Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61436.t1 | RHN52860.1 | 80.7 | 690 | 106 | 5 | 1 | 688 | 34 | 698 | 2.50E-264 | 921.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61436.t1 | Q8RXE7 | 29.7 | 558 | 319 | 19 | 1 | 512 | 34 | 564 | 1.3e-32 | 142.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61436.t1 | A0A396HHP6 | 80.7 | 690 | 106 | 5 | 1 | 688 | 34 | 698 | 1.8e-264 | 921.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049293 | MS.gene61436 | 0.801928 | 7.14E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene61436 | 0.842196 | 3.00E-58 | -1.69E-46 |
| MS.gene05509 | MS.gene61436 | 0.880401 | 5.66E-70 | -1.69E-46 |
| MS.gene057079 | MS.gene61436 | -0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene058661 | MS.gene61436 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene059872 | MS.gene61436 | 0.840677 | 7.53E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61436.t1 | MTR_6g086630 | 75.172 | 725 | 36 | 7 | 1 | 681 | 34 | 658 | 0.0 | 1020 |
| MS.gene61436.t1 | MTR_8g103750 | 53.825 | 732 | 217 | 15 | 1 | 688 | 34 | 688 | 0.0 | 665 |
| MS.gene61436.t1 | MTR_8g103750 | 51.857 | 700 | 216 | 15 | 33 | 688 | 1 | 623 | 0.0 | 587 |
| MS.gene61436.t1 | MTR_6g027300 | 47.727 | 220 | 97 | 6 | 1 | 205 | 33 | 249 | 5.96e-53 | 194 |
| MS.gene61436.t1 | MTR_6g027300 | 47.727 | 220 | 97 | 6 | 1 | 205 | 33 | 249 | 7.75e-53 | 194 |
| MS.gene61436.t1 | MTR_1g010280 | 30.948 | 601 | 290 | 23 | 33 | 560 | 1 | 549 | 4.66e-49 | 182 |
| MS.gene61436.t1 | MTR_6g027300 | 43.719 | 199 | 94 | 6 | 22 | 205 | 54 | 249 | 7.66e-37 | 147 |
| MS.gene61436.t1 | MTR_6g027300 | 40.426 | 188 | 94 | 6 | 33 | 205 | 1 | 185 | 1.78e-29 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61436.t1 | AT4G13350 | 44.554 | 606 | 239 | 13 | 1 | 592 | 34 | 556 | 1.69e-131 | 401 |
| MS.gene61436.t1 | AT4G13350 | 44.554 | 606 | 239 | 13 | 1 | 592 | 34 | 556 | 1.69e-131 | 401 |
| MS.gene61436.t1 | AT4G32630 | 32.293 | 641 | 314 | 30 | 1 | 601 | 30 | 590 | 3.82e-59 | 211 |
| MS.gene61436.t1 | AT4G32630 | 32.188 | 640 | 315 | 30 | 1 | 601 | 30 | 589 | 9.72e-59 | 209 |
| MS.gene61436.t1 | AT4G32630 | 32.188 | 640 | 315 | 30 | 1 | 601 | 30 | 589 | 9.72e-59 | 209 |
| MS.gene61436.t1 | AT4G32630 | 32.188 | 640 | 315 | 30 | 1 | 601 | 30 | 589 | 9.72e-59 | 209 |
| MS.gene61436.t1 | AT4G32630 | 32.188 | 640 | 315 | 30 | 1 | 601 | 30 | 589 | 9.72e-59 | 209 |
| MS.gene61436.t1 | AT4G32630 | 32.188 | 640 | 315 | 30 | 1 | 601 | 30 | 589 | 9.72e-59 | 209 |
| MS.gene61436.t1 | AT1G08680 | 59.124 | 137 | 54 | 2 | 1 | 135 | 34 | 170 | 1.13e-47 | 178 |
| MS.gene61436.t1 | AT1G08680 | 59.124 | 137 | 54 | 2 | 1 | 135 | 34 | 170 | 1.53e-47 | 177 |
| MS.gene61436.t1 | AT1G08680 | 59.124 | 137 | 54 | 2 | 1 | 135 | 34 | 170 | 2.02e-47 | 178 |
| MS.gene61436.t1 | AT1G08680 | 59.124 | 137 | 54 | 2 | 1 | 135 | 34 | 170 | 2.03e-47 | 178 |
| MS.gene61436.t1 | AT1G08680 | 59.124 | 137 | 54 | 2 | 1 | 135 | 34 | 170 | 2.12e-47 | 178 |
Find 242 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGACCTGTTAGAGATATTT+TGG | 0.113010 | 6.3:+79515423 | MS.gene61436:CDS |
| CTCTACTTGGCTTTCGTTAC+TGG | 0.146357 | 6.3:-79516233 | None:intergenic |
| CATACACTTGGGGCTTGATT+TGG | 0.188678 | 6.3:-79517545 | None:intergenic |
| GCTTCTTCGAAACTCGTATT+TGG | 0.194121 | 6.3:+79518309 | MS.gene61436:CDS |
| ATACACTTGGGGCTTGATTT+GGG | 0.205821 | 6.3:-79517544 | None:intergenic |
| CAGGAGAGTTGAGGCATATC+AGG | 0.233416 | 6.3:+79515147 | MS.gene61436:CDS |
| AATATGTGTGCACAAATTTC+TGG | 0.267779 | 6.3:+79513974 | MS.gene61436:CDS |
| GGAGTGGTTCCCGGCCTATC+AGG | 0.277885 | 6.3:-79518625 | None:intergenic |
| CCAGCAGCAGCTCCTAGTTT+TGG | 0.290873 | 6.3:+79516600 | MS.gene61436:CDS |
| TACTTTCCTGCTCCAGTTCA+AGG | 0.301141 | 6.3:+79517174 | MS.gene61436:CDS |
| CCACCCCTGCCATCCTTTCA+AGG | 0.302420 | 6.3:+79517968 | MS.gene61436:CDS |
| CCGAATGGATTCCCTCCTTT+GGG | 0.307754 | 6.3:-79518664 | None:intergenic |
| TTAGAGCTGGGAGTGGTTCC+CGG | 0.312806 | 6.3:-79518634 | None:intergenic |
| CTATCAGGCAGCTGCTGATT+TGG | 0.325530 | 6.3:-79518610 | None:intergenic |
| GAGAAAATGTAATACCTCTT+AGG | 0.336552 | 6.3:+79515446 | MS.gene61436:CDS |
| CCCGAATGGATTCCCTCCTT+TGG | 0.337927 | 6.3:-79518665 | None:intergenic |
| AGGCAAGGAGTTGGGAATTT+CGG | 0.339840 | 6.3:+79518556 | MS.gene61436:CDS |
| CTTCTTCGAAACTCGTATTT+GGG | 0.352108 | 6.3:+79518310 | MS.gene61436:CDS |
| AGTATCAGATGGAGATTATA+AGG | 0.353912 | 6.3:+79515342 | MS.gene61436:CDS |
| TCTCCCAAAATATCTCTAAC+AGG | 0.355400 | 6.3:-79515427 | None:intergenic |
| TTGGTGCCAGTAATGTTAAC+AGG | 0.360040 | 6.3:+79514854 | MS.gene61436:intron |
| TATTACTTGTCACTAGTAAA+AGG | 0.360512 | 6.3:+79518517 | MS.gene61436:CDS |
| ACTGTTGGAGCAACAGGTTC+AGG | 0.363404 | 6.3:-79516301 | None:intergenic |
| GCCCAGGTCTCTAGCTCGTT+CGG | 0.369926 | 6.3:-79515380 | None:intergenic |
| TTTGGGGAAGGGGTTAGAGC+TGG | 0.369937 | 6.3:-79518647 | None:intergenic |
| TGAGGAACTGTTGGAGCAAC+AGG | 0.372048 | 6.3:-79516307 | None:intergenic |
| CTGCCTAATGTACCACCTTC+AGG | 0.373574 | 6.3:+79517995 | MS.gene61436:CDS |
| GGATTTCCTGACTGCAAAAC+AGG | 0.377480 | 6.3:-79516355 | None:intergenic |
| GAAATCCCAGTGATGACAAT+TGG | 0.385158 | 6.3:+79516371 | MS.gene61436:CDS |
| TTCATGCTATGCAGCATGTA+TGG | 0.385706 | 6.3:-79518354 | None:intergenic |
| CTAGGAGCTGCTGCTGGAAT+AGG | 0.389666 | 6.3:-79516594 | None:intergenic |
| CAAATCAGCAGCTGCCTGAT+AGG | 0.391546 | 6.3:+79518611 | MS.gene61436:CDS |
| AAGATTCCGACACGGACAAT+TGG | 0.392823 | 6.3:-79516471 | None:intergenic |
| CCCATTTGCCAACCTTGAAC+TGG | 0.394548 | 6.3:-79517186 | None:intergenic |
| GTTTGTTAAGCATGTTTATG+AGG | 0.401277 | 6.3:+79514885 | MS.gene61436:CDS |
| GATCAAGAAAGTAGGCAATA+TGG | 0.406628 | 6.3:+79515256 | MS.gene61436:CDS |
| CATTGTCCTACATTATTATG+AGG | 0.408827 | 6.3:-79516672 | None:intergenic |
| AACCGTGCAGTCTTCAACCC+TGG | 0.409273 | 6.3:+79517922 | MS.gene61436:intron |
| GATCGGCATCAAAATCAATA+AGG | 0.413195 | 6.3:-79516279 | None:intergenic |
| TTGAGGCACACTAGATTGTT+GGG | 0.413764 | 6.3:-79516332 | None:intergenic |
| CCCAGGTCTCTAGCTCGTTC+GGG | 0.418011 | 6.3:-79515379 | None:intergenic |
| CCAAAGGAGGGAATCCATTC+GGG | 0.420807 | 6.3:+79518665 | MS.gene61436:CDS |
| TGTGTATCACCTTGGACTCC+TGG | 0.424442 | 6.3:-79516508 | None:intergenic |
| CCAGTTCAAGGTTGGCAAAT+GGG | 0.424788 | 6.3:+79517186 | MS.gene61436:CDS |
| GGATTCCCTCCTTTGGGGAA+GGG | 0.425243 | 6.3:-79518658 | None:intergenic |
| GACACACAGGAACGTCGTTA+TGG | 0.426530 | 6.3:+79515196 | MS.gene61436:CDS |
| GTCCTCCAGTTGTCAATGAT+TGG | 0.426864 | 6.3:+79515302 | MS.gene61436:CDS |
| GCAAGTACTTACCTGCTGTC+AGG | 0.428298 | 6.3:-79514773 | None:intergenic |
| GTTGAGGCACACTAGATTGT+TGG | 0.430065 | 6.3:-79516333 | None:intergenic |
| ATGCCTGAAGGTGGTACATT+AGG | 0.431901 | 6.3:-79517998 | None:intergenic |
| CCCAAAGGAGGGAATCCATT+CGG | 0.433525 | 6.3:+79518664 | MS.gene61436:CDS |
| TTGGCAAATGGGTCCTCCGC+AGG | 0.434161 | 6.3:+79517197 | MS.gene61436:CDS |
| CTGTTAAAAGCCTCATTAGC+AGG | 0.435777 | 6.3:-79516969 | None:intergenic |
| TTGGGGAAGGGGTTAGAGCT+GGG | 0.436834 | 6.3:-79518646 | None:intergenic |
| GATTCCCTCCTTTGGGGAAG+GGG | 0.439278 | 6.3:-79518657 | None:intergenic |
| GGAACTGAGGGAAACATGTT+CGG | 0.441681 | 6.3:+79518577 | MS.gene61436:CDS |
| AAGACGATTCCTATGAAAAC+AGG | 0.449938 | 6.3:+79515128 | MS.gene61436:CDS |
| AGAAGCCCAATTGTCATCAC+TGG | 0.452119 | 6.3:-79516377 | None:intergenic |
| GCATGTGGCATTGGTGCATT+CGG | 0.453125 | 6.3:-79516927 | None:intergenic |
| GTAATACCTCTTAGGATAAG+TGG | 0.454550 | 6.3:+79515454 | MS.gene61436:CDS |
| GGAAGTTCTGTTCTTCCACT+TGG | 0.456507 | 6.3:-79517026 | None:intergenic |
| TGACGATGGGGTTGGAGTCC+AGG | 0.457193 | 6.3:-79518056 | None:intergenic |
| TATGAGGATAGGAGATTCAC+TGG | 0.458069 | 6.3:+79514901 | MS.gene61436:CDS |
| TCCAGTTCAAGGTTGGCAAA+TGG | 0.459544 | 6.3:+79517185 | MS.gene61436:CDS |
| CTACTTTCTTGATCAGATCC+AGG | 0.460798 | 6.3:-79515247 | None:intergenic |
| ATAGGAGATTCACTGGAGAT+AGG | 0.463488 | 6.3:+79514908 | MS.gene61436:CDS |
| TACACTTGGGGCTTGATTTG+GGG | 0.463639 | 6.3:-79517543 | None:intergenic |
| TGCCAACCTTGAACTGGAGC+AGG | 0.464842 | 6.3:-79517180 | None:intergenic |
| GGATTTAAATTTGAGGTGCT+TGG | 0.465186 | 6.3:-79516430 | None:intergenic |
| TGGATTCCCTCCTTTGGGGA+AGG | 0.465352 | 6.3:-79518659 | None:intergenic |
| TCATAATAATGTAGGACAAT+GGG | 0.466865 | 6.3:+79516674 | MS.gene61436:CDS |
| CAATGTGCAGGCAAGGAGTT+GGG | 0.467253 | 6.3:+79518548 | MS.gene61436:CDS |
| GTTGGAGTCCAGGCATGGGA+TGG | 0.467652 | 6.3:-79518046 | None:intergenic |
| CGACGCCAATCATTGACAAC+TGG | 0.467673 | 6.3:-79515307 | None:intergenic |
| TAGGCAATCCATCCCATGCC+TGG | 0.469752 | 6.3:+79518038 | MS.gene61436:CDS |
| TCAGCAGCTGCCTGATAGGC+CGG | 0.471517 | 6.3:+79518615 | MS.gene61436:CDS |
| AGATTCCGACACGGACAATT+GGG | 0.472985 | 6.3:-79516470 | None:intergenic |
| ACTTCAAGAAGGAGGAAATC+AGG | 0.479603 | 6.3:+79514598 | MS.gene61436:CDS |
| TTCAAGCGGATTTAAATTTG+AGG | 0.480362 | 6.3:-79516437 | None:intergenic |
| TGATGGTATGCATGTGGCAT+TGG | 0.480583 | 6.3:-79516936 | None:intergenic |
| GCCACATTATTATATTGCAT+TGG | 0.481046 | 6.3:-79517225 | None:intergenic |
| GAAGGGGTTAGAGCTGGGAG+TGG | 0.481281 | 6.3:-79518641 | None:intergenic |
| AATGGATTTGTTGACCTTGA+CGG | 0.485427 | 6.3:-79517500 | None:intergenic |
| ACCTTCTGTACCCACAGGAC+AGG | 0.486237 | 6.3:+79516899 | MS.gene61436:CDS |
| AACTGCATCCTCTGGCAGCT+TGG | 0.489875 | 6.3:+79516207 | MS.gene61436:CDS |
| CTGAAGGTGGTACATTAGGC+AGG | 0.490324 | 6.3:-79517994 | None:intergenic |
| TCTTTACCTTCTCATGCTCC+AGG | 0.491077 | 6.3:+79516490 | MS.gene61436:CDS |
| TACATTATTATGAGGTGATA+CGG | 0.491099 | 6.3:-79516664 | None:intergenic |
| GGGTGGTGCTGTAAATAGTC+AGG | 0.491868 | 6.3:+79516761 | MS.gene61436:CDS |
| TCTCAAGTTTAATCTCTACT+TGG | 0.492012 | 6.3:-79516246 | None:intergenic |
| TGCCTCAAAGCCTGCTAATG+AGG | 0.492851 | 6.3:+79516959 | MS.gene61436:CDS |
| TCACACGATGTGTAAATTCA+CGG | 0.492952 | 6.3:-79514532 | None:intergenic |
| GTCATACGCTGGGCAGCAAA+TGG | 0.493340 | 6.3:+79518195 | MS.gene61436:CDS |
| AAATCCCAGTGATGACAATT+GGG | 0.494998 | 6.3:+79516372 | MS.gene61436:CDS |
| AGAGAAATTTACCTTGGCAT+TGG | 0.497729 | 6.3:-79518229 | None:intergenic |
| CCCTGTCCTGTGGGTACAGA+AGG | 0.497919 | 6.3:-79516900 | None:intergenic |
| AGCCTCATTAGCAGGCTTTG+AGG | 0.499841 | 6.3:-79516961 | None:intergenic |
| TCCTGTGTGTCTTCGTATGG+AGG | 0.503139 | 6.3:-79515184 | None:intergenic |
| GGCGATTATAAGAGAAGTCC+TGG | 0.504967 | 6.3:+79515277 | MS.gene61436:CDS |
| TTAAGCATGTTTATGAGGAT+AGG | 0.505517 | 6.3:+79514890 | MS.gene61436:CDS |
| AATTGTTGACTAGCAGAAGC+AGG | 0.505821 | 6.3:-79516726 | None:intergenic |
| TGTTGGGCTTGAGGAACTGT+TGG | 0.505985 | 6.3:-79516316 | None:intergenic |
| CCTTGAAAGGATGGCAGGGG+TGG | 0.506197 | 6.3:-79517968 | None:intergenic |
| TCGTGTGAAATCAGTTTCAA+TGG | 0.506647 | 6.3:+79514547 | MS.gene61436:CDS |
| CCAAAACTAGGAGCTGCTGC+TGG | 0.507856 | 6.3:-79516600 | None:intergenic |
| TGGTTGCGGATGCTGCAAAC+TGG | 0.508220 | 6.3:-79516697 | None:intergenic |
| TGGGATGGATTGCCTAGGTT+CGG | 0.509902 | 6.3:-79518031 | None:intergenic |
| AGTCCAGGTGGAAGAAGTCC+TGG | 0.510458 | 6.3:+79515229 | MS.gene61436:CDS |
| CAAGTACTTACCTGCTGTCA+GGG | 0.511056 | 6.3:-79514772 | None:intergenic |
| AAATTTGTGCACACATATTG+TGG | 0.512763 | 6.3:-79513970 | None:intergenic |
| TACTTTCAGGGTCATACGCT+GGG | 0.514743 | 6.3:+79518185 | MS.gene61436:intron |
| TCAATGTGCAGGCAAGGAGT+TGG | 0.515383 | 6.3:+79518547 | MS.gene61436:CDS |
| ATGGGGTTGGAGTCCAGGCA+TGG | 0.516624 | 6.3:-79518051 | None:intergenic |
| CGTTCCTGTGTGTCTTCGTA+TGG | 0.519529 | 6.3:-79515187 | None:intergenic |
| TTTGTTTGCACTAATTGTAG+TGG | 0.521154 | 6.3:+79514000 | MS.gene61436:CDS |
| GATGGATTGCCTAGGTTCGG+AGG | 0.521926 | 6.3:-79518028 | None:intergenic |
| TGGGGTTGGAGTCCAGGCAT+GGG | 0.524458 | 6.3:-79518050 | None:intergenic |
| GGGAACCTTGAAAGGATGGC+AGG | 0.524803 | 6.3:-79517973 | None:intergenic |
| ACACTAGATTGTTGGGCTTG+AGG | 0.528428 | 6.3:-79516325 | None:intergenic |
| TCCTCTCGGTGGTTTGTCAG+AGG | 0.529596 | 6.3:-79514932 | None:intergenic |
| TGTTTACTGCTGACATCGAA+TGG | 0.529956 | 6.3:-79517518 | None:intergenic |
| TTTCAGAGAACTGCATCCTC+TGG | 0.530588 | 6.3:+79516199 | MS.gene61436:intron |
| GGTTTAACTTCTACAGCAGA+AGG | 0.534195 | 6.3:-79517005 | None:intergenic |
| TAGCAGGCTTTGAGGCATGA+TGG | 0.534756 | 6.3:-79516953 | None:intergenic |
| AGGGGTGGAGTCCATGCATG+TGG | 0.538337 | 6.3:-79517953 | None:intergenic |
| CCTTCTGTACCCACAGGACA+GGG | 0.538600 | 6.3:+79516900 | MS.gene61436:CDS |
| TTCCTGCTCCAGTTCAAGGT+TGG | 0.540598 | 6.3:+79517178 | MS.gene61436:CDS |
| GGATGGCACTGAAGTGCCAC+TGG | 0.541437 | 6.3:-79516643 | None:intergenic |
| AAGGTATTAACTCAATGTGC+AGG | 0.541485 | 6.3:+79518536 | MS.gene61436:CDS |
| ATTAGGCAGGGAACCTTGAA+AGG | 0.541766 | 6.3:-79517981 | None:intergenic |
| CAGCAGCTGCCTGATAGGCC+GGG | 0.542449 | 6.3:+79518616 | MS.gene61436:CDS |
| AGGAACGTCGTTATGGTGAC+AGG | 0.542766 | 6.3:+79515203 | MS.gene61436:CDS |
| GAAGCAGGGAACGTTGGTTG+CGG | 0.544995 | 6.3:-79516711 | None:intergenic |
| GTTGGGAATTTCGGAACTGA+GGG | 0.545099 | 6.3:+79518565 | MS.gene61436:CDS |
| CGGGTGGGCTTGAAGAGCCC+AGG | 0.546386 | 6.3:-79515396 | None:intergenic |
| GGCAGGGAACCTTGAAAGGA+TGG | 0.546497 | 6.3:-79517977 | None:intergenic |
| CCTGACTGCAAAACAGGTTG+AGG | 0.547283 | 6.3:-79516349 | None:intergenic |
| AATTCTTTACATTACCCGAA+TGG | 0.547762 | 6.3:-79518679 | None:intergenic |
| CTTGACGGCTGTGAATAACT+TGG | 0.548241 | 6.3:-79517485 | None:intergenic |
| ACCGTGCAGTCTTCAACCCT+GGG | 0.549066 | 6.3:+79517923 | MS.gene61436:intron |
| TCTCATGCTCCAGGAGTCCA+AGG | 0.550042 | 6.3:+79516499 | MS.gene61436:CDS |
| GCAATTCTTTCCCTGACAGC+AGG | 0.550264 | 6.3:+79514762 | MS.gene61436:CDS |
| CCTGTGTGTCTTCGTATGGA+GGG | 0.554844 | 6.3:-79515183 | None:intergenic |
| TTTGTCCCAATTGTCCGTGT+CGG | 0.555220 | 6.3:+79516465 | MS.gene61436:CDS |
| GTATCACCTCATAATAATGT+AGG | 0.555607 | 6.3:+79516666 | MS.gene61436:CDS |
| ATTCGGATGCCCCTGTCCTG+TGG | 0.557545 | 6.3:-79516910 | None:intergenic |
| TTGACAACTGGAGGACGACC+AGG | 0.559582 | 6.3:-79515295 | None:intergenic |
| TGGGTTATCCACCACATGCA+TGG | 0.559865 | 6.3:+79517942 | MS.gene61436:CDS |
| CTCATAATAATGTAGGACAA+TGG | 0.560712 | 6.3:+79516673 | MS.gene61436:CDS |
| TCATGCTATGCAGCATGTAT+GGG | 0.562108 | 6.3:-79518353 | None:intergenic |
| TTCGGATGCCCCTGTCCTGT+GGG | 0.563942 | 6.3:-79516909 | None:intergenic |
| TCTCTAACAGGTCGGACCAC+GGG | 0.565901 | 6.3:-79515415 | None:intergenic |
| ATTAACTCAATGTGCAGGCA+AGG | 0.567515 | 6.3:+79518541 | MS.gene61436:CDS |
| ATGCATGTGGTGGATAACCC+AGG | 0.569423 | 6.3:-79517940 | None:intergenic |
| GATCCAGGACTTCTTCCACC+TGG | 0.571041 | 6.3:-79515232 | None:intergenic |
| ATGGATTGCCTAGGTTCGGA+GGG | 0.571131 | 6.3:-79518027 | None:intergenic |
| AAACATGCTTAACAAACTCT+CGG | 0.571606 | 6.3:-79514879 | None:intergenic |
| TCTAACCCCTTCCCCAAAGG+AGG | 0.572129 | 6.3:+79518652 | MS.gene61436:CDS |
| ATACTTTCAGGGTCATACGC+TGG | 0.572536 | 6.3:+79518184 | MS.gene61436:intron |
| GCATATGATGACGATGGGGT+TGG | 0.573061 | 6.3:-79518064 | None:intergenic |
| CTGTGTCAGTGATGAAGCAT+CGG | 0.574879 | 6.3:-79515506 | None:intergenic |
| TAGCATGAACTTCAATGATA+CGG | 0.575331 | 6.3:+79518368 | MS.gene61436:CDS |
| TGGCAAATGGGTCCTCCGCA+GGG | 0.576406 | 6.3:+79517198 | MS.gene61436:CDS |
| GGGCTCTTCAAGCCCACCCG+TGG | 0.576424 | 6.3:+79515399 | MS.gene61436:CDS |
| TCAACAATTTCCACCGTCAG+TGG | 0.578286 | 6.3:+79516740 | MS.gene61436:CDS |
| GCTGAGAAATTGCCAAAACT+AGG | 0.579045 | 6.3:-79516612 | None:intergenic |
| AGGAGAGTTGAGGCATATCA+GGG | 0.582512 | 6.3:+79515148 | MS.gene61436:CDS |
| ATTACGCACCCTCCGAACCT+AGG | 0.582738 | 6.3:+79518019 | MS.gene61436:CDS |
| AATCTCCATCTGATACTCTA+CGG | 0.582978 | 6.3:-79515336 | None:intergenic |
| GAACTGGAGCAGGAAAGTAC+TGG | 0.583420 | 6.3:-79517170 | None:intergenic |
| ATTTCCTCCTTCTTGAAGTG+CGG | 0.583644 | 6.3:-79514594 | None:intergenic |
| AGGCATGGGATGGATTGCCT+AGG | 0.584344 | 6.3:-79518036 | None:intergenic |
| CTGATGCATATGATGACGAT+GGG | 0.584853 | 6.3:-79518069 | None:intergenic |
| ATCTCTAACAGGTCGGACCA+CGG | 0.585179 | 6.3:-79515416 | None:intergenic |
| CTGGATCTGATCAAGAAAGT+AGG | 0.585551 | 6.3:+79515248 | MS.gene61436:CDS |
| TTTCCGCTGTTTGGTTTGGG+GGG | 0.588613 | 6.3:-79515478 | None:intergenic |
| GAAGACCGTAGAGTATCAGA+TGG | 0.589229 | 6.3:+79515331 | MS.gene61436:CDS |
| CGCCAATCATTGACAACTGG+AGG | 0.591446 | 6.3:-79515304 | None:intergenic |
| GGCTGTGAATAACTTGGCAC+AGG | 0.592606 | 6.3:-79517479 | None:intergenic |
| CGAATGGATTCCCTCCTTTG+GGG | 0.593184 | 6.3:-79518663 | None:intergenic |
| TGGACTCCTGGAGCATGAGA+AGG | 0.593576 | 6.3:-79516496 | None:intergenic |
| GGAACCTTGAAAGGATGGCA+GGG | 0.595041 | 6.3:-79517972 | None:intergenic |
| GGCACTGAAGTGCCACTGGG+TGG | 0.595804 | 6.3:-79516639 | None:intergenic |
| CCCGAACGAGCTAGAGACCT+GGG | 0.598543 | 6.3:+79515379 | MS.gene61436:CDS |
| AGCTCTAACCCCTTCCCCAA+AGG | 0.598694 | 6.3:+79518649 | MS.gene61436:CDS |
| TATGGTGACAGGTCTAGTCC+AGG | 0.598747 | 6.3:+79515214 | MS.gene61436:CDS |
| GCTGTAGAAGTTAAACCAAG+TGG | 0.599496 | 6.3:+79517011 | MS.gene61436:CDS |
| ATGTATGGGAAATTAGATGA+AGG | 0.600017 | 6.3:-79518339 | None:intergenic |
| TCCAATGCAATATAATAATG+TGG | 0.602071 | 6.3:+79517224 | MS.gene61436:CDS |
| GGTGGAGTCCATGCATGTGG+TGG | 0.602942 | 6.3:-79517950 | None:intergenic |
| TAACAGGTCGGACCACGGGT+GGG | 0.604829 | 6.3:-79515411 | None:intergenic |
| AATCTTACGACCTTTCCTCT+CGG | 0.609041 | 6.3:-79514946 | None:intergenic |
| GGAGGGTGCGTAATGCCTGA+AGG | 0.609235 | 6.3:-79518010 | None:intergenic |
| TCCCGAACGAGCTAGAGACC+TGG | 0.613069 | 6.3:+79515378 | MS.gene61436:CDS |
| TGCATTGGAAAGCCCTGCGG+AGG | 0.614805 | 6.3:-79517210 | None:intergenic |
| CTAACAGGTCGGACCACGGG+TGG | 0.615242 | 6.3:-79515412 | None:intergenic |
| GAAGTTACCGCACTTCAAGA+AGG | 0.615478 | 6.3:+79514587 | MS.gene61436:CDS |
| CCAAAATATCTCTAACAGGT+CGG | 0.617155 | 6.3:-79515423 | None:intergenic |
| TTCTCAGCTTTCCCACCCAG+TGG | 0.617961 | 6.3:+79516627 | MS.gene61436:CDS |
| CGATGCTTCATCACTGACAC+AGG | 0.618098 | 6.3:+79515507 | MS.gene61436:CDS |
| CTAGCAGAAGCAGGGAACGT+TGG | 0.618799 | 6.3:-79516717 | None:intergenic |
| AGTTGGGAATTTCGGAACTG+AGG | 0.619777 | 6.3:+79518564 | MS.gene61436:CDS |
| CTTACGACCTTTCCTCTCGG+TGG | 0.622626 | 6.3:-79514943 | None:intergenic |
| TGGAGCAACAGGTTCAGGAT+CGG | 0.626425 | 6.3:-79516296 | None:intergenic |
| TGACAAACCACCGAGAGGAA+AGG | 0.627098 | 6.3:+79514936 | MS.gene61436:CDS |
| GAAGCCCAATTGTCATCACT+GGG | 0.627573 | 6.3:-79516376 | None:intergenic |
| CATGCACCTTCTGTACCCAC+AGG | 0.628811 | 6.3:+79516894 | MS.gene61436:CDS |
| CAAGTTATTCACAGCCGTCA+AGG | 0.628835 | 6.3:+79517486 | MS.gene61436:CDS |
| CAACAATTTCCACCGTCAGT+GGG | 0.629584 | 6.3:+79516741 | MS.gene61436:CDS |
| TCATATGCATCAGTCCCACC+AGG | 0.629975 | 6.3:+79518079 | MS.gene61436:CDS |
| CTAACCCCTTCCCCAAAGGA+GGG | 0.631904 | 6.3:+79518653 | MS.gene61436:CDS |
| CAACTAATATACCAATGCCA+AGG | 0.633465 | 6.3:+79518218 | MS.gene61436:CDS |
| ATCAGATGGAGATTATAAGG+TGG | 0.635684 | 6.3:+79515345 | MS.gene61436:CDS |
| TGAAGGTGGTACATTAGGCA+GGG | 0.636868 | 6.3:-79517993 | None:intergenic |
| CTATGAAAACAGGAGAGTTG+AGG | 0.640259 | 6.3:+79515138 | MS.gene61436:CDS |
| GAACCTTGAAAGGATGGCAG+GGG | 0.640950 | 6.3:-79517971 | None:intergenic |
| TGGGACAAAACAGATTCAAG+CGG | 0.641329 | 6.3:-79516451 | None:intergenic |
| CCCTCCATACGAAGACACAC+AGG | 0.642212 | 6.3:+79515183 | MS.gene61436:CDS |
| TTGAAAGTCACATACACTTG+GGG | 0.645670 | 6.3:-79517555 | None:intergenic |
| CAATTTCCACCGTCAGTGGG+TGG | 0.648109 | 6.3:+79516744 | MS.gene61436:CDS |
| GGGTGCGTAATGCCTGAAGG+TGG | 0.648126 | 6.3:-79518007 | None:intergenic |
| TTATTATGAGGTGATACGGA+TGG | 0.654263 | 6.3:-79516660 | None:intergenic |
| ATTGTTGACTAGCAGAAGCA+GGG | 0.663307 | 6.3:-79516725 | None:intergenic |
| ACAGGATAAACATACCTGGT+GGG | 0.664986 | 6.3:-79518093 | None:intergenic |
| GGTACAGAAGGTGCATGCAA+TGG | 0.666830 | 6.3:-79516888 | None:intergenic |
| ACTGGATACCAAGCTGCCAG+AGG | 0.668169 | 6.3:-79516215 | None:intergenic |
| GTTACCGCACTTCAAGAAGG+AGG | 0.668810 | 6.3:+79514590 | MS.gene61436:CDS |
| TTTACAGCACCACCCACTGA+CGG | 0.672082 | 6.3:-79516753 | None:intergenic |
| GGTGACAGGTCTAGTCCAGG+TGG | 0.685795 | 6.3:+79515217 | MS.gene61436:CDS |
| GATGGCACTGAAGTGCCACT+GGG | 0.689606 | 6.3:-79516642 | None:intergenic |
| ACAGCACCACCCACTGACGG+TGG | 0.689920 | 6.3:-79516750 | None:intergenic |
| AATGCAATATAATAATGTGG+CGG | 0.690651 | 6.3:+79517227 | MS.gene61436:CDS |
| GCACTGAAGTGCCACTGGGT+GGG | 0.693382 | 6.3:-79516638 | None:intergenic |
| ACTGATGCATATGATGACGA+TGG | 0.699854 | 6.3:-79518070 | None:intergenic |
| TATTGCATTGGAAAGCCCTG+CGG | 0.701173 | 6.3:-79517213 | None:intergenic |
| TGCATGTGGTGGATAACCCA+GGG | 0.705185 | 6.3:-79517939 | None:intergenic |
| ACCTCTGACAAACCACCGAG+AGG | 0.706606 | 6.3:+79514931 | MS.gene61436:CDS |
| GAGGCATGATGGTATGCATG+TGG | 0.707104 | 6.3:-79516942 | None:intergenic |
| CTTCTGTACCCACAGGACAG+GGG | 0.715786 | 6.3:+79516901 | MS.gene61436:CDS |
| AGAGTTGAGGCATATCAGGG+AGG | 0.741370 | 6.3:+79515151 | MS.gene61436:CDS |
| AGAAGGTAAAGATTCCGACA+CGG | 0.756226 | 6.3:-79516479 | None:intergenic |
| TGATGCATATGATGACGATG+GGG | 0.769784 | 6.3:-79518068 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACAGTAAATTAAAAA+CGG | - | chr6.3:79516007-79516026 | None:intergenic | 10.0% |
| !!! | AACTTTTTATTAAATAGAAT+AGG | - | chr6.3:79515684-79515703 | None:intergenic | 10.0% |
| !! | TTATGATTAATAATCATAGA+GGG | + | chr6.3:79517332-79517351 | MS.gene61436:intron | 15.0% |
| !!! | AAGAGATTTATTTTAAAGAA+TGG | + | chr6.3:79514729-79514748 | MS.gene61436:CDS | 15.0% |
| !!! | AGAGATTTATTTTAAAGAAT+GGG | + | chr6.3:79514730-79514749 | MS.gene61436:CDS | 15.0% |
| !!! | ATTGTGTTTTATATGAATAA+AGG | - | chr6.3:79518399-79518418 | None:intergenic | 15.0% |
| !!! | TAAAATTGATGATAATAGAT+TGG | + | chr6.3:79518487-79518506 | MS.gene61436:intron | 15.0% |
| !!! | TTGTGTTTTATATGAATAAA+GGG | - | chr6.3:79518398-79518417 | None:intergenic | 15.0% |
| !! | ACAAATTAAAAACATGCATT+TGG | - | chr6.3:79517405-79517424 | None:intergenic | 20.0% |
| !! | ATAAAAAGTTGAATTTCAGA+TGG | + | chr6.3:79515694-79515713 | MS.gene61436:intron | 20.0% |
| !! | CTCTATGATTATTAATCATA+AGG | - | chr6.3:79517333-79517352 | None:intergenic | 20.0% |
| !! | CTTATGATTAATAATCATAG+AGG | + | chr6.3:79517331-79517350 | MS.gene61436:intron | 20.0% |
| !! | GTAAAATATTGTTTAGCTAA+TGG | + | chr6.3:79516805-79516824 | MS.gene61436:intron | 20.0% |
| !!! | AAATGCATGTTTTTAATTTG+TGG | + | chr6.3:79517404-79517423 | MS.gene61436:intron | 20.0% |
| !!! | ATTATTAATCATAAGGTGTT+TGG | - | chr6.3:79517326-79517345 | None:intergenic | 20.0% |
| !!! | TACATTTTAAAATGGCAATA+TGG | - | chr6.3:79515558-79515577 | None:intergenic | 20.0% |
| !!! | TGGGATATTTTATTTATGAA+TGG | + | chr6.3:79515816-79515835 | MS.gene61436:intron | 20.0% |
| ! | AAGCAGAATGAAAAGAAATA+TGG | - | chr6.3:79514653-79514672 | None:intergenic | 25.0% |
| ! | AATGCAATATAATAATGTGG+CGG | + | chr6.3:79517227-79517246 | MS.gene61436:CDS | 25.0% |
| ! | ATCATTCTGATTGTCATATT+TGG | + | chr6.3:79514835-79514854 | MS.gene61436:intron | 25.0% |
| ! | ATGTGACTTTCAATGATTTA+TGG | + | chr6.3:79517565-79517584 | MS.gene61436:intron | 25.0% |
| ! | ATTAACTGACGAATATTAAC+AGG | - | chr6.3:79518114-79518133 | None:intergenic | 25.0% |
| ! | CATTTGTCATATACTTTGTT+TGG | + | chr6.3:79516077-79516096 | MS.gene61436:intron | 25.0% |
| ! | TAAATAATGAATCAACCTCA+CGG | - | chr6.3:79515868-79515887 | None:intergenic | 25.0% |
| ! | TACATTATTATGAGGTGATA+CGG | - | chr6.3:79516667-79516686 | None:intergenic | 25.0% |
| ! | TATTACTTGTCACTAGTAAA+AGG | + | chr6.3:79518517-79518536 | MS.gene61436:CDS | 25.0% |
| ! | TCATAATAATGTAGGACAAT+GGG | + | chr6.3:79516674-79516693 | MS.gene61436:CDS | 25.0% |
| ! | TCCAATGCAATATAATAATG+TGG | + | chr6.3:79517224-79517243 | MS.gene61436:CDS | 25.0% |
| ! | TTTCTTAAAAAAGTGAATCC+TGG | - | chr6.3:79514979-79514998 | None:intergenic | 25.0% |
| !! | ATTTTACATGACAAGTTCAT+TGG | - | chr6.3:79516792-79516811 | None:intergenic | 25.0% |
| !!! | ATAATGATAGCATTAGCTTT+TGG | + | chr6.3:79515796-79515815 | MS.gene61436:intron | 25.0% |
| !!! | ATTTGTTTCTAATCCATACT+TGG | + | chr6.3:79514166-79514185 | MS.gene61436:intron | 25.0% |
| !!! | TAATGATAGCATTAGCTTTT+GGG | + | chr6.3:79515797-79515816 | MS.gene61436:intron | 25.0% |
| !!! | TTATGTTTTCTTTTAAGACG+TGG | + | chr6.3:79516049-79516068 | MS.gene61436:intron | 25.0% |
| !!! | TTTTGTAGTGTTGTTTGTAA+TGG | + | chr6.3:79514277-79514296 | MS.gene61436:intron | 25.0% |
| !!! | TTTTTTTACATGCGATTCAT+TGG | + | chr6.3:79517747-79517766 | MS.gene61436:intron | 25.0% |
| AAACATGCTTAACAAACTCT+CGG | - | chr6.3:79514882-79514901 | None:intergenic | 30.0% | |
| AAATTTGTGCACACATATTG+TGG | - | chr6.3:79513973-79513992 | None:intergenic | 30.0% | |
| AATATGTGTGCACAAATTTC+TGG | + | chr6.3:79513974-79513993 | MS.gene61436:CDS | 30.0% | |
| AATGCAAGATGCTAACTTTA+TGG | - | chr6.3:79517621-79517640 | None:intergenic | 30.0% | |
| AGAACAGACTAAGTAAGAAT+TGG | - | chr6.3:79515080-79515099 | None:intergenic | 30.0% | |
| AGGTGATACACATATTGTAA+TGG | + | chr6.3:79516519-79516538 | MS.gene61436:intron | 30.0% | |
| AGTATCAGATGGAGATTATA+AGG | + | chr6.3:79515342-79515361 | MS.gene61436:CDS | 30.0% | |
| ATCGCAATATTTCAAAAGCT+AGG | - | chr6.3:79518440-79518459 | None:intergenic | 30.0% | |
| ATGTATGGGAAATTAGATGA+AGG | - | chr6.3:79518342-79518361 | None:intergenic | 30.0% | |
| ATGTATTCAACTCAAATCAC+AGG | - | chr6.3:79514084-79514103 | None:intergenic | 30.0% | |
| ATTAACAGGATAAACATACC+TGG | - | chr6.3:79518100-79518119 | None:intergenic | 30.0% | |
| ATTGAAAGTCACATACACTT+GGG | - | chr6.3:79517559-79517578 | None:intergenic | 30.0% | |
| CAAAAAATCAGTAATACTGC+TGG | - | chr6.3:79514136-79514155 | None:intergenic | 30.0% | |
| CATTGTCCTACATTATTATG+AGG | - | chr6.3:79516675-79516694 | None:intergenic | 30.0% | |
| CTAATTGTTAGCCAAACAAT+AGG | - | chr6.3:79517115-79517134 | None:intergenic | 30.0% | |
| CTCATAATAATGTAGGACAA+TGG | + | chr6.3:79516673-79516692 | MS.gene61436:CDS | 30.0% | |
| GAACCATGTTAATACTTTCA+GGG | + | chr6.3:79518173-79518192 | MS.gene61436:intron | 30.0% | |
| GAGAAAATGTAATACCTCTT+AGG | + | chr6.3:79515446-79515465 | MS.gene61436:CDS | 30.0% | |
| GATTGAAGAGAAATTTACCT+TGG | - | chr6.3:79518238-79518257 | None:intergenic | 30.0% | |
| GCCACATTATTATATTGCAT+TGG | - | chr6.3:79517228-79517247 | None:intergenic | 30.0% | |
| GTATCACCTCATAATAATGT+AGG | + | chr6.3:79516666-79516685 | MS.gene61436:CDS | 30.0% | |
| GTATTAATTTCACTCTGTTC+TGG | + | chr6.3:79516852-79516871 | MS.gene61436:intron | 30.0% | |
| TAGCATGAACTTCAATGATA+CGG | + | chr6.3:79518368-79518387 | MS.gene61436:CDS | 30.0% | |
| TCTCAAGTTTAATCTCTACT+TGG | - | chr6.3:79516249-79516268 | None:intergenic | 30.0% | |
| TCTGCAACTATACATGAAAA+CGG | - | chr6.3:79514803-79514822 | None:intergenic | 30.0% | |
| TGAACCATGTTAATACTTTC+AGG | + | chr6.3:79518172-79518191 | MS.gene61436:intron | 30.0% | |
| TGATAAAAAAGCAAACGACT+AGG | - | chr6.3:79518146-79518165 | None:intergenic | 30.0% | |
| TGTATTCAACTCAAATCACA+GGG | - | chr6.3:79514083-79514102 | None:intergenic | 30.0% | |
| TTAAAAAAGTGAATCCTGGA+GGG | - | chr6.3:79514975-79514994 | None:intergenic | 30.0% | |
| TTAAGCATGTTTATGAGGAT+AGG | + | chr6.3:79514890-79514909 | MS.gene61436:CDS | 30.0% | |
| TTACAATATGTGTATCACCT+TGG | - | chr6.3:79516519-79516538 | None:intergenic | 30.0% | |
| TTTGTTTGCACTAATTGTAG+TGG | + | chr6.3:79514000-79514019 | MS.gene61436:CDS | 30.0% | |
| ! | AATACATGTTTCAGAGTACT+TGG | + | chr6.3:79514097-79514116 | MS.gene61436:intron | 30.0% |
| ! | GATGTTTTCAGTTATTCCTT+TGG | + | chr6.3:79515949-79515968 | MS.gene61436:intron | 30.0% |
| ! | GTTTGTTAAGCATGTTTATG+AGG | + | chr6.3:79514885-79514904 | MS.gene61436:CDS | 30.0% |
| ! | TCACAGTATATTGTTTCTCT+TGG | + | chr6.3:79517774-79517793 | MS.gene61436:intron | 30.0% |
| ! | TTCAAGCGGATTTAAATTTG+AGG | - | chr6.3:79516440-79516459 | None:intergenic | 30.0% |
| !! | TGAAAGTATTAACATGGTTC+AGG | - | chr6.3:79518173-79518192 | None:intergenic | 30.0% |
| !!! | AGCTTTTGAAATATTGCGAT+GGG | + | chr6.3:79518440-79518459 | MS.gene61436:intron | 30.0% |
| !!! | TAGCTTTTGAAATATTGCGA+TGG | + | chr6.3:79518439-79518458 | MS.gene61436:intron | 30.0% |
| AAACGCATACTAAGACAATC+TGG | - | chr6.3:79517282-79517301 | None:intergenic | 35.0% | |
| AAATCCCAGTGATGACAATT+GGG | + | chr6.3:79516372-79516391 | MS.gene61436:CDS | 35.0% | |
| AACAGAAGTAAGATTTGCGT+AGG | - | chr6.3:79514326-79514345 | None:intergenic | 35.0% | |
| AAGACGATTCCTATGAAAAC+AGG | + | chr6.3:79515128-79515147 | MS.gene61436:CDS | 35.0% | |
| AATCTCCATCTGATACTCTA+CGG | - | chr6.3:79515339-79515358 | None:intergenic | 35.0% | |
| ACTTGCATATGCCTATTGTT+TGG | + | chr6.3:79517101-79517120 | MS.gene61436:intron | 35.0% | |
| AGAGAAATTTACCTTGGCAT+TGG | - | chr6.3:79518232-79518251 | None:intergenic | 35.0% | |
| AGATTGTCTTAGTATGCGTT+TGG | + | chr6.3:79517281-79517300 | MS.gene61436:intron | 35.0% | |
| ATAGAATAGGCCATTATGAG+TGG | - | chr6.3:79515671-79515690 | None:intergenic | 35.0% | |
| ATCAGATGGAGATTATAAGG+TGG | + | chr6.3:79515345-79515364 | MS.gene61436:CDS | 35.0% | |
| ATCTGGTAAGCTAATCATTC+TGG | - | chr6.3:79517265-79517284 | None:intergenic | 35.0% | |
| CAACTAATATACCAATGCCA+AGG | + | chr6.3:79518218-79518237 | MS.gene61436:CDS | 35.0% | |
| CATTGAAAGTCACATACACT+TGG | - | chr6.3:79517560-79517579 | None:intergenic | 35.0% | |
| CCAAAATATCTCTAACAGGT+CGG | - | chr6.3:79515426-79515445 | None:intergenic | 35.0% | |
| CTTAAAAAAGTGAATCCTGG+AGG | - | chr6.3:79514976-79514995 | None:intergenic | 35.0% | |
| CTTCTTCGAAACTCGTATTT+GGG | + | chr6.3:79518310-79518329 | MS.gene61436:CDS | 35.0% | |
| GAAACATCTCTAATGTCCAA+AGG | - | chr6.3:79515968-79515987 | None:intergenic | 35.0% | |
| GATCAAGAAAGTAGGCAATA+TGG | + | chr6.3:79515256-79515275 | MS.gene61436:CDS | 35.0% | |
| GATCGGCATCAAAATCAATA+AGG | - | chr6.3:79516282-79516301 | None:intergenic | 35.0% | |
| GGCTAACAATTAGTTGTGAT+TGG | + | chr6.3:79517122-79517141 | MS.gene61436:intron | 35.0% | |
| GTAATACCTCTTAGGATAAG+TGG | + | chr6.3:79515454-79515473 | MS.gene61436:CDS | 35.0% | |
| TAAGTAGTCACGATTACTTC+AGG | - | chr6.3:79517050-79517069 | None:intergenic | 35.0% | |
| TACGCAAATCTTACTTCTGT+TGG | + | chr6.3:79514325-79514344 | MS.gene61436:intron | 35.0% | |
| TCACACGATGTGTAAATTCA+CGG | - | chr6.3:79514535-79514554 | None:intergenic | 35.0% | |
| TCACGGAAAAGATTAAGACT+CGG | - | chr6.3:79515851-79515870 | None:intergenic | 35.0% | |
| TCGTGTGAAATCAGTTTCAA+TGG | + | chr6.3:79514547-79514566 | MS.gene61436:CDS | 35.0% | |
| TCTCCCAAAATATCTCTAAC+AGG | - | chr6.3:79515430-79515449 | None:intergenic | 35.0% | |
| TTATTATGAGGTGATACGGA+TGG | - | chr6.3:79516663-79516682 | None:intergenic | 35.0% | |
| TTGAAAGTCACATACACTTG+GGG | - | chr6.3:79517558-79517577 | None:intergenic | 35.0% | |
| ! | AAGGTATTAACTCAATGTGC+AGG | + | chr6.3:79518536-79518555 | MS.gene61436:CDS | 35.0% |
| ! | CACACAAAAACCATGAGTTT+TGG | - | chr6.3:79514503-79514522 | None:intergenic | 35.0% |
| ! | CGACCTGTTAGAGATATTTT+GGG | + | chr6.3:79515424-79515443 | MS.gene61436:CDS | 35.0% |
| ! | GGATTTAAATTTGAGGTGCT+TGG | - | chr6.3:79516433-79516452 | None:intergenic | 35.0% |
| ! | GTTCCAACCTTTTCAATGAT+GGG | - | chr6.3:79517708-79517727 | None:intergenic | 35.0% |
| ! | TGTTCCAACCTTTTCAATGA+TGG | - | chr6.3:79517709-79517728 | None:intergenic | 35.0% |
| !! | AATGGATTTGTTGACCTTGA+CGG | - | chr6.3:79517503-79517522 | None:intergenic | 35.0% |
| !! | TGACCCTGAAAGTATTAACA+TGG | - | chr6.3:79518179-79518198 | None:intergenic | 35.0% |
| !! | TTCTTTTGATGTTGCTTCTG+AGG | + | chr6.3:79516396-79516415 | MS.gene61436:CDS | 35.0% |
| !!! | CATGAGTTTTGGAGAAAAGT+GGG | - | chr6.3:79514492-79514511 | None:intergenic | 35.0% |
| AACAGGATAAACATACCTGG+TGG | - | chr6.3:79518097-79518116 | None:intergenic | 40.0% | |
| AATCTTACGACCTTTCCTCT+CGG | - | chr6.3:79514949-79514968 | None:intergenic | 40.0% | |
| ACAGGATAAACATACCTGGT+GGG | - | chr6.3:79518096-79518115 | None:intergenic | 40.0% | |
| ACTTCAAGAAGGAGGAAATC+AGG | + | chr6.3:79514598-79514617 | MS.gene61436:CDS | 40.0% | |
| AGAAGGTAAAGATTCCGACA+CGG | - | chr6.3:79516482-79516501 | None:intergenic | 40.0% | |
| ATACACTTGGGGCTTGATTT+GGG | - | chr6.3:79517547-79517566 | None:intergenic | 40.0% | |
| ATAGGAGATTCACTGGAGAT+AGG | + | chr6.3:79514908-79514927 | MS.gene61436:CDS | 40.0% | |
| ATGCTCTCCCATCATTGAAA+AGG | + | chr6.3:79517698-79517717 | MS.gene61436:intron | 40.0% | |
| ATTAACTCAATGTGCAGGCA+AGG | + | chr6.3:79518541-79518560 | MS.gene61436:CDS | 40.0% | |
| ATTTCCTCCTTCTTGAAGTG+CGG | - | chr6.3:79514597-79514616 | None:intergenic | 40.0% | |
| CAATTAGTTGTGATTGGTGC+AGG | + | chr6.3:79517128-79517147 | MS.gene61436:intron | 40.0% | |
| CACGGAAAAGATTAAGACTC+GGG | - | chr6.3:79515850-79515869 | None:intergenic | 40.0% | |
| CAGCTTCGATCAAGAATACA+AGG | - | chr6.3:79515930-79515949 | None:intergenic | 40.0% | |
| CTACTTTCTTGATCAGATCC+AGG | - | chr6.3:79515250-79515269 | None:intergenic | 40.0% | |
| CTATGAAAACAGGAGAGTTG+AGG | + | chr6.3:79515138-79515157 | MS.gene61436:CDS | 40.0% | |
| CTGGATCTGATCAAGAAAGT+AGG | + | chr6.3:79515248-79515267 | MS.gene61436:CDS | 40.0% | |
| CTGTTAAAAGCCTCATTAGC+AGG | - | chr6.3:79516972-79516991 | None:intergenic | 40.0% | |
| GAAATCCCAGTGATGACAAT+TGG | + | chr6.3:79516371-79516390 | MS.gene61436:CDS | 40.0% | |
| GCTGAGAAATTGCCAAAACT+AGG | - | chr6.3:79516615-79516634 | None:intergenic | 40.0% | |
| GCTGTAGAAGTTAAACCAAG+TGG | + | chr6.3:79517011-79517030 | MS.gene61436:CDS | 40.0% | |
| GCTTCTTCGAAACTCGTATT+TGG | + | chr6.3:79518309-79518328 | MS.gene61436:CDS | 40.0% | |
| GTAATACTGCTGGATAAAGC+AGG | - | chr6.3:79514126-79514145 | None:intergenic | 40.0% | |
| GTGCTGTAAATAGTCAGGTT+TGG | + | chr6.3:79516766-79516785 | MS.gene61436:intron | 40.0% | |
| GTTCTAATACCGTGTCATGA+AGG | - | chr6.3:79515614-79515633 | None:intergenic | 40.0% | |
| TAAGCTTAAACAGCATGCAC+AGG | - | chr6.3:79518277-79518296 | None:intergenic | 40.0% | |
| TATGAGGATAGGAGATTCAC+TGG | + | chr6.3:79514901-79514920 | MS.gene61436:CDS | 40.0% | |
| TCATGCTATGCAGCATGTAT+GGG | - | chr6.3:79518356-79518375 | None:intergenic | 40.0% | |
| TCTCCCATCATTGAAAAGGT+TGG | + | chr6.3:79517702-79517721 | MS.gene61436:intron | 40.0% | |
| TCTGTCTTTGCCACTCATAA+TGG | + | chr6.3:79515658-79515677 | MS.gene61436:intron | 40.0% | |
| TGGGACAAAACAGATTCAAG+CGG | - | chr6.3:79516454-79516473 | None:intergenic | 40.0% | |
| TGTTTACTGCTGACATCGAA+TGG | - | chr6.3:79517521-79517540 | None:intergenic | 40.0% | |
| TTCATGCTATGCAGCATGTA+TGG | - | chr6.3:79518357-79518376 | None:intergenic | 40.0% | |
| TTGAGGCACACTAGATTGTT+GGG | - | chr6.3:79516335-79516354 | None:intergenic | 40.0% | |
| ! | AATTGTTGACTAGCAGAAGC+AGG | - | chr6.3:79516729-79516748 | None:intergenic | 40.0% |
| ! | ACATGTTTCAGAGTACTTGG+TGG | + | chr6.3:79514100-79514119 | MS.gene61436:intron | 40.0% |
| ! | ACTGATGCATATGATGACGA+TGG | - | chr6.3:79518073-79518092 | None:intergenic | 40.0% |
| ! | ATTGTTGACTAGCAGAAGCA+GGG | - | chr6.3:79516728-79516747 | None:intergenic | 40.0% |
| ! | CCGACCTGTTAGAGATATTT+TGG | + | chr6.3:79515423-79515442 | MS.gene61436:CDS | 40.0% |
| ! | CTCAACTCTCCTGTTTTCAT+AGG | - | chr6.3:79515140-79515159 | None:intergenic | 40.0% |
| ! | CTGATGCATATGATGACGAT+GGG | - | chr6.3:79518072-79518091 | None:intergenic | 40.0% |
| ! | CTTGTGTTGTGTGTTGTTCA+GGG | + | chr6.3:79515100-79515119 | MS.gene61436:intron | 40.0% |
| ! | GACTCATCTGTTTTATCTGC+AGG | + | chr6.3:79516570-79516589 | MS.gene61436:intron | 40.0% |
| ! | GAGTCTTAATCTTTTCCGTG+AGG | + | chr6.3:79515850-79515869 | MS.gene61436:intron | 40.0% |
| ! | GGTTTAACTTCTACAGCAGA+AGG | - | chr6.3:79517008-79517027 | None:intergenic | 40.0% |
| ! | TCTTGTGTTGTGTGTTGTTC+AGG | + | chr6.3:79515099-79515118 | MS.gene61436:intron | 40.0% |
| ! | TGATGCATATGATGACGATG+GGG | - | chr6.3:79518071-79518090 | None:intergenic | 40.0% |
| !! | CCACTTTTCTCCAAAACTCA+TGG | + | chr6.3:79514490-79514509 | MS.gene61436:intron | 40.0% |
| !! | TTGGTGCCAGTAATGTTAAC+AGG | + | chr6.3:79514854-79514873 | MS.gene61436:intron | 40.0% |
| !!! | CCATGAGTTTTGGAGAAAAG+TGG | - | chr6.3:79514493-79514512 | None:intergenic | 40.0% |
| AACTCAGCCACCTCACTAAA+GGG | - | chr6.3:79516136-79516155 | None:intergenic | 45.0% | |
| AAGATTCCGACACGGACAAT+TGG | - | chr6.3:79516474-79516493 | None:intergenic | 45.0% | |
| ACACTAGATTGTTGGGCTTG+AGG | - | chr6.3:79516328-79516347 | None:intergenic | 45.0% | |
| AGAAGCCCAATTGTCATCAC+TGG | - | chr6.3:79516380-79516399 | None:intergenic | 45.0% | |
| AGAGCAGTTCATTGCATGCA+TGG | + | chr6.3:79517876-79517895 | MS.gene61436:intron | 45.0% | |
| AGATTCCGACACGGACAATT+GGG | - | chr6.3:79516473-79516492 | None:intergenic | 45.0% | |
| AGGAGAGTTGAGGCATATCA+GGG | + | chr6.3:79515148-79515167 | MS.gene61436:CDS | 45.0% | |
| AGGCAAGGAGTTGGGAATTT+CGG | + | chr6.3:79518556-79518575 | MS.gene61436:CDS | 45.0% | |
| AGTTGGGAATTTCGGAACTG+AGG | + | chr6.3:79518564-79518583 | MS.gene61436:CDS | 45.0% | |
| AGTTTGCACATGTCTTGCTG+AGG | + | chr6.3:79514190-79514209 | MS.gene61436:intron | 45.0% | |
| ATACTTTCAGGGTCATACGC+TGG | + | chr6.3:79518184-79518203 | MS.gene61436:intron | 45.0% | |
| ATGCATGCAATGAACTGCTC+TGG | - | chr6.3:79517877-79517896 | None:intergenic | 45.0% | |
| ATGCCTGAAGGTGGTACATT+AGG | - | chr6.3:79518001-79518020 | None:intergenic | 45.0% | |
| ATTAGGCAGGGAACCTTGAA+AGG | - | chr6.3:79517984-79518003 | None:intergenic | 45.0% | |
| CAACAATTTCCACCGTCAGT+GGG | + | chr6.3:79516741-79516760 | MS.gene61436:CDS | 45.0% | |
| CAAGTACTTACCTGCTGTCA+GGG | - | chr6.3:79514775-79514794 | None:intergenic | 45.0% | |
| CAAGTTATTCACAGCCGTCA+AGG | + | chr6.3:79517486-79517505 | MS.gene61436:CDS | 45.0% | |
| CATACACTTGGGGCTTGATT+TGG | - | chr6.3:79517548-79517567 | None:intergenic | 45.0% | |
| CATGTGCAAACTGCCAAGTA+TGG | - | chr6.3:79514182-79514201 | None:intergenic | 45.0% | |
| CCAGTTCAAGGTTGGCAAAT+GGG | + | chr6.3:79517186-79517205 | MS.gene61436:CDS | 45.0% | |
| CTGTGTCAGTGATGAAGCAT+CGG | - | chr6.3:79515509-79515528 | None:intergenic | 45.0% | |
| CTTGACGGCTGTGAATAACT+TGG | - | chr6.3:79517488-79517507 | None:intergenic | 45.0% | |
| GAAGCCCAATTGTCATCACT+GGG | - | chr6.3:79516379-79516398 | None:intergenic | 45.0% | |
| GAAGTTACCGCACTTCAAGA+AGG | + | chr6.3:79514587-79514606 | MS.gene61436:CDS | 45.0% | |
| GAGAAAAGTGGGCAGTTGAA+AGG | - | chr6.3:79514481-79514500 | None:intergenic | 45.0% | |
| GGAACTGAGGGAAACATGTT+CGG | + | chr6.3:79518577-79518596 | MS.gene61436:CDS | 45.0% | |
| GGAAGTTCTGTTCTTCCACT+TGG | - | chr6.3:79517029-79517048 | None:intergenic | 45.0% | |
| GGATTTCCTGACTGCAAAAC+AGG | - | chr6.3:79516358-79516377 | None:intergenic | 45.0% | |
| GGCGATTATAAGAGAAGTCC+TGG | + | chr6.3:79515277-79515296 | MS.gene61436:CDS | 45.0% | |
| GTCCTCCAGTTGTCAATGAT+TGG | + | chr6.3:79515302-79515321 | MS.gene61436:CDS | 45.0% | |
| GTTGAGGCACACTAGATTGT+TGG | - | chr6.3:79516336-79516355 | None:intergenic | 45.0% | |
| GTTGGGAATTTCGGAACTGA+GGG | + | chr6.3:79518565-79518584 | MS.gene61436:CDS | 45.0% | |
| TACTTTCAGGGTCATACGCT+GGG | + | chr6.3:79518185-79518204 | MS.gene61436:intron | 45.0% | |
| TACTTTCCTGCTCCAGTTCA+AGG | + | chr6.3:79517174-79517193 | MS.gene61436:CDS | 45.0% | |
| TATTGCATTGGAAAGCCCTG+CGG | - | chr6.3:79517216-79517235 | None:intergenic | 45.0% | |
| TCAACAATTTCCACCGTCAG+TGG | + | chr6.3:79516740-79516759 | MS.gene61436:CDS | 45.0% | |
| TCCAGTTCAAGGTTGGCAAA+TGG | + | chr6.3:79517185-79517204 | MS.gene61436:CDS | 45.0% | |
| TCGGAGCCTGTTAACATTAC+TGG | - | chr6.3:79514863-79514882 | None:intergenic | 45.0% | |
| TCTTTACCTTCTCATGCTCC+AGG | + | chr6.3:79516490-79516509 | MS.gene61436:CDS | 45.0% | |
| TGAAGGTGGTACATTAGGCA+GGG | - | chr6.3:79517996-79518015 | None:intergenic | 45.0% | |
| TGATGGTATGCATGTGGCAT+TGG | - | chr6.3:79516939-79516958 | None:intergenic | 45.0% | |
| TGTGTTCAGCCTTCATGACA+CGG | + | chr6.3:79515602-79515621 | MS.gene61436:intron | 45.0% | |
| TTTCAGAGAACTGCATCCTC+TGG | + | chr6.3:79516199-79516218 | MS.gene61436:intron | 45.0% | |
| TTTGTCCCAATTGTCCGTGT+CGG | + | chr6.3:79516465-79516484 | MS.gene61436:CDS | 45.0% | |
| ! | AGCTTTTCCGCTGTTTGGTT+TGG | - | chr6.3:79515485-79515504 | None:intergenic | 45.0% |
| ! | CTCTACTTGGCTTTCGTTAC+TGG | - | chr6.3:79516236-79516255 | None:intergenic | 45.0% |
| ! | CTCTCTCAAGAAGAGCATGT+CGG | - | chr6.3:79515749-79515768 | None:intergenic | 45.0% |
| ! | GAAGACCGTAGAGTATCAGA+TGG | + | chr6.3:79515331-79515350 | MS.gene61436:CDS | 45.0% |
| ! | GTCGTAAGATTTTACCCTCC+AGG | + | chr6.3:79514958-79514977 | MS.gene61436:intron | 45.0% |
| ! | TACACTTGGGGCTTGATTTG+GGG | - | chr6.3:79517546-79517565 | None:intergenic | 45.0% |
| !! | GCTTTTCCGCTGTTTGGTTT+GGG | - | chr6.3:79515484-79515503 | None:intergenic | 45.0% |
| !! | GGCACGAGTTTTAGCACAAA+AGG | - | chr6.3:79514632-79514651 | None:intergenic | 45.0% |
| !!! | CTTTTCCGCTGTTTGGTTTG+GGG | - | chr6.3:79515483-79515502 | None:intergenic | 45.0% |
| !!! | TTTTCCGCTGTTTGGTTTGG+GGG | - | chr6.3:79515482-79515501 | None:intergenic | 45.0% |
| !!! | TTTTATATTACATTTTAAAA+TGG | - | chr6.3:79515566-79515585 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAATTAAAAAGAA+AGG | - | chr6.3:79517358-79517377 | None:intergenic | 5.0% |
| ACTCAGCCACCTCACTAAAG+GGG | - | chr6.3:79516135-79516154 | None:intergenic | 50.0% | |
| ACTGTTGGAGCAACAGGTTC+AGG | - | chr6.3:79516304-79516323 | None:intergenic | 50.0% | |
| AGAGTTGAGGCATATCAGGG+AGG | + | chr6.3:79515151-79515170 | MS.gene61436:CDS | 50.0% | |
| AGCCTCATTAGCAGGCTTTG+AGG | - | chr6.3:79516964-79516983 | None:intergenic | 50.0% | |
| AGGAACGTCGTTATGGTGAC+AGG | + | chr6.3:79515203-79515222 | MS.gene61436:CDS | 50.0% | |
| ATCTCTAACAGGTCGGACCA+CGG | - | chr6.3:79515419-79515438 | None:intergenic | 50.0% | |
| CAAATCAGCAGCTGCCTGAT+AGG | + | chr6.3:79518611-79518630 | MS.gene61436:CDS | 50.0% | |
| CAACTCAGCCACCTCACTAA+AGG | - | chr6.3:79516137-79516156 | None:intergenic | 50.0% | |
| CAATGTGCAGGCAAGGAGTT+GGG | + | chr6.3:79518548-79518567 | MS.gene61436:CDS | 50.0% | |
| CAGGAGAGTTGAGGCATATC+AGG | + | chr6.3:79515147-79515166 | MS.gene61436:CDS | 50.0% | |
| CCAAAGGAGGGAATCCATTC+GGG | + | chr6.3:79518665-79518684 | MS.gene61436:CDS | 50.0% | |
| CCCAAAGGAGGGAATCCATT+CGG | + | chr6.3:79518664-79518683 | MS.gene61436:CDS | 50.0% | |
| CCCATTTGCCAACCTTGAAC+TGG | - | chr6.3:79517189-79517208 | None:intergenic | 50.0% | |
| CCTGACTGCAAAACAGGTTG+AGG | - | chr6.3:79516352-79516371 | None:intergenic | 50.0% | |
| CCTGTGTGTCTTCGTATGGA+GGG | - | chr6.3:79515186-79515205 | None:intergenic | 50.0% | |
| CCTTCCATGTCTTCCTTGCA+CGG | + | chr6.3:79517806-79517825 | MS.gene61436:intron | 50.0% | |
| CGACGCCAATCATTGACAAC+TGG | - | chr6.3:79515310-79515329 | None:intergenic | 50.0% | |
| CGATGCTTCATCACTGACAC+AGG | + | chr6.3:79515507-79515526 | MS.gene61436:CDS | 50.0% | |
| CGCCAATCATTGACAACTGG+AGG | - | chr6.3:79515307-79515326 | None:intergenic | 50.0% | |
| CGTTCCTGTGTGTCTTCGTA+TGG | - | chr6.3:79515190-79515209 | None:intergenic | 50.0% | |
| CTGAAGGTGGTACATTAGGC+AGG | - | chr6.3:79517997-79518016 | None:intergenic | 50.0% | |
| CTGCCTAATGTACCACCTTC+AGG | + | chr6.3:79517995-79518014 | MS.gene61436:CDS | 50.0% | |
| GAACCTTGAAAGGATGGCAG+GGG | - | chr6.3:79517974-79517993 | None:intergenic | 50.0% | |
| GACACACAGGAACGTCGTTA+TGG | + | chr6.3:79515196-79515215 | MS.gene61436:CDS | 50.0% | |
| GAGGCATGATGGTATGCATG+TGG | - | chr6.3:79516945-79516964 | None:intergenic | 50.0% | |
| GCAAGTACTTACCTGCTGTC+AGG | - | chr6.3:79514776-79514795 | None:intergenic | 50.0% | |
| GCAATTCTTTCCCTGACAGC+AGG | + | chr6.3:79514762-79514781 | MS.gene61436:CDS | 50.0% | |
| GGAACCTTGAAAGGATGGCA+GGG | - | chr6.3:79517975-79517994 | None:intergenic | 50.0% | |
| GGCTGTGAATAACTTGGCAC+AGG | - | chr6.3:79517482-79517501 | None:intergenic | 50.0% | |
| GTTACCGCACTTCAAGAAGG+AGG | + | chr6.3:79514590-79514609 | MS.gene61436:CDS | 50.0% | |
| TATGGTGACAGGTCTAGTCC+AGG | + | chr6.3:79515214-79515233 | MS.gene61436:CDS | 50.0% | |
| TCAATGTGCAGGCAAGGAGT+TGG | + | chr6.3:79518547-79518566 | MS.gene61436:CDS | 50.0% | |
| TCATATGCATCAGTCCCACC+AGG | + | chr6.3:79518079-79518098 | MS.gene61436:CDS | 50.0% | |
| TCCTGTGTGTCTTCGTATGG+AGG | - | chr6.3:79515187-79515206 | None:intergenic | 50.0% | |
| TCTCATCTCCCCCTTTAGTG+AGG | + | chr6.3:79516123-79516142 | MS.gene61436:intron | 50.0% | |
| TGAAGACTGCACGGTTCCTA+CGG | - | chr6.3:79517918-79517937 | None:intergenic | 50.0% | |
| TGACAAACCACCGAGAGGAA+AGG | + | chr6.3:79514936-79514955 | MS.gene61436:CDS | 50.0% | |
| TGAGGAACTGTTGGAGCAAC+AGG | - | chr6.3:79516310-79516329 | None:intergenic | 50.0% | |
| TGCAATGAACTGCTCTGGCT+TGG | - | chr6.3:79517872-79517891 | None:intergenic | 50.0% | |
| TGCCTCAAAGCCTGCTAATG+AGG | + | chr6.3:79516959-79516978 | MS.gene61436:CDS | 50.0% | |
| TGGAGCAACAGGTTCAGGAT+CGG | - | chr6.3:79516299-79516318 | None:intergenic | 50.0% | |
| TGGGTTATCCACCACATGCA+TGG | + | chr6.3:79517942-79517961 | MS.gene61436:CDS | 50.0% | |
| TGTGTATCACCTTGGACTCC+TGG | - | chr6.3:79516511-79516530 | None:intergenic | 50.0% | |
| TGTTGGGCTTGAGGAACTGT+TGG | - | chr6.3:79516319-79516338 | None:intergenic | 50.0% | |
| TTCCTGCTCCAGTTCAAGGT+TGG | + | chr6.3:79517178-79517197 | MS.gene61436:CDS | 50.0% | |
| TTTACAGCACCACCCACTGA+CGG | - | chr6.3:79516756-79516775 | None:intergenic | 50.0% | |
| ! | AGCATGTCGGCATTGAAGCA+TGG | - | chr6.3:79515736-79515755 | None:intergenic | 50.0% |
| ! | ATGGATTGCCTAGGTTCGGA+GGG | - | chr6.3:79518030-79518049 | None:intergenic | 50.0% |
| ! | CCGAATGGATTCCCTCCTTT+GGG | - | chr6.3:79518667-79518686 | None:intergenic | 50.0% |
| ! | CCTCAACCTGTTTTGCAGTC+AGG | + | chr6.3:79516349-79516368 | MS.gene61436:CDS | 50.0% |
| ! | CGAATGGATTCCCTCCTTTG+GGG | - | chr6.3:79518666-79518685 | None:intergenic | 50.0% |
| ! | CTATCAGGCAGCTGCTGATT+TGG | - | chr6.3:79518613-79518632 | None:intergenic | 50.0% |
| ! | GAACTGGAGCAGGAAAGTAC+TGG | - | chr6.3:79517173-79517192 | None:intergenic | 50.0% |
| ! | GCATATGATGACGATGGGGT+TGG | - | chr6.3:79518067-79518086 | None:intergenic | 50.0% |
| ! | GGTACAGAAGGTGCATGCAA+TGG | - | chr6.3:79516891-79516910 | None:intergenic | 50.0% |
| !! | AATGAACTGCTCTGGCTTGG+AGG | - | chr6.3:79517869-79517888 | None:intergenic | 50.0% |
| !! | ATGAACTGCTCTGGCTTGGA+GGG | - | chr6.3:79517868-79517887 | None:intergenic | 50.0% |
| !! | ATGCATGTGGTGGATAACCC+AGG | - | chr6.3:79517943-79517962 | None:intergenic | 50.0% |
| !! | GCATGTGGCATTGGTGCATT+CGG | - | chr6.3:79516930-79516949 | None:intergenic | 50.0% |
| !! | GGGAGTGATGGTGGTACATT+AGG | - | chr6.3:79517839-79517858 | None:intergenic | 50.0% |
| !! | GGGTGGTGCTGTAAATAGTC+AGG | + | chr6.3:79516761-79516780 | MS.gene61436:CDS | 50.0% |
| !! | TAGCAGGCTTTGAGGCATGA+TGG | - | chr6.3:79516956-79516975 | None:intergenic | 50.0% |
| !! | TGCATGTGGTGGATAACCCA+GGG | - | chr6.3:79517942-79517961 | None:intergenic | 50.0% |
| !! | TGGGATGGATTGCCTAGGTT+CGG | - | chr6.3:79518034-79518053 | None:intergenic | 50.0% |
| !! | TTTCCGCTGTTTGGTTTGGG+GGG | - | chr6.3:79515481-79515500 | None:intergenic | 50.0% |
| AACCGTGCAGTCTTCAACCC+TGG | + | chr6.3:79517922-79517941 | MS.gene61436:intron | 55.0% | |
| AACTGCATCCTCTGGCAGCT+TGG | + | chr6.3:79516207-79516226 | MS.gene61436:CDS | 55.0% | |
| AATCCACCACTGCCTACCGT+AGG | + | chr6.3:79517899-79517918 | MS.gene61436:intron | 55.0% | |
| ACCCAGGGTTGAAGACTGCA+CGG | - | chr6.3:79517927-79517946 | None:intergenic | 55.0% | |
| ACCGTGCAGTCTTCAACCCT+GGG | + | chr6.3:79517923-79517942 | MS.gene61436:intron | 55.0% | |
| ACCTCTGACAAACCACCGAG+AGG | + | chr6.3:79514931-79514950 | MS.gene61436:CDS | 55.0% | |
| ACCTTCTGTACCCACAGGAC+AGG | + | chr6.3:79516899-79516918 | MS.gene61436:CDS | 55.0% | |
| ACTGGATACCAAGCTGCCAG+AGG | - | chr6.3:79516218-79516237 | None:intergenic | 55.0% | |
| AGTCCAGGTGGAAGAAGTCC+TGG | + | chr6.3:79515229-79515248 | MS.gene61436:CDS | 55.0% | |
| ATTACGCACCCTCCGAACCT+AGG | + | chr6.3:79518019-79518038 | MS.gene61436:CDS | 55.0% | |
| ATTAGGCAACGCACCGTGCA+AGG | - | chr6.3:79517822-79517841 | None:intergenic | 55.0% | |
| CAATTTCCACCGTCAGTGGG+TGG | + | chr6.3:79516744-79516763 | MS.gene61436:CDS | 55.0% | |
| CATCTCCCCCTTTAGTGAGG+TGG | + | chr6.3:79516126-79516145 | MS.gene61436:intron | 55.0% | |
| CATGCACCTTCTGTACCCAC+AGG | + | chr6.3:79516894-79516913 | MS.gene61436:CDS | 55.0% | |
| CCAAAACTAGGAGCTGCTGC+TGG | - | chr6.3:79516603-79516622 | None:intergenic | 55.0% | |
| CCCTCCATACGAAGACACAC+AGG | + | chr6.3:79515183-79515202 | MS.gene61436:CDS | 55.0% | |
| CCGTGCAAGGAAGACATGGA+AGG | - | chr6.3:79517809-79517828 | None:intergenic | 55.0% | |
| CCTTCTGTACCCACAGGACA+GGG | + | chr6.3:79516900-79516919 | MS.gene61436:CDS | 55.0% | |
| CTAACCCCTTCCCCAAAGGA+GGG | + | chr6.3:79518653-79518672 | MS.gene61436:CDS | 55.0% | |
| CTAGCAGAAGCAGGGAACGT+TGG | - | chr6.3:79516720-79516739 | None:intergenic | 55.0% | |
| CTAGGAGCTGCTGCTGGAAT+AGG | - | chr6.3:79516597-79516616 | None:intergenic | 55.0% | |
| CTCAGCCACCTCACTAAAGG+GGG | - | chr6.3:79516134-79516153 | None:intergenic | 55.0% | |
| CTTACGACCTTTCCTCTCGG+TGG | - | chr6.3:79514946-79514965 | None:intergenic | 55.0% | |
| CTTCTGTACCCACAGGACAG+GGG | + | chr6.3:79516901-79516920 | MS.gene61436:CDS | 55.0% | |
| GATCCAGGACTTCTTCCACC+TGG | - | chr6.3:79515235-79515254 | None:intergenic | 55.0% | |
| GGCAGGGAACCTTGAAAGGA+TGG | - | chr6.3:79517980-79517999 | None:intergenic | 55.0% | |
| GGGAACCTTGAAAGGATGGC+AGG | - | chr6.3:79517976-79517995 | None:intergenic | 55.0% | |
| GGGGGTCCACTTATCCTAAG+AGG | - | chr6.3:79515463-79515482 | None:intergenic | 55.0% | |
| GTCATACGCTGGGCAGCAAA+TGG | + | chr6.3:79518195-79518214 | MS.gene61436:CDS | 55.0% | |
| TAGGCAATCCATCCCATGCC+TGG | + | chr6.3:79518038-79518057 | MS.gene61436:CDS | 55.0% | |
| TCTAACCCCTTCCCCAAAGG+AGG | + | chr6.3:79518652-79518671 | MS.gene61436:CDS | 55.0% | |
| TCTCATGCTCCAGGAGTCCA+AGG | + | chr6.3:79516499-79516518 | MS.gene61436:CDS | 55.0% | |
| TCTCTAACAGGTCGGACCAC+GGG | - | chr6.3:79515418-79515437 | None:intergenic | 55.0% | |
| TGCCAACCTTGAACTGGAGC+AGG | - | chr6.3:79517183-79517202 | None:intergenic | 55.0% | |
| TGGACTCCTGGAGCATGAGA+AGG | - | chr6.3:79516499-79516518 | None:intergenic | 55.0% | |
| TGGTTGCGGATGCTGCAAAC+TGG | - | chr6.3:79516700-79516719 | None:intergenic | 55.0% | |
| TTAGAGCTGGGAGTGGTTCC+CGG | - | chr6.3:79518637-79518656 | None:intergenic | 55.0% | |
| TTCTCAGCTTTCCCACCCAG+TGG | + | chr6.3:79516627-79516646 | MS.gene61436:CDS | 55.0% | |
| TTGACAACTGGAGGACGACC+AGG | - | chr6.3:79515298-79515317 | None:intergenic | 55.0% | |
| TTGGGGAAGGGGTTAGAGCT+GGG | - | chr6.3:79518649-79518668 | None:intergenic | 55.0% | |
| TTTGGGGAAGGGGTTAGAGC+TGG | - | chr6.3:79518650-79518669 | None:intergenic | 55.0% | |
| ! | AGCTCTAACCCCTTCCCCAA+AGG | + | chr6.3:79518649-79518668 | MS.gene61436:CDS | 55.0% |
| ! | CCAGCAGCAGCTCCTAGTTT+TGG | + | chr6.3:79516600-79516619 | MS.gene61436:CDS | 55.0% |
| ! | CCCGAATGGATTCCCTCCTT+TGG | - | chr6.3:79518668-79518687 | None:intergenic | 55.0% |
| ! | GAAGCAGGGAACGTTGGTTG+CGG | - | chr6.3:79516714-79516733 | None:intergenic | 55.0% |
| ! | GATGGCACTGAAGTGCCACT+GGG | - | chr6.3:79516645-79516664 | None:intergenic | 55.0% |
| ! | GATTCCCTCCTTTGGGGAAG+GGG | - | chr6.3:79518660-79518679 | None:intergenic | 55.0% |
| ! | GGATTCCCTCCTTTGGGGAA+GGG | - | chr6.3:79518661-79518680 | None:intergenic | 55.0% |
| ! | TCCTCTCGGTGGTTTGTCAG+AGG | - | chr6.3:79514935-79514954 | None:intergenic | 55.0% |
| ! | TCGGCAGCTTTTCCGCTGTT+TGG | - | chr6.3:79515490-79515509 | None:intergenic | 55.0% |
| ! | TGGATTCCCTCCTTTGGGGA+AGG | - | chr6.3:79518662-79518681 | None:intergenic | 55.0% |
| !! | AGGCATGGGATGGATTGCCT+AGG | - | chr6.3:79518039-79518058 | None:intergenic | 55.0% |
| !! | GATGGATTGCCTAGGTTCGG+AGG | - | chr6.3:79518031-79518050 | None:intergenic | 55.0% |
| !! | TCTGGCTTGGAGGGTGCATT+GGG | - | chr6.3:79517859-79517878 | None:intergenic | 55.0% |
| ACGGTTCCTACGGTAGGCAG+TGG | - | chr6.3:79517908-79517927 | None:intergenic | 60.0% | |
| ATGGGGTTGGAGTCCAGGCA+TGG | - | chr6.3:79518054-79518073 | None:intergenic | 60.0% | |
| ATTCGGATGCCCCTGTCCTG+TGG | - | chr6.3:79516913-79516932 | None:intergenic | 60.0% | |
| CCACCCCTGCCATCCTTTCA+AGG | + | chr6.3:79517968-79517987 | MS.gene61436:CDS | 60.0% | |
| CCCGAACGAGCTAGAGACCT+GGG | + | chr6.3:79515379-79515398 | MS.gene61436:CDS | 60.0% | |
| CCCTGTCCTGTGGGTACAGA+AGG | - | chr6.3:79516903-79516922 | None:intergenic | 60.0% | |
| CCTTGAAAGGATGGCAGGGG+TGG | - | chr6.3:79517971-79517990 | None:intergenic | 60.0% | |
| CGCACCGTGCAAGGAAGACA+TGG | - | chr6.3:79517813-79517832 | None:intergenic | 60.0% | |
| GAAGGGGTTAGAGCTGGGAG+TGG | - | chr6.3:79518644-79518663 | None:intergenic | 60.0% | |
| GACTGCACGGTTCCTACGGT+AGG | - | chr6.3:79517914-79517933 | None:intergenic | 60.0% | |
| GGACCCCCCAAACCAAACAG+CGG | + | chr6.3:79515475-79515494 | MS.gene61436:CDS | 60.0% | |
| GGGTGCATTGGGAGTGATGG+TGG | - | chr6.3:79517848-79517867 | None:intergenic | 60.0% | |
| GGGTGCGTAATGCCTGAAGG+TGG | - | chr6.3:79518010-79518029 | None:intergenic | 60.0% | |
| GGTGACAGGTCTAGTCCAGG+TGG | + | chr6.3:79515217-79515236 | MS.gene61436:CDS | 60.0% | |
| GTTCCTACGGTAGGCAGTGG+TGG | - | chr6.3:79517905-79517924 | None:intergenic | 60.0% | |
| GTTGGAGTCCAGGCATGGGA+TGG | - | chr6.3:79518049-79518068 | None:intergenic | 60.0% | |
| TAACAGGTCGGACCACGGGT+GGG | - | chr6.3:79515414-79515433 | None:intergenic | 60.0% | |
| TCAGCAGCTGCCTGATAGGC+CGG | + | chr6.3:79518615-79518634 | MS.gene61436:CDS | 60.0% | |
| TCCCGAACGAGCTAGAGACC+TGG | + | chr6.3:79515378-79515397 | MS.gene61436:CDS | 60.0% | |
| TGACGATGGGGTTGGAGTCC+AGG | - | chr6.3:79518059-79518078 | None:intergenic | 60.0% | |
| TGCATTGGAAAGCCCTGCGG+AGG | - | chr6.3:79517213-79517232 | None:intergenic | 60.0% | |
| TGGCAAATGGGTCCTCCGCA+GGG | + | chr6.3:79517198-79517217 | MS.gene61436:CDS | 60.0% | |
| TGGGGTTGGAGTCCAGGCAT+GGG | - | chr6.3:79518053-79518072 | None:intergenic | 60.0% | |
| TTCGGATGCCCCTGTCCTGT+GGG | - | chr6.3:79516912-79516931 | None:intergenic | 60.0% | |
| TTGGCAAATGGGTCCTCCGC+AGG | + | chr6.3:79517197-79517216 | MS.gene61436:CDS | 60.0% | |
| ! | CCCAGGTCTCTAGCTCGTTC+GGG | - | chr6.3:79515382-79515401 | None:intergenic | 60.0% |
| ! | GCACTGAAGTGCCACTGGGT+GGG | - | chr6.3:79516641-79516660 | None:intergenic | 60.0% |
| ! | GCCCAGGTCTCTAGCTCGTT+CGG | - | chr6.3:79515383-79515402 | None:intergenic | 60.0% |
| ! | GGAGGGTGCATTGGGAGTGA+TGG | - | chr6.3:79517851-79517870 | None:intergenic | 60.0% |
| ! | GGAGGGTGCGTAATGCCTGA+AGG | - | chr6.3:79518013-79518032 | None:intergenic | 60.0% |
| ! | GGATGGCACTGAAGTGCCAC+TGG | - | chr6.3:79516646-79516665 | None:intergenic | 60.0% |
| !! | CTCTGGCTTGGAGGGTGCAT+TGG | - | chr6.3:79517860-79517879 | None:intergenic | 60.0% |
| ACAGCACCACCCACTGACGG+TGG | - | chr6.3:79516753-79516772 | None:intergenic | 65.0% | |
| CAGCAGCTGCCTGATAGGCC+GGG | + | chr6.3:79518616-79518635 | MS.gene61436:CDS | 65.0% | |
| CTAACAGGTCGGACCACGGG+TGG | - | chr6.3:79515415-79515434 | None:intergenic | 65.0% | |
| GGAGTGGTTCCCGGCCTATC+AGG | - | chr6.3:79518628-79518647 | None:intergenic | 65.0% | |
| ! | GGCACTGAAGTGCCACTGGG+TGG | - | chr6.3:79516642-79516661 | None:intergenic | 65.0% |
| GGGCTCTTCAAGCCCACCCG+TGG | + | chr6.3:79515399-79515418 | MS.gene61436:CDS | 70.0% | |
| ! | CGGGTGGGCTTGAAGAGCCC+AGG | - | chr6.3:79515399-79515418 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 79513967 | 79518690 | 79513967 | ID=MS.gene61436 |
| chr6.3 | mRNA | 79513967 | 79518690 | 79513967 | ID=MS.gene61436.t1;Parent=MS.gene61436 |
| chr6.3 | exon | 79513967 | 79514028 | 79513967 | ID=MS.gene61436.t1.exon1;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79513967 | 79514028 | 79513967 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79514532 | 79514619 | 79514532 | ID=MS.gene61436.t1.exon2;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79514532 | 79514619 | 79514532 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79514722 | 79514783 | 79514722 | ID=MS.gene61436.t1.exon3;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79514722 | 79514783 | 79514722 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79514864 | 79514957 | 79514864 | ID=MS.gene61436.t1.exon4;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79514864 | 79514957 | 79514864 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79515121 | 79515528 | 79515121 | ID=MS.gene61436.t1.exon5;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79515121 | 79515528 | 79515121 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79516205 | 79516520 | 79516205 | ID=MS.gene61436.t1.exon6;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79516205 | 79516520 | 79516205 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79516592 | 79516782 | 79516592 | ID=MS.gene61436.t1.exon7;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79516592 | 79516782 | 79516592 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79516888 | 79517052 | 79516888 | ID=MS.gene61436.t1.exon8;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79516888 | 79517052 | 79516888 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79517150 | 79517248 | 79517150 | ID=MS.gene61436.t1.exon9;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79517150 | 79517248 | 79517150 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79517479 | 79517562 | 79517479 | ID=MS.gene61436.t1.exon10;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79517479 | 79517562 | 79517479 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79517932 | 79518100 | 79517932 | ID=MS.gene61436.t1.exon11;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79517932 | 79518100 | 79517932 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79518194 | 79518239 | 79518194 | ID=MS.gene61436.t1.exon12;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79518194 | 79518239 | 79518194 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79518293 | 79518389 | 79518293 | ID=MS.gene61436.t1.exon13;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79518293 | 79518389 | 79518293 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| chr6.3 | exon | 79518505 | 79518690 | 79518505 | ID=MS.gene61436.t1.exon14;Parent=MS.gene61436.t1 |
| chr6.3 | CDS | 79518505 | 79518690 | 79518505 | ID=cds.MS.gene61436.t1;Parent=MS.gene61436.t1 |
| Gene Sequence |
| Protein sequence |
