAA+TGG | 0.466803 | 3.2:+77242566 | None:intergenic |
| TCACAGAGCTGCTGGTTGGC+AGG | 0.467967 | 3.2:-77242944 | MS.gene06894:CDS |
| CTCTCTAGCAAATCCGTGAA+TGG | 0.469964 | 3.2:+77244062 | None:intergenic |
| TTCAGAGGCTCGGGGACCAA+TGG | 0.472100 | 3.2:-77245442 | MS.gene06894:CDS |
| AAGGCCGGACACCGCTACAC+TGG | 0.472472 | 3.2:-77242992 | MS.gene06894:CDS |
| TGATGATTATGATGATGATT+GGG | 0.475622 | 3.2:-77246921 | MS.gene06894:CDS |
| TACTTCTGCATTGCATCCTC+AGG | 0.475742 | 3.2:+77245786 | None:intergenic |
| GTGGCCCAAGTTCAGAGGCT+CGG | 0.480788 | 3.2:-77245452 | MS.gene06894:CDS |
| CCTTAATGTCACAGAGCTGC+TGG | 0.483735 | 3.2:-77242952 | MS.gene06894:CDS |
| TGTCGGAACTATATCCTACT+TGG | 0.487009 | 3.2:-77245752 | MS.gene06894:CDS |
| TGGAGTTTCAGTGAATTTGA+AGG | 0.487800 | 3.2:-77244004 | MS.gene06894:CDS |
| GAAACGAAAGCGTTGACGGT+GGG | 0.490532 | 3.2:-77246946 | MS.gene06894:CDS |
| GACGACGTCGTTTCTGATCC+CGG | 0.498134 | 3.2:-77247022 | MS.gene06894:CDS |
| CTTTGACAGAGAAGTAAAAC+CGG | 0.501146 | 3.2:-77245483 | MS.gene06894:intron |
| TCAGAGGCTCGGGGACCAAT+GGG | 0.511058 | 3.2:-77245441 | MS.gene06894:CDS |
| AGGCAAGCGTGGCAGAAATT+GGG | 0.512730 | 3.2:-77245819 | MS.gene06894:CDS |
| TACTGAAGGTCCTTGTAGTA+CGG | 0.514723 | 3.2:-77246762 | MS.gene06894:CDS |
| GTCCCCGAGCCTCTGAACTT+GGG | 0.519979 | 3.2:+77245448 | None:intergenic |
| AGCCATAACCGACTCAGCTT+CGG | 0.524028 | 3.2:+77246985 | None:intergenic |
| CTTCACCAAGTATTCAGCTA+TGG | 0.524917 | 3.2:+77242603 | None:intergenic |
| AGAATCCATAGCTGAATACT+TGG | 0.526526 | 3.2:-77242608 | MS.gene06894:CDS |
| AGTAAAACCGGCGACGGTGG+TGG | 0.531277 | 3.2:-77245471 | MS.gene06894:CDS |
| ACTTGGGCCACCACCGTCGC+CGG | 0.539075 | 3.2:+77245464 | None:intergenic |
| GAGCTGAATACTGGTCCCAT+TGG | 0.543058 | 3.2:+77245426 | None:intergenic |
| CAACTTTCTGTAGGCAAGCG+TGG | 0.544482 | 3.2:-77245830 | MS.gene06894:intron |
| GACACCGCTACACTGGGCTG+TGG | 0.545393 | 3.2:-77242985 | MS.gene06894:CDS |
| CTGCGAAAGCCGGTCCGCGG+CGG | 0.545771 | 3.2:+77246835 | None:intergenic |
| TGATGATGATTGGGAAGGTG+TGG | 0.546547 | 3.2:-77246912 | MS.gene06894:CDS |
| GGAGTTTCAGTGAATTTGAA+GGG | 0.548533 | 3.2:-77244003 | MS.gene06894:intron |
| GAAGGTTGAGCCGTACTACA+AGG | 0.554732 | 3.2:+77246752 | None:intergenic |
| CTACACTGGGCTGTGGATCG+TGG | 0.555327 | 3.2:-77242978 | MS.gene06894:CDS |
| AGGCCGGACACCGCTACACT+GGG | 0.560736 | 3.2:-77242991 | MS.gene06894:CDS |
| TCGACACCTTCTGCGAAAGC+CGG | 0.563972 | 3.2:+77246825 | None:intergenic |
| CGGTGGTGGCCCAAGTTCAG+AGG | 0.566168 | 3.2:-77245457 | MS.gene06894:CDS |
| AAACGAAAGCGTTGACGGTG+GGG | 0.575349 | 3.2:-77246945 | MS.gene06894:CDS |
| GGTGCACCATCAAGCCAAGT+AGG | 0.576322 | 3.2:+77245738 | None:intergenic |
| ATCGTGTGAAACGACGGCGT+TGG | 0.582169 | 3.2:+77247057 | None:intergenic |
| TGTATCATCGTGTGAAACGA+CGG | 0.586740 | 3.2:+77247051 | None:intergenic |
| TATGTGCAGACAGTGAAGGC+CGG | 0.586771 | 3.2:-77243007 | MS.gene06894:intron |
| TCCCGAAGCCGAAGCTGAGT+CGG | 0.589483 | 3.2:-77246993 | MS.gene06894:CDS |
| ACCTTCTCCTCTCAAAATGA+CGG | 0.595594 | 3.2:-77246735 | MS.gene06894:CDS |
| GAAATATGTGCAGACAGTGA+AGG | 0.596575 | 3.2:-77243011 | MS.gene06894:intron |
| ATCCATTCAGAAGACAATGA+TGG | 0.596681 | 3.2:-77242568 | MS.gene06894:CDS |
| TTCTGCATTGCATCCTCAGG+AGG | 0.597440 | 3.2:+77245789 | None:intergenic |
| ACTCAGCTTCGGCTTCGGGA+CGG | 0.601526 | 3.2:+77246996 | None:intergenic |
| CACGTAACAGCGTAATGCAG+TGG | 0.604125 | 3.2:+77242637 | None:intergenic |
| GTGACATCTGTAGTTCTAAG+TGG | 0.612750 | 3.2:-77242534 | MS.gene06894:CDS |
| AGAAGTAAAACCGGCGACGG+TGG | 0.613500 | 3.2:-77245474 | MS.gene06894:CDS |
| CTTCTGCGAAAGCCGGTCCG+CGG | 0.613659 | 3.2:+77246832 | None:intergenic |
| GTTGTTGAATGAAACGACGA+TGG | 0.619984 | 3.2:+77247111 | None:intergenic |
| AATGTCACAGAGCTGCTGGT+TGG | 0.620200 | 3.2:-77242948 | MS.gene06894:CDS |
| TTGTATAAGATTGCTACTGA+AGG | 0.622050 | 3.2:-77246776 | MS.gene06894:CDS |
| TTTGTTTACGAAGAGGAATG+TGG | 0.624188 | 3.2:-77245402 | MS.gene06894:CDS |
| GAAGTACATTGACATTGTGT+CGG | 0.625855 | 3.2:-77245769 | MS.gene06894:CDS |
| CATTCACGGATTTGCTAGAG+AGG | 0.627592 | 3.2:-77244061 | MS.gene06894:CDS |
| GAGTCGGTTATGGCTGAGCA+AGG | 0.627643 | 3.2:-77246977 | MS.gene06894:CDS |
| GAATGCTGATGTAAATGCCA+AGG | 0.631032 | 3.2:-77242922 | MS.gene06894:intron |
| ATTCACGGATTTGCTAGAGA+GGG | 0.635621 | 3.2:-77244060 | MS.gene06894:CDS |
| CGATCCACAGCCCAGTGTAG+CGG | 0.638544 | 3.2:+77242981 | None:intergenic |
| GGCCCAAGTTCAGAGGCTCG+GGG | 0.645540 | 3.2:-77245450 | MS.gene06894:CDS |
| GGTAAGAGAAGATTAAACCG+AGG | 0.648737 | 3.2:+77247152 | None:intergenic |
| GGAGAGTACTGAATTAGATG+AGG | 0.670681 | 3.2:-77246891 | MS.gene06894:CDS |
| CAGAGAAGTAAAACCGGCGA+CGG | 0.678218 | 3.2:-77245477 | MS.gene06894:CDS |
| AGAAACGAAAGCGTTGACGG+TGG | 0.679861 | 3.2:-77246947 | MS.gene06894:CDS |
| GATTATGATGATGATTGGGA+AGG | 0.681559 | 3.2:-77246917 | MS.gene06894:CDS |
| ATTGGGTGCTATGCCTCCTG+AGG | 0.688948 | 3.2:-77245802 | MS.gene06894:CDS |
| GTGGCCGTTTATGCAGCATG+AGG | 0.693675 | 3.2:-77242515 | MS.gene06894:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGACATTATTTAAATGTA+CGG | - | chr3.2:77245465-77245484 | MS.gene06894:CDS | 15.0% |
| !! | ATCATTTGTGTAAATAAAAA+AGG | + | chr3.2:77245330-77245349 | None:intergenic | 15.0% |
| !!! | AACATAAACTTAAATTTTAG+CGG | - | chr3.2:77245877-77245896 | MS.gene06894:intron | 15.0% |
| !!! | TTATTTTATCTTAAGTCTTT+TGG | - | chr3.2:77245787-77245806 | MS.gene06894:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTGTCCTT+GGG | - | chr3.2:77243168-77243187 | MS.gene06894:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGTCCT+TGG | - | chr3.2:77243167-77243186 | MS.gene06894:intron | 15.0% |
| !! | AAACTAAGAAAAACTATAAG+AGG | - | chr3.2:77243468-77243487 | MS.gene06894:intron | 20.0% |
| !! | AATACAAATACATCCAAAAT+AGG | + | chr3.2:77243218-77243237 | None:intergenic | 20.0% |
| !! | ATAAATTCATAACCAATTAG+TGG | + | chr3.2:77244396-77244415 | None:intergenic | 20.0% |
| !! | ATAGGTCTTTATATATTACA+CGG | - | chr3.2:77244642-77244661 | MS.gene06894:intron | 20.0% |
| !! | ATTTGTGTAAATAAAAAAGG+TGG | + | chr3.2:77245327-77245346 | None:intergenic | 20.0% |
| !! | TTTCAAAGTTAAAACTAAGA+AGG | + | chr3.2:77244912-77244931 | None:intergenic | 20.0% |
| !!! | AGTCTTTTATTTTGAGAAAT+AGG | - | chr3.2:77243702-77243721 | MS.gene06894:intron | 20.0% |
| !!! | ATATGTATATTTCAGTGTTT+TGG | - | chr3.2:77245926-77245945 | MS.gene06894:intron | 20.0% |
| !!! | ATATTAATTTGATAAACCTC+TGG | + | chr3.2:77246612-77246631 | None:intergenic | 20.0% |
| !!! | ATTTTATTGAAGATTTAGAG+AGG | - | chr3.2:77243306-77243325 | MS.gene06894:intron | 20.0% |
| !!! | CACTATTTCTTTCTATAAAA+GGG | - | chr3.2:77244084-77244103 | MS.gene06894:intron | 20.0% |
| !!! | GCTAATTTTTTATAACTGAA+AGG | + | chr3.2:77246096-77246115 | None:intergenic | 20.0% |
| !!! | GGTTATTTTGTTAATTGTTT+TGG | - | chr3.2:77243824-77243843 | MS.gene06894:intron | 20.0% |
| !!! | TCACTATTTCTTTCTATAAA+AGG | - | chr3.2:77244083-77244102 | MS.gene06894:intron | 20.0% |
| ! | AACGCATATTGTTAAAGAAA+AGG | + | chr3.2:77246662-77246681 | None:intergenic | 25.0% |
| ! | AAGAATGCTGAAGATATTTA+TGG | + | chr3.2:77246563-77246582 | None:intergenic | 25.0% |
| ! | AATAAAAGACTTGTGTATGT+TGG | + | chr3.2:77243693-77243712 | None:intergenic | 25.0% |
| ! | AATATACATATGCTTGTGTT+AGG | + | chr3.2:77245917-77245936 | None:intergenic | 25.0% |
| ! | ACAAGATCAATCATTTCTTA+AGG | + | chr3.2:77246325-77246344 | None:intergenic | 25.0% |
| ! | AGAATGCTGAAGATATTTAT+GGG | + | chr3.2:77246562-77246581 | None:intergenic | 25.0% |
| ! | ATAAAGACCTATCATTTGAT+AGG | + | chr3.2:77244634-77244653 | None:intergenic | 25.0% |
| ! | ATAACAAGACAAATTTAGGA+AGG | + | chr3.2:77244853-77244872 | None:intergenic | 25.0% |
| ! | ATAACTGAATTGACATTACA+TGG | - | chr3.2:77246042-77246061 | MS.gene06894:intron | 25.0% |
| ! | ATCAAAAGGCAACAATTTAT+TGG | - | chr3.2:77245552-77245571 | MS.gene06894:intron | 25.0% |
| ! | CAAAATGCCAATAGTTTAAT+GGG | + | chr3.2:77245383-77245402 | None:intergenic | 25.0% |
| ! | GCACTATTTAAATTAACGTT+TGG | - | chr3.2:77243245-77243264 | MS.gene06894:intron | 25.0% |
| ! | GCATATAACAAGACAAATTT+AGG | + | chr3.2:77244857-77244876 | None:intergenic | 25.0% |
| ! | GGGTTAATAGTGTATATATT+TGG | - | chr3.2:77243101-77243120 | MS.gene06894:intron | 25.0% |
| ! | TAAAGACCTATCATTTGATA+GGG | + | chr3.2:77244633-77244652 | None:intergenic | 25.0% |
| ! | TAACAAGACAAATTTAGGAA+GGG | + | chr3.2:77244852-77244871 | None:intergenic | 25.0% |
| ! | TAATGAGTTAGATCGAAATA+TGG | - | chr3.2:77243515-77243534 | MS.gene06894:intron | 25.0% |
| ! | TAGAATACGCATAAAATCTT+TGG | - | chr3.2:77245134-77245153 | MS.gene06894:intron | 25.0% |
| ! | TATCTTCCTTTATAGGAAAA+TGG | - | chr3.2:77245609-77245628 | MS.gene06894:intron | 25.0% |
| ! | TCAAAAGGCAACAATTTATT+GGG | - | chr3.2:77245553-77245572 | MS.gene06894:intron | 25.0% |
| ! | TCAACTTTCTATCTTCAAAT+AGG | + | chr3.2:77246019-77246038 | None:intergenic | 25.0% |
| ! | TCTTCAAGTGGTAATTATAA+CGG | - | chr3.2:77244490-77244509 | MS.gene06894:intron | 25.0% |
| ! | TGCATAATGTAGTATAGTTT+AGG | - | chr3.2:77246934-77246953 | MS.gene06894:CDS | 25.0% |
| ! | TGTAGAAGACAATAAAAGAA+AGG | - | chr3.2:77243046-77243065 | MS.gene06894:intron | 25.0% |
| !! | AAAAATTATTGAGTTGCAGA+AGG | + | chr3.2:77245014-77245033 | None:intergenic | 25.0% |
| !! | AATTTGTCTTGTTATATGCT+AGG | - | chr3.2:77244858-77244877 | MS.gene06894:intron | 25.0% |
| !! | ACATTACGCAACAATTTTAA+AGG | - | chr3.2:77243080-77243099 | MS.gene06894:intron | 25.0% |
| !! | ACTATTGGCACTTTAAAAAT+GGG | - | chr3.2:77246247-77246266 | MS.gene06894:intron | 25.0% |
| !! | AGGTTACTTTATTAATCAGT+AGG | - | chr3.2:77245430-77245449 | MS.gene06894:CDS | 25.0% |
| !! | ATAGATTCTTTAGCCTATTT+TGG | - | chr3.2:77243202-77243221 | MS.gene06894:intron | 25.0% |
| !! | ATAGTATTGAATGAATACCT+TGG | + | chr3.2:77246795-77246814 | None:intergenic | 25.0% |
| !! | ATCTTCAAATAGGCATTTTT+AGG | + | chr3.2:77246009-77246028 | None:intergenic | 25.0% |
| !! | ATGATGATTATGATGATGAT+TGG | - | chr3.2:77242775-77242794 | MS.gene06894:intron | 25.0% |
| !! | CACTATTTCTTTCTATACAA+GGG | - | chr3.2:77244027-77244046 | MS.gene06894:CDS | 25.0% |
| !! | CATTACGCAACAATTTTAAA+GGG | - | chr3.2:77243081-77243100 | MS.gene06894:intron | 25.0% |
| !! | GCTTCTTTATCTTTTCTTAA+AGG | - | chr3.2:77244783-77244802 | MS.gene06894:intron | 25.0% |
| !! | TAACTGTTTAGAATGAAAAC+AGG | - | chr3.2:77246868-77246887 | MS.gene06894:CDS | 25.0% |
| !! | TCACTATTTCTTTCTATACA+AGG | - | chr3.2:77244026-77244045 | MS.gene06894:CDS | 25.0% |
| !! | TGATGATTATGATGATGATT+GGG | - | chr3.2:77242776-77242795 | MS.gene06894:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | - | chr3.2:77243535-77243554 | MS.gene06894:intron | 25.0% |
| !!! | AAATCTTTGGTTTGCTTTTA+TGG | - | chr3.2:77245147-77245166 | MS.gene06894:intron | 25.0% |
| !!! | CTGCAACTCAATAATTTTTT+TGG | - | chr3.2:77245015-77245034 | MS.gene06894:intron | 25.0% |
| !!! | GTTTTTTCCCATTAAACTAT+TGG | - | chr3.2:77245373-77245392 | MS.gene06894:intron | 25.0% |
| !!! | TCTGATGTTTTCTTTTTTGA+AGG | - | chr3.2:77247020-77247039 | MS.gene06894:CDS | 25.0% |
| !!! | TCTTTTTTGAAGGATAATGA+TGG | - | chr3.2:77247030-77247049 | MS.gene06894:CDS | 25.0% |
| AAAAAAGGTGGTTCAAAAGA+AGG | + | chr3.2:77245315-77245334 | None:intergenic | 30.0% | |
| AAAGACCTATCATTTGATAG+GGG | + | chr3.2:77244632-77244651 | None:intergenic | 30.0% | |
| AACAAGACAAATTTAGGAAG+GGG | + | chr3.2:77244851-77244870 | None:intergenic | 30.0% | |
| ATGTAGTATAGTTTAGGCTT+TGG | - | chr3.2:77246940-77246959 | MS.gene06894:CDS | 30.0% | |
| CCAAAATGCCAATAGTTTAA+TGG | + | chr3.2:77245384-77245403 | None:intergenic | 30.0% | |
| CTGCTATTAAAAACTCATAG+AGG | + | chr3.2:77243145-77243164 | None:intergenic | 30.0% | |
| GATACACTCAAAGTGATAAT+AGG | - | chr3.2:77244886-77244905 | MS.gene06894:intron | 30.0% | |
| GGGAGAATGATGTATTTAAA+AGG | - | chr3.2:77244104-77244123 | MS.gene06894:intron | 30.0% | |
| GTCTTTATATATTACACGGT+TGG | - | chr3.2:77244646-77244665 | MS.gene06894:intron | 30.0% | |
| GTTTCGTTATCTTCCTTTAT+AGG | - | chr3.2:77245602-77245621 | MS.gene06894:intron | 30.0% | |
| TAAACAAAAGAGCTGAATAC+TGG | + | chr3.2:77244283-77244302 | None:intergenic | 30.0% | |
| TAAATTAACGTTTGGATGAG+CGG | - | chr3.2:77243253-77243272 | MS.gene06894:intron | 30.0% | |
| TCGTAGATCTCTACTAATTT+GGG | - | chr3.2:77246430-77246449 | MS.gene06894:intron | 30.0% | |
| TCTATTTGAACTTATACCCA+AGG | + | chr3.2:77243187-77243206 | None:intergenic | 30.0% | |
| TGAAGGATAATGTATACACT+TGG | + | chr3.2:77245744-77245763 | None:intergenic | 30.0% | |
| TGATGATATCTTGGTTCATT+GGG | + | chr3.2:77245212-77245231 | None:intergenic | 30.0% | |
| TGTAGTATAGTTTAGGCTTT+GGG | - | chr3.2:77246941-77246960 | MS.gene06894:CDS | 30.0% | |
| TGTTGAAGACACTAAAGTTA+TGG | + | chr3.2:77246294-77246313 | None:intergenic | 30.0% | |
| TTACATGGAATTAATCTTGC+TGG | - | chr3.2:77246057-77246076 | MS.gene06894:intron | 30.0% | |
| TTATGTTGTCATACTGAAGT+CGG | + | chr3.2:77245864-77245883 | None:intergenic | 30.0% | |
| TTGTATAAGATTGCTACTGA+AGG | - | chr3.2:77242921-77242940 | MS.gene06894:intron | 30.0% | |
| TTTCAAATTTGAACAGAGCA+AGG | - | chr3.2:77244952-77244971 | MS.gene06894:intron | 30.0% | |
| TTTCTAAGCTTTGCATCATA+GGG | - | chr3.2:77245109-77245128 | MS.gene06894:intron | 30.0% | |
| ! | AGAAAAACCAGACATCATTT+TGG | - | chr3.2:77244704-77244723 | MS.gene06894:intron | 30.0% |
| ! | CACTATTGGCACTTTAAAAA+TGG | - | chr3.2:77246246-77246265 | MS.gene06894:intron | 30.0% |
| ! | CCATTAAACTATTGGCATTT+TGG | - | chr3.2:77245381-77245400 | MS.gene06894:intron | 30.0% |
| ! | CTTCTTCAATCAATTTTCCT+CGG | - | chr3.2:77242528-77242547 | MS.gene06894:CDS | 30.0% |
| ! | TCAATTTAGAGCACAAGAAA+CGG | + | chr3.2:77244002-77244021 | None:intergenic | 30.0% |
| ! | TGTTTAGAATGAAAACAGGA+TGG | - | chr3.2:77246872-77246891 | MS.gene06894:CDS | 30.0% |
| ! | TTAAACTATTGGCATTTTGG+AGG | - | chr3.2:77245384-77245403 | MS.gene06894:intron | 30.0% |
| ! | TTTAAATGTACGGAGTACTA+AGG | - | chr3.2:77245475-77245494 | MS.gene06894:CDS | 30.0% |
| !! | CTTTATTATTTTGCCCATAG+AGG | - | chr3.2:77246457-77246476 | MS.gene06894:intron | 30.0% |
| !!! | ATGTTTTAATGCATTCCTTC+AGG | - | chr3.2:77246815-77246834 | MS.gene06894:CDS | 30.0% |
| !!! | TGTTTTAATGCATTCCTTCA+GGG | - | chr3.2:77246816-77246835 | MS.gene06894:CDS | 30.0% |
| !!! | TTAGTTTTATCAAGCATGCT+TGG | + | chr3.2:77245246-77245265 | None:intergenic | 30.0% |
| AAACAGGATGGAACTTTAGT+TGG | - | chr3.2:77246884-77246903 | MS.gene06894:CDS | 35.0% | |
| AAATGACTGCATGCAATTGT+TGG | + | chr3.2:77243757-77243776 | None:intergenic | 35.0% | |
| AAGACAGACATAGCTCATTT+AGG | + | chr3.2:77246139-77246158 | None:intergenic | 35.0% | |
| AAGATTTAGAGAGGAAGTTG+GGG | - | chr3.2:77243315-77243334 | MS.gene06894:intron | 35.0% | |
| AAGGAGACAGATTAATGAGA+AGG | + | chr3.2:77245276-77245295 | None:intergenic | 35.0% | |
| AATATTGCTTTGTGGGTTTC+TGG | - | chr3.2:77244977-77244996 | MS.gene06894:intron | 35.0% | |
| AATTAAGCCAATAGTGCAGA+TGG | + | chr3.2:77246847-77246866 | None:intergenic | 35.0% | |
| AGAATCCATAGCTGAATACT+TGG | - | chr3.2:77247089-77247108 | MS.gene06894:CDS | 35.0% | |
| AGCTTAAGTGAAGAATTAGC+TGG | - | chr3.2:77246113-77246132 | MS.gene06894:intron | 35.0% | |
| AGGAGACAGATTAATGAGAA+GGG | + | chr3.2:77245275-77245294 | None:intergenic | 35.0% | |
| AGGATAGTCAGATCACTAAA+GGG | - | chr3.2:77243439-77243458 | MS.gene06894:intron | 35.0% | |
| AGTAGTGAGAGTAGATCAAA+TGG | - | chr3.2:77243416-77243435 | MS.gene06894:intron | 35.0% | |
| AGTGGGAGTGAAAGTTAAAA+TGG | + | chr3.2:77246178-77246197 | None:intergenic | 35.0% | |
| ATCCATTCAGAAGACAATGA+TGG | - | chr3.2:77247129-77247148 | MS.gene06894:CDS | 35.0% | |
| ATTATGCAACTTATGCAGTG+AGG | + | chr3.2:77246922-77246941 | None:intergenic | 35.0% | |
| CAAGGACAATATTGCTTTGT+GGG | - | chr3.2:77244970-77244989 | MS.gene06894:intron | 35.0% | |
| CATGTTACCAAAATGATGTC+TGG | + | chr3.2:77244714-77244733 | None:intergenic | 35.0% | |
| CTACTAAAGTGTATCGAAAG+TGG | - | chr3.2:77245673-77245692 | MS.gene06894:intron | 35.0% | |
| CTCGTAGATCTCTACTAATT+TGG | - | chr3.2:77246429-77246448 | MS.gene06894:intron | 35.0% | |
| CTTTGACAGAGAAGTAAAAC+CGG | - | chr3.2:77244214-77244233 | MS.gene06894:intron | 35.0% | |
| GAACCAAGATATCATCACTT+TGG | - | chr3.2:77245215-77245234 | MS.gene06894:intron | 35.0% | |
| GAAGATTTAGAGAGGAAGTT+GGG | - | chr3.2:77243314-77243333 | MS.gene06894:intron | 35.0% | |
| GAAGTACATTGACATTGTGT+CGG | - | chr3.2:77243928-77243947 | MS.gene06894:intron | 35.0% | |
| GCAAAAGATTCAGTCAACAA+AGG | + | chr3.2:77244598-77244617 | None:intergenic | 35.0% | |
| GGAGTTTCAGTGAATTTGAA+GGG | - | chr3.2:77245694-77245713 | MS.gene06894:intron | 35.0% | |
| GTATACCACAGATTCACTAT+TGG | - | chr3.2:77246232-77246251 | MS.gene06894:intron | 35.0% | |
| GTGATGATATCTTGGTTCAT+TGG | + | chr3.2:77245213-77245232 | None:intergenic | 35.0% | |
| GTTTCTAAGCTTTGCATCAT+AGG | - | chr3.2:77245108-77245127 | MS.gene06894:intron | 35.0% | |
| TAGATCTCTACTAATTTGGG+AGG | - | chr3.2:77246433-77246452 | MS.gene06894:intron | 35.0% | |
| TAGCACCTATAGTAGAAAGA+TGG | - | chr3.2:77243338-77243357 | MS.gene06894:intron | 35.0% | |
| TATACCCTTCAACTTTCTGT+AGG | - | chr3.2:77243858-77243877 | MS.gene06894:intron | 35.0% | |
| TCAAAGAAACAACACGAGTT+GGG | + | chr3.2:77244200-77244219 | None:intergenic | 35.0% | |
| TCTCTTGCATCTTTGTACTT+AGG | - | chr3.2:77246204-77246223 | MS.gene06894:intron | 35.0% | |
| TGAACAAAAGCTGCTAATGA+GGG | + | chr3.2:77245831-77245850 | None:intergenic | 35.0% | |
| TGAAGATTTAGAGAGGAAGT+TGG | - | chr3.2:77243313-77243332 | MS.gene06894:intron | 35.0% | |
| TGGAGTTTCAGTGAATTTGA+AGG | - | chr3.2:77245693-77245712 | MS.gene06894:intron | 35.0% | |
| TGTTAGAAGAGCCAAATCAA+AGG | + | chr3.2:77245178-77245197 | None:intergenic | 35.0% | |
| TTAATGGGAAAAAACACACG+TGG | + | chr3.2:77245368-77245387 | None:intergenic | 35.0% | |
| TTATGGAGAGTCCTTTGATT+TGG | - | chr3.2:77245164-77245183 | MS.gene06894:intron | 35.0% | |
| TTCCACCATCTTTCTACTAT+AGG | + | chr3.2:77243346-77243365 | None:intergenic | 35.0% | |
| TTCTAAGCTTTGCATCATAG+GGG | - | chr3.2:77245110-77245129 | MS.gene06894:intron | 35.0% | |
| TTGATAGACCTCCTAAGAAT+CGG | + | chr3.2:77244518-77244537 | None:intergenic | 35.0% | |
| TTGCATCTTTGTACTTAGGA+AGG | - | chr3.2:77246208-77246227 | MS.gene06894:intron | 35.0% | |
| TTTGTTTACGAAGAGGAATG+TGG | - | chr3.2:77244295-77244314 | MS.gene06894:intron | 35.0% | |
| ! | ATGTTCAGCTTCAGCTTTAT+GGG | - | chr3.2:77242898-77242917 | MS.gene06894:intron | 35.0% |
| ! | ATTTGAGATAGCCAGAATCA+TGG | + | chr3.2:77243659-77243678 | None:intergenic | 35.0% |
| ! | GATTATGATGATGATTGGGA+AGG | - | chr3.2:77242780-77242799 | MS.gene06894:intron | 35.0% |
| ! | TCTTGTTATATGCTAGGCTT+TGG | - | chr3.2:77244864-77244883 | MS.gene06894:intron | 35.0% |
| ! | TGGATATGAGTTTTGCAAGA+AGG | + | chr3.2:77242569-77242588 | None:intergenic | 35.0% |
| ! | TGGCATCCATTTTCCTATAA+AGG | + | chr3.2:77245618-77245637 | None:intergenic | 35.0% |
| !! | ATAGTTTAGGCTTTGGGATA+TGG | - | chr3.2:77246947-77246966 | MS.gene06894:CDS | 35.0% |
| !! | CATTTTGGAGGAATGATTTC+AGG | - | chr3.2:77245396-77245415 | MS.gene06894:CDS | 35.0% |
| !! | GTTTTAATGCATTCCTTCAG+GGG | - | chr3.2:77246817-77246836 | MS.gene06894:CDS | 35.0% |
| !! | TATTATTTTGCCCATAGAGG+AGG | - | chr3.2:77246460-77246479 | MS.gene06894:intron | 35.0% |
| !! | TTTGTGGGTTTCTGGAATTA+AGG | - | chr3.2:77244985-77245004 | MS.gene06894:intron | 35.0% |
| AAACTAGGCTTAGGTGGTTT+GGG | - | chr3.2:77243364-77243383 | MS.gene06894:intron | 40.0% | |
| AACAAAGGCAAGACTAGAGA+AGG | + | chr3.2:77244583-77244602 | None:intergenic | 40.0% | |
| AAGTGCCAATAGTGAATCTG+TGG | + | chr3.2:77246240-77246259 | None:intergenic | 40.0% | |
| ACAAAGGCAAGACTAGAGAA+GGG | + | chr3.2:77244582-77244601 | None:intergenic | 40.0% | |
| ACCTTCTCCTCTCAAAATGA+CGG | - | chr3.2:77242962-77242981 | MS.gene06894:CDS | 40.0% | |
| AGGAAAATGGATGCCATTCA+CGG | - | chr3.2:77245622-77245641 | MS.gene06894:intron | 40.0% | |
| AGTGAGAGTAGATCAAATGG+AGG | - | chr3.2:77243419-77243438 | MS.gene06894:intron | 40.0% | |
| ATAACCATACTTGACCAGGT+AGG | + | chr3.2:77243782-77243801 | None:intergenic | 40.0% | |
| CACCTATAGTAGAAAGATGG+TGG | - | chr3.2:77243341-77243360 | MS.gene06894:intron | 40.0% | |
| CCAAGATATCATCACTTTGG+AGG | - | chr3.2:77245218-77245237 | MS.gene06894:intron | 40.0% | |
| CCTCCAAAGTGATGATATCT+TGG | + | chr3.2:77245221-77245240 | None:intergenic | 40.0% | |
| CGTGAAGCTTCTTCATCAAA+AGG | - | chr3.2:77245538-77245557 | MS.gene06894:intron | 40.0% | |
| CTGAACAAAAGCTGCTAATG+AGG | + | chr3.2:77245832-77245851 | None:intergenic | 40.0% | |
| CTGCATATATCACCTGTAGA+TGG | - | chr3.2:77244363-77244382 | MS.gene06894:intron | 40.0% | |
| CTTCACCAAGTATTCAGCTA+TGG | + | chr3.2:77247097-77247116 | None:intergenic | 40.0% | |
| CTTGATGTATCCTCCTCTAT+GGG | + | chr3.2:77246473-77246492 | None:intergenic | 40.0% | |
| CTTGCCTACAGAAAGTTGAA+GGG | + | chr3.2:77243865-77243884 | None:intergenic | 40.0% | |
| GAAATATGTGCAGACAGTGA+AGG | - | chr3.2:77246686-77246705 | MS.gene06894:intron | 40.0% | |
| GAATGCTGATGTAAATGCCA+AGG | - | chr3.2:77246775-77246794 | MS.gene06894:CDS | 40.0% | |
| GAGGATAGTCAGATCACTAA+AGG | - | chr3.2:77243438-77243457 | MS.gene06894:intron | 40.0% | |
| GATGTTCAGCTTCAGCTTTA+TGG | - | chr3.2:77242897-77242916 | MS.gene06894:intron | 40.0% | |
| GATTTCAGGAACTGATCACA+AGG | - | chr3.2:77245410-77245429 | MS.gene06894:CDS | 40.0% | |
| GCAAGGACAATATTGCTTTG+TGG | - | chr3.2:77244969-77244988 | MS.gene06894:intron | 40.0% | |
| GGTAAGAGAAGATTAAACCG+AGG | + | chr3.2:77242548-77242567 | None:intergenic | 40.0% | |
| GTCAAAGAAACAACACGAGT+TGG | + | chr3.2:77244201-77244220 | None:intergenic | 40.0% | |
| GTTGTTGAATGAAACGACGA+TGG | + | chr3.2:77242589-77242608 | None:intergenic | 40.0% | |
| TAACTACTGGAGAGACATCA+GGG | + | chr3.2:77244457-77244476 | None:intergenic | 40.0% | |
| TACTGAAGGTCCTTGTAGTA+CGG | - | chr3.2:77242935-77242954 | MS.gene06894:CDS | 40.0% | |
| TCTCAAAAAGCCTCAGCAAT+TGG | - | chr3.2:77245983-77246002 | MS.gene06894:intron | 40.0% | |
| TCTCCAGTAGTTAGATTGGT+GGG | - | chr3.2:77244464-77244483 | MS.gene06894:intron | 40.0% | |
| TCTTCCTCATGCTGCATAAA+CGG | + | chr3.2:77247189-77247208 | None:intergenic | 40.0% | |
| TCTTGATGTATCCTCCTCTA+TGG | + | chr3.2:77246474-77246493 | None:intergenic | 40.0% | |
| TGATAGACCTCCTAAGAATC+GGG | + | chr3.2:77244517-77244536 | None:intergenic | 40.0% | |
| TGCCATCATTGTCTTCTGAA+TGG | + | chr3.2:77247134-77247153 | None:intergenic | 40.0% | |
| TGTATCATCGTGTGAAACGA+CGG | + | chr3.2:77242649-77242668 | None:intergenic | 40.0% | |
| TGTCGGAACTATATCCTACT+TGG | - | chr3.2:77243945-77243964 | MS.gene06894:intron | 40.0% | |
| TGTCTCTCCAGTAGTTAGAT+TGG | - | chr3.2:77244460-77244479 | MS.gene06894:intron | 40.0% | |
| TTATAACGGTCCCGATTCTT+AGG | - | chr3.2:77244504-77244523 | MS.gene06894:intron | 40.0% | |
| ! | CTATATCCTACTTGGCTTGA+TGG | - | chr3.2:77243953-77243972 | MS.gene06894:intron | 40.0% |
| ! | GTGAGATTGATTCTCTACGA+AGG | - | chr3.2:77244548-77244567 | MS.gene06894:intron | 40.0% |
| ! | TAGCTTTTGCGCCAAAATCA+CGG | - | chr3.2:77243626-77243645 | MS.gene06894:intron | 40.0% |
| ! | TTTTCCTACCTGGTCAAGTA+TGG | - | chr3.2:77243775-77243794 | MS.gene06894:intron | 40.0% |
| !! | ATCAGAAACGAAAGCGTTGA+CGG | - | chr3.2:77242747-77242766 | MS.gene06894:intron | 40.0% |
| !! | ATTCACGGATTTGCTAGAGA+GGG | - | chr3.2:77245637-77245656 | MS.gene06894:intron | 40.0% |
| !! | CAGCTCTTTTGTTTACGAAG+AGG | - | chr3.2:77244288-77244307 | MS.gene06894:intron | 40.0% |
| !! | CATTTTTAGGCCAATTGCTG+AGG | + | chr3.2:77245996-77246015 | None:intergenic | 40.0% |
| !! | GGAGAGTACTGAATTAGATG+AGG | - | chr3.2:77242806-77242825 | MS.gene06894:intron | 40.0% |
| !! | GTAGAAAGATGGTGGAAACT+AGG | - | chr3.2:77243349-77243368 | MS.gene06894:intron | 40.0% |
| !! | GTGACATCTGTAGTTCTAAG+TGG | - | chr3.2:77247163-77247182 | MS.gene06894:CDS | 40.0% |
| !!! | ATGCAGTCATTTTTCCTACC+TGG | - | chr3.2:77243765-77243784 | MS.gene06894:intron | 40.0% |
| AAATGACGGCTCGTGCTAAA+TGG | - | chr3.2:77242976-77242995 | MS.gene06894:CDS | 45.0% | |
| AACAACTTGCAGCACACTGA+AGG | + | chr3.2:77245761-77245780 | None:intergenic | 45.0% | |
| ACGGCTTATTAGCTCACCAA+AGG | + | chr3.2:77243983-77244002 | None:intergenic | 45.0% | |
| AGATGCAAGAGAGATGCAAG+TGG | + | chr3.2:77246196-77246215 | None:intergenic | 45.0% | |
| AGTATGGTTATCTCGCTGTG+CGG | - | chr3.2:77243791-77243810 | MS.gene06894:intron | 45.0% | |
| AGTCAGATCACTAAAGGGAG+AGG | - | chr3.2:77243444-77243463 | MS.gene06894:intron | 45.0% | |
| ATGCCTTATCCCACCAAATG+AGG | + | chr3.2:77243584-77243603 | None:intergenic | 45.0% | |
| ATGTAGCCAACCTCATTTGG+TGG | - | chr3.2:77243571-77243590 | MS.gene06894:intron | 45.0% | |
| ATTGGTGGGATGTCTTCAAG+TGG | - | chr3.2:77244478-77244497 | MS.gene06894:intron | 45.0% | |
| CAAAGGCAAGACTAGAGAAG+GGG | + | chr3.2:77244581-77244600 | None:intergenic | 45.0% | |
| CAGCTCCCCTATCAAATGAT+AGG | - | chr3.2:77244624-77244643 | MS.gene06894:intron | 45.0% | |
| CATAACCAATTAGTGGCGCA+TGG | + | chr3.2:77244389-77244408 | None:intergenic | 45.0% | |
| CATCCCACCAATCTAACTAC+TGG | + | chr3.2:77244470-77244489 | None:intergenic | 45.0% | |
| CGAGATAACCATACTTGACC+AGG | + | chr3.2:77243786-77243805 | None:intergenic | 45.0% | |
| CTAACTACTGGAGAGACATC+AGG | + | chr3.2:77244458-77244477 | None:intergenic | 45.0% | |
| CTCTCCAGTAGTTAGATTGG+TGG | - | chr3.2:77244463-77244482 | MS.gene06894:intron | 45.0% | |
| CTCTCTAGCAAATCCGTGAA+TGG | + | chr3.2:77245638-77245657 | None:intergenic | 45.0% | |
| CTTATCCCACCAAATGAGGT+TGG | + | chr3.2:77243580-77243599 | None:intergenic | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr3.2:77243363-77243382 | MS.gene06894:intron | 45.0% | |
| GATAAGGCATGGTTGTGTAG+TGG | - | chr3.2:77243594-77243613 | MS.gene06894:intron | 45.0% | |
| GATGCAAGAGAGATGCAAGT+GGG | + | chr3.2:77246195-77246214 | None:intergenic | 45.0% | |
| GCTTGCCTACAGAAAGTTGA+AGG | + | chr3.2:77243866-77243885 | None:intergenic | 45.0% | |
| GGAAAAAACACACGTGGCAT+CGG | + | chr3.2:77245362-77245381 | None:intergenic | 45.0% | |
| GGGATTTCCATCTGCACTAT+TGG | - | chr3.2:77246837-77246856 | MS.gene06894:CDS | 45.0% | |
| TACTTCTGCATTGCATCCTC+AGG | + | chr3.2:77243914-77243933 | None:intergenic | 45.0% | |
| TCCATGTAGCCAACCTCATT+TGG | - | chr3.2:77243568-77243587 | MS.gene06894:intron | 45.0% | |
| TCGCTGTGCGGTAAAAAGAA+AGG | - | chr3.2:77243803-77243822 | MS.gene06894:intron | 45.0% | |
| TGTAGCCAACCTCATTTGGT+GGG | - | chr3.2:77243572-77243591 | MS.gene06894:intron | 45.0% | |
| ! | ACCAAATGAGGTTGGCTACA+TGG | + | chr3.2:77243572-77243591 | None:intergenic | 45.0% |
| ! | AGCTTTTGCGCCAAAATCAC+GGG | - | chr3.2:77243627-77243646 | MS.gene06894:intron | 45.0% |
| ! | CAACCTCATTTGGTGGGATA+AGG | - | chr3.2:77243578-77243597 | MS.gene06894:intron | 45.0% |
| ! | GTTTGGATGAGCGGTTAGTT+TGG | - | chr3.2:77243262-77243281 | MS.gene06894:intron | 45.0% |
| ! | TCATTTGGTGGGATAAGGCA+TGG | - | chr3.2:77243583-77243602 | MS.gene06894:intron | 45.0% |
| ! | TGATGATGATTGGGAAGGTG+TGG | - | chr3.2:77242785-77242804 | MS.gene06894:intron | 45.0% |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr3.2:77243355-77243374 | MS.gene06894:intron | 45.0% |
| !! | CATTCACGGATTTGCTAGAG+AGG | - | chr3.2:77245636-77245655 | MS.gene06894:intron | 45.0% |
| !!! | CTGCTTTTTGCAAAGCAGCT+TGG | - | chr3.2:77244747-77244766 | MS.gene06894:intron | 45.0% |
| !! | TAAAAATAATAAATTATTCT+AGG | + | chr3.2:77244674-77244693 | None:intergenic | 5.0% |
| AATGTCACAGAGCTGCTGGT+TGG | - | chr3.2:77246749-77246768 | MS.gene06894:CDS | 50.0% | |
| AGGCAAGCGTGGCAGAAATT+GGG | - | chr3.2:77243878-77243897 | MS.gene06894:intron | 50.0% | |
| CAACTTTCTGTAGGCAAGCG+TGG | - | chr3.2:77243867-77243886 | MS.gene06894:intron | 50.0% | |
| CACGTAACAGCGTAATGCAG+TGG | + | chr3.2:77247063-77247082 | None:intergenic | 50.0% | |
| CAGAGAAGTAAAACCGGCGA+CGG | - | chr3.2:77244220-77244239 | MS.gene06894:intron | 50.0% | |
| CCAGCAGCTCTGTGACATTA+AGG | + | chr3.2:77246748-77246767 | None:intergenic | 50.0% | |
| CCTTAATGTCACAGAGCTGC+TGG | - | chr3.2:77246745-77246764 | MS.gene06894:CDS | 50.0% | |
| GAAGGTTGAGCCGTACTACA+AGG | + | chr3.2:77242948-77242967 | None:intergenic | 50.0% | |
| GAGCTGAATACTGGTCCCAT+TGG | + | chr3.2:77244274-77244293 | None:intergenic | 50.0% | |
| TAACGGTCCCGATTCTTAGG+AGG | - | chr3.2:77244507-77244526 | MS.gene06894:intron | 50.0% | |
| TAGGCAAGCGTGGCAGAAAT+TGG | - | chr3.2:77243877-77243896 | MS.gene06894:intron | 50.0% | |
| TATGTGCAGACAGTGAAGGC+CGG | - | chr3.2:77246690-77246709 | MS.gene06894:intron | 50.0% | |
| TGCAGATGGAAATCCCCTGA+AGG | + | chr3.2:77246833-77246852 | None:intergenic | 50.0% | |
| TGGGCTTGTAGAGGGAAGAA+CGG | - | chr3.2:77243383-77243402 | MS.gene06894:intron | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+TGG | - | chr3.2:77243358-77243377 | MS.gene06894:intron | 50.0% | |
| TTCTGCATTGCATCCTCAGG+AGG | + | chr3.2:77243911-77243930 | None:intergenic | 50.0% | |
| ! | AGCCATAACCGACTCAGCTT+CGG | + | chr3.2:77242715-77242734 | None:intergenic | 50.0% |
| ! | AGGATGACAAAAGCGCGACA+AGG | + | chr3.2:77245295-77245314 | None:intergenic | 50.0% |
| ! | AGGTGGTTTGGGCTTGTAGA+GGG | - | chr3.2:77243375-77243394 | MS.gene06894:intron | 50.0% |
| ! | ATGGTGAGTCCCCGTGATTT+TGG | + | chr3.2:77243640-77243659 | None:intergenic | 50.0% |
| ! | GCTTTTGCGCCAAAATCACG+GGG | - | chr3.2:77243628-77243647 | MS.gene06894:intron | 50.0% |
| ! | TAGGTGGTTTGGGCTTGTAG+AGG | - | chr3.2:77243374-77243393 | MS.gene06894:intron | 50.0% |
| !! | AAACGAAAGCGTTGACGGTG+GGG | - | chr3.2:77242752-77242771 | MS.gene06894:intron | 50.0% |
| !! | AGAAACGAAAGCGTTGACGG+TGG | - | chr3.2:77242750-77242769 | MS.gene06894:intron | 50.0% |
| !! | ATTTTGCTGTCTCGTGCCAG+AGG | - | chr3.2:77246593-77246612 | MS.gene06894:intron | 50.0% |
| !! | GAAACGAAAGCGTTGACGGT+GGG | - | chr3.2:77242751-77242770 | MS.gene06894:intron | 50.0% |
| !! | GCCGTCATTTTGAGAGGAGA+AGG | + | chr3.2:77242966-77242985 | None:intergenic | 50.0% |
| !! | TTGGCTTGATGGTGCACCTT+TGG | - | chr3.2:77243964-77243983 | MS.gene06894:intron | 50.0% |
| ACGGGGACTCACCATGATTC+TGG | - | chr3.2:77243645-77243664 | MS.gene06894:intron | 55.0% | |
| AGAAGTAAAACCGGCGACGG+TGG | - | chr3.2:77244223-77244242 | MS.gene06894:intron | 55.0% | |
| AGCCGAAGCTGAGTCGGTTA+TGG | - | chr3.2:77242710-77242729 | MS.gene06894:intron | 55.0% | |
| ATCGTGTGAAACGACGGCGT+TGG | + | chr3.2:77242643-77242662 | None:intergenic | 55.0% | |
| GACGACGTCGTTTCTGATCC+CGG | - | chr3.2:77242675-77242694 | MS.gene06894:intron | 55.0% | |
| GAGTCGGTTATGGCTGAGCA+AGG | - | chr3.2:77242720-77242739 | MS.gene06894:intron | 55.0% | |
| GATGGCCATGCGCCACTAAT+TGG | - | chr3.2:77244381-77244400 | MS.gene06894:intron | 55.0% | |
| GCAAGACTAGAGAAGGGGAG+AGG | + | chr3.2:77244576-77244595 | None:intergenic | 55.0% | |
| GGTGCACCATCAAGCCAAGT+AGG | + | chr3.2:77243962-77243981 | None:intergenic | 55.0% | |
| GTGGCCGTTTATGCAGCATG+AGG | - | chr3.2:77247182-77247201 | MS.gene06894:CDS | 55.0% | |
| TCGACACCTTCTGCGAAAGC+CGG | + | chr3.2:77242875-77242894 | None:intergenic | 55.0% | |
| ! | AACCGACTCAGCTTCGGCTT+CGG | + | chr3.2:77242709-77242728 | None:intergenic | 55.0% |
| ! | ATTGGGTGCTATGCCTCCTG+AGG | - | chr3.2:77243895-77243914 | MS.gene06894:intron | 55.0% |
| !! | GCACGAGCCGTCATTTTGAG+AGG | + | chr3.2:77242972-77242991 | None:intergenic | 55.0% |
| ACTCAGCTTCGGCTTCGGGA+CGG | + | chr3.2:77242704-77242723 | None:intergenic | 60.0% | |
| AGTAAAACCGGCGACGGTGG+TGG | - | chr3.2:77244226-77244245 | MS.gene06894:intron | 60.0% | |
| AGTGGCGCATGGCCATCTAC+AGG | + | chr3.2:77244378-77244397 | None:intergenic | 60.0% | |
| CGATCCACAGCCCAGTGTAG+CGG | + | chr3.2:77246719-77246738 | None:intergenic | 60.0% | |
| CTACACTGGGCTGTGGATCG+TGG | - | chr3.2:77246719-77246738 | MS.gene06894:intron | 60.0% | |
| GTCCCCGAGCCTCTGAACTT+GGG | + | chr3.2:77244252-77244271 | None:intergenic | 60.0% | |
| GTGGCCCAAGTTCAGAGGCT+CGG | - | chr3.2:77244245-77244264 | MS.gene06894:intron | 60.0% | |
| TCAGAGGCTCGGGGACCAAT+GGG | - | chr3.2:77244256-77244275 | MS.gene06894:intron | 60.0% | |
| TCCCGAAGCCGAAGCTGAGT+CGG | - | chr3.2:77242704-77242723 | MS.gene06894:intron | 60.0% | |
| TGGCCCAAGTTCAGAGGCTC+GGG | - | chr3.2:77244246-77244265 | MS.gene06894:intron | 60.0% | |
| TTCAGAGGCTCGGGGACCAA+TGG | - | chr3.2:77244255-77244274 | MS.gene06894:intron | 60.0% | |
| ! | ACCGACTCAGCTTCGGCTTC+GGG | + | chr3.2:77242708-77242727 | None:intergenic | 60.0% |
| ! | TCACAGAGCTGCTGGTTGGC+AGG | - | chr3.2:77246753-77246772 | MS.gene06894:CDS | 60.0% |
| ! | TTTTGTTGCTGCTGCCGCCG+CGG | - | chr3.2:77242848-77242867 | MS.gene06894:intron | 60.0% |
| AAGGCCGGACACCGCTACAC+TGG | - | chr3.2:77246705-77246724 | MS.gene06894:intron | 65.0% | |
| AGGCCGGACACCGCTACACT+GGG | - | chr3.2:77246706-77246725 | MS.gene06894:intron | 65.0% | |
| CAGCCCAGTGTAGCGGTGTC+CGG | + | chr3.2:77246712-77246731 | None:intergenic | 65.0% | |
| CTTCTGCGAAAGCCGGTCCG+CGG | + | chr3.2:77242868-77242887 | None:intergenic | 65.0% | |
| GACACCGCTACACTGGGCTG+TGG | - | chr3.2:77246712-77246731 | MS.gene06894:intron | 65.0% | |
| GGCCCAAGTTCAGAGGCTCG+GGG | - | chr3.2:77244247-77244266 | MS.gene06894:intron | 65.0% | |
| GGTCCCCGAGCCTCTGAACT+TGG | + | chr3.2:77244253-77244272 | None:intergenic | 65.0% | |
| TTCGGCTTCGGGACGGTGTC+CGG | + | chr3.2:77242697-77242716 | None:intergenic | 65.0% | |
| ! | CGGTGGTGGCCCAAGTTCAG+AGG | - | chr3.2:77244240-77244259 | MS.gene06894:intron | 65.0% |
| ACTTGGGCCACCACCGTCGC+CGG | + | chr3.2:77244236-77244255 | None:intergenic | 70.0% | |
| TCGGCTTCGGGACGGTGTCC+GGG | + | chr3.2:77242696-77242715 | None:intergenic | 70.0% | |
| ! | CGCGGACCGGCTTTCGCAGA+AGG | - | chr3.2:77242866-77242885 | MS.gene06894:intron | 70.0% |
| CTGCGAAAGCCGGTCCGCGG+CGG | + | chr3.2:77242865-77242884 | None:intergenic | 75.0% | |
| TTGCTGCTGCCGCCGCGGAC+CGG | - | chr3.2:77242853-77242872 | MS.gene06894:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77242501 | 77247218 | 77242501 | ID=MS.gene06894 |
| chr3.2 | mRNA | 77242501 | 77247218 | 77242501 | ID=MS.gene06894.t1;Parent=MS.gene06894 |
| chr3.2 | exon | 77246722 | 77247218 | 77246722 | ID=MS.gene06894.t1.exon1;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77246722 | 77247218 | 77246722 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| chr3.2 | exon | 77245734 | 77245839 | 77245734 | ID=MS.gene06894.t1.exon2;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77245734 | 77245839 | 77245734 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| chr3.2 | exon | 77245393 | 77245496 | 77245393 | ID=MS.gene06894.t1.exon3;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77245393 | 77245496 | 77245393 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| chr3.2 | exon | 77244004 | 77244095 | 77244004 | ID=MS.gene06894.t1.exon4;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77244004 | 77244095 | 77244004 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| chr3.2 | exon | 77242923 | 77243020 | 77242923 | ID=MS.gene06894.t1.exon5;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77242923 | 77243020 | 77242923 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| chr3.2 | exon | 77242501 | 77242677 | 77242501 | ID=MS.gene06894.t1.exon6;Parent=MS.gene06894.t1 |
| chr3.2 | CDS | 77242501 | 77242677 | 77242501 | ID=cds.MS.gene06894.t1;Parent=MS.gene06894.t1 |
| Gene Sequence |
| Protein sequence |
