Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60317.t1 | XP_013457848.1 | 99.1 | 960 | 9 | 0 | 1 | 960 | 1 | 960 | 0.00E+00 | 1872.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60317.t1 | Q8GUL2 | 73.4 | 957 | 251 | 2 | 1 | 957 | 1 | 953 | 0.0e+00 | 1394.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60317.t1 | A0A072UQ05 | 99.1 | 960 | 9 | 0 | 1 | 960 | 1 | 960 | 0.0e+00 | 1872.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072925 | MS.gene60317 | PPI |
| MS.gene32605 | MS.gene60317 | PPI |
| MS.gene072924 | MS.gene60317 | PPI |
| MS.gene32604 | MS.gene60317 | PPI |
| MS.gene014809 | MS.gene60317 | PPI |
| MS.gene60317 | MS.gene32606 | PPI |
| MS.gene072926 | MS.gene60317 | PPI |
| MS.gene60317 | MS.gene014807 | PPI |
| MS.gene60317 | MS.gene014808 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60317.t1 | MTR_4g107290 | 99.062 | 960 | 9 | 0 | 1 | 960 | 1 | 960 | 0.0 | 1961 |
| MS.gene60317.t1 | MTR_4g107290 | 98.286 | 817 | 14 | 0 | 1 | 817 | 1 | 817 | 0.0 | 1661 |
| MS.gene60317.t1 | MTR_7g084880 | 24.284 | 943 | 575 | 35 | 1 | 877 | 1 | 870 | 4.80e-37 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60317.t1 | AT5G62600 | 73.354 | 957 | 251 | 2 | 1 | 957 | 1 | 953 | 0.0 | 1446 |
Find 196 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTGACGGCGCCTTTC+TGG | 0.098576 | 8.2:-18753966 | None:intergenic |
| ACCACTTCTACTCGAGATTT+TGG | 0.179131 | 8.2:-18765713 | None:intergenic |
| GATCTTAAGCATACTAAATT+TGG | 0.179535 | 8.2:+18758541 | MS.gene60317:CDS |
| ACCAATTATATCTCCTTTAC+AGG | 0.182837 | 8.2:+18761718 | MS.gene60317:CDS |
| TTCCAGCATTACCAGAATTT+TGG | 0.218743 | 8.2:+18765667 | MS.gene60317:CDS |
| CTGCTGCTGCTTTGGCGTTT+AGG | 0.220108 | 8.2:+18760712 | MS.gene60317:CDS |
| ACAGATGCTGCTTCAGTTCT+TGG | 0.226644 | 8.2:+18759415 | MS.gene60317:CDS |
| TGCACGTGCCTGCGCAAGAC+TGG | 0.241497 | 8.2:+18753036 | MS.gene60317:CDS |
| GAGACCACTCGAGTTGAATT+TGG | 0.268394 | 8.2:+18766087 | MS.gene60317:CDS |
| GATACCTGAGTTCTGACTTT+TGG | 0.279308 | 8.2:-18752866 | None:intergenic |
| CTATTGGAGCTTATTCAAAA+TGG | 0.281015 | 8.2:+18760601 | MS.gene60317:CDS |
| GGTGATGGTAGAGTGCATTT+AGG | 0.282469 | 8.2:-18751942 | None:intergenic |
| TGTTTCTAGGTGAGAACTTC+TGG | 0.284504 | 8.2:+18763031 | MS.gene60317:intron |
| ATGCGCAGCTGCTGCTGCTT+TGG | 0.293069 | 8.2:+18760704 | MS.gene60317:CDS |
| TCTCTCTAGTGAAGTTATAA+AGG | 0.317495 | 8.2:+18763138 | MS.gene60317:CDS |
| CTTTCAGAGGCATCTGTAAA+TGG | 0.322558 | 8.2:+18754958 | MS.gene60317:CDS |
| AGAATATATACCAGGATTCT+TGG | 0.327641 | 8.2:+18753109 | MS.gene60317:CDS |
| CTTCTATGACATTTAACTTC+TGG | 0.332488 | 8.2:+18757943 | MS.gene60317:CDS |
| GGTTGTTACTGAACTTCCTT+TGG | 0.333623 | 8.2:+18761661 | MS.gene60317:CDS |
| ATGTACTCATTCCGTTCATT+AGG | 0.336162 | 8.2:-18760674 | None:intergenic |
| AAACAATCATCTGCTATATC+AGG | 0.347089 | 8.2:-18764863 | None:intergenic |
| GATCTGGCAAACACCACAAC+GGG | 0.351236 | 8.2:+18765599 | MS.gene60317:CDS |
| ACCTGTAAAGGAGATATAAT+TGG | 0.353065 | 8.2:-18761719 | None:intergenic |
| CCGGCGCAATAGAGCAGTTC+AGG | 0.359465 | 8.2:+18766045 | MS.gene60317:CDS |
| TAATGAAGCAACCAAAATTC+TGG | 0.361242 | 8.2:-18765678 | None:intergenic |
| TTTGAGTATTGCTGAGCTTA+AGG | 0.363352 | 8.2:+18754040 | MS.gene60317:CDS |
| AAGCTTTGTGGATGCCTAGA+TGG | 0.364173 | 8.2:+18761451 | MS.gene60317:CDS |
| TTCAGTTGAACTTAACTAGA+AGG | 0.365216 | 8.2:+18757973 | MS.gene60317:CDS |
| TTAGTTGATTGCTCTATGAT+TGG | 0.367385 | 8.2:+18764953 | MS.gene60317:CDS |
| ATCAGAAAAGAAATGCAATA+TGG | 0.369741 | 8.2:-18765570 | None:intergenic |
| CAAAGTTTCTAGGTTGCTAC+TGG | 0.372507 | 8.2:-18752424 | None:intergenic |
| CTGGCATTAACTCGATCATA+TGG | 0.372635 | 8.2:+18765860 | MS.gene60317:CDS |
| AACAAAATATCAAAGTTTCT+AGG | 0.379466 | 8.2:-18752434 | None:intergenic |
| GCGCCTTCTCACAAGTATTC+AGG | 0.382690 | 8.2:+18764742 | MS.gene60317:CDS |
| AACTCCCTCCCACAGCGTTC+CGG | 0.384679 | 8.2:+18752618 | MS.gene60317:CDS |
| AAAGAAATGCAATATGGAAT+TGG | 0.385953 | 8.2:-18765564 | None:intergenic |
| GTGATGGTAGAGTGCATTTA+GGG | 0.387500 | 8.2:-18751941 | None:intergenic |
| GAAAGATCTTGATAATCTTC+AGG | 0.390550 | 8.2:-18758502 | None:intergenic |
| AAGAGCTCTCAGATGTTTGC+CGG | 0.394363 | 8.2:+18766026 | MS.gene60317:CDS |
| AAGAATCCTGGTATATATTC+TGG | 0.399730 | 8.2:-18753107 | None:intergenic |
| TCTTTCGTCTGAGGACCTTA+AGG | 0.403410 | 8.2:+18758519 | MS.gene60317:CDS |
| TAGTTGATTGCTCTATGATT+GGG | 0.404013 | 8.2:+18764954 | MS.gene60317:CDS |
| TTGAATTAACGGCGCATTAG+TGG | 0.404670 | 8.2:-18756378 | None:intergenic |
| GCTTTCAGGACCTTGATTGA+TGG | 0.405761 | 8.2:-18761825 | None:intergenic |
| GTTAATAGTGCATGCATTGT+TGG | 0.409191 | 8.2:+18757890 | MS.gene60317:CDS |
| AAAAGAGCTTACTTCTCAAA+TGG | 0.411218 | 8.2:+18753989 | MS.gene60317:CDS |
| TGCTAGGTTATTTGCGGACA+TGG | 0.415362 | 8.2:+18757676 | MS.gene60317:CDS |
| GCACGTGCCTGCGCAAGACT+GGG | 0.418882 | 8.2:+18753037 | MS.gene60317:CDS |
| TGAGGTACAGGAGGAAGTTT+CGG | 0.420153 | 8.2:-18760388 | None:intergenic |
| TAGTATGCTTAAGATCCTTA+AGG | 0.420919 | 8.2:-18758534 | None:intergenic |
| GAGAACTTCTGGAAGGTTCA+TGG | 0.424071 | 8.2:+18763042 | MS.gene60317:CDS |
| TTCATTACCATATGAAATAT+AGG | 0.426064 | 8.2:-18758085 | None:intergenic |
| AAGTCTGTGACAGCAGTTGA+TGG | 0.427316 | 8.2:-18765926 | None:intergenic |
| ACATCTGAGAGCTCTTCAAT+TGG | 0.428842 | 8.2:-18766019 | None:intergenic |
| AAAATGTGTACCCATGCTTT+AGG | 0.430489 | 8.2:-18754213 | None:intergenic |
| TTCTTGAGGCATTTGCTTCG+TGG | 0.431107 | 8.2:+18754185 | MS.gene60317:CDS |
| TGCATGCGAACGGTATCATC+AGG | 0.435786 | 8.2:-18751964 | None:intergenic |
| GCACTTTCAGATGTGGCATC+TGG | 0.443570 | 8.2:+18765971 | MS.gene60317:CDS |
| ATAGAAGCAATATCATATTC+TGG | 0.450197 | 8.2:-18757927 | None:intergenic |
| GACAGTGCTGTGAGAACTAA+TGG | 0.450318 | 8.2:-18754916 | None:intergenic |
| AGAACTTCTGGAAGGTTCAT+GGG | 0.457679 | 8.2:+18763043 | MS.gene60317:CDS |
| GGCAATTGCTAGGTTATTTG+CGG | 0.458595 | 8.2:+18757670 | MS.gene60317:CDS |
| GCTCACAATTGGTGCAATGC+TGG | 0.461031 | 8.2:+18763066 | MS.gene60317:CDS |
| TACGTGGAACTGATTGCAAC+TGG | 0.463073 | 8.2:+18757707 | MS.gene60317:CDS |
| TGCTGAAGACTCGTTGCACC+TGG | 0.470441 | 8.2:+18761528 | MS.gene60317:CDS |
| CAAAACAAAGCAGCTTCTGC+TGG | 0.471354 | 8.2:-18759811 | None:intergenic |
| TGGGATGCTAGCACTGGAAT+GGG | 0.471724 | 8.2:+18765880 | MS.gene60317:CDS |
| CAGATGCTATCCAACGGCTT+TGG | 0.472208 | 8.2:+18762042 | MS.gene60317:CDS |
| ATCAACTGCTGTCACAGACT+TGG | 0.474184 | 8.2:+18765928 | MS.gene60317:CDS |
| AGGGAGTCCTATATTTCATA+TGG | 0.477422 | 8.2:+18758078 | MS.gene60317:intron |
| GTGGAATAGTGAAATGGCTC+AGG | 0.479123 | 8.2:+18753066 | MS.gene60317:CDS |
| TTATCGATGCCAGTCGTGCT+TGG | 0.479355 | 8.2:+18762201 | MS.gene60317:intron |
| TATCGATGCCAGTCGTGCTT+GGG | 0.481166 | 8.2:+18762202 | MS.gene60317:intron |
| GCATCTGGAGGTGATACTAA+TGG | 0.483344 | 8.2:+18765986 | MS.gene60317:CDS |
| AGGTTCATGGGGCTCACAAT+TGG | 0.484154 | 8.2:+18763055 | MS.gene60317:CDS |
| TAGCATTGCAGTGGCTGCAT+TGG | 0.487025 | 8.2:+18753010 | MS.gene60317:CDS |
| ATCATATGGGATGCTAGCAC+TGG | 0.492621 | 8.2:+18765874 | MS.gene60317:CDS |
| TAATAGTAGTAATGAACAAA+AGG | 0.493694 | 8.2:+18759780 | MS.gene60317:CDS |
| TCGTGGCTTCGCCTAAAGCA+TGG | 0.493975 | 8.2:+18754202 | MS.gene60317:CDS |
| CTACTTGAAGAATTTGATTG+AGG | 0.495952 | 8.2:+18764700 | MS.gene60317:CDS |
| ATAATTATACTATCTCTGAT+TGG | 0.500717 | 8.2:-18765635 | None:intergenic |
| GGAACAATGACTTGAATTAA+CGG | 0.501505 | 8.2:-18756389 | None:intergenic |
| GTTTGTTCCACATCTACAAT+CGG | 0.503725 | 8.2:+18761473 | MS.gene60317:CDS |
| ATGGGATGCTAGCACTGGAA+TGG | 0.505235 | 8.2:+18765879 | MS.gene60317:CDS |
| CACGTGCCTGCGCAAGACTG+GGG | 0.505660 | 8.2:+18753038 | MS.gene60317:CDS |
| TCTACAATCGGACAGTTAGC+GGG | 0.506008 | 8.2:+18761485 | MS.gene60317:CDS |
| TCCTGGTATATATTCTGGAT+TGG | 0.507557 | 8.2:-18753102 | None:intergenic |
| TCAGGTGTCTTACACACTAC+TGG | 0.508893 | 8.2:+18765841 | MS.gene60317:intron |
| ACTTATTGAAGATGTTTCAC+AGG | 0.512750 | 8.2:+18752837 | MS.gene60317:CDS |
| AACCAAAATTCTGGTAATGC+TGG | 0.513710 | 8.2:-18765669 | None:intergenic |
| GTCTGGAGTAACTGAGGTAC+AGG | 0.515863 | 8.2:-18760400 | None:intergenic |
| TCCAAAATCTCGAGTAGAAG+TGG | 0.516359 | 8.2:+18765712 | MS.gene60317:CDS |
| ATAGGTTCAACGAGACTTTG+AGG | 0.517531 | 8.2:+18752595 | MS.gene60317:intron |
| ATCATCTGCTATATCAGGCC+GGG | 0.517909 | 8.2:-18764858 | None:intergenic |
| CGCAGTGGCCGGAACGCTGT+GGG | 0.518600 | 8.2:-18752626 | None:intergenic |
| TGAGAACTAAGAACAGATCC+AGG | 0.519500 | 8.2:-18754892 | None:intergenic |
| CACCAGGAAGCCATCAATCA+AGG | 0.520597 | 8.2:+18761815 | MS.gene60317:intron |
| ACGAACTCTCGATGCGTGGC+AGG | 0.521472 | 8.2:+18752014 | MS.gene60317:CDS |
| TTATGAGTCACTTGTATCAC+TGG | 0.524132 | 8.2:+18758158 | MS.gene60317:CDS |
| CTTAAAAGCACTTTCAGATG+TGG | 0.524206 | 8.2:+18765964 | MS.gene60317:CDS |
| ACTGCAGCAGGAAACATTGA+TGG | 0.524667 | 8.2:+18756350 | MS.gene60317:CDS |
| CGTGGCTTCGCCTAAAGCAT+GGG | 0.525982 | 8.2:+18754203 | MS.gene60317:CDS |
| GTAAGTAACTCCAAGAATCC+TGG | 0.526444 | 8.2:-18753119 | None:intergenic |
| AGATGTGGAACAAACCATCT+AGG | 0.527298 | 8.2:-18761465 | None:intergenic |
| TGGCATTAACTCGATCATAT+GGG | 0.528627 | 8.2:+18765861 | MS.gene60317:CDS |
| CTGGTAATGCTGGAACCTCT+AGG | 0.529849 | 8.2:-18765659 | None:intergenic |
| ATTAGGATATCTAAAACTGA+AGG | 0.531489 | 8.2:-18760657 | None:intergenic |
| TATTGCTGAGCTTAAGGAGC+AGG | 0.531789 | 8.2:+18754046 | MS.gene60317:CDS |
| TTGATACACTACACTGCAGC+AGG | 0.533207 | 8.2:+18756338 | MS.gene60317:CDS |
| GCGTTTAGGCACATCTGTGA+TGG | 0.535100 | 8.2:+18760726 | MS.gene60317:CDS |
| AGACAGACACTAACCTGTAA+AGG | 0.539733 | 8.2:-18761731 | None:intergenic |
| TTCTCAAACCTTGAGAAGCA+AGG | 0.540410 | 8.2:+18752455 | MS.gene60317:CDS |
| AGAGATAAAGAAAGCATGGC+TGG | 0.541269 | 8.2:-18763120 | None:intergenic |
| ACGTGCCTGCGCAAGACTGG+GGG | 0.542065 | 8.2:+18753039 | MS.gene60317:CDS |
| TGAGAAGGCGCGTTGTGTGC+CGG | 0.542492 | 8.2:-18764730 | None:intergenic |
| GAATTCTGAGCTACTTTCAG+AGG | 0.544543 | 8.2:+18754945 | MS.gene60317:CDS |
| TAGAATCACCTTGCTTCTCA+AGG | 0.546247 | 8.2:-18752463 | None:intergenic |
| TCGAAGCTGAGAGAAATAAG+AGG | 0.546761 | 8.2:+18758115 | MS.gene60317:CDS |
| TTCAAGTAGTCAGCACAAGA+TGG | 0.546980 | 8.2:-18764686 | None:intergenic |
| ATTTCTTGTTTCAGCTGTTG+CGG | 0.548666 | 8.2:+18759384 | MS.gene60317:intron |
| ACATTTCTTTCAGGTTCTTG+AGG | 0.549075 | 8.2:+18754171 | MS.gene60317:intron |
| GCTCTTCAATTGGAACAGAT+AGG | 0.551551 | 8.2:-18766009 | None:intergenic |
| GATTTAAGATTCATAACTTG+AGG | 0.553612 | 8.2:-18756410 | None:intergenic |
| TTAATGAGTCACGCAGTGGC+CGG | 0.554229 | 8.2:-18752637 | None:intergenic |
| AATCATCTGCTATATCAGGC+CGG | 0.556123 | 8.2:-18764859 | None:intergenic |
| AGGAGGAAGTTTCGGAAGCA+AGG | 0.561915 | 8.2:-18760380 | None:intergenic |
| CTAGAGAGATAAAGAAAGCA+TGG | 0.562240 | 8.2:-18763124 | None:intergenic |
| TGAGAGAAATAAGAGGCTGC+AGG | 0.564111 | 8.2:+18758122 | MS.gene60317:CDS |
| CCTGAACTGCTCTATTGCGC+CGG | 0.564941 | 8.2:-18766045 | None:intergenic |
| ATCTACAATCGGACAGTTAG+CGG | 0.565539 | 8.2:+18761484 | MS.gene60317:CDS |
| GAAATGGCTCAGGGATGAGA+TGG | 0.566339 | 8.2:+18753076 | MS.gene60317:CDS |
| TGCTGCAGGAATTCACAGCC+CGG | 0.568216 | 8.2:+18764840 | MS.gene60317:intron |
| GTCTTGCGCAGGCACGTGCA+CGG | 0.569298 | 8.2:-18753033 | None:intergenic |
| GATGCTGCTTCAGTTCTTGG+TGG | 0.569638 | 8.2:+18759418 | MS.gene60317:CDS |
| TCCAATCCAGAATATATACC+AGG | 0.571375 | 8.2:+18753101 | MS.gene60317:CDS |
| CTTATTGAAGATGTTTCACA+GGG | 0.574106 | 8.2:+18752838 | MS.gene60317:CDS |
| GCTAGGTTATTTGCGGACAT+GGG | 0.577306 | 8.2:+18757677 | MS.gene60317:CDS |
| GGGATGGTGGAATAGTGAAA+TGG | 0.577712 | 8.2:+18753060 | MS.gene60317:CDS |
| ATAGCATCTGCCACAACTTG+AGG | 0.577992 | 8.2:-18762029 | None:intergenic |
| ACGCAGTGGCCGGAACGCTG+TGG | 0.578195 | 8.2:-18752627 | None:intergenic |
| AGTGGCCGGAACGCTGTGGG+AGG | 0.579145 | 8.2:-18752623 | None:intergenic |
| TTATCAAGATCTTTCGTCTG+AGG | 0.579528 | 8.2:+18758510 | MS.gene60317:CDS |
| AAAGTTTCTAGGTTGCTACT+GGG | 0.580198 | 8.2:-18752423 | None:intergenic |
| GAACGGTATCATCAGGGTGA+TGG | 0.581180 | 8.2:-18751957 | None:intergenic |
| TGCACCTGGTTGAAGCCTTG+AGG | 0.582099 | 8.2:+18761542 | MS.gene60317:CDS |
| TGAAGCAGAAGTAATGCCTC+AGG | 0.588060 | 8.2:+18759867 | MS.gene60317:CDS |
| GTGGCCGGAACGCTGTGGGA+GGG | 0.589687 | 8.2:-18752622 | None:intergenic |
| AAAATTCTGAAGAAAGCGAT+CGG | 0.591927 | 8.2:-18751989 | None:intergenic |
| TCTAGGTGAGAACTTCTGGA+AGG | 0.592234 | 8.2:+18763035 | MS.gene60317:intron |
| AAGACGTGAAGGCAATTGCT+AGG | 0.592247 | 8.2:+18757660 | MS.gene60317:CDS |
| GTAGTAATGAACAAAAGGAA+TGG | 0.592630 | 8.2:+18759785 | MS.gene60317:CDS |
| AGATAGCAGCTCGTCCAGAA+AGG | 0.593820 | 8.2:+18753952 | MS.gene60317:CDS |
| GATACAAGTGACTCATAAGC+AGG | 0.595058 | 8.2:-18758153 | None:intergenic |
| TGTAAAACATCCTCAAGTTG+TGG | 0.595777 | 8.2:+18762019 | MS.gene60317:CDS |
| GTACCTCAGTTACTCCAGAC+AGG | 0.597881 | 8.2:+18760403 | MS.gene60317:CDS |
| TTCAACGAACTCTCGATGCG+TGG | 0.600610 | 8.2:+18752010 | MS.gene60317:CDS |
| TGATGCTAAGAGAGCACTTG+AGG | 0.604844 | 8.2:+18761685 | MS.gene60317:CDS |
| AGAGCTTACTTCTCAAATGG+AGG | 0.608823 | 8.2:+18753992 | MS.gene60317:CDS |
| TTAGGATATCTAAAACTGAA+GGG | 0.610429 | 8.2:-18760656 | None:intergenic |
| CTTTCAGATGTGGCATCTGG+AGG | 0.611122 | 8.2:+18765974 | MS.gene60317:CDS |
| TCTGTATATGAAACTTCTTG+AGG | 0.616717 | 8.2:+18759459 | MS.gene60317:CDS |
| ACACCTGAATACTTGTGAGA+AGG | 0.616732 | 8.2:-18764745 | None:intergenic |
| TGATCTGGCAAACACCACAA+CGG | 0.616742 | 8.2:+18765598 | MS.gene60317:CDS |
| ATTTGGTGTGTGTATCATAG+AGG | 0.620229 | 8.2:+18766104 | MS.gene60317:CDS |
| TCCTCCAAAAGTCAGAACTC+AGG | 0.621151 | 8.2:+18752862 | MS.gene60317:CDS |
| ATTACCTCAAGGCTTCAACC+AGG | 0.621335 | 8.2:-18761546 | None:intergenic |
| AATCTTCAGGATACTGAACC+CGG | 0.622658 | 8.2:-18758489 | None:intergenic |
| CTTGTAGATTAGCATTGCAG+TGG | 0.625006 | 8.2:+18753001 | MS.gene60317:intron |
| GATAGTATAATTATTCCTAG+AGG | 0.627753 | 8.2:+18765644 | MS.gene60317:CDS |
| GAACTTCTGGAAGGTTCATG+GGG | 0.631980 | 8.2:+18763044 | MS.gene60317:CDS |
| TTGGGATCACAGTACAGCAT+AGG | 0.632307 | 8.2:+18764972 | MS.gene60317:CDS |
| TAACTGTCCGATTGTAGATG+TGG | 0.641888 | 8.2:-18761480 | None:intergenic |
| TTAGGATGAGGAAGACGTGA+AGG | 0.645745 | 8.2:+18757649 | MS.gene60317:intron |
| TGCAGTGTAGTGTATCAACT+CGG | 0.648103 | 8.2:-18756333 | None:intergenic |
| CTACAATCGGACAGTTAGCG+GGG | 0.649155 | 8.2:+18761486 | MS.gene60317:CDS |
| GCGATCGGCTTGCATGCGAA+CGG | 0.654628 | 8.2:-18751974 | None:intergenic |
| CACACCAAATTCAACTCGAG+TGG | 0.659599 | 8.2:-18766091 | None:intergenic |
| GGGAGTATAGACAGTCCACA+TGG | 0.662541 | 8.2:-18760636 | None:intergenic |
| TTGTGGCAGATGCTATCCAA+CGG | 0.663478 | 8.2:+18762036 | MS.gene60317:CDS |
| TGGAGTAACTGAGGTACAGG+AGG | 0.663724 | 8.2:-18760397 | None:intergenic |
| GCTCTCTTAGCATCATCCAA+AGG | 0.665930 | 8.2:-18761677 | None:intergenic |
| GCATGCGAACGGTATCATCA+GGG | 0.670467 | 8.2:-18751963 | None:intergenic |
| ACATTTAATGAGTCACGCAG+TGG | 0.679600 | 8.2:-18752641 | None:intergenic |
| GATAAAGAAAGCATGGCTGG+TGG | 0.682032 | 8.2:-18763117 | None:intergenic |
| ATAGAGCAATCAACTAACGA+AGG | 0.684184 | 8.2:-18764947 | None:intergenic |
| TTACCTGTCTGGAGTAACTG+AGG | 0.686806 | 8.2:-18760406 | None:intergenic |
| TGCTTGGGACATGAGAACAA+TGG | 0.695535 | 8.2:+18762217 | MS.gene60317:CDS |
| TGGCTTGATACAGCACCATG+TGG | 0.697379 | 8.2:+18760621 | MS.gene60317:CDS |
| CGTGCCTGCGCAAGACTGGG+GGG | 0.701717 | 8.2:+18753040 | MS.gene60317:CDS |
| ACAGCTGAGTGATTCTACGA+AGG | 0.703842 | 8.2:+18756433 | MS.gene60317:CDS |
| TGGAATAGTGAAATGGCTCA+GGG | 0.714001 | 8.2:+18753067 | MS.gene60317:CDS |
| ATCTGGCAAACACCACAACG+GGG | 0.717394 | 8.2:+18765600 | MS.gene60317:CDS |
| TCTGGCAAACACCACAACGG+GGG | 0.728992 | 8.2:+18765601 | MS.gene60317:CDS |
| GGCGAGGGGATAAACAACTG+AGG | 0.741182 | 8.2:-18764917 | None:intergenic |
| GGACATGGGTGATTCATACG+TGG | 0.757265 | 8.2:+18757691 | MS.gene60317:CDS |
| TTATTGAAGATGTTTCACAG+GGG | 0.817174 | 8.2:+18752839 | MS.gene60317:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18751913 | 18766123 | 18751913 | ID=MS.gene60317 |
| chr8.2 | mRNA | 18751913 | 18766123 | 18751913 | ID=MS.gene60317.t1;Parent=MS.gene60317 |
| chr8.2 | exon | 18751913 | 18752035 | 18751913 | ID=MS.gene60317.t1.exon1;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18751913 | 18752035 | 18751913 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18752399 | 18752476 | 18752399 | ID=MS.gene60317.t1.exon2;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18752399 | 18752476 | 18752399 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18752599 | 18752661 | 18752599 | ID=MS.gene60317.t1.exon3;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18752599 | 18752661 | 18752599 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18752836 | 18752883 | 18752836 | ID=MS.gene60317.t1.exon4;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18752836 | 18752883 | 18752836 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18753008 | 18753154 | 18753008 | ID=MS.gene60317.t1.exon5;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18753008 | 18753154 | 18753008 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18753936 | 18754067 | 18753936 | ID=MS.gene60317.t1.exon6;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18753936 | 18754067 | 18753936 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18754184 | 18754224 | 18754184 | ID=MS.gene60317.t1.exon7;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18754184 | 18754224 | 18754184 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18754888 | 18754979 | 18754888 | ID=MS.gene60317.t1.exon8;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18754888 | 18754979 | 18754888 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18756327 | 18756454 | 18756327 | ID=MS.gene60317.t1.exon9;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18756327 | 18756454 | 18756327 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18757653 | 18757728 | 18757653 | ID=MS.gene60317.t1.exon10;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18757653 | 18757728 | 18757653 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18757874 | 18757994 | 18757874 | ID=MS.gene60317.t1.exon11;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18757874 | 18757994 | 18757874 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18758080 | 18758179 | 18758080 | ID=MS.gene60317.t1.exon12;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18758080 | 18758179 | 18758080 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18758481 | 18758562 | 18758481 | ID=MS.gene60317.t1.exon13;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18758481 | 18758562 | 18758481 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18759398 | 18759480 | 18759398 | ID=MS.gene60317.t1.exon14;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18759398 | 18759480 | 18759398 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18759769 | 18759888 | 18759769 | ID=MS.gene60317.t1.exon15;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18759769 | 18759888 | 18759769 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18760373 | 18760424 | 18760373 | ID=MS.gene60317.t1.exon16;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18760373 | 18760424 | 18760373 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18760592 | 18760747 | 18760592 | ID=MS.gene60317.t1.exon17;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18760592 | 18760747 | 18760592 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18761440 | 18761563 | 18761440 | ID=MS.gene60317.t1.exon18;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18761440 | 18761563 | 18761440 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18761658 | 18761739 | 18761658 | ID=MS.gene60317.t1.exon19;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18761658 | 18761739 | 18761658 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18761821 | 18761909 | 18761821 | ID=MS.gene60317.t1.exon20;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18761821 | 18761909 | 18761821 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18762016 | 18762090 | 18762016 | ID=MS.gene60317.t1.exon21;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18762016 | 18762090 | 18762016 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18762214 | 18762268 | 18762214 | ID=MS.gene60317.t1.exon22;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18762214 | 18762268 | 18762214 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18763040 | 18763159 | 18763040 | ID=MS.gene60317.t1.exon23;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18763040 | 18763159 | 18763040 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18764671 | 18764763 | 18764671 | ID=MS.gene60317.t1.exon24;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18764671 | 18764763 | 18764671 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18764848 | 18764993 | 18764848 | ID=MS.gene60317.t1.exon25;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18764848 | 18764993 | 18764848 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18765556 | 18765733 | 18765556 | ID=MS.gene60317.t1.exon26;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18765556 | 18765733 | 18765556 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| chr8.2 | exon | 18765845 | 18766123 | 18765845 | ID=MS.gene60317.t1.exon27;Parent=MS.gene60317.t1 |
| chr8.2 | CDS | 18765845 | 18766123 | 18765845 | ID=cds.MS.gene60317.t1;Parent=MS.gene60317.t1 |
| Gene Sequence |
| Protein sequence |
