AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60327

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60327.t1 MTR_4g106590 92.558 215 4 3 1 203 1 215 3.52e-136 380
MS.gene60327.t1 MTR_3g078613 67.606 213 46 6 1 203 1 200 7.23e-88 257
MS.gene60327.t1 MTR_3g078613 67.290 214 46 7 1 203 1 201 4.15e-86 253
MS.gene60327.t1 MTR_5g036480 65.734 143 36 2 25 154 15 157 5.18e-55 175
MS.gene60327.t1 MTR_1g049100 64.286 140 39 2 21 149 3 142 4.27e-54 171
MS.gene60327.t1 MTR_7g490310 51.235 162 61 3 21 164 4 165 4.11e-49 160
MS.gene60327.t1 MTR_8g038620 51.205 166 62 3 21 168 4 168 4.22e-48 155
MS.gene60327.t1 MTR_3g093860 53.030 132 49 3 27 146 19 149 3.64e-40 134
MS.gene60327.t1 MTR_3g015490 45.509 167 62 4 24 168 2 161 1.59e-37 128
MS.gene60327.t1 MTR_3g088630 46.309 149 52 4 25 146 21 168 2.89e-36 127
MS.gene60327.t1 MTR_6g007460 37.374 198 62 3 16 151 1 198 1.84e-31 114
MS.gene60327.t1 MTR_4g051330 50.000 74 37 0 95 168 77 150 2.43e-18 78.6
MS.gene60327.t1 MTR_3g092780 27.451 102 74 0 72 173 102 203 5.90e-13 67.4
MS.gene60327.t1 MTR_3g092780 27.451 102 74 0 72 173 102 203 7.23e-13 67.0
MS.gene60327.t1 MTR_8g024260 28.082 146 89 3 6 149 28 159 7.79e-13 67.0
MS.gene60327.t1 MTR_3g092780 34.667 75 49 0 72 146 102 176 1.89e-12 65.9
MS.gene60327.t1 MTR_3g092780 34.667 75 49 0 72 146 102 176 2.03e-12 65.5
MS.gene60327.t1 MTR_7g118260 29.825 114 74 2 72 182 60 170 1.34e-11 63.2
MS.gene60327.t1 MTR_1g067110 36.000 75 48 0 72 146 131 205 2.48e-11 62.4
MS.gene60327.t1 MTR_1g067110 36.000 75 48 0 72 146 131 205 2.61e-11 62.4
MS.gene60327.t1 MTR_7g118260 26.214 103 76 0 72 174 60 162 9.05e-11 60.8
MS.gene60327.t1 MTR_4g061360 29.231 130 74 2 26 146 89 209 9.57e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60327.t1 AT3G48100 61.798 178 56 3 5 170 2 179 1.76e-67 205
MS.gene60327.t1 AT5G62920 68.421 152 39 1 26 168 25 176 3.43e-64 197
MS.gene60327.t1 AT1G74890 66.892 148 37 3 25 160 17 164 5.11e-60 187
MS.gene60327.t1 AT1G59940 54.271 199 72 4 16 196 23 220 2.29e-59 186
MS.gene60327.t1 AT1G19050 58.235 170 46 4 3 157 2 161 2.14e-58 182
MS.gene60327.t1 AT1G10470 67.143 140 37 1 16 146 10 149 2.76e-58 184
MS.gene60327.t1 AT1G59940 54.271 199 72 4 16 196 115 312 5.58e-58 185
MS.gene60327.t1 AT1G10470 67.143 140 37 1 16 146 24 163 5.60e-58 183
MS.gene60327.t1 AT3G57040 54.667 150 49 3 21 151 4 153 2.97e-47 155
MS.gene60327.t1 AT3G57040 54.667 150 49 3 21 151 4 153 2.97e-47 155
MS.gene60327.t1 AT2G41310 55.556 144 47 2 24 150 7 150 6.50e-47 154
MS.gene60327.t1 AT2G40670 55.224 134 48 2 25 146 28 161 4.95e-45 147
MS.gene60327.t1 AT3G56380 55.303 132 49 2 25 146 19 150 2.33e-44 145
MS.gene60327.t1 AT2G40670 54.815 135 48 3 25 146 28 162 2.42e-43 143
MS.gene60327.t1 AT3G56380 54.887 133 49 3 25 146 19 151 1.30e-42 140
MS.gene60327.t1 AT1G10470 67.692 65 20 1 94 157 35 99 3.89e-22 89.4
MS.gene60327.t1 AT2G07440 64.286 56 20 0 95 150 9 64 1.95e-16 73.2
MS.gene60327.t1 AT5G24470 33.333 78 52 0 72 149 96 173 1.23e-12 66.2
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 2.17e-11 62.4
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 2.17e-11 62.4
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 2.17e-11 62.4
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 3.01e-11 62.0
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 3.38e-11 62.0
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 3.38e-11 62.0
MS.gene60327.t1 AT5G60100 34.667 75 49 0 72 146 110 184 3.38e-11 62.0
MS.gene60327.t1 AT1G67710 29.677 155 85 6 16 158 1 143 5.26e-11 61.6
MS.gene60327.t1 AT2G46790 30.667 75 52 0 72 146 83 157 9.90e-11 60.5

Find 36 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCATGATAAAATCTTTC+AGG 0.209124 8.2:+18919892 None:intergenic
TCATAATCTTGATTTCTTAG+AGG 0.316444 8.2:+18919719 None:intergenic
GTCGAATTTGACGGAGTTGA+TGG 0.327382 8.2:-18921584 MS.gene60327:CDS
TTCACTAATTTGCAGGTGTT+TGG 0.354372 8.2:-18919970 MS.gene60327:intron
TTCTTAGAGGATAATGTTGA+TGG 0.406515 8.2:+18919732 None:intergenic
TTGATGGAGGAATCACCTTC+AGG 0.454395 8.2:-18921568 MS.gene60327:CDS
TATTCCATGCCGGGGATGAC+AGG 0.470500 8.2:-18921116 MS.gene60327:CDS
CTTACATCTGACAATTTGAC+TGG 0.476820 8.2:+18919918 None:intergenic
ATGACGGATTATTCCATGCC+GGG 0.493470 8.2:-18921125 MS.gene60327:CDS
CAGTTTGCTATGGCTGCCGC+CGG 0.493752 8.2:-18921619 None:intergenic
GATGGAGAGAACAGTGATGT+TGG 0.500241 8.2:-18921273 MS.gene60327:CDS
GAGGAATCACCTTCAGGTGC+AGG 0.503243 8.2:-18921562 MS.gene60327:CDS
GAAGGTTAATTTGATAATGA+CGG 0.519870 8.2:-18921141 MS.gene60327:CDS
ACTAATTTGCAGGTGTTTGG+AGG 0.520826 8.2:-18919967 MS.gene60327:intron
ATTTGCAGGTGTTTGGAGGA+AGG 0.521653 8.2:-18919963 MS.gene60327:intron
TGAATTACTCAAGAAAATCA+AGG 0.543151 8.2:-18921090 MS.gene60327:intron
AATTCATATCCTGTCATCCC+CGG 0.556181 8.2:+18921107 None:intergenic
TCCGACGACATGATCACCAC+TGG 0.559021 8.2:+18920897 None:intergenic
GTGTTTGGAGGAAGGAGCAG+AGG 0.569038 8.2:-18919955 MS.gene60327:CDS
ATATCCTGTCATCCCCGGCA+TGG 0.579959 8.2:+18921112 None:intergenic
GATAATGTTGATGGCGAGAG+TGG 0.585842 8.2:+18919741 None:intergenic
GTTATGGTGGCAGGGTGTGA+AGG 0.590843 8.2:-18921159 MS.gene60327:intron
TCAACTCCGTCAAATTCGAC+CGG 0.594767 8.2:+18921587 None:intergenic
TCCAGTGGTGATCATGTCGT+CGG 0.595178 8.2:-18920898 MS.gene60327:CDS
TGCAATTCACCTGCACCTGA+AGG 0.595358 8.2:+18921553 None:intergenic
AATGACGGATTATTCCATGC+CGG 0.601249 8.2:-18921126 MS.gene60327:CDS
TATCATGAGAGGTGAAGTGA+AGG 0.611120 8.2:-18919880 MS.gene60327:CDS
ATGAGAGGTGAAGTGAAGGA+TGG 0.617352 8.2:-18919876 MS.gene60327:CDS
GGATCACATGAATGACGCAT+TGG 0.617664 8.2:+18919783 None:intergenic
ATTCGACCGGAAAATCTCGC+CGG 0.617787 8.2:+18921600 None:intergenic
GAATTTGACGGAGTTGATGG+AGG 0.621403 8.2:-18921581 MS.gene60327:CDS
GAGAATGTAGTTGATAGAGA+TGG 0.621435 8.2:+18919807 None:intergenic
TGACGGATTATTCCATGCCG+GGG 0.653217 8.2:-18921124 MS.gene60327:CDS
CGACCGGAAAATCTCGCCGG+CGG 0.669618 8.2:+18921603 None:intergenic
GGTGAGAACACTGACGATGG+TGG 0.724751 8.2:+18919762 None:intergenic
AGTGGTGAGAACACTGACGA+TGG 0.780723 8.2:+18919759 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATTTTTTATTTTAT+TGG - chr8.2:18920949-18920968 MS.gene60327:intron 0.0%
!! AATAAAAAGAAACAAATAAA+AGG - chr8.2:18921078-18921097 MS.gene60327:intron 10.0%
!!! TTTGTTTCTTTTTATTTTTT+TGG + chr8.2:18921074-18921093 None:intergenic 10.0%
!! AAACAAATAAAAGGAATATT+TGG - chr8.2:18921087-18921106 MS.gene60327:intron 15.0%
!! ATATGTACATTTGTATTATA+TGG - chr8.2:18921197-18921216 MS.gene60327:intron 15.0%
!!! ATTGATTTTGAAAATGTTTT+TGG - chr8.2:18919966-18919985 MS.gene60327:intron 15.0%
!!! ATTTTGAAATTTTATATTGG+AGG - chr8.2:18920339-18920358 MS.gene60327:intron 15.0%
!! AAATAAAACTATTAAGAAGC+AGG + chr8.2:18921340-18921359 None:intergenic 20.0%
!! AACTATCAACAATTCAAATA+AGG + chr8.2:18920297-18920316 None:intergenic 20.0%
!! CAAGGTGATTAATTAATTAT+TGG - chr8.2:18920257-18920276 MS.gene60327:intron 20.0%
!!! ACAAATGTACATATTCTTTT+GGG + chr8.2:18921191-18921210 None:intergenic 20.0%
!!! TACAAATGTACATATTCTTT+TGG + chr8.2:18921192-18921211 None:intergenic 20.0%
!!! TTATTTGTTAACACTAAGAA+CGG - chr8.2:18920756-18920775 MS.gene60327:intron 20.0%
!!! TTGTTTTTTTGTTTCAGTTA+CGG - chr8.2:18919992-18920011 MS.gene60327:intron 20.0%
!!! TTTTATTTTCACTAATTTGC+AGG - chr8.2:18921352-18921371 MS.gene60327:intron 20.0%
! ACAAATAAACTTAAGTAGCA+TGG + chr8.2:18920744-18920763 None:intergenic 25.0%
! ATGTAAGCAAATTATGTTTC+TGG - chr8.2:18920084-18920103 MS.gene60327:intron 25.0%
! CAGATTAGATGCATATTTAT+GGG + chr8.2:18920622-18920641 None:intergenic 25.0%
! GAATTTATTTCCTGATTAAG+TGG + chr8.2:18920645-18920664 None:intergenic 25.0%
! TCATAATCTTGATTTCTTAG+AGG + chr8.2:18921613-18921632 None:intergenic 25.0%
! TGAATTACTCAAGAAAATCA+AGG - chr8.2:18920239-18920258 MS.gene60327:intron 25.0%
!! ATATTTGGCAAGAATCTTTT+AGG - chr8.2:18921102-18921121 MS.gene60327:CDS 25.0%
!! ATGTTTTCATACGATTGATA+AGG + chr8.2:18921015-18921034 None:intergenic 25.0%
!! TGAAATTTTATATTGGAGGA+AGG - chr8.2:18920343-18920362 MS.gene60327:intron 25.0%
!!! GAAGGTTAATTTGATAATGA+CGG - chr8.2:18920188-18920207 MS.gene60327:intron 25.0%
!!! GTTGTTGTTTTGTTATGTTA+TGG - chr8.2:18920154-18920173 MS.gene60327:intron 25.0%
ACATTTACTTTCTATGCTGT+GGG - chr8.2:18921297-18921316 MS.gene60327:CDS 30.0%
ACTTTGCTTGGATGTTAATT+TGG - chr8.2:18920114-18920133 MS.gene60327:intron 30.0%
ATGTAATTGTAATTGCCACA+CGG - chr8.2:18921146-18921165 MS.gene60327:CDS 30.0%
ATTACAATTACATCGGTAGA+AGG + chr8.2:18921139-18921158 None:intergenic 30.0%
CTCTCATGATAAAATCTTTC+AGG + chr8.2:18921440-18921459 None:intergenic 30.0%
GAAATCTGGAGAACTTAATT+TGG + chr8.2:18920889-18920908 None:intergenic 30.0%
GCAGATTAGATGCATATTTA+TGG + chr8.2:18920623-18920642 None:intergenic 30.0%
TCTGGATTATTAACTTTGCT+TGG - chr8.2:18920102-18920121 MS.gene60327:intron 30.0%
TGATCCAAGTTAAAAGAGTT+GGG + chr8.2:18920920-18920939 None:intergenic 30.0%
TGGTGAATAACATGTGTATT+TGG - chr8.2:18920528-18920547 MS.gene60327:intron 30.0%
TGTGGCAATTACAATTACAT+CGG + chr8.2:18921146-18921165 None:intergenic 30.0%
TGTTTCAAATCACTCAGATA+GGG - chr8.2:18920818-18920837 MS.gene60327:intron 30.0%
TTATGCCTCCATATCTATTT+GGG + chr8.2:18920679-18920698 None:intergenic 30.0%
TTCTTAGAGGATAATGTTGA+TGG + chr8.2:18921600-18921619 None:intergenic 30.0%
TTGAAGATTTCTTCATGCAA+AGG - chr8.2:18919851-18919870 MS.gene60327:CDS 30.0%
TTGGAACTCGAATAAGTTTA+TGG - chr8.2:18920968-18920987 MS.gene60327:intron 30.0%
! AATTTTATATTGGAGGAAGG+TGG - chr8.2:18920346-18920365 MS.gene60327:intron 30.0%
! CTGAAAGATTTTATCATGAG+AGG - chr8.2:18921438-18921457 MS.gene60327:intron 30.0%
! TGTATTATATGGAGTGCTTT+AGG - chr8.2:18921208-18921227 MS.gene60327:intron 30.0%
!! CTTTTGATTCTAGTGTGATT+TGG - chr8.2:18920504-18920523 MS.gene60327:intron 30.0%
!! GTTGTTTTGTTATGTTATGG+TGG - chr8.2:18920157-18920176 MS.gene60327:intron 30.0%
!! TATGGTGTTATTTGTTTCCT+TGG - chr8.2:18920986-18921005 MS.gene60327:intron 30.0%
!!! ATGTTTTGACTCGAATTGAT+AGG - chr8.2:18920457-18920476 MS.gene60327:intron 30.0%
AAACTATTAAGAAGCAGGAC+AGG + chr8.2:18921335-18921354 None:intergenic 35.0%
ACACCAGATTAGAATTCAGT+AGG + chr8.2:18920586-18920605 None:intergenic 35.0%
CAATAATATGTAGAACCGTG+TGG + chr8.2:18921164-18921183 None:intergenic 35.0%
CACATTTACTTTCTATGCTG+TGG - chr8.2:18921296-18921315 MS.gene60327:CDS 35.0%
CTGATCCAAGTTAAAAGAGT+TGG + chr8.2:18920921-18920940 None:intergenic 35.0%
CTGCTGAAATTAACACAAAC+AGG + chr8.2:18920388-18920407 None:intergenic 35.0%
CTGTTTGTGTTAATTTCAGC+AGG - chr8.2:18920386-18920405 MS.gene60327:intron 35.0%
CTTACATCTGACAATTTGAC+TGG + chr8.2:18921414-18921433 None:intergenic 35.0%
CTTATGCCTCCATATCTATT+TGG + chr8.2:18920680-18920699 None:intergenic 35.0%
GTGTAGATCCCAAATAGATA+TGG - chr8.2:18920668-18920687 MS.gene60327:intron 35.0%
GTGTTTCAAATCACTCAGAT+AGG - chr8.2:18920817-18920836 MS.gene60327:intron 35.0%
GTTCCTACTGAATTCTAATC+TGG - chr8.2:18920580-18920599 MS.gene60327:intron 35.0%
TAGATCCCAAATAGATATGG+AGG - chr8.2:18920671-18920690 MS.gene60327:intron 35.0%
TTAAAAGAGTTGGGTCTTCA+GGG + chr8.2:18920911-18920930 None:intergenic 35.0%
TTTAACTGTTGAAGCTCCAT+AGG - chr8.2:18920707-18920726 MS.gene60327:intron 35.0%
! AAGAAGAGCTCTTCAGTTTT+TGG - chr8.2:18920028-18920047 MS.gene60327:intron 35.0%
! AGAAGAGCTCTTCAGTTTTT+GGG - chr8.2:18920029-18920048 MS.gene60327:intron 35.0%
! ATCTAATCTGCCACTTAATC+AGG - chr8.2:18920632-18920651 MS.gene60327:intron 35.0%
! TGATTCTAGTGTGATTTGGA+TGG - chr8.2:18920508-18920527 MS.gene60327:intron 35.0%
! TTCACTAATTTGCAGGTGTT+TGG - chr8.2:18921359-18921378 MS.gene60327:intron 35.0%
! TTTGTTATGTTATGGTGGCA+GGG - chr8.2:18920162-18920181 MS.gene60327:intron 35.0%
!! AAGACCCAACTCTTTTAACT+TGG - chr8.2:18920913-18920932 MS.gene60327:CDS 35.0%
!! GAGAATGTAGTTGATAGAGA+TGG + chr8.2:18921525-18921544 None:intergenic 35.0%
!! TTTTGTTATGTTATGGTGGC+AGG - chr8.2:18920161-18920180 MS.gene60327:intron 35.0%
AATTCATATCCTGTCATCCC+CGG + chr8.2:18920225-18920244 None:intergenic 40.0%
GTTAAAAGAGTTGGGTCTTC+AGG + chr8.2:18920912-18920931 None:intergenic 40.0%
TACGATTGATAAGGTTGCCA+AGG + chr8.2:18921006-18921025 None:intergenic 40.0%
TATCATGAGAGGTGAAGTGA+AGG - chr8.2:18921449-18921468 MS.gene60327:intron 40.0%
TGAAGTGATTGTAGAGATGC+AGG - chr8.2:18920780-18920799 MS.gene60327:intron 40.0%
TGTCGAAAGTTGTTCTTGCT+AGG + chr8.2:18921278-18921297 None:intergenic 40.0%
TTTACTTTCTATGCTGTGGG+TGG - chr8.2:18921300-18921319 MS.gene60327:CDS 40.0%
! ACTAATTTGCAGGTGTTTGG+AGG - chr8.2:18921362-18921381 MS.gene60327:intron 40.0%
! GATTTTCCGGTCGAATTTGA+CGG - chr8.2:18919736-18919755 MS.gene60327:CDS 40.0%
!! AATGACGGATTATTCCATGC+CGG - chr8.2:18920203-18920222 MS.gene60327:intron 40.0%
!! AGCAGGAGTCTTCTGTTTTT+AGG - chr8.2:18920403-18920422 MS.gene60327:intron 40.0%
!!! AGCTCTTCAGTTTTTGGGAT+TGG - chr8.2:18920034-18920053 MS.gene60327:intron 40.0%
!!! CTTCAGTTTTTGGGATTGGA+TGG - chr8.2:18920038-18920057 MS.gene60327:intron 40.0%
!!! GCAGGAGTCTTCTGTTTTTA+GGG - chr8.2:18920404-18920423 MS.gene60327:intron 40.0%
!!! TGTTTTTAGGGAGATTCCAG+TGG - chr8.2:18920416-18920435 MS.gene60327:intron 40.0%
AGAAGCAGGACAGGATATAC+TGG + chr8.2:18921326-18921345 None:intergenic 45.0%
ATGAGAGGTGAAGTGAAGGA+TGG - chr8.2:18921453-18921472 MS.gene60327:intron 45.0%
ATTTGCAGGTGTTTGGAGGA+AGG - chr8.2:18921366-18921385 MS.gene60327:intron 45.0%
CATGGCAAACACAGATCCTA+TGG + chr8.2:18920726-18920745 None:intergenic 45.0%
GATGGAGAGAACAGTGATGT+TGG - chr8.2:18920056-18920075 MS.gene60327:intron 45.0%
GGATCACATGAATGACGCAT+TGG + chr8.2:18921549-18921568 None:intergenic 45.0%
GTCGAATTTGACGGAGTTGA+TGG - chr8.2:18919745-18919764 MS.gene60327:CDS 45.0%
TCAACTCCGTCAAATTCGAC+CGG + chr8.2:18919745-18919764 None:intergenic 45.0%
TTGATGGAGGAATCACCTTC+AGG - chr8.2:18919761-18919780 MS.gene60327:CDS 45.0%
! TGGCAAGAATCTTTTAGGCC+TGG - chr8.2:18921107-18921126 MS.gene60327:CDS 45.0%
!! ATGACGGATTATTCCATGCC+GGG - chr8.2:18920204-18920223 MS.gene60327:intron 45.0%
!! GAATTTGACGGAGTTGATGG+AGG - chr8.2:18919748-18919767 MS.gene60327:CDS 45.0%
!! GATAATGTTGATGGCGAGAG+TGG + chr8.2:18921591-18921610 None:intergenic 45.0%
!!! TTTATTTTGAAATTTTATAT+TGG - chr8.2:18920336-18920355 MS.gene60327:intron 5.0%
AGTGGTGAGAACACTGACGA+TGG + chr8.2:18921573-18921592 None:intergenic 50.0%
ATTCGACCGGAAAATCTCGC+CGG + chr8.2:18919732-18919751 None:intergenic 50.0%
GTTGGGTCTTCAGGGAAATC+TGG + chr8.2:18920903-18920922 None:intergenic 50.0%
TCCAGTGGTGATCATGTCGT+CGG - chr8.2:18920431-18920450 MS.gene60327:intron 50.0%
TGCAATTCACCTGCACCTGA+AGG + chr8.2:18919779-18919798 None:intergenic 50.0%
!! TGACGGATTATTCCATGCCG+GGG - chr8.2:18920205-18920224 MS.gene60327:intron 50.0%
ATATCCTGTCATCCCCGGCA+TGG + chr8.2:18920220-18920239 None:intergenic 55.0%
ATCGGTAGAAGGTTGCTGCC+AGG + chr8.2:18921128-18921147 None:intergenic 55.0%
GAGGAATCACCTTCAGGTGC+AGG - chr8.2:18919767-18919786 MS.gene60327:CDS 55.0%
GGTGAGAACACTGACGATGG+TGG + chr8.2:18921570-18921589 None:intergenic 55.0%
GTGTTTGGAGGAAGGAGCAG+AGG - chr8.2:18921374-18921393 MS.gene60327:intron 55.0%
GTTATGGTGGCAGGGTGTGA+AGG - chr8.2:18920170-18920189 MS.gene60327:intron 55.0%
TATTCCATGCCGGGGATGAC+AGG - chr8.2:18920213-18920232 MS.gene60327:intron 55.0%
TCCGACGACATGATCACCAC+TGG + chr8.2:18920435-18920454 None:intergenic 55.0%
CGACCGGAAAATCTCGCCGG+CGG + chr8.2:18919729-18919748 None:intergenic 65.0%
! CTGCCGCCGGCGAGATTTTC+CGG - chr8.2:18919723-18919742 MS.gene60327:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 18919719 18921632 18919719 ID=MS.gene60327
chr8.2 mRNA 18919719 18921632 18919719 ID=MS.gene60327.t1;Parent=MS.gene60327
chr8.2 exon 18921506 18921632 18921506 ID=MS.gene60327.t1.exon1;Parent=MS.gene60327.t1
chr8.2 CDS 18921506 18921632 18921506 ID=cds.MS.gene60327.t1;Parent=MS.gene60327.t1
chr8.2 exon 18921266 18921342 18921266 ID=MS.gene60327.t1.exon2;Parent=MS.gene60327.t1
chr8.2 CDS 18921266 18921342 18921266 ID=cds.MS.gene60327.t1;Parent=MS.gene60327.t1
chr8.2 exon 18921091 18921168 18921091 ID=MS.gene60327.t1.exon3;Parent=MS.gene60327.t1
chr8.2 CDS 18921091 18921168 18921091 ID=cds.MS.gene60327.t1;Parent=MS.gene60327.t1
chr8.2 exon 18920873 18920943 18920873 ID=MS.gene60327.t1.exon4;Parent=MS.gene60327.t1
chr8.2 CDS 18920873 18920943 18920873 ID=cds.MS.gene60327.t1;Parent=MS.gene60327.t1
chr8.2 exon 18919719 18919977 18919719 ID=MS.gene60327.t1.exon5;Parent=MS.gene60327.t1
chr8.2 CDS 18919719 18919977 18919719 ID=cds.MS.gene60327.t1;Parent=MS.gene60327.t1
Gene Sequence

>MS.gene60327

ATGGCTGCCGCCGGCGAGATTTTCCGGTCGAATTTGACGGAGTTGATGGAGGAATCACCTTCAGGTGCAGGTGAATTGCATGTGCTTGCTGTTGATGATAGTCTTGTTGATCGTAAAGTGATTGAACGTTTGTTGAAGATTTCTTCATGCAAAGGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATGATGACAATTGACACAGCATACTGAATTTTCATGTGTTTATGAATTGATTTTGAAAATGTTTTTGGAATTTGTTTTTTTGTTTCAGTTACGGTTGTTGAGAGTGCAAGAAGAGCTCTTCAGTTTTTGGGATTGGATGGAGAGAACAGTGATGTTGGATTTGATGTAAGCAAATTATGTTTCTGGATTATTAACTTTGCTTGGATGTTAATTTGGAATTTGTTGATGTTTATGTTGTTGTTTTGTTATGTTATGGTGGCAGGGTGTGAAGGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGGTGATTAATTAATTATTGGTTGTTGATGAATTTCCTTATTTGAATTGTTGATAGTTGAATTTTATTGTTGTAAAATTTATTTTGAAATTTTATATTGGAGGAAGGTGGTTCTTATTATTCTCTACCTGTTTGTGTTAATTTCAGCAGGAGTCTTCTGTTTTTAGGGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGGTAAGAAATTGAATGAATTACGTCTCTTTTGATTCTAGTGTGATTTGGATGGTGAATAACATGTGTATTTGGTAATTAAATGATGAATCACATCTAGTTAAGTTCCTACTGAATTCTAATCTGGTGTTCTTTTAATCTTTCCCATAAATATGCATCTAATCTGCCACTTAATCAGGAAATAAATTCATTGTGTAGATCCCAAATAGATATGGAGGCATAAGTATTAAGTTTAACTGTTGAAGCTCCATAGGATCTGTGTTTGCCATGCTACTTAAGTTTATTTGTTAACACTAAGAACGGATGAAGTGATTGTAGAGATGCAGGCTTCTCTGAAATTTGTGTTTCAAATCACTCAGATAGGGTTTTAAAAACAGTGACAAAGCACTAAACTACTTTTCGCAGAATTTCCAAATTAAGTTCTCCAGATTTCCCTGAAGACCCAACTCTTTTAACTTGGATCAGTTTTTTTTTATTTTATTTTTTATTTTATTGGAACTCGAATAAGTTTATGGTGTTATTTGTTTCCTTGGCAACCTTATCAATCGTATGAAAACATTTAATCGTTAGACAAAGTTGATTGAAAAACAACAAACCAAAAAAATAAAAAGAAACAAATAAAAGGAATATTTGGCAAGAATCTTTTAGGCCTGGCAGCAACCTTCTACCGATGTAATTGTAATTGCCACACGGTTCTACATATTATTGACAACCCAAAAGAATATGTACATTTGTATTATATGGAGTGCTTTAGGTGATATAAATCTAAATTTATCAAATCATTGCAACAAATTCTCTACCTAGCAAGAACAACTTTCGACACATTTACTTTCTATGCTGTGGGTGGCCAGTATATCCTGTCCTGCTTCTTAATAGTTTTATTTTCACTAATTTGCAGGTGTTTGGAGGAAGGAGCAGAGGATTTTTTGTTGAAGCCAGTCAAATTGTCAGATGTAAGACGCCTGAAAGATTTTATCATGAGAGGTGAAGTGAAGGATGGTGAGAAATGTTCTCTCAAAAGAATGCGATCATCAGATGATTGTAGTCCATCTCTATCAACTACATTCTCACCAATGCGTCATTCATGTGATCCACCATCGTCAGTGTTCTCACCACTCTCGCCATCAACATTATCCTCTAAGAAATCAAGATTATGA
Protein sequence

>MS.gene60327.t1

MAAAGEIFRSNLTELMEESPSGAGELHVLAVDDSLVDRKVIELTVVESARRALQFLGLDGENSDVGFDGVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKDGEKCSLKRMRSSDDCSPSLSTTFSPMRHSCDPPSSVFSPLSPSTLSSKKSRL