Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60313.t1 | XP_013457855.1 | 98.1 | 616 | 11 | 1 | 1 | 616 | 1 | 615 | 0.00E+00 | 1242.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60313.t1 | Q8RX55 | 61.4 | 661 | 193 | 10 | 13 | 616 | 17 | 672 | 4.6e-234 | 812.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60313.t1 | A0A072URC6 | 98.1 | 616 | 11 | 1 | 1 | 616 | 1 | 615 | 0.0e+00 | 1242.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050646 | MS.gene60313 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene60313 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene055147 | MS.gene60313 | 0.801362 | 9.33E-49 | -1.69E-46 |
| MS.gene055148 | MS.gene60313 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene055150 | MS.gene60313 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene05667 | MS.gene60313 | 0.803876 | 2.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60313.t1 | MTR_4g107360 | 98.052 | 616 | 11 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1264 |
| MS.gene60313.t1 | MTR_5g037300 | 67.598 | 537 | 155 | 3 | 99 | 616 | 107 | 643 | 0.0 | 774 |
| MS.gene60313.t1 | MTR_8g061960 | 61.672 | 574 | 199 | 2 | 60 | 616 | 83 | 652 | 0.0 | 756 |
| MS.gene60313.t1 | MTR_2g018770 | 57.356 | 537 | 209 | 4 | 99 | 616 | 154 | 689 | 0.0 | 665 |
| MS.gene60313.t1 | MTR_2g018770 | 54.988 | 431 | 176 | 2 | 99 | 511 | 154 | 584 | 1.74e-172 | 503 |
| MS.gene60313.t1 | MTR_4g123090 | 37.660 | 547 | 292 | 16 | 91 | 613 | 120 | 641 | 1.58e-109 | 343 |
| MS.gene60313.t1 | MTR_5g041210 | 35.915 | 568 | 338 | 15 | 59 | 616 | 86 | 637 | 3.88e-108 | 339 |
| MS.gene60313.t1 | MTR_5g041210 | 36.092 | 568 | 335 | 16 | 59 | 616 | 86 | 635 | 7.03e-107 | 336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60313.t1 | AT1G74800 | 61.422 | 661 | 193 | 10 | 13 | 616 | 17 | 672 | 0.0 | 823 |
| MS.gene60313.t1 | AT5G62620 | 60.752 | 665 | 200 | 8 | 13 | 616 | 17 | 681 | 0.0 | 823 |
| MS.gene60313.t1 | AT1G27120 | 61.214 | 593 | 193 | 9 | 55 | 616 | 87 | 673 | 0.0 | 737 |
| MS.gene60313.t1 | AT1G27120 | 61.214 | 593 | 193 | 9 | 55 | 616 | 56 | 642 | 0.0 | 736 |
| MS.gene60313.t1 | AT5G62620 | 58.725 | 596 | 186 | 7 | 13 | 548 | 17 | 612 | 0.0 | 709 |
| MS.gene60313.t1 | AT4G21060 | 56.111 | 540 | 214 | 5 | 99 | 616 | 203 | 741 | 0.0 | 648 |
| MS.gene60313.t1 | AT4G21060 | 56.111 | 540 | 214 | 5 | 99 | 616 | 146 | 684 | 0.0 | 647 |
| MS.gene60313.t1 | AT1G26810 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 1.29e-108 | 340 |
| MS.gene60313.t1 | AT1G26810 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 1.29e-108 | 340 |
| MS.gene60313.t1 | AT3G06440 | 35.529 | 501 | 277 | 12 | 128 | 613 | 149 | 618 | 3.65e-95 | 305 |
| MS.gene60313.t1 | AT3G06440 | 35.593 | 472 | 244 | 11 | 156 | 613 | 164 | 589 | 2.05e-89 | 289 |
| MS.gene60313.t1 | AT1G53290 | 24.887 | 221 | 150 | 6 | 371 | 582 | 89 | 302 | 9.88e-13 | 70.5 |
| MS.gene60313.t1 | AT2G26100 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 2.52e-11 | 66.2 |
| MS.gene60313.t1 | AT2G26100 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 3.26e-11 | 65.9 |
Find 167 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGCTTGTTCTCATTAAA+TGG | 0.078939 | 8.2:+18705759 | None:intergenic |
| AACCTTTGCGCTATGGTAAA+TGG | 0.171593 | 8.2:-18704837 | MS.gene60313:CDS |
| CCTCGATCGGTTTCGGTTAT+CGG | 0.177796 | 8.2:-18707532 | MS.gene60313:CDS |
| ACAGTGGCTATATGTGAATA+TGG | 0.238270 | 8.2:-18705091 | MS.gene60313:CDS |
| GATTCAATGGGTGCTTATAT+TGG | 0.242485 | 8.2:-18704880 | MS.gene60313:CDS |
| TTATTTGCAGTTGTTTAAAA+TGG | 0.255152 | 8.2:-18704238 | MS.gene60313:intron |
| GACCGATAATTGATACTCTT+TGG | 0.260484 | 8.2:+18707651 | None:intergenic |
| GTTTCGGAGCGGTTTGAATT+GGG | 0.283096 | 8.2:+18707578 | None:intergenic |
| CCGGGTCGTTTCTCGGGTTT+CGG | 0.287682 | 8.2:+18707562 | None:intergenic |
| GGTTTCGGAGCGGTTTGAAT+TGG | 0.314577 | 8.2:+18707577 | None:intergenic |
| AATTTGAGAAGCATAAATTA+AGG | 0.315817 | 8.2:-18704369 | MS.gene60313:CDS |
| TAAAATGGAAGATGTGAGTA+TGG | 0.343186 | 8.2:-18704223 | MS.gene60313:CDS |
| ATTCCATGTGGGTTGACGTT+AGG | 0.343305 | 8.2:-18707475 | MS.gene60313:CDS |
| AGCTTAAGATTCTGCCAGTT+TGG | 0.344065 | 8.2:-18704150 | MS.gene60313:CDS |
| CTCCAATCCCCTTTCAACCT+TGG | 0.344309 | 8.2:+18707331 | None:intergenic |
| ATTCAATGGGTGCTTATATT+GGG | 0.352784 | 8.2:-18704879 | MS.gene60313:CDS |
| TGCCAGTTTGGCTGTATAGA+AGG | 0.360397 | 8.2:-18704138 | MS.gene60313:CDS |
| CAAGGCAGATGATGTGCCTT+TGG | 0.360820 | 8.2:-18704089 | MS.gene60313:CDS |
| TTGAGCTTAATTCTTGCTAT+AGG | 0.365590 | 8.2:-18707294 | MS.gene60313:CDS |
| CATGACCCGGGTCGTTTCTC+GGG | 0.367277 | 8.2:+18707556 | None:intergenic |
| CAGAGGAGTTTGTATCAAAA+TGG | 0.367638 | 8.2:-18705836 | MS.gene60313:CDS |
| TAGTGGTGGGGCACGCCATC+TGG | 0.368521 | 8.2:+18705445 | None:intergenic |
| GTCATGTCCTCGATCGGTTT+CGG | 0.371149 | 8.2:-18707539 | MS.gene60313:CDS |
| TCAAAGATGGAAAACGCGTT+TGG | 0.379937 | 8.2:-18707630 | MS.gene60313:CDS |
| ACATGACCCGGGTCGTTTCT+CGG | 0.384566 | 8.2:+18707555 | None:intergenic |
| ATATAAGCACCCATTGAATC+TGG | 0.387504 | 8.2:+18704883 | None:intergenic |
| TTCCAAAGAGTATCAATTAT+CGG | 0.394580 | 8.2:-18707653 | MS.gene60313:CDS |
| ACCTTTGCGCTATGGTAAAT+GGG | 0.399165 | 8.2:-18704836 | MS.gene60313:CDS |
| GGCTCGTTTCTTTGTAGCAC+TGG | 0.401231 | 8.2:-18705303 | MS.gene60313:intron |
| TTCCATGTGGGTTGACGTTA+GGG | 0.406982 | 8.2:-18707474 | MS.gene60313:CDS |
| TTTGTTCTTACTGTTAGTGC+TGG | 0.408116 | 8.2:-18705738 | MS.gene60313:CDS |
| TACTGTTAGTGCTGGATTGG+AGG | 0.410336 | 8.2:-18705730 | MS.gene60313:CDS |
| CAGTGGCTATATGTGAATAT+GGG | 0.410795 | 8.2:-18705090 | MS.gene60313:CDS |
| AACCTTCTATACAGCCAAAC+TGG | 0.415858 | 8.2:+18704136 | None:intergenic |
| ATAGCTTGTTCTCATTAAAT+GGG | 0.417104 | 8.2:+18705760 | None:intergenic |
| TGAAGTGTGAGAAGTGGATT+GGG | 0.417442 | 8.2:-18705875 | MS.gene60313:CDS |
| TATGGTGGATAATCCTCTTC+AGG | 0.422986 | 8.2:+18704448 | None:intergenic |
| CTCGATCGGTTTCGGTTATC+GGG | 0.424447 | 8.2:-18707531 | MS.gene60313:CDS |
| CAGCCATCCGCTCAGCGAAA+TGG | 0.425039 | 8.2:+18705375 | None:intergenic |
| TCTTACTGTTAGTGCTGGAT+TGG | 0.429595 | 8.2:-18705733 | MS.gene60313:CDS |
| CAAGAATTAAGCTCAATAAC+AGG | 0.430167 | 8.2:+18707301 | None:intergenic |
| GGGTCGGAGTTTGCGGCGAA+TGG | 0.436397 | 8.2:-18707511 | MS.gene60313:CDS |
| TCAGCTTTGTGATGAGTACT+AGG | 0.439433 | 8.2:+18707718 | None:intergenic |
| AAGGCAGATGATGTGCCTTT+GGG | 0.441955 | 8.2:-18704088 | MS.gene60313:CDS |
| TCTCGGGCTGATCAAGATAC+TGG | 0.442369 | 8.2:-18707232 | MS.gene60313:intron |
| ATTTGAGAAGCATAAATTAA+GGG | 0.444140 | 8.2:-18704368 | MS.gene60313:intron |
| TACCATAGCGCAAAGGTTTG+TGG | 0.445602 | 8.2:+18704842 | None:intergenic |
| GATTATCCACCATATGCTAA+TGG | 0.446168 | 8.2:-18704439 | MS.gene60313:CDS |
| TGCTGCTGTGGAGAAATATT+AGG | 0.446378 | 8.2:+18705482 | None:intergenic |
| ACATCATCTGCCTTGGAGAT+TGG | 0.446915 | 8.2:+18704097 | None:intergenic |
| GGTTATCGGGTCGGAGTTTG+CGG | 0.448831 | 8.2:-18707518 | MS.gene60313:CDS |
| CATTTCAATCCAAGGTTGAA+AGG | 0.451774 | 8.2:-18707340 | MS.gene60313:CDS |
| AAAGCTGATTCGATTCTCTC+TGG | 0.453769 | 8.2:-18707703 | MS.gene60313:CDS |
| AAGGAAGGTTCCAGATTCAA+TGG | 0.456683 | 8.2:-18704893 | MS.gene60313:CDS |
| GGTTGGGAAACCGTTGAGTT+CGG | 0.457799 | 8.2:-18707437 | MS.gene60313:CDS |
| GACGTTAGGGTCGCATATAA+CGG | 0.460702 | 8.2:-18707461 | MS.gene60313:CDS |
| ATCCAAGGTTGAAAGGGGAT+TGG | 0.464715 | 8.2:-18707333 | MS.gene60313:CDS |
| CGAAATGGTTTCCAGCTGAT+AGG | 0.465640 | 8.2:+18705390 | None:intergenic |
| GTGAAGTGTGAGAAGTGGAT+TGG | 0.470984 | 8.2:-18705876 | MS.gene60313:CDS |
| TATTGTTATAGTGCCTTACA+TGG | 0.471405 | 8.2:-18705140 | MS.gene60313:CDS |
| AACAATTCGACACCAAAGTT+AGG | 0.473926 | 8.2:+18705422 | None:intergenic |
| CCACCATATGCTAATGGACC+GGG | 0.482311 | 8.2:-18704433 | MS.gene60313:CDS |
| ATTTCAATCCAAGGTTGAAA+GGG | 0.482323 | 8.2:-18707339 | MS.gene60313:CDS |
| TATCAATTATCGGTCAAAGA+TGG | 0.490425 | 8.2:-18707643 | MS.gene60313:CDS |
| TTTACTCTTGAGGATGCTAC+TGG | 0.491271 | 8.2:-18705569 | MS.gene60313:CDS |
| CACCACAAACCTTTGCGCTA+TGG | 0.494561 | 8.2:-18704844 | MS.gene60313:CDS |
| ACTGTTAGTGCTGGATTGGA+GGG | 0.495887 | 8.2:-18705729 | MS.gene60313:CDS |
| CAAAGGCACATCATCTGCCT+TGG | 0.496875 | 8.2:+18704090 | None:intergenic |
| AATTAATGCAGAGTTGAAGA+AGG | 0.502321 | 8.2:-18705182 | MS.gene60313:CDS |
| GGTCGGAGTTTGCGGCGAAT+GGG | 0.506308 | 8.2:-18707510 | MS.gene60313:CDS |
| TTTCGGAGCGGTTTGAATTG+GGG | 0.506438 | 8.2:+18707579 | None:intergenic |
| TTCATCGGCATCCTATCAGC+TGG | 0.509286 | 8.2:-18705401 | MS.gene60313:CDS |
| CTTCTTTGAGATGTGATGGT+TGG | 0.510984 | 8.2:-18707258 | MS.gene60313:CDS |
| GGAGTTGCAGGGTTTGAAAA+CGG | 0.511284 | 8.2:-18707392 | MS.gene60313:CDS |
| AGGTCGTACTTATCCATGTA+AGG | 0.513016 | 8.2:+18705127 | None:intergenic |
| ATCGGTTTCGGTTATCGGGT+CGG | 0.513715 | 8.2:-18707527 | MS.gene60313:CDS |
| CCGAAACCCGAGAAACGACC+CGG | 0.513820 | 8.2:-18707562 | MS.gene60313:CDS |
| GATGATTATGAGAATTTGAA+AGG | 0.514415 | 8.2:+18707852 | None:intergenic |
| TGCGGCGAATGGGAGTTTGA+TGG | 0.514844 | 8.2:-18707500 | MS.gene60313:CDS |
| ATGCTGTTATAGACGAAGTA+AGG | 0.515605 | 8.2:-18704912 | MS.gene60313:CDS |
| GCTACTGGACTCACTGTACA+TGG | 0.516052 | 8.2:-18705554 | MS.gene60313:CDS |
| TTGTTCTCATTAAATGGGAA+TGG | 0.517600 | 8.2:+18705765 | None:intergenic |
| TACCCCGGTCCATTAGCATA+TGG | 0.518101 | 8.2:+18704430 | None:intergenic |
| GATGTGATGGTTGGAAATCT+CGG | 0.522915 | 8.2:-18707249 | MS.gene60313:CDS |
| GGTACTTCTTTGAGATGTGA+TGG | 0.523543 | 8.2:-18707262 | MS.gene60313:CDS |
| TCATTACTCACAGTGCGATA+AGG | 0.524860 | 8.2:+18705666 | None:intergenic |
| GGTCGCATATAACGGTGGTT+GGG | 0.525176 | 8.2:-18707453 | MS.gene60313:CDS |
| GAAATATTAGGATGTGTTGA+AGG | 0.525213 | 8.2:+18705494 | None:intergenic |
| GGGTCGCATATAACGGTGGT+TGG | 0.529564 | 8.2:-18707454 | MS.gene60313:CDS |
| GGAGCAGGGCTTTACTCTTG+AGG | 0.531178 | 8.2:-18705579 | MS.gene60313:intron |
| GGATCGTTGTTTACAAAGAG+AGG | 0.532450 | 8.2:+18707873 | None:intergenic |
| AGGAGGCAGCAAATATAGAA+TGG | 0.533959 | 8.2:+18705519 | None:intergenic |
| CAGGGTTTGAAAACGGTGGA+AGG | 0.540423 | 8.2:-18707385 | MS.gene60313:CDS |
| GCCCCACCACTACCTAACTT+TGG | 0.541625 | 8.2:-18705434 | MS.gene60313:CDS |
| GGATTGAAATGCAAAATCCT+TGG | 0.542726 | 8.2:+18707352 | None:intergenic |
| GGGAAACCGTTGAGTTCGGA+AGG | 0.544210 | 8.2:-18707433 | MS.gene60313:CDS |
| TATCTCATGTTGCAGCATTG+AGG | 0.545162 | 8.2:+18704042 | None:intergenic |
| ATTAGGATGTGTTGAAGGCA+AGG | 0.547117 | 8.2:+18705499 | None:intergenic |
| TCCACCATATGCTAATGGAC+CGG | 0.548296 | 8.2:-18704434 | MS.gene60313:CDS |
| AAACCATTTCGCTGAGCGGA+TGG | 0.548725 | 8.2:-18705378 | MS.gene60313:CDS |
| GGTTGAAAGGGGATTGGAGT+GGG | 0.549692 | 8.2:-18707327 | MS.gene60313:CDS |
| TTTGGTGTCGAATTGTTCAT+CGG | 0.555807 | 8.2:-18705416 | MS.gene60313:CDS |
| AGGAAGGTTCCAGATTCAAT+GGG | 0.558346 | 8.2:-18704892 | MS.gene60313:CDS |
| TCCGCTGCAATTTATCCCAA+AGG | 0.559578 | 8.2:+18704073 | None:intergenic |
| ATGTGATGGTTGGAAATCTC+GGG | 0.560828 | 8.2:-18707248 | MS.gene60313:CDS |
| TTCTTGCTATAGGATGCAGT+GGG | 0.562531 | 8.2:-18707284 | MS.gene60313:CDS |
| CACCAAAGTTAGGTAGTGGT+GGG | 0.562634 | 8.2:+18705432 | None:intergenic |
| GGCAGGTGAAGTGTGAGAAG+TGG | 0.571744 | 8.2:-18705881 | MS.gene60313:CDS |
| AACCGATCGAGGACATGACC+CGG | 0.573142 | 8.2:+18707543 | None:intergenic |
| GTTTGAAACAGTTGATGGGC+AGG | 0.575587 | 8.2:-18705898 | MS.gene60313:intron |
| ACCCGGGTCATGTCCTCGAT+CGG | 0.577534 | 8.2:-18707545 | MS.gene60313:CDS |
| AAAATGGAAGATGTGAGTAT+GGG | 0.579322 | 8.2:-18704222 | MS.gene60313:CDS |
| AAGATGTGAGTATGGGAATG+TGG | 0.582220 | 8.2:-18704215 | MS.gene60313:CDS |
| GAAGTGTGAGAAGTGGATTG+GGG | 0.583197 | 8.2:-18705874 | MS.gene60313:CDS |
| AGATGTGAGTATGGGAATGT+GGG | 0.583910 | 8.2:-18704214 | MS.gene60313:CDS |
| TCGACACCAAAGTTAGGTAG+TGG | 0.587215 | 8.2:+18705428 | None:intergenic |
| TGATGACACATTTGTTAGAG+TGG | 0.588128 | 8.2:-18704935 | MS.gene60313:CDS |
| CCACCGTACCTCGTTCTGAA+AGG | 0.588871 | 8.2:-18707774 | MS.gene60313:CDS |
| ACACCAAAGTTAGGTAGTGG+TGG | 0.589737 | 8.2:+18705431 | None:intergenic |
| TGGTGGTTGAATAGATTCGT+AGG | 0.590566 | 8.2:-18705816 | MS.gene60313:CDS |
| ATTCTTGCTATAGGATGCAG+TGG | 0.592709 | 8.2:-18707285 | MS.gene60313:CDS |
| GTTTGATGGTGATTCCATGT+GGG | 0.594871 | 8.2:-18707486 | MS.gene60313:CDS |
| TTTCAATCCAAGGTTGAAAG+GGG | 0.600721 | 8.2:-18707338 | MS.gene60313:CDS |
| CCCGGTCCATTAGCATATGG+TGG | 0.600858 | 8.2:+18704433 | None:intergenic |
| TATCAAATCTTCAGAAGTGG+TGG | 0.605393 | 8.2:-18705324 | MS.gene60313:CDS |
| GCCCATTTACCATAGCGCAA+AGG | 0.605559 | 8.2:+18704835 | None:intergenic |
| TGAAATGCAAAATCCTTGGT+GGG | 0.609975 | 8.2:+18707356 | None:intergenic |
| AGTGGCTATATGTGAATATG+GGG | 0.610270 | 8.2:-18705089 | MS.gene60313:intron |
| TTGAAATGCAAAATCCTTGG+TGG | 0.614352 | 8.2:+18707355 | None:intergenic |
| GACCCTAACGTCAACCCACA+TGG | 0.619717 | 8.2:+18707472 | None:intergenic |
| TCTGCGGCGTACATCATGAA+AGG | 0.623296 | 8.2:-18704961 | MS.gene60313:CDS |
| TTGTGTTTGAAACAGTTGAT+GGG | 0.623496 | 8.2:-18705902 | MS.gene60313:intron |
| TGTTATAGACGAAGTAAGGA+AGG | 0.624304 | 8.2:-18704908 | MS.gene60313:CDS |
| TCTTATCAAATCTTCAGAAG+TGG | 0.625517 | 8.2:-18705327 | MS.gene60313:CDS |
| GGTTGAATAGATTCGTAGGT+CGG | 0.628907 | 8.2:-18705812 | MS.gene60313:CDS |
| AGGAGTTTGTATCAAAATGG+TGG | 0.631044 | 8.2:-18705833 | MS.gene60313:CDS |
| CCTTTCAGAACGAGGTACGG+TGG | 0.636507 | 8.2:+18707774 | None:intergenic |
| AGTTTGATGGTGATTCCATG+TGG | 0.637507 | 8.2:-18707487 | MS.gene60313:CDS |
| ATACTCTTTGGAATCGAATG+CGG | 0.638680 | 8.2:+18707663 | None:intergenic |
| GTGCCTTTCAGAACGAGGTA+CGG | 0.643332 | 8.2:+18707771 | None:intergenic |
| CAGCTCATTACCAATCTCCA+AGG | 0.644488 | 8.2:-18704107 | MS.gene60313:CDS |
| GGGAGATGATAGGCAAGCAG+AGG | 0.645689 | 8.2:-18705853 | MS.gene60313:CDS |
| CTGGAAACCATTTCGCTGAG+CGG | 0.649419 | 8.2:-18705382 | MS.gene60313:CDS |
| GTAGGTTAATAGAGTATCTG+CGG | 0.650192 | 8.2:-18704977 | MS.gene60313:intron |
| AGAACGTGCCTTTCAGAACG+AGG | 0.650228 | 8.2:+18707766 | None:intergenic |
| GAAAATTCAAGATGCTGCTG+TGG | 0.653389 | 8.2:+18705470 | None:intergenic |
| GCCTTTGGGATAAATTGCAG+CGG | 0.654028 | 8.2:-18704074 | MS.gene60313:CDS |
| ACCAAAGTTAGGTAGTGGTG+GGG | 0.656151 | 8.2:+18705433 | None:intergenic |
| ACCGATCGAGGACATGACCC+GGG | 0.657365 | 8.2:+18707544 | None:intergenic |
| AGGTTGAAAGGGGATTGGAG+TGG | 0.659965 | 8.2:-18707328 | MS.gene60313:CDS |
| TCGTTTCTCGGGTTTCGGAG+CGG | 0.661719 | 8.2:+18707567 | None:intergenic |
| GTTGCAGGGTTTGAAAACGG+TGG | 0.662672 | 8.2:-18707389 | MS.gene60313:CDS |
| TAATGTTGATGGGAGGCATG+TGG | 0.664346 | 8.2:-18705697 | MS.gene60313:CDS |
| AAGTGTGAGAAGTGGATTGG+GGG | 0.670079 | 8.2:-18705873 | MS.gene60313:CDS |
| GGATGGCTGTGAGAAAGTCA+TGG | 0.678801 | 8.2:-18705361 | MS.gene60313:CDS |
| TGGAAGGTGAAGACCCACCA+AGG | 0.679710 | 8.2:-18707369 | MS.gene60313:CDS |
| CGAAACCCGAGAAACGACCC+GGG | 0.681038 | 8.2:-18707561 | MS.gene60313:CDS |
| GGAAACCGTTGAGTTCGGAA+GGG | 0.685038 | 8.2:-18707432 | MS.gene60313:CDS |
| CCGATAACCGAAACCGATCG+AGG | 0.698060 | 8.2:+18707532 | None:intergenic |
| CACCATATGCTAATGGACCG+GGG | 0.698743 | 8.2:-18704432 | MS.gene60313:CDS |
| AGGATGTGTTGAAGGCAAGG+AGG | 0.709548 | 8.2:+18705502 | None:intergenic |
| GAGAGCGAGAACAACAACAA+AGG | 0.713379 | 8.2:-18707911 | MS.gene60313:CDS |
| TCATAAGACAGAATATACCC+CGG | 0.731870 | 8.2:+18704415 | None:intergenic |
| CCTTGTTGTGTTGAAAACAG+TGG | 0.740634 | 8.2:-18705107 | MS.gene60313:CDS |
| GTTAGGGTCGCATATAACGG+TGG | 0.757697 | 8.2:-18707458 | MS.gene60313:CDS |
| TAAATGGGCTGTGACATACG+AGG | 0.770509 | 8.2:-18704821 | MS.gene60313:intron |
| TCTTGCTATAGGATGCAGTG+GGG | 0.787501 | 8.2:-18707283 | MS.gene60313:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAATAAATTTCAAG+AGG | - | chr8.2:18706923-18706942 | MS.gene60313:intron | 10.0% |
| !!! | AGATTATATATTATATTTTG+TGG | - | chr8.2:18705839-18705858 | MS.gene60313:CDS | 10.0% |
| !!! | AAAGTATAGATTTTGATTTT+AGG | - | chr8.2:18704794-18704813 | MS.gene60313:intron | 15.0% |
| !!! | TTGAGAATATTGATTTTTAT+TGG | - | chr8.2:18707463-18707482 | MS.gene60313:CDS | 15.0% |
| !! | AATAAAGCATGAAATCAAAA+GGG | + | chr8.2:18706701-18706720 | None:intergenic | 20.0% |
| !! | ACAAAAGCAAAATTAAGAAA+TGG | + | chr8.2:18706354-18706373 | None:intergenic | 20.0% |
| !! | TAATAAAGCATGAAATCAAA+AGG | + | chr8.2:18706702-18706721 | None:intergenic | 20.0% |
| !! | TTATTTGCAGTTGTTTAAAA+TGG | - | chr8.2:18707719-18707738 | MS.gene60313:CDS | 20.0% |
| !!! | AATTTGAGAAGCATAAATTA+AGG | - | chr8.2:18707588-18707607 | MS.gene60313:CDS | 20.0% |
| !!! | ATGCTTTATTATTTTCTTAC+GGG | - | chr8.2:18706711-18706730 | MS.gene60313:intron | 20.0% |
| !!! | ATTGGAAATTTTACATAAGT+CGG | - | chr8.2:18704900-18704919 | MS.gene60313:CDS | 20.0% |
| !!! | ATTTGAGAAGCATAAATTAA+GGG | - | chr8.2:18707589-18707608 | MS.gene60313:CDS | 20.0% |
| !!! | CATGCTTTATTATTTTCTTA+CGG | - | chr8.2:18706710-18706729 | MS.gene60313:intron | 20.0% |
| !!! | CTTAATTTTGCTTTTGTAAT+TGG | - | chr8.2:18706357-18706376 | MS.gene60313:intron | 20.0% |
| !!! | GTAATTTGTAACATTGTTTA+TGG | - | chr8.2:18704995-18705014 | MS.gene60313:intron | 20.0% |
| !!! | TATATTTTGTGGATAAAAAG+TGG | - | chr8.2:18705850-18705869 | MS.gene60313:CDS | 20.0% |
| !!! | TCTGCATTAATTTCTATTTT+CGG | + | chr8.2:18706767-18706786 | None:intergenic | 20.0% |
| ! | AAGACATAGAACAACTATTA+AGG | - | chr8.2:18704940-18704959 | MS.gene60313:CDS | 25.0% |
| ! | AATGGTACAAATCAAAATTC+TGG | + | chr8.2:18706336-18706355 | None:intergenic | 25.0% |
| ! | CAAGTTCAATATAAAACTAC+CGG | + | chr8.2:18705570-18705589 | None:intergenic | 25.0% |
| ! | GATGATTATGAGAATTTGAA+AGG | + | chr8.2:18704108-18704127 | None:intergenic | 25.0% |
| ! | GTTAATGTCAGTTATTATGT+GGG | - | chr8.2:18705354-18705373 | MS.gene60313:CDS | 25.0% |
| ! | TCAAAGATTCAAAGATAAAC+TGG | + | chr8.2:18705986-18706005 | None:intergenic | 25.0% |
| ! | TGTTAATGTCAGTTATTATG+TGG | - | chr8.2:18705353-18705372 | MS.gene60313:CDS | 25.0% |
| ! | TTAAACAACTGCAAATAAGA+GGG | + | chr8.2:18707717-18707736 | None:intergenic | 25.0% |
| ! | TTATAACCAGCAATAAGTAA+TGG | + | chr8.2:18707434-18707453 | None:intergenic | 25.0% |
| ! | TTCAATACTTCAAATTCATG+CGG | - | chr8.2:18705452-18705471 | MS.gene60313:CDS | 25.0% |
| ! | TTGTTTATGGTAGAACATTA+TGG | - | chr8.2:18705008-18705027 | MS.gene60313:intron | 25.0% |
| ! | TTTAAACAACTGCAAATAAG+AGG | + | chr8.2:18707718-18707737 | None:intergenic | 25.0% |
| !! | CTGCATTAATTTCTATTTTC+GGG | + | chr8.2:18706766-18706785 | None:intergenic | 25.0% |
| !! | TTGTTCATTTAGAGTTACTT+TGG | - | chr8.2:18705250-18705269 | MS.gene60313:intron | 25.0% |
| !!! | AAGTTTCTAGTTGTAGATTT+GGG | - | chr8.2:18705710-18705729 | MS.gene60313:CDS | 25.0% |
| !!! | AATAGCTTGTTCTCATTAAA+TGG | + | chr8.2:18706201-18706220 | None:intergenic | 25.0% |
| !!! | AGGGAAAAATCACTTTTTTT+TGG | - | chr8.2:18704544-18704563 | MS.gene60313:intron | 25.0% |
| !!! | ATAGCTTGTTCTCATTAAAT+GGG | + | chr8.2:18706200-18706219 | None:intergenic | 25.0% |
| !!! | CAATCAACTGTTACTTTTTT+CGG | + | chr8.2:18706171-18706190 | None:intergenic | 25.0% |
| !!! | GCTATCATTTTAATGTTGAT+GGG | - | chr8.2:18706250-18706269 | MS.gene60313:intron | 25.0% |
| !!! | TGCTTTATTATTTTCTTACG+GGG | - | chr8.2:18706712-18706731 | MS.gene60313:intron | 25.0% |
| !!! | TGGTTTTGTTGAAAACAAAA+GGG | + | chr8.2:18704166-18704185 | None:intergenic | 25.0% |
| !!! | TTCCAAAGAGTATCAATTAT+CGG | - | chr8.2:18704304-18704323 | MS.gene60313:intron | 25.0% |
| !!! | TTTAAGTTGAATATGCATGT+TGG | - | chr8.2:18704826-18704845 | MS.gene60313:CDS | 25.0% |
| !!! | TTTTTTTCGTTGTTAAAGAG+CGG | - | chr8.2:18707180-18707199 | MS.gene60313:intron | 25.0% |
| AAAATGGAAGATGTGAGTAT+GGG | - | chr8.2:18707735-18707754 | MS.gene60313:CDS | 30.0% | |
| AACGAAAAAAACATTGCATC+AGG | + | chr8.2:18707171-18707190 | None:intergenic | 30.0% | |
| AATTAATGCAGAGTTGAAGA+AGG | - | chr8.2:18706775-18706794 | MS.gene60313:intron | 30.0% | |
| AGATTTAGAGATCAATGAGT+TGG | - | chr8.2:18704964-18704983 | MS.gene60313:CDS | 30.0% | |
| ATGATTCTACTGTTACTATG+TGG | - | chr8.2:18705915-18705934 | MS.gene60313:intron | 30.0% | |
| ATTCAATGGGTGCTTATATT+GGG | - | chr8.2:18707078-18707097 | MS.gene60313:intron | 30.0% | |
| ATTTCAATCCAAGGTTGAAA+GGG | - | chr8.2:18704618-18704637 | MS.gene60313:intron | 30.0% | |
| CAAGAATTAAGCTCAATAAC+AGG | + | chr8.2:18704659-18704678 | None:intergenic | 30.0% | |
| CGAAAAAAGTAACAGTTGAT+TGG | - | chr8.2:18706169-18706188 | MS.gene60313:intron | 30.0% | |
| CTTGCTTTGTAAAATTGACT+TGG | + | chr8.2:18705163-18705182 | None:intergenic | 30.0% | |
| GAAATATTAGGATGTGTTGA+AGG | + | chr8.2:18706466-18706485 | None:intergenic | 30.0% | |
| GAGAAAAACTTAAATACAGC+TGG | + | chr8.2:18707412-18707431 | None:intergenic | 30.0% | |
| TAAAATGGAAGATGTGAGTA+TGG | - | chr8.2:18707734-18707753 | MS.gene60313:CDS | 30.0% | |
| TAAACAACTGCAAATAAGAG+GGG | + | chr8.2:18707716-18707735 | None:intergenic | 30.0% | |
| TAAATTTCAAGAGGAATCAG+AGG | - | chr8.2:18706932-18706951 | MS.gene60313:intron | 30.0% | |
| TATCAATTATCGGTCAAAGA+TGG | - | chr8.2:18704314-18704333 | MS.gene60313:intron | 30.0% | |
| TATTGTTATAGTGCCTTACA+TGG | - | chr8.2:18706817-18706836 | MS.gene60313:intron | 30.0% | |
| TCTTATCAAATCTTCAGAAG+TGG | - | chr8.2:18706630-18706649 | MS.gene60313:intron | 30.0% | |
| TGATTCTACTGTTACTATGT+GGG | - | chr8.2:18705916-18705935 | MS.gene60313:intron | 30.0% | |
| TTGTTCTCATTAAATGGGAA+TGG | + | chr8.2:18706195-18706214 | None:intergenic | 30.0% | |
| ! | AACTAAGTTGACTGTGTAAA+GGG | - | chr8.2:18705640-18705659 | MS.gene60313:intron | 30.0% |
| ! | ATCTTGAATTTTCAACCAGA+TGG | - | chr8.2:18706497-18706516 | MS.gene60313:intron | 30.0% |
| ! | TGATGGTAATGTATACATGT+TGG | - | chr8.2:18705486-18705505 | MS.gene60313:CDS | 30.0% |
| ! | TTGAGCTTAATTCTTGCTAT+AGG | - | chr8.2:18704663-18704682 | MS.gene60313:intron | 30.0% |
| ! | TTGTGTTTGAAACAGTTGAT+GGG | - | chr8.2:18706055-18706074 | MS.gene60313:intron | 30.0% |
| ! | TTTTCTCCATTACTTATTGC+TGG | - | chr8.2:18707425-18707444 | MS.gene60313:CDS | 30.0% |
| !! | AGTTTCTAGTTGTAGATTTG+GGG | - | chr8.2:18705711-18705730 | MS.gene60313:CDS | 30.0% |
| !! | ATCATTTTAATGTTGATGGG+AGG | - | chr8.2:18706253-18706272 | MS.gene60313:intron | 30.0% |
| !! | GAAGTTTCTAGTTGTAGATT+TGG | - | chr8.2:18705709-18705728 | MS.gene60313:CDS | 30.0% |
| !! | GGCTATCATTTTAATGTTGA+TGG | - | chr8.2:18706249-18706268 | MS.gene60313:intron | 30.0% |
| !!! | AAGAAGGAAGCAGAATTTTT+TGG | - | chr8.2:18706791-18706810 | MS.gene60313:intron | 30.0% |
| !!! | GTGGTTTTGTTGAAAACAAA+AGG | + | chr8.2:18704167-18704186 | None:intergenic | 30.0% |
| !!! | TTTTGATCTGTTTCTAACCA+TGG | + | chr8.2:18705766-18705785 | None:intergenic | 30.0% |
| !!! | TTTTTTCGTTGTTAAAGAGC+GGG | - | chr8.2:18707181-18707200 | MS.gene60313:intron | 30.0% |
| AAACTTAGATGCAGTGTTGT+AGG | - | chr8.2:18707264-18707283 | MS.gene60313:CDS | 35.0% | |
| AACAATTCGACACCAAAGTT+AGG | + | chr8.2:18706538-18706557 | None:intergenic | 35.0% | |
| ACAGTCAACTTAGTTGTAAC+TGG | + | chr8.2:18705635-18705654 | None:intergenic | 35.0% | |
| ACAGTGGCTATATGTGAATA+TGG | - | chr8.2:18706866-18706885 | MS.gene60313:intron | 35.0% | |
| ACTGTTACTATGTGGGAATA+TGG | - | chr8.2:18705923-18705942 | MS.gene60313:intron | 35.0% | |
| AGATGTGCTACATTGTTTGT+AGG | - | chr8.2:18706962-18706981 | MS.gene60313:intron | 35.0% | |
| AGGAGTTTGTATCAAAATGG+TGG | - | chr8.2:18706124-18706143 | MS.gene60313:intron | 35.0% | |
| AGTGGCTATATGTGAATATG+GGG | - | chr8.2:18706868-18706887 | MS.gene60313:intron | 35.0% | |
| ATATAAGCACCCATTGAATC+TGG | + | chr8.2:18707077-18707096 | None:intergenic | 35.0% | |
| ATGCTGTTATAGACGAAGTA+AGG | - | chr8.2:18707045-18707064 | MS.gene60313:intron | 35.0% | |
| CAAGCAACAACTCAATTTAG+AGG | + | chr8.2:18706038-18706057 | None:intergenic | 35.0% | |
| CAGAGGAGTTTGTATCAAAA+TGG | - | chr8.2:18706121-18706140 | MS.gene60313:intron | 35.0% | |
| CAGTCAACTTAGTTGTAACT+GGG | + | chr8.2:18705634-18705653 | None:intergenic | 35.0% | |
| CAGTGGCTATATGTGAATAT+GGG | - | chr8.2:18706867-18706886 | MS.gene60313:intron | 35.0% | |
| CATTTCAATCCAAGGTTGAA+AGG | - | chr8.2:18704617-18704636 | MS.gene60313:intron | 35.0% | |
| GACCGATAATTGATACTCTT+TGG | + | chr8.2:18704309-18704328 | None:intergenic | 35.0% | |
| GATTATCCACCATATGCTAA+TGG | - | chr8.2:18707518-18707537 | MS.gene60313:CDS | 35.0% | |
| GATTCAATGGGTGCTTATAT+TGG | - | chr8.2:18707077-18707096 | MS.gene60313:intron | 35.0% | |
| GGATTGAAATGCAAAATCCT+TGG | + | chr8.2:18704608-18704627 | None:intergenic | 35.0% | |
| TATCAAATCTTCAGAAGTGG+TGG | - | chr8.2:18706633-18706652 | MS.gene60313:intron | 35.0% | |
| TATGAAATTGTGCCATAGTC+CGG | - | chr8.2:18705402-18705421 | MS.gene60313:CDS | 35.0% | |
| TCATAAGACAGAATATACCC+CGG | + | chr8.2:18707545-18707564 | None:intergenic | 35.0% | |
| TGAAATGCAAAATCCTTGGT+GGG | + | chr8.2:18704604-18704623 | None:intergenic | 35.0% | |
| TGACTTGAAGTGATTTGAGT+TGG | - | chr8.2:18704877-18704896 | MS.gene60313:CDS | 35.0% | |
| TGCATACATCAAAGATGAAC+CGG | + | chr8.2:18705424-18705443 | None:intergenic | 35.0% | |
| TGTTATAGACGAAGTAAGGA+AGG | - | chr8.2:18707049-18707068 | MS.gene60313:intron | 35.0% | |
| TTCAAAGATAAACTGGACCA+TGG | + | chr8.2:18705979-18705998 | None:intergenic | 35.0% | |
| TTGAAATGCAAAATCCTTGG+TGG | + | chr8.2:18704605-18704624 | None:intergenic | 35.0% | |
| TTTCAATCCAAGGTTGAAAG+GGG | - | chr8.2:18704619-18704638 | MS.gene60313:intron | 35.0% | |
| TTTGTCAAATGTTGACGAAG+TGG | - | chr8.2:18705816-18705835 | MS.gene60313:CDS | 35.0% | |
| TTTGTTCTTACTGTTAGTGC+TGG | - | chr8.2:18706219-18706238 | MS.gene60313:intron | 35.0% | |
| ! | CAACTAAGTTGACTGTGTAA+AGG | - | chr8.2:18705639-18705658 | MS.gene60313:intron | 35.0% |
| ! | CTTGTGTTTGAAACAGTTGA+TGG | - | chr8.2:18706054-18706073 | MS.gene60313:intron | 35.0% |
| ! | GACTGACCTTTAAAAACACA+TGG | + | chr8.2:18705741-18705760 | None:intergenic | 35.0% |
| ! | GGATTTTGCATTTCAATCCA+AGG | - | chr8.2:18704609-18704628 | MS.gene60313:intron | 35.0% |
| ! | GTAGGTTAATAGAGTATCTG+CGG | - | chr8.2:18706980-18706999 | MS.gene60313:intron | 35.0% |
| ! | TGAATATGCATGTTGGTTAG+TGG | - | chr8.2:18704833-18704852 | MS.gene60313:CDS | 35.0% |
| ! | TGATGACACATTTGTTAGAG+TGG | - | chr8.2:18707022-18707041 | MS.gene60313:intron | 35.0% |
| ! | TGTTATTTGATCAAGTCTCC+AGG | - | chr8.2:18707650-18707669 | MS.gene60313:CDS | 35.0% |
| ! | TTTGATGATCCTCTCACAAA+GGG | + | chr8.2:18707377-18707396 | None:intergenic | 35.0% |
| !! | ATACTCTTTGGAATCGAATG+CGG | + | chr8.2:18704297-18704316 | None:intergenic | 35.0% |
| !! | GGTTCACCATGTGTTTTTAA+AGG | - | chr8.2:18705732-18705751 | MS.gene60313:CDS | 35.0% |
| !! | TGAAGTGATTTGAGTTGGAT+TGG | - | chr8.2:18704882-18704901 | MS.gene60313:CDS | 35.0% |
| !! | TTGCTTTTGTAATTGGAGCA+GGG | - | chr8.2:18706364-18706383 | MS.gene60313:intron | 35.0% |
| !! | TTTGCTTTTGTAATTGGAGC+AGG | - | chr8.2:18706363-18706382 | MS.gene60313:intron | 35.0% |
| !! | TTTGGTGTCGAATTGTTCAT+CGG | - | chr8.2:18706541-18706560 | MS.gene60313:intron | 35.0% |
| !! | TTTTGATGATCCTCTCACAA+AGG | + | chr8.2:18707378-18707397 | None:intergenic | 35.0% |
| !!! | ATTGGTTGCCTTTTGTTTTC+AGG | - | chr8.2:18707481-18707500 | MS.gene60313:CDS | 35.0% |
| !!! | CACTTTTTTTTGGAGTTGCA+GGG | - | chr8.2:18704554-18704573 | MS.gene60313:intron | 35.0% |
| !!! | GCATCTAAGTTTTGTTCTCA+AGG | + | chr8.2:18707256-18707275 | None:intergenic | 35.0% |
| !!! | TCACTTTTTTTTGGAGTTGC+AGG | - | chr8.2:18704553-18704572 | MS.gene60313:intron | 35.0% |
| AACCTTCTATACAGCCAAAC+TGG | + | chr8.2:18707824-18707843 | None:intergenic | 40.0% | |
| AACCTTTGCGCTATGGTAAA+TGG | - | chr8.2:18707120-18707139 | MS.gene60313:intron | 40.0% | |
| AAGATGTGAGTATGGGAATG+TGG | - | chr8.2:18707742-18707761 | MS.gene60313:CDS | 40.0% | |
| AAGGAAGGTTCCAGATTCAA+TGG | - | chr8.2:18707064-18707083 | MS.gene60313:intron | 40.0% | |
| ACCTTTGCGCTATGGTAAAT+GGG | - | chr8.2:18707121-18707140 | MS.gene60313:intron | 40.0% | |
| ACTACCGGAAAACTTTCAAG+CGG | + | chr8.2:18705555-18705574 | None:intergenic | 40.0% | |
| AGATGTGAGTATGGGAATGT+GGG | - | chr8.2:18707743-18707762 | MS.gene60313:CDS | 40.0% | |
| AGCTTAAGATTCTGCCAGTT+TGG | - | chr8.2:18707807-18707826 | MS.gene60313:CDS | 40.0% | |
| AGGAAGGTTCCAGATTCAAT+GGG | - | chr8.2:18707065-18707084 | MS.gene60313:intron | 40.0% | |
| AGGAGGCAGCAAATATAGAA+TGG | + | chr8.2:18706441-18706460 | None:intergenic | 40.0% | |
| AGGTCGTACTTATCCATGTA+AGG | + | chr8.2:18706833-18706852 | None:intergenic | 40.0% | |
| AGTCGGATTACTAGAGACAT+AGG | - | chr8.2:18704917-18704936 | MS.gene60313:CDS | 40.0% | |
| ATCAAAGATGAACCGGACTA+TGG | + | chr8.2:18705417-18705436 | None:intergenic | 40.0% | |
| ATGCGGAATGAATAGAGTGA+TGG | - | chr8.2:18705469-18705488 | MS.gene60313:CDS | 40.0% | |
| ATGTGATGGTTGGAAATCTC+GGG | - | chr8.2:18704709-18704728 | MS.gene60313:intron | 40.0% | |
| ATTAGGATGTGTTGAAGGCA+AGG | + | chr8.2:18706461-18706480 | None:intergenic | 40.0% | |
| CATGGCATAATTACACTACG+AGG | + | chr8.2:18705961-18705980 | None:intergenic | 40.0% | |
| CTCGTAGTGTAATTATGCCA+TGG | - | chr8.2:18705959-18705978 | MS.gene60313:intron | 40.0% | |
| GAAAATTCAAGATGCTGCTG+TGG | + | chr8.2:18706490-18706509 | None:intergenic | 40.0% | |
| GATGTGATGGTTGGAAATCT+CGG | - | chr8.2:18704708-18704727 | MS.gene60313:intron | 40.0% | |
| GGATCGTTGTTTACAAAGAG+AGG | + | chr8.2:18704087-18704106 | None:intergenic | 40.0% | |
| GGTTGAATAGATTCGTAGGT+CGG | - | chr8.2:18706145-18706164 | MS.gene60313:intron | 40.0% | |
| TATCTCATGTTGCAGCATTG+AGG | + | chr8.2:18707918-18707937 | None:intergenic | 40.0% | |
| TCAAAGATGGAAAACGCGTT+TGG | - | chr8.2:18704327-18704346 | MS.gene60313:intron | 40.0% | |
| TCATTACTCACAGTGCGATA+AGG | + | chr8.2:18706294-18706313 | None:intergenic | 40.0% | |
| TGCTGCTGTGGAGAAATATT+AGG | + | chr8.2:18706478-18706497 | None:intergenic | 40.0% | |
| TGGTGGTTGAATAGATTCGT+AGG | - | chr8.2:18706141-18706160 | MS.gene60313:intron | 40.0% | |
| TTTACTCTTGAGGATGCTAC+TGG | - | chr8.2:18706388-18706407 | MS.gene60313:intron | 40.0% | |
| ! | ATCACCGCTTGAAAGTTTTC+CGG | - | chr8.2:18705548-18705567 | MS.gene60313:CDS | 40.0% |
| ! | ATTCTTGCTATAGGATGCAG+TGG | - | chr8.2:18704672-18704691 | MS.gene60313:intron | 40.0% |
| ! | CCACTGTTTTCAACACAACA+AGG | + | chr8.2:18706853-18706872 | None:intergenic | 40.0% |
| ! | CCTTGTTGTGTTGAAAACAG+TGG | - | chr8.2:18706850-18706869 | MS.gene60313:intron | 40.0% |
| ! | TCAGCTTTGTGATGAGTACT+AGG | + | chr8.2:18704242-18704261 | None:intergenic | 40.0% |
| ! | TCTTACTGTTAGTGCTGGAT+TGG | - | chr8.2:18706224-18706243 | MS.gene60313:intron | 40.0% |
| ! | TGAAGTGTGAGAAGTGGATT+GGG | - | chr8.2:18706082-18706101 | MS.gene60313:intron | 40.0% |
| ! | TTCTTGCTATAGGATGCAGT+GGG | - | chr8.2:18704673-18704692 | MS.gene60313:intron | 40.0% |
| ! | TTGATGATCCTCTCACAAAG+GGG | + | chr8.2:18707376-18707395 | None:intergenic | 40.0% |
| ! | TTTTTCCCTTCCGAACTCAA+CGG | + | chr8.2:18704533-18704552 | None:intergenic | 40.0% |
| !! | AAAGCTGATTCGATTCTCTC+TGG | - | chr8.2:18704254-18704273 | MS.gene60313:intron | 40.0% |
| !! | AGTTTGATGGTGATTCCATG+TGG | - | chr8.2:18704470-18704489 | MS.gene60313:intron | 40.0% |
| !! | CTTCTTTGAGATGTGATGGT+TGG | - | chr8.2:18704699-18704718 | MS.gene60313:intron | 40.0% |
| !! | GGTACTTCTTTGAGATGTGA+TGG | - | chr8.2:18704695-18704714 | MS.gene60313:intron | 40.0% |
| !! | GTTTGATGGTGATTCCATGT+GGG | - | chr8.2:18704471-18704490 | MS.gene60313:intron | 40.0% |
| !! | TATGGTGGATAATCCTCTTC+AGG | + | chr8.2:18707512-18707531 | None:intergenic | 40.0% |
| !! | TTTTAAAGGTCAGTCGACCA+TGG | - | chr8.2:18705746-18705765 | MS.gene60313:CDS | 40.0% |
| !!! | TTGCCTTTTGTTTTCAGGAG+TGG | - | chr8.2:18707486-18707505 | MS.gene60313:CDS | 40.0% |
| AAAAACTGCCCCTTTGTGAG+AGG | - | chr8.2:18707365-18707384 | MS.gene60313:CDS | 45.0% | |
| AAACGTGAGAAGCTACAGCT+TGG | + | chr8.2:18705232-18705251 | None:intergenic | 45.0% | |
| AAGGCAGATGATGTGCCTTT+GGG | - | chr8.2:18707869-18707888 | MS.gene60313:CDS | 45.0% | |
| ACATCATCTGCCTTGGAGAT+TGG | + | chr8.2:18707863-18707882 | None:intergenic | 45.0% | |
| AGGCCACTCCTGAAAACAAA+AGG | + | chr8.2:18707492-18707511 | None:intergenic | 45.0% | |
| ATCCAAGGTTGAAAGGGGAT+TGG | - | chr8.2:18704624-18704643 | MS.gene60313:intron | 45.0% | |
| CAGCTCATTACCAATCTCCA+AGG | - | chr8.2:18707850-18707869 | MS.gene60313:CDS | 45.0% | |
| CGAAATGGTTTCCAGCTGAT+AGG | + | chr8.2:18706570-18706589 | None:intergenic | 45.0% | |
| CTTAGATGCAGTGTTGTAGG+TGG | - | chr8.2:18707267-18707286 | MS.gene60313:CDS | 45.0% | |
| GAAACTTCCCTACCAATGCA+CGG | + | chr8.2:18705697-18705716 | None:intergenic | 45.0% | |
| GACGTTAGGGTCGCATATAA+CGG | - | chr8.2:18704496-18704515 | MS.gene60313:intron | 45.0% | |
| GAGAGCGAGAACAACAACAA+AGG | - | chr8.2:18704046-18704065 | MS.gene60313:CDS | 45.0% | |
| GGAGTTGCAGGGTTTGAAAA+CGG | - | chr8.2:18704565-18704584 | MS.gene60313:intron | 45.0% | |
| GTGAAGTGTGAGAAGTGGAT+TGG | - | chr8.2:18706081-18706100 | MS.gene60313:intron | 45.0% | |
| GTTTCGGAGCGGTTTGAATT+GGG | + | chr8.2:18704382-18704401 | None:intergenic | 45.0% | |
| TACCATAGCGCAAAGGTTTG+TGG | + | chr8.2:18707118-18707137 | None:intergenic | 45.0% | |
| TCCGCTGCAATTTATCCCAA+AGG | + | chr8.2:18707887-18707906 | None:intergenic | 45.0% | |
| TCGACACCAAAGTTAGGTAG+TGG | + | chr8.2:18706532-18706551 | None:intergenic | 45.0% | |
| TGCCAGTTTGGCTGTATAGA+AGG | - | chr8.2:18707819-18707838 | MS.gene60313:CDS | 45.0% | |
| TTAAAGAGCGGGAGTTGTCT+TGG | - | chr8.2:18707192-18707211 | MS.gene60313:intron | 45.0% | |
| TTTCGGAGCGGTTTGAATTG+GGG | + | chr8.2:18704381-18704400 | None:intergenic | 45.0% | |
| ! | AAGTCTTATCCCACTAAGCG+GGG | + | chr8.2:18705057-18705076 | None:intergenic | 45.0% |
| ! | ACACCAAAGTTAGGTAGTGG+TGG | + | chr8.2:18706529-18706548 | None:intergenic | 45.0% |
| ! | ACCAAAGTTAGGTAGTGGTG+GGG | + | chr8.2:18706527-18706546 | None:intergenic | 45.0% |
| ! | ACTGTTAGTGCTGGATTGGA+GGG | - | chr8.2:18706228-18706247 | MS.gene60313:intron | 45.0% |
| ! | ATTCCATGTGGGTTGACGTT+AGG | - | chr8.2:18704482-18704501 | MS.gene60313:intron | 45.0% |
| ! | CAAGTCTTATCCCACTAAGC+GGG | + | chr8.2:18705058-18705077 | None:intergenic | 45.0% |
| ! | CACCAAAGTTAGGTAGTGGT+GGG | + | chr8.2:18706528-18706547 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCCCACTAAG+CGG | + | chr8.2:18705059-18705078 | None:intergenic | 45.0% |
| ! | TAATGTTGATGGGAGGCATG+TGG | - | chr8.2:18706260-18706279 | MS.gene60313:intron | 45.0% |
| ! | TACTGTTAGTGCTGGATTGG+AGG | - | chr8.2:18706227-18706246 | MS.gene60313:intron | 45.0% |
| ! | TCCACCATATGCTAATGGAC+CGG | - | chr8.2:18707523-18707542 | MS.gene60313:CDS | 45.0% |
| ! | TCTTGCTATAGGATGCAGTG+GGG | - | chr8.2:18704674-18704693 | MS.gene60313:intron | 45.0% |
| ! | TTCCATGTGGGTTGACGTTA+GGG | - | chr8.2:18704483-18704502 | MS.gene60313:intron | 45.0% |
| !! | AAGTGTGAGAAGTGGATTGG+GGG | - | chr8.2:18706084-18706103 | MS.gene60313:intron | 45.0% |
| !! | GAAGTGTGAGAAGTGGATTG+GGG | - | chr8.2:18706083-18706102 | MS.gene60313:intron | 45.0% |
| !! | GCCTTTGGGATAAATTGCAG+CGG | - | chr8.2:18707883-18707902 | MS.gene60313:CDS | 45.0% |
| !! | GTTTGAAACAGTTGATGGGC+AGG | - | chr8.2:18706059-18706078 | MS.gene60313:intron | 45.0% |
| !! | TAAATGGGCTGTGACATACG+AGG | - | chr8.2:18707136-18707155 | MS.gene60313:intron | 45.0% |
| AAACCATTTCGCTGAGCGGA+TGG | - | chr8.2:18706579-18706598 | MS.gene60313:intron | 50.0% | |
| AGAACGTGCCTTTCAGAACG+AGG | + | chr8.2:18704194-18704213 | None:intergenic | 50.0% | |
| AGGATGTGTTGAAGGCAAGG+AGG | + | chr8.2:18706458-18706477 | None:intergenic | 50.0% | |
| AGGTTGAAAGGGGATTGGAG+TGG | - | chr8.2:18704629-18704648 | MS.gene60313:intron | 50.0% | |
| CAAGGCAGATGATGTGCCTT+TGG | - | chr8.2:18707868-18707887 | MS.gene60313:CDS | 50.0% | |
| CACCACAAACCTTTGCGCTA+TGG | - | chr8.2:18707113-18707132 | MS.gene60313:intron | 50.0% | |
| CAGGGTTTGAAAACGGTGGA+AGG | - | chr8.2:18704572-18704591 | MS.gene60313:intron | 50.0% | |
| CCGCTTAGTGGGATAAGACT+TGG | - | chr8.2:18705056-18705075 | MS.gene60313:intron | 50.0% | |
| CTCCAATCCCCTTTCAACCT+TGG | + | chr8.2:18704629-18704648 | None:intergenic | 50.0% | |
| CTGGAAACCATTTCGCTGAG+CGG | - | chr8.2:18706575-18706594 | MS.gene60313:intron | 50.0% | |
| GCCCATTTACCATAGCGCAA+AGG | + | chr8.2:18707125-18707144 | None:intergenic | 50.0% | |
| GCTACTGGACTCACTGTACA+TGG | - | chr8.2:18706403-18706422 | MS.gene60313:intron | 50.0% | |
| GGAAACCGTTGAGTTCGGAA+GGG | - | chr8.2:18704525-18704544 | MS.gene60313:intron | 50.0% | |
| GGATGGCTGTGAGAAAGTCA+TGG | - | chr8.2:18706596-18706615 | MS.gene60313:intron | 50.0% | |
| GGCTCGTTTCTTTGTAGCAC+TGG | - | chr8.2:18706654-18706673 | MS.gene60313:intron | 50.0% | |
| GGTCGCATATAACGGTGGTT+GGG | - | chr8.2:18704504-18704523 | MS.gene60313:intron | 50.0% | |
| GGTTGAAAGGGGATTGGAGT+GGG | - | chr8.2:18704630-18704649 | MS.gene60313:intron | 50.0% | |
| GGTTGGGAAACCGTTGAGTT+CGG | - | chr8.2:18704520-18704539 | MS.gene60313:intron | 50.0% | |
| GGTTTCGGAGCGGTTTGAAT+TGG | + | chr8.2:18704383-18704402 | None:intergenic | 50.0% | |
| GTGCCTTTCAGAACGAGGTA+CGG | + | chr8.2:18704189-18704208 | None:intergenic | 50.0% | |
| GTTAGGGTCGCATATAACGG+TGG | - | chr8.2:18704499-18704518 | MS.gene60313:intron | 50.0% | |
| GTTGCAGGGTTTGAAAACGG+TGG | - | chr8.2:18704568-18704587 | MS.gene60313:intron | 50.0% | |
| TACCCCGGTCCATTAGCATA+TGG | + | chr8.2:18707530-18707549 | None:intergenic | 50.0% | |
| TCTCGGGCTGATCAAGATAC+TGG | - | chr8.2:18704725-18704744 | MS.gene60313:intron | 50.0% | |
| TCTGCGGCGTACATCATGAA+AGG | - | chr8.2:18706996-18707015 | MS.gene60313:intron | 50.0% | |
| TGAGTGTATGCACCGTGCAT+TGG | - | chr8.2:18705682-18705701 | MS.gene60313:CDS | 50.0% | |
| TTCATCGGCATCCTATCAGC+TGG | - | chr8.2:18706556-18706575 | MS.gene60313:intron | 50.0% | |
| ! | ATCGGTTTCGGTTATCGGGT+CGG | - | chr8.2:18704430-18704449 | MS.gene60313:CDS | 50.0% |
| ! | CAAAGGCACATCATCTGCCT+TGG | + | chr8.2:18707870-18707889 | None:intergenic | 50.0% |
| ! | CACCATATGCTAATGGACCG+GGG | - | chr8.2:18707525-18707544 | MS.gene60313:CDS | 50.0% |
| ! | CCACCATATGCTAATGGACC+GGG | - | chr8.2:18707524-18707543 | MS.gene60313:CDS | 50.0% |
| ! | CCTCGATCGGTTTCGGTTAT+CGG | - | chr8.2:18704425-18704444 | MS.gene60313:CDS | 50.0% |
| ! | CTCGATCGGTTTCGGTTATC+GGG | - | chr8.2:18704426-18704445 | MS.gene60313:CDS | 50.0% |
| ! | GTATGCACCGTGCATTGGTA+GGG | - | chr8.2:18705687-18705706 | MS.gene60313:CDS | 50.0% |
| ! | GTCATGTCCTCGATCGGTTT+CGG | - | chr8.2:18704418-18704437 | MS.gene60313:CDS | 50.0% |
| ! | TGTATGCACCGTGCATTGGT+AGG | - | chr8.2:18705686-18705705 | MS.gene60313:CDS | 50.0% |
| !! | AGTGGATTGGGGGAGATGAT+AGG | - | chr8.2:18706094-18706113 | MS.gene60313:intron | 50.0% |
| !! | TTTTCAGGAGTGGCCTGAAG+AGG | - | chr8.2:18707496-18707515 | MS.gene60313:CDS | 50.0% |
| AACCGATCGAGGACATGACC+CGG | + | chr8.2:18704417-18704436 | None:intergenic | 55.0% | |
| ACATGACCCGGGTCGTTTCT+CGG | + | chr8.2:18704405-18704424 | None:intergenic | 55.0% | |
| CCCGGTCCATTAGCATATGG+TGG | + | chr8.2:18707527-18707546 | None:intergenic | 55.0% | |
| CCGATAACCGAAACCGATCG+AGG | + | chr8.2:18704428-18704447 | None:intergenic | 55.0% | |
| CCTTTCAGAACGAGGTACGG+TGG | + | chr8.2:18704186-18704205 | None:intergenic | 55.0% | |
| CGTGAGAAGCTACAGCTTGG+AGG | + | chr8.2:18705229-18705248 | None:intergenic | 55.0% | |
| CTTATCCCACTAAGCGGGGT+CGG | + | chr8.2:18705053-18705072 | None:intergenic | 55.0% | |
| GACCCTAACGTCAACCCACA+TGG | + | chr8.2:18704488-18704507 | None:intergenic | 55.0% | |
| GCCCCACCACTACCTAACTT+TGG | - | chr8.2:18706523-18706542 | MS.gene60313:intron | 55.0% | |
| GGAGCAGGGCTTTACTCTTG+AGG | - | chr8.2:18706378-18706397 | MS.gene60313:intron | 55.0% | |
| GGCAGGTGAAGTGTGAGAAG+TGG | - | chr8.2:18706076-18706095 | MS.gene60313:intron | 55.0% | |
| GGGAAACCGTTGAGTTCGGA+AGG | - | chr8.2:18704524-18704543 | MS.gene60313:intron | 55.0% | |
| GGGAGATGATAGGCAAGCAG+AGG | - | chr8.2:18706104-18706123 | MS.gene60313:intron | 55.0% | |
| GGGTCGCATATAACGGTGGT+TGG | - | chr8.2:18704503-18704522 | MS.gene60313:intron | 55.0% | |
| GGTTATCGGGTCGGAGTTTG+CGG | - | chr8.2:18704439-18704458 | MS.gene60313:CDS | 55.0% | |
| TCGTTTCTCGGGTTTCGGAG+CGG | + | chr8.2:18704393-18704412 | None:intergenic | 55.0% | |
| TGCGGCGAATGGGAGTTTGA+TGG | - | chr8.2:18704457-18704476 | MS.gene60313:CDS | 55.0% | |
| TGGAAGGTGAAGACCCACCA+AGG | - | chr8.2:18704588-18704607 | MS.gene60313:intron | 55.0% | |
| ! | CCACCGTACCTCGTTCTGAA+AGG | - | chr8.2:18704183-18704202 | MS.gene60313:CDS | 55.0% |
| ! | GAACGCACTATGCATCGACC+TGG | + | chr8.2:18707671-18707690 | None:intergenic | 55.0% |
| ACCCGGGTCATGTCCTCGAT+CGG | - | chr8.2:18704412-18704431 | MS.gene60313:CDS | 60.0% | |
| ACCGATCGAGGACATGACCC+GGG | + | chr8.2:18704416-18704435 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCGCTTAG+TGG | - | chr8.2:18705044-18705063 | MS.gene60313:intron | 60.0% | |
| CAGCCATCCGCTCAGCGAAA+TGG | + | chr8.2:18706585-18706604 | None:intergenic | 60.0% | |
| CATGACCCGGGTCGTTTCTC+GGG | + | chr8.2:18704404-18704423 | None:intergenic | 60.0% | |
| CCGAAACCCGAGAAACGACC+CGG | - | chr8.2:18704395-18704414 | MS.gene60313:CDS | 60.0% | |
| CCGGGTCGTTTCTCGGGTTT+CGG | + | chr8.2:18704398-18704417 | None:intergenic | 60.0% | |
| CGAAACCCGAGAAACGACCC+GGG | - | chr8.2:18704396-18704415 | MS.gene60313:CDS | 60.0% | |
| GGTCGGAGTTTGCGGCGAAT+GGG | - | chr8.2:18704447-18704466 | MS.gene60313:CDS | 60.0% | |
| TGTAGCCGACCCCGCTTAGT+GGG | - | chr8.2:18705045-18705064 | MS.gene60313:intron | 60.0% | |
| GGGTCGGAGTTTGCGGCGAA+TGG | - | chr8.2:18704446-18704465 | MS.gene60313:CDS | 65.0% | |
| ! | TAGTGGTGGGGCACGCCATC+TGG | + | chr8.2:18706515-18706534 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18704041 | 18707938 | 18704041 | ID=MS.gene60313 |
| chr8.2 | mRNA | 18704041 | 18707938 | 18704041 | ID=MS.gene60313.t1;Parent=MS.gene60313 |
| chr8.2 | exon | 18707233 | 18707938 | 18707233 | ID=MS.gene60313.t1.exon1;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18707233 | 18707938 | 18707233 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18705677 | 18705909 | 18705677 | ID=MS.gene60313.t1.exon2;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18705677 | 18705909 | 18705677 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18705304 | 18705594 | 18705304 | ID=MS.gene60313.t1.exon3;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18705304 | 18705594 | 18705304 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18705090 | 18705218 | 18705090 | ID=MS.gene60313.t1.exon4;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18705090 | 18705218 | 18705090 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18704822 | 18704995 | 18704822 | ID=MS.gene60313.t1.exon5;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18704822 | 18704995 | 18704822 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18704369 | 18704476 | 18704369 | ID=MS.gene60313.t1.exon6;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18704369 | 18704476 | 18704369 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| chr8.2 | exon | 18704041 | 18704250 | 18704041 | ID=MS.gene60313.t1.exon7;Parent=MS.gene60313.t1 |
| chr8.2 | CDS | 18704041 | 18704250 | 18704041 | ID=cds.MS.gene60313.t1;Parent=MS.gene60313.t1 |
| Gene Sequence |
| Protein sequence |
