AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60769

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60769.t1 MTR_1g097090 96.849 476 15 0 1 476 1 476 0.0 961
MS.gene60769.t1 MTR_1g097090 96.835 474 15 0 1 474 1 474 0.0 954
MS.gene60769.t1 MTR_4g084200 36.574 432 216 11 54 476 91 473 6.34e-84 267
MS.gene60769.t1 MTR_4g084200 36.314 369 194 8 54 416 91 424 8.00e-73 236
MS.gene60769.t1 MTR_4g084200 37.465 355 181 8 54 402 91 410 1.96e-72 235
MS.gene60769.t1 MTR_3g085480 33.925 451 244 11 19 462 13 416 8.44e-71 231
MS.gene60769.t1 MTR_8g080490 33.913 460 234 12 18 462 10 414 9.74e-71 231
MS.gene60769.t1 MTR_4g077920 34.247 438 221 9 50 475 107 489 9.65e-70 230
MS.gene60769.t1 MTR_4g077920 34.963 409 199 9 50 446 107 460 9.30e-68 224
MS.gene60769.t1 MTR_3g037720 33.803 426 220 11 50 462 110 486 5.67e-65 218
MS.gene60769.t1 MTR_6g027310 33.803 426 220 14 55 467 113 489 1.46e-63 214
MS.gene60769.t1 MTR_7g087100 32.609 414 230 11 55 462 116 486 9.53e-59 202
MS.gene60769.t1 MTR_4g077920 38.206 301 157 5 182 475 153 431 5.01e-57 195
MS.gene60769.t1 MTR_8g080490 30.938 320 156 12 18 322 10 279 1.90e-26 109
MS.gene60769.t1 MTR_3g110200 24.623 398 230 14 51 424 216 567 4.57e-17 84.3
MS.gene60769.t1 MTR_4g115540 29.329 283 173 9 145 423 340 599 5.16e-17 84.3
MS.gene60769.t1 MTR_3g110198 25.472 318 188 10 115 422 290 568 1.39e-14 76.6
MS.gene60769.t1 MTR_7g103150 26.316 323 179 14 115 422 181 459 2.15e-14 75.9
MS.gene60769.t1 MTR_1g006600 25.234 321 187 11 115 423 283 562 2.74e-14 75.5
MS.gene60769.t1 MTR_2g084245 27.703 296 152 12 139 405 131 393 2.15e-13 72.4
MS.gene60769.t1 MTR_4g115460 25.159 314 201 9 116 423 152 437 2.98e-13 72.0
MS.gene60769.t1 MTR_4g057500 25.979 281 146 8 139 390 149 396 3.04e-13 72.0
MS.gene60769.t1 MTR_8g096140 26.132 287 167 9 195 463 142 401 3.62e-13 71.6
MS.gene60769.t1 MTR_1g029350 24.742 291 189 9 139 422 124 391 6.23e-13 70.9
MS.gene60769.t1 MTR_4g100730 25.000 324 211 9 105 423 215 511 3.71e-12 68.9
MS.gene60769.t1 MTR_8g096160 25.087 287 170 9 195 463 142 401 3.83e-12 68.6
MS.gene60769.t1 MTR_5g031480 25.157 318 182 14 127 424 110 391 8.75e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60769.t1 AT1G34270 71.767 464 126 3 14 475 16 476 0.0 697
MS.gene60769.t1 AT5G44930 33.129 489 248 10 4 475 5 431 6.01e-77 248
MS.gene60769.t1 AT5G44930 33.129 489 248 10 4 475 5 431 6.01e-77 248
MS.gene60769.t1 AT2G35100 33.953 430 231 8 50 475 55 435 2.66e-74 241
MS.gene60769.t1 AT1G67410 32.479 468 247 11 14 462 5 422 2.16e-72 235
MS.gene60769.t1 AT3G45400 34.709 412 225 8 55 462 81 452 4.43e-68 225
MS.gene60769.t1 AT5G44930 34.140 413 203 9 4 399 5 365 3.25e-67 221
MS.gene60769.t1 AT5G16890 33.560 441 220 9 50 475 113 495 2.48e-66 222
MS.gene60769.t1 AT1G74680 33.494 415 228 12 55 462 75 448 3.17e-64 215
MS.gene60769.t1 AT3G03650 33.571 420 235 8 48 462 114 494 3.65e-63 213
MS.gene60769.t1 AT1G67410 28.037 321 169 11 14 315 5 282 1.06e-25 107
MS.gene60769.t1 AT4G32790 25.153 326 201 12 105 422 278 568 5.39e-15 77.8
MS.gene60769.t1 AT4G32790 25.153 326 201 12 105 422 278 568 5.39e-15 77.8
MS.gene60769.t1 AT4G32790 25.153 326 201 12 105 422 278 568 5.39e-15 77.8
MS.gene60769.t1 AT1G21480 24.490 294 186 9 139 422 139 406 2.79e-13 72.0
MS.gene60769.t1 AT5G20260 26.538 260 163 7 169 421 68 306 3.75e-13 70.9
MS.gene60769.t1 AT5G20260 26.538 260 163 7 169 421 95 333 4.98e-13 70.9
MS.gene60769.t1 AT1G63450 25.159 314 185 13 139 427 352 640 8.13e-13 71.2
MS.gene60769.t1 AT5G20260 26.336 262 165 7 169 423 200 440 8.71e-13 70.5
MS.gene60769.t1 AT1G21480 25.600 250 158 7 139 381 139 367 1.07e-12 70.1
MS.gene60769.t1 AT5G33290 27.070 314 179 14 90 386 159 439 1.14e-12 70.5
MS.gene60769.t1 AT5G19670 24.916 297 171 12 105 387 292 550 2.22e-12 69.7
MS.gene60769.t1 AT5G19670 24.916 297 171 12 105 387 292 550 2.22e-12 69.7
MS.gene60769.t1 AT5G61840 23.837 344 208 12 139 463 92 400 6.31e-12 67.8
MS.gene60769.t1 AT2G28110 25.000 280 170 7 139 400 138 395 6.72e-12 67.8
MS.gene60769.t1 AT1G27440 26.644 289 163 10 195 463 138 397 8.44e-12 67.4
MS.gene60769.t1 AT4G16745 28.495 186 115 5 278 452 367 545 1.96e-11 66.6

Find 134 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCCTTGTTGTGGATTT+TGG 0.144950 1.2:+71687561 MS.gene60769:CDS
GCACTGTACTGTTTGATAAT+TGG 0.173216 1.2:-71686449 None:intergenic
AAATTCTAAGGCTTTGCTTT+TGG 0.266168 1.2:-71686399 None:intergenic
GGAGCATTGTTGTTGTTCTT+TGG 0.294723 1.2:-71686134 None:intergenic
TGGAAATTCAGTAAATTCTA+AGG 0.317464 1.2:-71686411 None:intergenic
TACTGGGTCGTTTGCAAAAC+GGG 0.327155 1.2:+71686517 MS.gene60769:CDS
TGCTCTCGCCCAGTCGCATT+AGG 0.349546 1.2:-71689341 None:intergenic
GCTGCACTCGAGCCATGTTT+TGG 0.351102 1.2:-71689619 None:intergenic
TTAACATGCCACATTGCAAC+TGG 0.357968 1.2:-71687519 None:intergenic
ATCAACGTCGCTGCCGATTC+GGG 0.363149 1.2:-71686363 None:intergenic
GTCTATGATAATGGTCATTC+GGG 0.367182 1.2:+71689650 MS.gene60769:CDS
GATCAACGTCGCTGCCGATT+CGG 0.373254 1.2:-71686364 None:intergenic
CATTTCAGACGAGGTACAAT+TGG 0.375849 1.2:-71687613 None:intergenic
ATGTTGTCGCTGACAATAAC+AGG 0.381177 1.2:-71689464 None:intergenic
CCCATGTTTGTCTATGATAA+TGG 0.401139 1.2:+71689641 MS.gene60769:CDS
GAAGAACGTGAGAGAGAGAA+TGG 0.404972 1.2:-71686198 None:intergenic
TAGTCCACTGTACCTTCAAA+TGG 0.405969 1.2:-71689494 None:intergenic
TATGAGTGCTGAATTGCAAT+TGG 0.410092 1.2:+71686589 MS.gene60769:CDS
CACCGACGAAATTGCGTACT+GGG 0.413292 1.2:+71686501 MS.gene60769:CDS
TGTCTATGATAATGGTCATT+CGG 0.417721 1.2:+71689649 MS.gene60769:CDS
GTCGCTGCCGATTCGGGAAT+CGG 0.417806 1.2:-71686357 None:intergenic
AAGAGTGTGGGAATGGAGAA+TGG 0.418682 1.2:-71686155 None:intergenic
ACGAAAGCATGGAATCGTTC+TGG 0.418714 1.2:+71686695 MS.gene60769:CDS
TAGGAAGAAGGTTGGGAATG+AGG 0.424813 1.2:+71686631 MS.gene60769:CDS
AATGGTCATTCGGGTGGTAT+TGG 0.426651 1.2:+71689659 MS.gene60769:CDS
GAAGAGAAAGAGTGTGGGAA+TGG 0.433432 1.2:-71686162 None:intergenic
GCTCTCGCCCAGTCGCATTA+GGG 0.433894 1.2:-71689340 None:intergenic
TTGTTGTTGTTCTTTGGAAT+TGG 0.440569 1.2:-71686128 None:intergenic
AACAGTACAGTGCGGAGTAT+TGG 0.445349 1.2:+71686459 MS.gene60769:CDS
TTCACCTCCGATTCCCGAAT+CGG 0.447889 1.2:+71686350 MS.gene60769:CDS
GTGTGTCCCCAGCCGGATGC+AGG 0.448189 1.2:-71689397 None:intergenic
GAGTGAAGAGTGTGTGGTGG+TGG 0.454997 1.2:-71686237 None:intergenic
GAGGGCGTAATTGAGGGATC+TGG 0.456584 1.2:-71686309 None:intergenic
AACATAGAGCTCCCATTTGA+AGG 0.457084 1.2:+71689482 MS.gene60769:CDS
CAGTGCGGAGTATTGGATCA+TGG 0.459205 1.2:+71686466 MS.gene60769:CDS
TACTGAATTTCCACCATACC+CGG 0.464849 1.2:+71686421 MS.gene60769:CDS
TGCAATTGGGTATGGCGAAA+GGG 0.465853 1.2:+71686603 MS.gene60769:CDS
TGAAGGACCAGTAGCGGTTG+AGG 0.466031 1.2:-71686331 None:intergenic
ACGCCCTCCTCAACCGCTAC+TGG 0.470670 1.2:+71686324 MS.gene60769:CDS
CCCGGCCATTCTCCTTGTTG+TGG 0.473519 1.2:+71687554 MS.gene60769:CDS
GAAGGCTTCCCTAATGCGAC+TGG 0.476447 1.2:+71689332 MS.gene60769:CDS
ACTGACCCGGTGCCGATGCT+TGG 0.477951 1.2:-71687754 None:intergenic
GATCATGTGTTTGTTGTCAC+TGG 0.480706 1.2:+71686725 MS.gene60769:CDS
TCCACAACAAGGAGAATGGC+CGG 0.488926 1.2:-71687555 None:intergenic
TAATGAGCCCGGTGTAATCA+TGG 0.490173 1.2:+71689307 MS.gene60769:CDS
AGGTATGCAAAGACTTTGAA+TGG 0.492570 1.2:-71689444 None:intergenic
ACACCGACGAAATTGCGTAC+TGG 0.493490 1.2:+71686500 MS.gene60769:CDS
GCCTAGTTAGAGAGAAGTTG+TGG 0.494386 1.2:+71689273 MS.gene60769:CDS
AGCCGGATGCAGGCAAAACT+CGG 0.495250 1.2:-71689387 None:intergenic
AGAGTGTGTGGTGGTGGTGT+AGG 0.496187 1.2:-71686231 None:intergenic
TCTCTTCAACCAACCACCTC+CGG 0.496354 1.2:+71686260 MS.gene60769:CDS
AGGGCGTAATTGAGGGATCT+GGG 0.496468 1.2:-71686308 None:intergenic
AAGGAGCCAAGCATCGGCAC+CGG 0.501263 1.2:+71687748 MS.gene60769:CDS
GGTTGAGGAGGGCGTAATTG+AGG 0.509284 1.2:-71686316 None:intergenic
GTTGAGGAGGGCGTAATTGA+GGG 0.509369 1.2:-71686315 None:intergenic
TTACAGAAACTTGAGTGTGT+TGG 0.510748 1.2:-71687638 None:intergenic
ATGGTGCAGTGAATCATATA+TGG 0.511995 1.2:+71689696 MS.gene60769:CDS
GTACTGGGTCGTTTGCAAAA+CGG 0.515407 1.2:+71686516 MS.gene60769:CDS
CACAACCTTCTCTATTTCAA+AGG 0.517809 1.2:+71687729 MS.gene60769:CDS
AAAATCCACAACAAGGAGAA+TGG 0.518213 1.2:-71687559 None:intergenic
GGGCGTAATTGAGGGATCTG+GGG 0.522832 1.2:-71686307 None:intergenic
AGTGCGGAGTATTGGATCAT+GGG 0.524351 1.2:+71686467 MS.gene60769:CDS
TTGCAATTGGGTATGGCGAA+AGG 0.524843 1.2:+71686602 MS.gene60769:CDS
ATGAGGATTATCAGAGGCAG+AGG 0.530227 1.2:+71686648 MS.gene60769:CDS
CCCACAACTTCTCTCTAACT+AGG 0.532666 1.2:-71689274 None:intergenic
TGGTATTGGCCCTGTACCTA+TGG 0.536105 1.2:+71689673 MS.gene60769:CDS
CCACAACAAGGAGAATGGCC+GGG 0.537997 1.2:-71687554 None:intergenic
GTGTGTGGTGGTGGTGTAGG+AGG 0.538288 1.2:-71686228 None:intergenic
ACTGCACCATCCATAGGTAC+AGG 0.542217 1.2:-71689683 None:intergenic
GGGCGAGAGCAATCAATACA+AGG 0.544501 1.2:+71689353 MS.gene60769:CDS
AAGAAAACCACCGGGTGTGT+TGG 0.547239 1.2:+71689772 MS.gene60769:CDS
GGACCAGTAGCGGTTGAGGA+GGG 0.548816 1.2:-71686327 None:intergenic
AGGAGCCAAGCATCGGCACC+GGG 0.549166 1.2:+71687749 MS.gene60769:CDS
GTGATGCACTTAAACCAAGC+TGG 0.550784 1.2:+71689546 MS.gene60769:CDS
GATTCGGGAATCGGAGGTGA+AGG 0.555168 1.2:-71686348 None:intergenic
AGTCCACTGTACCTTCAAAT+GGG 0.555585 1.2:-71689493 None:intergenic
ATTGAGGGATCTGGGGAGGT+CGG 0.558091 1.2:-71686300 None:intergenic
CACAACAAGGAGAATGGCCG+GGG 0.558397 1.2:-71687553 None:intergenic
GAAGTGGGTGTGTCCCCAGC+CGG 0.560502 1.2:-71689404 None:intergenic
TGGCTCCTTTGAAATAGAGA+AGG 0.560562 1.2:-71687734 None:intergenic
AGATGATTGACTATCCAGCT+TGG 0.562713 1.2:-71689560 None:intergenic
TCGAGAGAAAAGAAAACCAC+CGG 0.564673 1.2:+71689763 MS.gene60769:CDS
TGCTGAATTGCAATTGGGTA+TGG 0.567949 1.2:+71686595 MS.gene60769:CDS
TTGTGAAGAAAACGAAAGCA+TGG 0.572498 1.2:+71686684 MS.gene60769:CDS
ATGAGTGCTGAATTGCAATT+GGG 0.572561 1.2:+71686590 MS.gene60769:CDS
CGGGGTAGAAGATGTGTGTA+CGG 0.572897 1.2:-71687678 None:intergenic
CCTTCCTCCATGATTACACC+GGG 0.575893 1.2:-71689314 None:intergenic
CCTAGTTAGAGAGAAGTTGT+GGG 0.578078 1.2:+71689274 MS.gene60769:CDS
GCAATTGGGTATGGCGAAAG+GGG 0.581075 1.2:+71686604 MS.gene60769:CDS
AAGAGAGAGTGAAGAGTGTG+TGG 0.582928 1.2:-71686243 None:intergenic
GTAGACGTTGATGCCGGAGG+TGG 0.584831 1.2:-71686273 None:intergenic
ATTGGCCCTGTACCTATGGA+TGG 0.585292 1.2:+71689677 MS.gene60769:CDS
TAACATGCCACATTGCAACT+GGG 0.588615 1.2:-71687518 None:intergenic
GCCTTCCTCCATGATTACAC+CGG 0.589678 1.2:-71689315 None:intergenic
ATGAAGAAGAGAAAGAGTGT+GGG 0.590582 1.2:-71686167 None:intergenic
TGATTCACTGCACCATCCAT+AGG 0.590916 1.2:-71689689 None:intergenic
AGACACGTTCCGCCAAAACA+TGG 0.591709 1.2:+71689607 MS.gene60769:CDS
ACGTTGATGCCGGAGGTGGT+TGG 0.592173 1.2:-71686269 None:intergenic
GATGAAGAAGAGAAAGAGTG+TGG 0.598357 1.2:-71686168 None:intergenic
AAAGCATGGAATCGTTCTGG+TGG 0.600089 1.2:+71686698 MS.gene60769:CDS
AGAGAGTGAAGAGTGTGTGG+TGG 0.602159 1.2:-71686240 None:intergenic
GGCGACGTAGACGTTGATGC+CGG 0.610952 1.2:-71686279 None:intergenic
ATTTCAAAGGAGCCAAGCAT+CGG 0.613834 1.2:+71687742 MS.gene60769:CDS
CCATTATCATAGACAAACAT+GGG 0.615762 1.2:-71689641 None:intergenic
CCCGGTGTAATCATGGAGGA+AGG 0.618450 1.2:+71689314 MS.gene60769:CDS
AGGACCAGTAGCGGTTGAGG+AGG 0.619629 1.2:-71686328 None:intergenic
CGGAGGTGAAGGACCAGTAG+CGG 0.620085 1.2:-71686337 None:intergenic
CGTAATTGAGGGATCTGGGG+AGG 0.621892 1.2:-71686304 None:intergenic
GTGCGGAGTATTGGATCATG+GGG 0.622157 1.2:+71686468 MS.gene60769:CDS
CGTCGTGGAACCAACACACC+CGG 0.623417 1.2:-71689782 None:intergenic
ACCATTATCATAGACAAACA+TGG 0.626090 1.2:-71689642 None:intergenic
TGTTAAAGATGAGATTGCCC+CGG 0.630173 1.2:+71687536 MS.gene60769:CDS
AAGGCTTCCCTAATGCGACT+GGG 0.630631 1.2:+71689333 MS.gene60769:CDS
GATCTATTGAATAATGAGCC+CGG 0.632256 1.2:+71689296 MS.gene60769:CDS
CTGCACCATCCATAGGTACA+GGG 0.632850 1.2:-71689682 None:intergenic
TAAGTACATTGACATCGTCG+TGG 0.634589 1.2:-71689797 None:intergenic
TATGATAATGGTCATTCGGG+TGG 0.635201 1.2:+71689653 MS.gene60769:CDS
AAGCATGGAATCGTTCTGGT+GGG 0.635217 1.2:+71686699 MS.gene60769:CDS
CGAGAGAAAAGAAAACCACC+GGG 0.637673 1.2:+71689764 MS.gene60769:CDS
GCTGCCGATTCGGGAATCGG+AGG 0.653431 1.2:-71686354 None:intergenic
GGCGAGAGCAATCAATACAA+GGG 0.664455 1.2:+71689354 MS.gene60769:CDS
GCTCCCATTTGAAGGTACAG+TGG 0.671438 1.2:+71689490 MS.gene60769:CDS
GGATTATCAGAGGCAGAGGG+AGG 0.675305 1.2:+71686652 MS.gene60769:CDS
GACGTAGACGTTGATGCCGG+AGG 0.678769 1.2:-71686276 None:intergenic
GACCCAGTACGCAATTTCGT+CGG 0.680627 1.2:-71686503 None:intergenic
TGAGGATTATCAGAGGCAGA+GGG 0.682411 1.2:+71686649 MS.gene60769:CDS
GTGTTGGATCATTTCAGACG+AGG 0.688231 1.2:-71687622 None:intergenic
ACCCACCAAAATCCACAACA+AGG 0.701202 1.2:-71687566 None:intergenic
TTGGGAATGAGGATTATCAG+AGG 0.702859 1.2:+71686642 MS.gene60769:CDS
CGTGGAACCAACACACCCGG+TGG 0.714825 1.2:-71689779 None:intergenic
TGGCAGACCCAGTTGCAATG+TGG 0.723564 1.2:+71687511 MS.gene60769:intron
TGAGCCCGGTGTAATCATGG+AGG 0.740721 1.2:+71689310 MS.gene60769:CDS
AATTATCAAACAGTACAGTG+CGG 0.765872 1.2:+71686451 MS.gene60769:CDS
TGCGGAGTATTGGATCATGG+GGG 0.774007 1.2:+71686469 MS.gene60769:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATAATTATATCAATC+TGG + chr1.2:71688306-71688325 MS.gene60769:intron 15.0%
!! AGTTATAATTATATCAATCT+GGG + chr1.2:71688307-71688326 MS.gene60769:intron 15.0%
!! ATAATTAAACATTATAGGAT+TGG - chr1.2:71689143-71689162 None:intergenic 15.0%
!! ATTCCATTAAGTAAATTTAA+AGG - chr1.2:71688907-71688926 None:intergenic 15.0%
!! TTTAAGTGATCAAATTTATT+GGG + chr1.2:71687884-71687903 MS.gene60769:intron 15.0%
!!! ATTTTCAAATTTTAAACCAA+CGG - chr1.2:71688133-71688152 None:intergenic 15.0%
!!! TTTTAAGTGATCAAATTTAT+TGG + chr1.2:71687883-71687902 MS.gene60769:intron 15.0%
!! AACATATGAACATAACATTT+GGG - chr1.2:71687318-71687337 None:intergenic 20.0%
!! ACTATGTTAGTAATATATTG+AGG + chr1.2:71688871-71688890 MS.gene60769:intron 20.0%
!! ATAGATGCAAAAATTTATGT+AGG + chr1.2:71689166-71689185 MS.gene60769:intron 20.0%
!! GAAAAATTGTTCAAATTACA+GGG + chr1.2:71689248-71689267 MS.gene60769:intron 20.0%
!! TGAAAAATTGTTCAAATTAC+AGG + chr1.2:71689247-71689266 MS.gene60769:intron 20.0%
!! TGACCTTTAAATTTACTTAA+TGG + chr1.2:71688901-71688920 MS.gene60769:intron 20.0%
!! TGATATAATTATAACTTCCT+GGG - chr1.2:71688303-71688322 None:intergenic 20.0%
!! TTGATATAATTATAACTTCC+TGG - chr1.2:71688304-71688323 None:intergenic 20.0%
!!! ATTTTTCAGTAAGATTAACA+TGG - chr1.2:71689235-71689254 None:intergenic 20.0%
!!! CATCTTTTATGACTTATAAT+TGG + chr1.2:71687840-71687859 MS.gene60769:intron 20.0%
!!! TACTAGTGCTTTTTTTTTTT+TGG + chr1.2:71688558-71688577 MS.gene60769:intron 20.0%
!!! TTATTGCTTTTTCATGTTTA+AGG + chr1.2:71688954-71688973 MS.gene60769:intron 20.0%
!!! TTTTCAAATTTTAAACCAAC+GGG - chr1.2:71688132-71688151 None:intergenic 20.0%
! AAACACGTATATGATAAACA+AGG - chr1.2:71686848-71686867 None:intergenic 25.0%
! AACACGTATATGATAAACAA+GGG - chr1.2:71686847-71686866 None:intergenic 25.0%
! AATTTGATCACTTAAAACCA+TGG - chr1.2:71687880-71687899 None:intergenic 25.0%
! ACATATGAACATAACATTTG+GGG - chr1.2:71687317-71687336 None:intergenic 25.0%
! ATAAGAGTGATTGAATAGTT+AGG - chr1.2:71688108-71688127 None:intergenic 25.0%
! CAACATATGAACATAACATT+TGG - chr1.2:71687319-71687338 None:intergenic 25.0%
! CACTAATACACTATAATCAA+TGG - chr1.2:71688212-71688231 None:intergenic 25.0%
! GATATAATTATAACTTCCTG+GGG - chr1.2:71688302-71688321 None:intergenic 25.0%
! GTTACTCTTTACAAAAGTAA+TGG + chr1.2:71688580-71688599 MS.gene60769:intron 25.0%
! GTTAGTAATATATTGAGGAT+TGG + chr1.2:71688876-71688895 MS.gene60769:intron 25.0%
! GTTTATCATATACGTGTTTA+TGG + chr1.2:71686849-71686868 MS.gene60769:intron 25.0%
! TGGAAATTCAGTAAATTCTA+AGG - chr1.2:71686414-71686433 None:intergenic 25.0%
! TTACAAAAGTAATGGTTCAA+AGG + chr1.2:71688588-71688607 MS.gene60769:intron 25.0%
!! AAGTGATGATTTTTATCTAG+TGG - chr1.2:71688185-71688204 None:intergenic 25.0%
!! TTTTCAATGTTATAAGTGTG+TGG + chr1.2:71688400-71688419 MS.gene60769:intron 25.0%
!! TTTTCTTTTCTCTCGAATTA+TGG - chr1.2:71689759-71689778 None:intergenic 25.0%
!!! AAAAAAGCACTAGTAAACAT+CGG - chr1.2:71688553-71688572 None:intergenic 25.0%
!!! AACTTGTTTTGTTACTGTTA+TGG + chr1.2:71686779-71686798 MS.gene60769:intron 25.0%
!!! AATAGTTAGGCTTTTGTTTT+GGG - chr1.2:71688095-71688114 None:intergenic 25.0%
!!! ACCTTACTTTTTAACATTAC+AGG + chr1.2:71688477-71688496 MS.gene60769:intron 25.0%
!!! ATAAGCTATTTCTACAACAA+AGG + chr1.2:71686872-71686891 MS.gene60769:intron 25.0%
!!! ATTCTAGAACATAATGTTGA+TGG + chr1.2:71689009-71689028 MS.gene60769:intron 25.0%
!!! CCTTACTTTTTAACATTACA+GGG + chr1.2:71688478-71688497 MS.gene60769:intron 25.0%
!!! CTGTTATGGTTTTGAATTTT+TGG + chr1.2:71686793-71686812 MS.gene60769:intron 25.0%
!!! TGTTTGATAATTGGATTTTC+CGG - chr1.2:71686443-71686462 None:intergenic 25.0%
AAAAAGAAACAATACTGACC+CGG - chr1.2:71687770-71687789 None:intergenic 30.0%
AAATTGTTCAAATTACAGGG+AGG + chr1.2:71689251-71689270 MS.gene60769:intron 30.0%
AATTATCAAACAGTACAGTG+CGG + chr1.2:71686451-71686470 MS.gene60769:CDS 30.0%
ACCATTATCATAGACAAACA+TGG - chr1.2:71689645-71689664 None:intergenic 30.0%
ATTAAGCCGAAAACAGTTTA+TGG + chr1.2:71687133-71687152 MS.gene60769:intron 30.0%
CACTACATTAAGTGCTTATT+TGG - chr1.2:71687202-71687221 None:intergenic 30.0%
CATATGAACATAACATTTGG+GGG - chr1.2:71687316-71687335 None:intergenic 30.0%
CCAAAGAGGAGAAAAATAAA+AGG - chr1.2:71689069-71689088 None:intergenic 30.0%
CCATTATCATAGACAAACAT+GGG - chr1.2:71689644-71689663 None:intergenic 30.0%
CCCTGTAATGTTAAAAAGTA+AGG - chr1.2:71688481-71688500 None:intergenic 30.0%
TAAATAGTTGACATCCTTGA+GGG + chr1.2:71689032-71689051 MS.gene60769:intron 30.0%
TATAAGCCCTTATGCTAAAA+GGG - chr1.2:71687023-71687042 None:intergenic 30.0%
TATGTAGGTATTCATCTAAC+AGG + chr1.2:71689181-71689200 MS.gene60769:intron 30.0%
TGCATGTGTGAAAATGTAAA+AGG + chr1.2:71687407-71687426 MS.gene60769:intron 30.0%
TTAAGCTATTTATCCAAGCA+TGG - chr1.2:71686819-71686838 None:intergenic 30.0%
TTATAAGCCCTTATGCTAAA+AGG - chr1.2:71687024-71687043 None:intergenic 30.0%
TTTGAATGGCATCAAAAAGT+CGG - chr1.2:71689433-71689452 None:intergenic 30.0%
! ACATGTCCATAAACTGTTTT+CGG - chr1.2:71687142-71687161 None:intergenic 30.0%
! ACTGTTTTCGTAACTTATCA+TGG + chr1.2:71687098-71687117 MS.gene60769:intron 30.0%
! ATTATGGCTTCTTTTATCGT+TGG - chr1.2:71689743-71689762 None:intergenic 30.0%
! CTGTCATTTAAGAATGTTCA+AGG + chr1.2:71687230-71687249 MS.gene60769:intron 30.0%
! TGTTTTCTGACAAATGCAAA+CGG - chr1.2:71687701-71687720 None:intergenic 30.0%
! TTTTCAGTTTTTGTAGCAGT+TGG + chr1.2:71689524-71689543 MS.gene60769:CDS 30.0%
!! GAATAGTTAGGCTTTTGTTT+TGG - chr1.2:71688096-71688115 None:intergenic 30.0%
!! GTTAAAACTGAAGCATTGTT+TGG + chr1.2:71687491-71687510 MS.gene60769:intron 30.0%
!! GTTGTTTTCGTAAGAATTGT+AGG + chr1.2:71686973-71686992 MS.gene60769:intron 30.0%
!! GTTTGATAATTGGATTTTCC+GGG - chr1.2:71686442-71686461 None:intergenic 30.0%
!! TGTCTATGATAATGGTCATT+CGG + chr1.2:71689649-71689668 MS.gene60769:CDS 30.0%
!! TTGTTGTTGTTCTTTGGAAT+TGG - chr1.2:71686131-71686150 None:intergenic 30.0%
!!! AAATTCTAAGGCTTTGCTTT+TGG - chr1.2:71686402-71686421 None:intergenic 30.0%
!!! CCTTTTATTTTTCTCCTCTT+TGG + chr1.2:71689066-71689085 MS.gene60769:intron 30.0%
AAAATCCACAACAAGGAGAA+TGG - chr1.2:71687562-71687581 None:intergenic 35.0%
AAAGTAATGGTTCAAAGGCT+AGG + chr1.2:71688593-71688612 MS.gene60769:intron 35.0%
AACTTATCATGGAGAGCTTA+TGG + chr1.2:71687109-71687128 MS.gene60769:intron 35.0%
AAGTTTGCAAATTGCAAGCA+CGG - chr1.2:71686764-71686783 None:intergenic 35.0%
ACTTATCATGGAGAGCTTAT+GGG + chr1.2:71687110-71687129 MS.gene60769:intron 35.0%
AGGTATGCAAAGACTTTGAA+TGG - chr1.2:71689447-71689466 None:intergenic 35.0%
ATGGTGCAGTGAATCATATA+TGG + chr1.2:71689696-71689715 MS.gene60769:CDS 35.0%
CACAACCTTCTCTATTTCAA+AGG + chr1.2:71687729-71687748 MS.gene60769:CDS 35.0%
CCAACTATGAGTAATATCAC+AGG - chr1.2:71688157-71688176 None:intergenic 35.0%
CCCATGTTTGTCTATGATAA+TGG + chr1.2:71689641-71689660 MS.gene60769:CDS 35.0%
CCTGTGATATTACTCATAGT+TGG + chr1.2:71688154-71688173 MS.gene60769:intron 35.0%
GACATGTTCAAAAGATTCTC+AGG - chr1.2:71686949-71686968 None:intergenic 35.0%
GAGCATAGTTCCAAAAGAAA+AGG - chr1.2:71687809-71687828 None:intergenic 35.0%
GATCTATTGAATAATGAGCC+CGG + chr1.2:71689296-71689315 MS.gene60769:CDS 35.0%
GCACTCATAGTAGCAAAAAA+CGG - chr1.2:71686578-71686597 None:intergenic 35.0%
GTAAATAGTTGACATCCTTG+AGG + chr1.2:71689031-71689050 MS.gene60769:intron 35.0%
TGTATGCATAGCTGCAATAA+GGG + chr1.2:71687270-71687289 MS.gene60769:intron 35.0%
TGTCAGAAAATCTCAGTTGT+GGG + chr1.2:71687976-71687995 MS.gene60769:intron 35.0%
TTACAGAAACTTGAGTGTGT+TGG - chr1.2:71687641-71687660 None:intergenic 35.0%
TTGTCAGAAAATCTCAGTTG+TGG + chr1.2:71687975-71687994 MS.gene60769:intron 35.0%
TTGTGAAGAAAACGAAAGCA+TGG + chr1.2:71686684-71686703 MS.gene60769:CDS 35.0%
TTTCGTAAGAATTGTAGGCT+CGG + chr1.2:71686978-71686997 MS.gene60769:intron 35.0%
! ATAATTGGATTTTCCGGGTA+TGG - chr1.2:71686437-71686456 None:intergenic 35.0%
! ATGAAGAAGAGAAAGAGTGT+GGG - chr1.2:71686170-71686189 None:intergenic 35.0%
! CTTATGCCCTTTTAGCATAA+GGG + chr1.2:71687014-71687033 MS.gene60769:intron 35.0%
! CTTTGAGAACCAATAACAAG+AGG + chr1.2:71688427-71688446 MS.gene60769:intron 35.0%
! CTTTTATCGTTGGCAACTTT+TGG - chr1.2:71689733-71689752 None:intergenic 35.0%
! GCACTGTACTGTTTGATAAT+TGG - chr1.2:71686452-71686471 None:intergenic 35.0%
! GTGTTGATCATGATGATGTT+GGG + chr1.2:71687363-71687382 MS.gene60769:intron 35.0%
! GTTCTTTTCTTTCTGTGTCA+TGG + chr1.2:71687911-71687930 MS.gene60769:intron 35.0%
! GTTTTCTGACAAATGCAAAC+GGG - chr1.2:71687700-71687719 None:intergenic 35.0%
! TGTGTTGATCATGATGATGT+TGG + chr1.2:71687362-71687381 MS.gene60769:intron 35.0%
! TTTTCTGACAAATGCAAACG+GGG - chr1.2:71687699-71687718 None:intergenic 35.0%
!! AGTTAGTCTTTGGAATTGTC+AGG + chr1.2:71687464-71687483 MS.gene60769:intron 35.0%
!! ATGAGTGCTGAATTGCAATT+GGG + chr1.2:71686590-71686609 MS.gene60769:CDS 35.0%
!! ATTCTCCTTGTTGTGGATTT+TGG + chr1.2:71687561-71687580 MS.gene60769:CDS 35.0%
!! CTCTTGTTATTGGTTCTCAA+AGG - chr1.2:71688429-71688448 None:intergenic 35.0%
!! GGGTCAGTATTGTTTCTTTT+TGG + chr1.2:71687769-71687788 MS.gene60769:intron 35.0%
!! GTCTATGATAATGGTCATTC+GGG + chr1.2:71689650-71689669 MS.gene60769:CDS 35.0%
!! TATGAGTGCTGAATTGCAAT+TGG + chr1.2:71686589-71686608 MS.gene60769:CDS 35.0%
!!! TTTGAATTTTTGGCCATGCT+TGG + chr1.2:71686803-71686822 MS.gene60769:intron 35.0%
AACATAGAGCTCCCATTTGA+AGG + chr1.2:71689482-71689501 MS.gene60769:CDS 40.0%
AGATGATTGACTATCCAGCT+TGG - chr1.2:71689563-71689582 None:intergenic 40.0%
AGTCCACTGTACCTTCAAAT+GGG - chr1.2:71689496-71689515 None:intergenic 40.0%
ATCAAAAAGTCGGCATGAAG+TGG - chr1.2:71689423-71689442 None:intergenic 40.0%
ATGATGTTGGGAACAATGAG+AGG + chr1.2:71687375-71687394 MS.gene60769:intron 40.0%
ATGTTGTCGCTGACAATAAC+AGG - chr1.2:71689467-71689486 None:intergenic 40.0%
ATTCAGCTGAGGCTCATATA+TGG - chr1.2:71689092-71689111 None:intergenic 40.0%
ATTTCAAAGGAGCCAAGCAT+CGG + chr1.2:71687742-71687761 MS.gene60769:CDS 40.0%
CATCGGAGATGAATTCTGAT+AGG - chr1.2:71688536-71688555 None:intergenic 40.0%
CATTTCAGACGAGGTACAAT+TGG - chr1.2:71687616-71687635 None:intergenic 40.0%
CCAAAGACTAACTCATAAGC+TGG - chr1.2:71687457-71687476 None:intergenic 40.0%
CCTAGTTAGAGAGAAGTTGT+GGG + chr1.2:71689274-71689293 MS.gene60769:CDS 40.0%
CTGTATGCATAGCTGCAATA+AGG + chr1.2:71687269-71687288 MS.gene60769:intron 40.0%
GAGCAAAAACAATTCAGCTG+AGG - chr1.2:71689103-71689122 None:intergenic 40.0%
GATCACTTAAAACCATGGAG+TGG - chr1.2:71687875-71687894 None:intergenic 40.0%
GATGAAGAAGAGAAAGAGTG+TGG - chr1.2:71686171-71686190 None:intergenic 40.0%
TAACATAGTGTGACCCAAGT+GGG - chr1.2:71688860-71688879 None:intergenic 40.0%
TAACATGCCACATTGCAACT+GGG - chr1.2:71687521-71687540 None:intergenic 40.0%
TAAGTACATTGACATCGTCG+TGG - chr1.2:71689800-71689819 None:intergenic 40.0%
TACTGAATTTCCACCATACC+CGG + chr1.2:71686421-71686440 MS.gene60769:CDS 40.0%
TAGTCCACTGTACCTTCAAA+TGG - chr1.2:71689497-71689516 None:intergenic 40.0%
TCAAAAAGTCGGCATGAAGT+GGG - chr1.2:71689422-71689441 None:intergenic 40.0%
TCGAGAGAAAAGAAAACCAC+CGG + chr1.2:71689763-71689782 MS.gene60769:CDS 40.0%
TGCTGAATTGCAATTGGGTA+TGG + chr1.2:71686595-71686614 MS.gene60769:CDS 40.0%
TGTTAAAGATGAGATTGCCC+CGG + chr1.2:71687536-71687555 MS.gene60769:CDS 40.0%
TTAACATGCCACATTGCAAC+TGG - chr1.2:71687522-71687541 None:intergenic 40.0%
TTGGGAATGAGGATTATCAG+AGG + chr1.2:71686642-71686661 MS.gene60769:CDS 40.0%
! GCTTATGCCCTTTTAGCATA+AGG + chr1.2:71687013-71687032 MS.gene60769:intron 40.0%
! TAACAGGAGTGTGATTATGC+TGG + chr1.2:71689197-71689216 MS.gene60769:intron 40.0%
! TAAGAATTGTAGGCTCGGTT+TGG + chr1.2:71686983-71687002 MS.gene60769:intron 40.0%
! TAAGGTCTTATGTATGTGCC+AGG - chr1.2:71688463-71688482 None:intergenic 40.0%
! TCCAAAAGAAAAGGCATGCA+AGG - chr1.2:71687800-71687819 None:intergenic 40.0%
!! CCAGCTTATGAGTTAGTCTT+TGG + chr1.2:71687454-71687473 MS.gene60769:intron 40.0%
!! GAAAGGGGTTTTTAGGAAGA+AGG + chr1.2:71686619-71686638 MS.gene60769:CDS 40.0%
!! GATCATGTGTTTGTTGTCAC+TGG + chr1.2:71686725-71686744 MS.gene60769:CDS 40.0%
!! GGAGCATTGTTGTTGTTCTT+TGG - chr1.2:71686137-71686156 None:intergenic 40.0%
!! GGGTTTTTAGGAAGAAGGTT+GGG + chr1.2:71686624-71686643 MS.gene60769:CDS 40.0%
!! TATGATAATGGTCATTCGGG+TGG + chr1.2:71689653-71689672 MS.gene60769:CDS 40.0%
!! TCCTTGTTGTGGATTTTGGT+GGG + chr1.2:71687565-71687584 MS.gene60769:CDS 40.0%
!! TGGCTCCTTTGAAATAGAGA+AGG - chr1.2:71687737-71687756 None:intergenic 40.0%
!!! TTAGGCTTTTGTTTTGGGAG+TGG - chr1.2:71688090-71688109 None:intergenic 40.0%
AAAGCATGGAATCGTTCTGG+TGG + chr1.2:71686698-71686717 MS.gene60769:CDS 45.0%
AACAGTACAGTGCGGAGTAT+TGG + chr1.2:71686459-71686478 MS.gene60769:CDS 45.0%
AAGCATGGAATCGTTCTGGT+GGG + chr1.2:71686699-71686718 MS.gene60769:CDS 45.0%
AATGGTCATTCGGGTGGTAT+TGG + chr1.2:71689659-71689678 MS.gene60769:CDS 45.0%
ACCCACCAAAATCCACAACA+AGG - chr1.2:71687569-71687588 None:intergenic 45.0%
ACTTCCTGGGGTGTATGAAA+TGG - chr1.2:71688290-71688309 None:intergenic 45.0%
AGGCTCATATATGGCCAAAG+AGG - chr1.2:71689083-71689102 None:intergenic 45.0%
ATGAGGATTATCAGAGGCAG+AGG + chr1.2:71686648-71686667 MS.gene60769:CDS 45.0%
CATGGCACTTGTTCTTTGTG+TGG + chr1.2:71687929-71687948 MS.gene60769:intron 45.0%
CCCACAACTTCTCTCTAACT+AGG - chr1.2:71689277-71689296 None:intergenic 45.0%
CGAGAGAAAAGAAAACCACC+GGG + chr1.2:71689764-71689783 MS.gene60769:CDS 45.0%
CTAACATAGTGTGACCCAAG+TGG - chr1.2:71688861-71688880 None:intergenic 45.0%
GAAGAACGTGAGAGAGAGAA+TGG - chr1.2:71686201-71686220 None:intergenic 45.0%
GCCTAGTTAGAGAGAAGTTG+TGG + chr1.2:71689273-71689292 MS.gene60769:CDS 45.0%
GGCGAGAGCAATCAATACAA+GGG + chr1.2:71689354-71689373 MS.gene60769:CDS 45.0%
GTACTGGGTCGTTTGCAAAA+CGG + chr1.2:71686516-71686535 MS.gene60769:CDS 45.0%
GTCTGTTAGCTGCAATATGC+TGG - chr1.2:71688796-71688815 None:intergenic 45.0%
GTGATGCACTTAAACCAAGC+TGG + chr1.2:71689546-71689565 MS.gene60769:CDS 45.0%
GTGTTGGATCATTTCAGACG+AGG - chr1.2:71687625-71687644 None:intergenic 45.0%
TAATGAGCCCGGTGTAATCA+TGG + chr1.2:71689307-71689326 MS.gene60769:CDS 45.0%
TACTGGGTCGTTTGCAAAAC+GGG + chr1.2:71686517-71686536 MS.gene60769:CDS 45.0%
TAGGAAGAAGGTTGGGAATG+AGG + chr1.2:71686631-71686650 MS.gene60769:CDS 45.0%
TCAATCACTCTTATGCCCGT+TGG + chr1.2:71688114-71688133 MS.gene60769:intron 45.0%
TGAGGATTATCAGAGGCAGA+GGG + chr1.2:71686649-71686668 MS.gene60769:CDS 45.0%
TGATTCACTGCACCATCCAT+AGG - chr1.2:71689692-71689711 None:intergenic 45.0%
TGCAATTGGGTATGGCGAAA+GGG + chr1.2:71686603-71686622 MS.gene60769:CDS 45.0%
TGGACTCTTTATCCACTCCA+TGG + chr1.2:71687860-71687879 MS.gene60769:intron 45.0%
TTGCAATTGGGTATGGCGAA+AGG + chr1.2:71686602-71686621 MS.gene60769:CDS 45.0%
! AAGAGAGAGTGAAGAGTGTG+TGG - chr1.2:71686246-71686265 None:intergenic 45.0%
! AAGAGTGTGGGAATGGAGAA+TGG - chr1.2:71686158-71686177 None:intergenic 45.0%
! ACGAAAGCATGGAATCGTTC+TGG + chr1.2:71686695-71686714 MS.gene60769:CDS 45.0%
! AGCACCAAAATGATGGAACG+TGG - chr1.2:71688837-71688856 None:intergenic 45.0%
! AGCGTTGAGCCTCTTGTTAT+TGG - chr1.2:71688439-71688458 None:intergenic 45.0%
! ATTGGATTTTCCGGGTATGG+TGG - chr1.2:71686434-71686453 None:intergenic 45.0%
! CAAGTTGAGAGTTGTGCCAT+GGG - chr1.2:71688762-71688781 None:intergenic 45.0%
! GAAGAGAAAGAGTGTGGGAA+TGG - chr1.2:71686165-71686184 None:intergenic 45.0%
! GCCTTGCATGCCTTTTCTTT+TGG + chr1.2:71687796-71687815 MS.gene60769:intron 45.0%
! GTAGCCACGTTCCATCATTT+TGG + chr1.2:71688830-71688849 MS.gene60769:intron 45.0%
! GTATGGCGAAAGGGGTTTTT+AGG + chr1.2:71686612-71686631 MS.gene60769:CDS 45.0%
!! AAGTGGGAGCACCAAAATGA+TGG - chr1.2:71688844-71688863 None:intergenic 45.0%
!! AGTGCGGAGTATTGGATCAT+GGG + chr1.2:71686467-71686486 MS.gene60769:CDS 45.0%
!! CTCCTTGTTGTGGATTTTGG+TGG + chr1.2:71687564-71687583 MS.gene60769:CDS 45.0%
!! GGGGTTTTTAGGAAGAAGGT+TGG + chr1.2:71686623-71686642 MS.gene60769:CDS 45.0%
!! TTGTTGTGGATTTTGGTGGG+TGG + chr1.2:71687568-71687587 MS.gene60769:CDS 45.0%
!!! ATCATTTTGGTGCTCCCACT+TGG + chr1.2:71688843-71688862 MS.gene60769:intron 45.0%
!!! TCATTTTGGTGCTCCCACTT+GGG + chr1.2:71688844-71688863 MS.gene60769:intron 45.0%
!!! ATTTTATAATTAAACATTAT+AGG - chr1.2:71689148-71689167 None:intergenic 5.0%
AAGAAAACCACCGGGTGTGT+TGG + chr1.2:71689772-71689791 MS.gene60769:CDS 50.0%
AAGGCTTCCCTAATGCGACT+GGG + chr1.2:71689333-71689352 MS.gene60769:CDS 50.0%
ACACCGACGAAATTGCGTAC+TGG + chr1.2:71686500-71686519 MS.gene60769:CDS 50.0%
ACTGCACCATCCATAGGTAC+AGG - chr1.2:71689686-71689705 None:intergenic 50.0%
AGACACGTTCCGCCAAAACA+TGG + chr1.2:71689607-71689626 MS.gene60769:CDS 50.0%
AGAGTTGTGCCATGGGACAT+GGG - chr1.2:71688755-71688774 None:intergenic 50.0%
AGGCAGAGAATTCACCCTCA+AGG - chr1.2:71689049-71689068 None:intergenic 50.0%
AGGGCGTAATTGAGGGATCT+GGG - chr1.2:71686311-71686330 None:intergenic 50.0%
ATTGGCCCTGTACCTATGGA+TGG + chr1.2:71689677-71689696 MS.gene60769:CDS 50.0%
CACAACTCTCAACTTGGAGC+GGG + chr1.2:71688766-71688785 MS.gene60769:intron 50.0%
CACCGACGAAATTGCGTACT+GGG + chr1.2:71686501-71686520 MS.gene60769:CDS 50.0%
CCATGGCACAACTCTCAACT+TGG + chr1.2:71688760-71688779 MS.gene60769:intron 50.0%
CCTTCCTCCATGATTACACC+GGG - chr1.2:71689317-71689336 None:intergenic 50.0%
CGGGGTAGAAGATGTGTGTA+CGG - chr1.2:71687681-71687700 None:intergenic 50.0%
CTGCACCATCCATAGGTACA+GGG - chr1.2:71689685-71689704 None:intergenic 50.0%
GACCCAGTACGCAATTTCGT+CGG - chr1.2:71686506-71686525 None:intergenic 50.0%
GCAATTGGGTATGGCGAAAG+GGG + chr1.2:71686604-71686623 MS.gene60769:CDS 50.0%
GCACAACTCTCAACTTGGAG+CGG + chr1.2:71688765-71688784 MS.gene60769:intron 50.0%
GCCTTCCTCCATGATTACAC+CGG - chr1.2:71689318-71689337 None:intergenic 50.0%
GGGCGAGAGCAATCAATACA+AGG + chr1.2:71689353-71689372 MS.gene60769:CDS 50.0%
TCCACAACAAGGAGAATGGC+CGG - chr1.2:71687558-71687577 None:intergenic 50.0%
TCTCTTCAACCAACCACCTC+CGG + chr1.2:71686260-71686279 MS.gene60769:CDS 50.0%
TTCACCTCCGATTCCCGAAT+CGG + chr1.2:71686350-71686369 MS.gene60769:CDS 50.0%
! AGAGAGTGAAGAGTGTGTGG+TGG - chr1.2:71686243-71686262 None:intergenic 50.0%
! ATCCGAGTTTTGCCTGCATC+CGG + chr1.2:71689385-71689404 MS.gene60769:CDS 50.0%
! CCAAGTTGAGAGTTGTGCCA+TGG - chr1.2:71688763-71688782 None:intergenic 50.0%
! CTTGCCATTTCATACACCCC+AGG + chr1.2:71688283-71688302 MS.gene60769:intron 50.0%
! GAACGTGGCTACAGCTTGTT+TGG - chr1.2:71688822-71688841 None:intergenic 50.0%
! GCTCCCATTTGAAGGTACAG+TGG + chr1.2:71689490-71689509 MS.gene60769:CDS 50.0%
! GTTGAGGAGGGCGTAATTGA+GGG - chr1.2:71686318-71686337 None:intergenic 50.0%
!! CAGTGCGGAGTATTGGATCA+TGG + chr1.2:71686466-71686485 MS.gene60769:CDS 50.0%
!! GTGCGGAGTATTGGATCATG+GGG + chr1.2:71686468-71686487 MS.gene60769:CDS 50.0%
!! TGCGGAGTATTGGATCATGG+GGG + chr1.2:71686469-71686488 MS.gene60769:CDS 50.0%
!! TGGTATTGGCCCTGTACCTA+TGG + chr1.2:71689673-71689692 MS.gene60769:CDS 50.0%
!! TTTTGGGAGTGGCGACAGTA+GGG - chr1.2:71688079-71688098 None:intergenic 50.0%
ACAAGAGGCTCAACGCTTCC+TGG + chr1.2:71688442-71688461 MS.gene60769:intron 55.0%
ACGCAGTTCCCTCTCGTCTA+GGG + chr1.2:71688708-71688727 MS.gene60769:intron 55.0%
AGCCGGATGCAGGCAAAACT+CGG - chr1.2:71689390-71689409 None:intergenic 55.0%
ATTGAGGGATCTGGGGAGGT+CGG - chr1.2:71686303-71686322 None:intergenic 55.0%
CACAACAAGGAGAATGGCCG+GGG - chr1.2:71687556-71687575 None:intergenic 55.0%
CACAGAGCAGCGAATACCTC+TGG - chr1.2:71688677-71688696 None:intergenic 55.0%
CACTTCCAGTCCACTAAGCC+CGG - chr1.2:71688623-71688642 None:intergenic 55.0%
CCACAACAAGGAGAATGGCC+GGG - chr1.2:71687557-71687576 None:intergenic 55.0%
CCCGGTGTAATCATGGAGGA+AGG + chr1.2:71689314-71689333 MS.gene60769:CDS 55.0%
CCTGTAGTCCCTCCACTGTT+GGG + chr1.2:71688649-71688668 MS.gene60769:intron 55.0%
CGTAATTGAGGGATCTGGGG+AGG - chr1.2:71686307-71686326 None:intergenic 55.0%
CTCTTGGTCCCTAGACGAGA+GGG - chr1.2:71688719-71688738 None:intergenic 55.0%
GAAGGCTTCCCTAATGCGAC+TGG + chr1.2:71689332-71689351 MS.gene60769:CDS 55.0%
GAGAGTTGTGCCATGGGACA+TGG - chr1.2:71688756-71688775 None:intergenic 55.0%
GATTCGGGAATCGGAGGTGA+AGG - chr1.2:71686351-71686370 None:intergenic 55.0%
GGATTATCAGAGGCAGAGGG+AGG + chr1.2:71686652-71686671 MS.gene60769:CDS 55.0%
GGGCGAAGGTCTATGTCTCT+TGG - chr1.2:71688735-71688754 None:intergenic 55.0%
GGGCGTAATTGAGGGATCTG+GGG - chr1.2:71686310-71686329 None:intergenic 55.0%
GGTTCAAAGGCTAGGCTCAC+CGG + chr1.2:71688601-71688620 MS.gene60769:intron 55.0%
GTTCAAAGGCTAGGCTCACC+GGG + chr1.2:71688602-71688621 MS.gene60769:intron 55.0%
TCTCTTGGTCCCTAGACGAG+AGG - chr1.2:71688720-71688739 None:intergenic 55.0%
TGAAGGACCAGTAGCGGTTG+AGG - chr1.2:71686334-71686353 None:intergenic 55.0%
TGAGCCCGGTGTAATCATGG+AGG + chr1.2:71689310-71689329 MS.gene60769:CDS 55.0%
TGGCAGACCCAGTTGCAATG+TGG + chr1.2:71687511-71687530 MS.gene60769:intron 55.0%
TTTGGGAGTGGCGACAGTAG+GGG - chr1.2:71688078-71688097 None:intergenic 55.0%
! AGTTTTGCCTGCATCCGGCT+GGG + chr1.2:71689390-71689409 MS.gene60769:CDS 55.0%
! ATACCTCTGGCTCCCAACAG+TGG - chr1.2:71688664-71688683 None:intergenic 55.0%
! GAGGGCGTAATTGAGGGATC+TGG - chr1.2:71686312-71686331 None:intergenic 55.0%
! GAGTGAAGAGTGTGTGGTGG+TGG - chr1.2:71686240-71686259 None:intergenic 55.0%
! GATCAACGTCGCTGCCGATT+CGG - chr1.2:71686367-71686386 None:intergenic 55.0%
! GCTGCACTCGAGCCATGTTT+TGG - chr1.2:71689622-71689641 None:intergenic 55.0%
! GGTTGAGGAGGGCGTAATTG+AGG - chr1.2:71686319-71686338 None:intergenic 55.0%
! GTGGCTACAGCTTGTTTGGC+TGG - chr1.2:71688818-71688837 None:intergenic 55.0%
!! AGAGTGTGTGGTGGTGGTGT+AGG - chr1.2:71686234-71686253 None:intergenic 55.0%
!! ATCAACGTCGCTGCCGATTC+GGG - chr1.2:71686366-71686385 None:intergenic 55.0%
!! GCACTCGAGCCATGTTTTGG+CGG - chr1.2:71689619-71689638 None:intergenic 55.0%
!!! GTTTTGGGAGTGGCGACAGT+AGG - chr1.2:71688080-71688099 None:intergenic 55.0%
ACGTTGATGCCGGAGGTGGT+TGG - chr1.2:71686272-71686291 None:intergenic 60.0%
ACTCTCAACTTGGAGCGGGC+AGG + chr1.2:71688770-71688789 MS.gene60769:intron 60.0%
AGACCTTCGCCCATGTCCCA+TGG + chr1.2:71688743-71688762 MS.gene60769:intron 60.0%
AGACGAGAGGGAACTGCGTG+AGG - chr1.2:71688707-71688726 None:intergenic 60.0%
AGGACCAGTAGCGGTTGAGG+AGG - chr1.2:71686331-71686350 None:intergenic 60.0%
CACGCAGTTCCCTCTCGTCT+AGG + chr1.2:71688707-71688726 MS.gene60769:intron 60.0%
CCCAACAGTGGAGGGACTAC+AGG - chr1.2:71688652-71688671 None:intergenic 60.0%
CCCGGCCATTCTCCTTGTTG+TGG + chr1.2:71687554-71687573 MS.gene60769:CDS 60.0%
CGGAGGTGAAGGACCAGTAG+CGG - chr1.2:71686340-71686359 None:intergenic 60.0%
CGTCGTGGAACCAACACACC+CGG - chr1.2:71689785-71689804 None:intergenic 60.0%
GACGTAGACGTTGATGCCGG+AGG - chr1.2:71686279-71686298 None:intergenic 60.0%
GCCTGTAGTCCCTCCACTGT+TGG + chr1.2:71688648-71688667 MS.gene60769:intron 60.0%
GCTCTCGCCCAGTCGCATTA+GGG - chr1.2:71689343-71689362 None:intergenic 60.0%
GGACCAGTAGCGGTTGAGGA+GGG - chr1.2:71686330-71686349 None:intergenic 60.0%
GGCGACGTAGACGTTGATGC+CGG - chr1.2:71686282-71686301 None:intergenic 60.0%
GTAGACGTTGATGCCGGAGG+TGG - chr1.2:71686276-71686295 None:intergenic 60.0%
TGCTCTCGCCCAGTCGCATT+AGG - chr1.2:71689344-71689363 None:intergenic 60.0%
! CTCTGGCTCCCAACAGTGGA+GGG - chr1.2:71688660-71688679 None:intergenic 60.0%
! GAGTTTTGCCTGCATCCGGC+TGG + chr1.2:71689389-71689408 MS.gene60769:CDS 60.0%
! GTTTTGCCTGCATCCGGCTG+GGG + chr1.2:71689391-71689410 MS.gene60769:CDS 60.0%
!! AAGGAGCCAAGCATCGGCAC+CGG + chr1.2:71687748-71687767 MS.gene60769:CDS 60.0%
!! GTCGCTGCCGATTCGGGAAT+CGG - chr1.2:71686360-71686379 None:intergenic 60.0%
!! GTGTGTGGTGGTGGTGTAGG+AGG - chr1.2:71686231-71686250 None:intergenic 60.0%
ACGCCCTCCTCAACCGCTAC+TGG + chr1.2:71686324-71686343 MS.gene60769:CDS 65.0%
CCTCCACTGTTGGGAGCCAG+AGG + chr1.2:71688658-71688677 MS.gene60769:intron 65.0%
CGTGGAACCAACACACCCGG+TGG - chr1.2:71689782-71689801 None:intergenic 65.0%
GAAGTGGGTGTGTCCCCAGC+CGG - chr1.2:71689407-71689426 None:intergenic 65.0%
GAGAGGGAACTGCGTGAGGC+TGG - chr1.2:71688703-71688722 None:intergenic 65.0%
GCTAGGCTCACCGGGCTTAG+TGG + chr1.2:71688610-71688629 MS.gene60769:intron 65.0%
GTGCCATGGGACATGGGCGA+AGG - chr1.2:71688749-71688768 None:intergenic 65.0%
! CCTCTGGCTCCCAACAGTGG+AGG - chr1.2:71688661-71688680 None:intergenic 65.0%
! GCTCACCGGGCTTAGTGGAC+TGG + chr1.2:71688615-71688634 MS.gene60769:intron 65.0%
!! ACTGACCCGGTGCCGATGCT+TGG - chr1.2:71687757-71687776 None:intergenic 65.0%
!! AGGAGCCAAGCATCGGCACC+GGG + chr1.2:71687749-71687768 MS.gene60769:CDS 65.0%
!! GCTGCCGATTCGGGAATCGG+AGG - chr1.2:71686357-71686376 None:intergenic 65.0%
GTGTGTCCCCAGCCGGATGC+AGG - chr1.2:71689400-71689419 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 71686122 71689820 71686122 ID=MS.gene60769
chr1.2 mRNA 71686122 71689820 71686122 ID=MS.gene60769.t1;Parent=MS.gene60769
chr1.2 exon 71686122 71686746 71686122 ID=MS.gene60769.t1.exon1;Parent=MS.gene60769.t1
chr1.2 CDS 71686122 71686746 71686122 ID=cds.MS.gene60769.t1;Parent=MS.gene60769.t1
chr1.2 exon 71687517 71687770 71687517 ID=MS.gene60769.t1.exon2;Parent=MS.gene60769.t1
chr1.2 CDS 71687517 71687770 71687517 ID=cds.MS.gene60769.t1;Parent=MS.gene60769.t1
chr1.2 exon 71689269 71689820 71689269 ID=MS.gene60769.t1.exon3;Parent=MS.gene60769.t1
chr1.2 CDS 71689269 71689820 71689269 ID=cds.MS.gene60769.t1;Parent=MS.gene60769.t1
Gene Sequence

>MS.gene60769

ATGCTTCCAATTCCAAAGAACAACAACAATGCTCCATTCTCCATTCCCACACTCTTTCTCTTCTTCATCATCATCTCCATTCTCTCTCTCACGTTCTTCTTCTTCTCCTCCTACACCACCACCACACACTCTTCACTCTCTCTTCAACCAACCACCTCCGGCATCAACGTCTACGTCGCCGACCTCCCCAGATCCCTCAATTACGCCCTCCTCAACCGCTACTGGTCCTTCACCTCCGATTCCCGAATCGGCAGCGACGTTGATCGTGAAATTCGATCCAAAAGCAAAGCCTTAGAATTTACTGAATTTCCACCATACCCGGAAAATCCAATTATCAAACAGTACAGTGCGGAGTATTGGATCATGGGGGATCTTGTTACACCGACGAAATTGCGTACTGGGTCGTTTGCAAAACGGGTTTTTGATGAACGTGATGCTGATGTTGTTTTTGTTCCGTTTTTTGCTACTATGAGTGCTGAATTGCAATTGGGTATGGCGAAAGGGGTTTTTAGGAAGAAGGTTGGGAATGAGGATTATCAGAGGCAGAGGGAGGTTGTTGATTTTGTGAAGAAAACGAAAGCATGGAATCGTTCTGGTGGGAGAGATCATGTGTTTGTTGTCACTGGTATGTTTTGTTTTCCGTGCTTGCAATTTGCAAACTTGTTTTGTTACTGTTATGGTTTTGAATTTTTGGCCATGCTTGGATAAATAGCTTAATTCAGCCCTTGTTTATCATATACGTGTTTATGGATAAGCTATTTCTACAACAAAGGATGAAATAAATTCGAACTGTTTTCATAAGATAAGTTCTTTTCATAAGCTATCCTGAGAATCTTTTGAACATGTCATTAGTTGTTTTCGTAAGAATTGTAGGCTCGGTTTGGATAAACAGCTTATGCCCTTTTAGCATAAGGGCTTATAAGATAAGCACTTATCTACATATGTTATTTCTATAACAAGAGATAAATAAATTCAAACTGTTTTCGTAACTTATCATGGAGAGCTTATGGGATTAAGCCGAAAACAGTTTATGGACATGTCATAAGTTGTTTCTATAAGTTCTCTTAATAAATCAATCCAAATAAGCACTTAATGTAGTGTAGTTGAACTGTCATTTAAGAATGTTCAAGGTGTTGAATTAATTGTACTGTATGCATAGCTGCAATAAGGGTTTTTAGTGTTGTTACATTTCCCCCAAATGTTATGTTCATATGTTGTGTATTCTTATTGATGATTGATTTGTGTTGATCATGATGATGTTGGGAACAATGAGAGGTTAGTTTAATGCATGTGTGAAAATGTAAAAGGAGAAAATTATGTAGAGTGCTGTTACCAGCTTATGAGTTAGTCTTTGGAATTGTCAGGTTATGTTAAAACTGAAGCATTGTTTGGCAGACCCAGTTGCAATGTGGCATGTTAAAGATGAGATTGCCCCGGCCATTCTCCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAAATCATCCAATTGTACCTCGTCTGAAATGATCCAACACACTCAAGTTTCTGTAATTAAAGACGTGATTGTGCCGTACACACATCTTCTACCCCGTTTGCATTTGTCAGAAAACAAGCAGCGTCACAACCTTCTCTATTTCAAAGGAGCCAAGCATCGGCACCGGGTCAGTATTGTTTCTTTTTGGACTAGCCTTGCATGCCTTTTCTTTTGGAACTATGCTCTACAGCTTTAGCATCTTTTATGACTTATAATTGGACTCTTTATCCACTCCATGGTTTTAAGTGATCAAATTTATTGGGTGTTGTTCTTTTCTTTCTGTGTCATGGCACTTGTTCTTTGTGTGGATTTTTCTTGTCATGCACTTCTGTTGTCAGAAAATCTCAGTTGTGGGTTATAGCAATAGCATCTTATTAGTGTATGCTGTTTTTTATGTTAAATTTTATGACTTAAAATTTCAATTTAAATTACCCCTACTGTCGCCACTCCCAAAACAAAAGCCTAACTATTCAATCACTCTTATGCCCGTTGGTTTAAAATTTGAAAATACCTGTGATATTACTCATAGTTGGATATGCCACTAGATAAAAATCATCACTTAAAACCATTGATTATAGTGTATTAGTGTTTGCTTATTAAAGCTTCATAGCAATATGAGCATTATGTATTCACTTTTGTCTTGCCATTTCATACACCCCAGGAAGTTATAATTATATCAATCTGGGAAATTATGCTTCTTAACTATTTAACAGCATTTTGATTTACTAAAATACTGTTTTGCAAAGCATACACTAGTTTTCAATGTTATAAGTGTGTGGTTTCCTTTGAGAACCAATAACAAGAGGCTCAACGCTTCCTGGCACATACATAAGACCTTACTTTTTAACATTACAGGGTTACTTCTGCGCATGAATGAATTGTTTCAAAGCCTATCAGAATTCATCTCCGATGTTTACTAGTGCTTTTTTTTTTTTGGTTACTCTTTACAAAAGTAATGGTTCAAAGGCTAGGCTCACCGGGCTTAGTGGACTGGAAGTGCAGCAGCCTGTAGTCCCTCCACTGTTGGGAGCCAGAGGTATTCGCTGCTCTGTGAAACCAGCCTCACGCAGTTCCCTCTCGTCTAGGGACCAAGAGACATAGACCTTCGCCCATGTCCCATGGCACAACTCTCAACTTGGAGCGGGCAGGCCAGCATATTGCAGCTAACAGACCAGCCAAACAAGCTGTAGCCACGTTCCATCATTTTGGTGCTCCCACTTGGGTCACACTATGTTAGTAATATATTGAGGATTGGTTTGACCTTTAAATTTACTTAATGGAATATGACTAATTTTGTAATTAAATTTAAGTTATTGCTTTTTCATGTTTAAGGCTTTGAATCTACATTTTCTGAGTCGTATGAAAATTCTAGAACATAATGTTGATGGTAAATAGTTGACATCCTTGAGGGTGAATTCTCTGCCTTTTATTTTTCTCCTCTTTGGCCATATATGAGCCTCAGCTGAATTGTTTTTGCTCAACAAAACACTGAAAAGCCAATCCTATAATGTTTAATTATAAAATAGATGCAAAAATTTATGTAGGTATTCATCTAACAGGAGTGTGATTATGCTGGTCTTTATCTATTCCATGTTAATCTTACTGAAAAATTGTTCAAATTACAGGGAGGCCTAGTTAGAGAGAAGTTGTGGGATCTATTGAATAATGAGCCCGGTGTAATCATGGAGGAAGGCTTCCCTAATGCGACTGGGCGAGAGCAATCAATACAAGGGATGAGAACATCCGAGTTTTGCCTGCATCCGGCTGGGGACACACCCACTTCATGCCGACTTTTTGATGCCATTCAAAGTCTTTGCATACCTGTTATTGTCAGCGACAACATAGAGCTCCCATTTGAAGGTACAGTGGACTATACAGAATTTTCAGTTTTTGTAGCAGTTGGTGATGCACTTAAACCAAGCTGGATAGTCAATCATCTTCAAAGCTTTTCAAAAAAGCAGAAAGACACGTTCCGCCAAAACATGGCTCGAGTGCAGCCCATGTTTGTCTATGATAATGGTCATTCGGGTGGTATTGGCCCTGTACCTATGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAGTTGCCAACGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCGGGTGTGTTGGTTCCACGACGATGTCAATGTACTTAA
Protein sequence

>MS.gene60769.t1

MLPIPKNNNNAPFSIPTLFLFFIIISILSLTFFFFSSYTTTTHSSLSLQPTTSGINVYVADLPRSLNYALLNRYWSFTSDSRIGSDVDREIRSKSKALEFTEFPPYPENPIIKQYSAEYWIMGDLVTPTKLRTGSFAKRVFDERDADVVFVPFFATMSAELQLGMAKGVFRKKVGNEDYQRQREVVDFVKKTKAWNRSGGRDHVFVVTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKSSNCTSSEMIQHTQVSVIKDVIVPYTHLLPRLHLSENKQRHNLLYFKGAKHRHRGGLVREKLWDLLNNEPGVIMEEGFPNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGTVDYTEFSVFVAVGDALKPSWIVNHLQSFSKKQKDTFRQNMARVQPMFVYDNGHSGGIGPVPMDGAVNHIWKKVHQKLPTIKEAIIREKRKPPGVLVPRRCQCT