Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049293.t1 | CAB65279.1 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 1.00E-205 | 725.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049293.t1 | Q8W013 | 38.7 | 344 | 204 | 5 | 3 | 342 | 7 | 347 | 5.1e-60 | 233.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049293.t1 | Q9SBS0 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 7.5e-206 | 725.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049293 | MS.gene049294 | 0.840606 | 7.86E-58 | -1.69E-46 |
| MS.gene049293 | MS.gene051902 | -0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene049293 | MS.gene052309 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene054946 | 0.957741 | 1.30E-115 | -1.69E-46 |
| MS.gene049293 | MS.gene056068 | -0.83365 | 4.72E-56 | -1.69E-46 |
| MS.gene049293 | MS.gene057555 | -0.809016 | 2.33E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene05954 | -0.803205 | 3.89E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene060365 | -0.81284 | 3.46E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene060634 | 0.810162 | 1.32E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene060879 | -0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene061719 | -0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene061920 | -0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene062501 | -0.815041 | 1.13E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene063245 | -0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene063247 | -0.801909 | 7.21E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene06416 | 0.932464 | 8.19E-95 | -1.69E-46 |
| MS.gene049293 | MS.gene064845 | -0.851542 | 8.30E-61 | -1.69E-46 |
| MS.gene049293 | MS.gene064846 | -0.84812 | 7.51E-60 | -1.69E-46 |
| MS.gene049293 | MS.gene067151 | -0.80069 | 1.28E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene06982 | -0.81079 | 9.67E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene070011 | -0.825418 | 4.74E-54 | -1.69E-46 |
| MS.gene049293 | MS.gene071570 | -0.817937 | 2.54E-52 | -1.69E-46 |
| MS.gene049293 | MS.gene071711 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene049293 | MS.gene071975 | -0.824901 | 6.28E-54 | -1.69E-46 |
| MS.gene049293 | MS.gene072950 | -0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene072951 | -0.809343 | 1.98E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene072955 | -0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene073833 | -0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene25207 | -0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene25259 | -0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene27134 | -0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene049293 | MS.gene27227 | -0.828253 | 9.96E-55 | -1.69E-46 |
| MS.gene049293 | MS.gene27314 | -0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene28922 | 0.802094 | 6.60E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene28980 | -0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene29612 | -0.82852 | 8.59E-55 | -1.69E-46 |
| MS.gene049293 | MS.gene30246 | -0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene33045 | -0.803139 | 4.02E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene35530 | -0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene36046 | -0.820922 | 5.31E-53 | -1.69E-46 |
| MS.gene049293 | MS.gene36229 | -0.805887 | 1.07E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene36231 | -0.801131 | 1.04E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene39213 | -0.843318 | 1.51E-58 | -1.69E-46 |
| MS.gene049293 | MS.gene39695 | 0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene40838 | -0.831112 | 2.01E-55 | -1.69E-46 |
| MS.gene049293 | MS.gene40882 | -0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene049293 | MS.gene41434 | -0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene43109 | -0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene45219 | -0.805328 | 1.41E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene45340 | -0.812165 | 4.86E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene45652 | -0.804237 | 2.38E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene49310 | -0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene50528 | -0.83919 | 1.84E-57 | -1.69E-46 |
| MS.gene049293 | MS.gene50599 | 0.810018 | 1.42E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene51893 | 0.80227 | 6.07E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene52808 | -0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene54473 | -0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene56124 | -0.811083 | 8.36E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene56924 | -0.808792 | 2.60E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene58928 | 0.812574 | 3.96E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene59540 | -0.818584 | 1.82E-52 | -1.69E-46 |
| MS.gene049293 | MS.gene60357 | -0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene61436 | 0.801928 | 7.14E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene62681 | -0.804151 | 2.48E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene71239 | -0.800495 | 1.40E-48 | -1.69E-46 |
| MS.gene049293 | MS.gene72130 | -0.804994 | 1.65E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene74082 | -0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene049293 | MS.gene80668 | -0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene80795 | -0.827546 | 1.47E-54 | -1.69E-46 |
| MS.gene049293 | MS.gene82881 | -0.802078 | 6.65E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene82983 | -0.823807 | 1.14E-53 | -1.69E-46 |
| MS.gene049293 | MS.gene83091 | -0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene89049 | -0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene92491 | -0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene92849 | -0.812334 | 4.47E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene93202 | -0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene93478 | -0.807787 | 4.26E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene95486 | -0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene95676 | -0.815617 | 8.43E-52 | -1.69E-46 |
| MS.gene049293 | MS.gene97026 | 0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene049293 | MS.gene97738 | -0.836789 | 7.61E-57 | -1.69E-46 |
| MS.gene049293 | MS.gene99465 | -0.827698 | 1.35E-54 | -1.69E-46 |
| MS.gene049293 | MS.gene99848 | -0.829748 | 4.33E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049293.t1 | MTR_3g096070 | 89.665 | 358 | 14 | 1 | 1 | 358 | 1 | 335 | 0.0 | 658 |
| MS.gene049293.t1 | MTR_3g096050 | 86.592 | 358 | 48 | 0 | 1 | 358 | 1 | 358 | 0.0 | 647 |
| MS.gene049293.t1 | MTR_3g096050 | 87.405 | 262 | 33 | 0 | 1 | 262 | 1 | 262 | 1.14e-169 | 473 |
| MS.gene049293.t1 | MTR_2g072790 | 59.654 | 347 | 139 | 1 | 12 | 358 | 9 | 354 | 1.07e-161 | 456 |
| MS.gene049293.t1 | MTR_3g092900 | 38.000 | 350 | 208 | 7 | 14 | 358 | 18 | 363 | 4.57e-70 | 223 |
| MS.gene049293.t1 | MTR_5g098170 | 36.080 | 352 | 213 | 8 | 14 | 358 | 17 | 363 | 2.13e-66 | 214 |
| MS.gene049293.t1 | MTR_0591s0010 | 36.494 | 348 | 206 | 7 | 20 | 358 | 36 | 377 | 2.17e-66 | 214 |
| MS.gene049293.t1 | MTR_7g118320 | 33.913 | 345 | 219 | 4 | 20 | 358 | 21 | 362 | 7.12e-66 | 213 |
| MS.gene049293.t1 | MTR_8g068750 | 34.493 | 345 | 217 | 5 | 20 | 358 | 36 | 377 | 5.45e-64 | 208 |
| MS.gene049293.t1 | MTR_7g118300 | 33.243 | 367 | 233 | 6 | 1 | 358 | 12 | 375 | 1.43e-61 | 202 |
| MS.gene049293.t1 | MTR_8g068690 | 35.168 | 327 | 201 | 6 | 20 | 339 | 35 | 357 | 3.84e-61 | 201 |
| MS.gene049293.t1 | MTR_1g096310 | 36.170 | 376 | 209 | 11 | 2 | 358 | 9 | 372 | 7.96e-61 | 200 |
| MS.gene049293.t1 | MTR_7g011900 | 37.183 | 355 | 203 | 10 | 2 | 344 | 9 | 355 | 5.05e-60 | 197 |
| MS.gene049293.t1 | MTR_7g011990 | 36.592 | 358 | 200 | 11 | 3 | 344 | 6 | 352 | 1.05e-59 | 197 |
| MS.gene049293.t1 | MTR_7g012070 | 35.165 | 364 | 213 | 9 | 2 | 347 | 9 | 367 | 6.02e-59 | 195 |
| MS.gene049293.t1 | MTR_8g068870 | 32.479 | 351 | 228 | 5 | 14 | 358 | 16 | 363 | 1.57e-58 | 193 |
| MS.gene049293.t1 | MTR_7g012020 | 35.694 | 353 | 211 | 8 | 2 | 344 | 8 | 354 | 2.04e-58 | 193 |
| MS.gene049293.t1 | MTR_2g055940 | 34.097 | 349 | 217 | 8 | 3 | 344 | 6 | 348 | 7.68e-58 | 192 |
| MS.gene049293.t1 | MTR_1g036490 | 35.813 | 363 | 213 | 13 | 9 | 358 | 15 | 370 | 2.11e-57 | 191 |
| MS.gene049293.t1 | MTR_6g078850 | 33.333 | 351 | 223 | 5 | 14 | 356 | 34 | 381 | 1.94e-56 | 192 |
| MS.gene049293.t1 | MTR_1g036460 | 35.635 | 362 | 215 | 11 | 9 | 358 | 15 | 370 | 2.04e-56 | 188 |
| MS.gene049293.t1 | MTR_7g012090 | 38.811 | 286 | 159 | 6 | 73 | 347 | 87 | 367 | 2.10e-56 | 188 |
| MS.gene049293.t1 | MTR_7g012040 | 35.833 | 360 | 210 | 11 | 2 | 347 | 8 | 360 | 3.00e-56 | 187 |
| MS.gene049293.t1 | MTR_3g021430 | 37.818 | 275 | 163 | 3 | 73 | 343 | 71 | 341 | 1.85e-54 | 183 |
| MS.gene049293.t1 | MTR_1g036510 | 38.163 | 283 | 158 | 5 | 70 | 343 | 93 | 367 | 2.05e-54 | 183 |
| MS.gene049293.t1 | MTR_8g024160 | 35.606 | 264 | 167 | 3 | 95 | 358 | 68 | 328 | 2.39e-52 | 176 |
| MS.gene049293.t1 | MTR_3g021440 | 36.770 | 291 | 175 | 4 | 73 | 358 | 84 | 370 | 4.80e-52 | 177 |
| MS.gene049293.t1 | MTR_8g068730 | 31.884 | 345 | 194 | 6 | 20 | 358 | 36 | 345 | 7.62e-52 | 176 |
| MS.gene049293.t1 | MTR_8g068570 | 33.861 | 316 | 169 | 7 | 20 | 327 | 36 | 319 | 7.49e-51 | 172 |
| MS.gene049293.t1 | MTR_0017s0100 | 31.831 | 355 | 229 | 9 | 8 | 355 | 17 | 365 | 7.12e-48 | 166 |
| MS.gene049293.t1 | MTR_4g038440 | 31.461 | 356 | 229 | 10 | 8 | 355 | 17 | 365 | 4.10e-45 | 159 |
| MS.gene049293.t1 | MTR_0079s0070 | 31.818 | 330 | 213 | 9 | 31 | 355 | 9 | 331 | 3.07e-44 | 155 |
| MS.gene049293.t1 | MTR_8g068690 | 35.039 | 254 | 155 | 5 | 20 | 266 | 35 | 285 | 1.27e-42 | 150 |
| MS.gene049293.t1 | MTR_7g012020 | 35.821 | 268 | 158 | 7 | 2 | 259 | 8 | 271 | 1.09e-37 | 137 |
| MS.gene049293.t1 | MTR_8g068600 | 34.348 | 230 | 143 | 3 | 37 | 260 | 27 | 254 | 1.75e-36 | 134 |
| MS.gene049293.t1 | MTR_8g068740 | 31.128 | 257 | 137 | 5 | 20 | 270 | 36 | 258 | 1.50e-35 | 131 |
| MS.gene049293.t1 | MTR_1g050220 | 31.650 | 297 | 146 | 8 | 51 | 342 | 43 | 287 | 1.90e-35 | 131 |
| MS.gene049293.t1 | MTR_3g083620 | 29.773 | 309 | 202 | 8 | 36 | 339 | 44 | 342 | 3.69e-35 | 132 |
| MS.gene049293.t1 | MTR_5g074600 | 27.500 | 320 | 218 | 7 | 31 | 343 | 32 | 344 | 1.53e-33 | 127 |
| MS.gene049293.t1 | MTR_7g024520 | 28.529 | 340 | 211 | 11 | 29 | 356 | 29 | 348 | 3.51e-33 | 126 |
| MS.gene049293.t1 | MTR_5g074680 | 27.221 | 349 | 236 | 10 | 2 | 343 | 8 | 345 | 6.37e-33 | 126 |
| MS.gene049293.t1 | MTR_1g036510 | 38.806 | 201 | 108 | 4 | 70 | 261 | 93 | 287 | 1.59e-32 | 123 |
| MS.gene049293.t1 | MTR_7g014570 | 28.612 | 353 | 233 | 11 | 10 | 355 | 9 | 349 | 4.69e-31 | 120 |
| MS.gene049293.t1 | MTR_4g079160 | 28.080 | 349 | 228 | 11 | 12 | 346 | 4 | 343 | 7.74e-31 | 120 |
| MS.gene049293.t1 | MTR_5g074580 | 27.350 | 351 | 233 | 11 | 2 | 343 | 8 | 345 | 1.49e-30 | 119 |
| MS.gene049293.t1 | MTR_7g024500 | 28.152 | 341 | 211 | 11 | 29 | 356 | 29 | 348 | 6.66e-30 | 117 |
| MS.gene049293.t1 | MTR_4g088340 | 27.964 | 329 | 210 | 9 | 29 | 345 | 7 | 320 | 1.41e-29 | 116 |
| MS.gene049293.t1 | MTR_7g012020 | 34.008 | 247 | 149 | 7 | 2 | 238 | 8 | 250 | 2.20e-29 | 114 |
| MS.gene049293.t1 | MTR_1g076940 | 26.113 | 337 | 227 | 10 | 31 | 355 | 32 | 358 | 2.56e-29 | 116 |
| MS.gene049293.t1 | MTR_4g088345 | 29.483 | 329 | 205 | 12 | 29 | 345 | 30 | 343 | 3.07e-29 | 115 |
| MS.gene049293.t1 | MTR_4g038440 | 31.008 | 258 | 168 | 6 | 8 | 259 | 17 | 270 | 1.19e-27 | 109 |
| MS.gene049293.t1 | MTR_7g014510 | 28.529 | 333 | 207 | 11 | 31 | 350 | 32 | 346 | 1.52e-27 | 111 |
| MS.gene049293.t1 | MTR_4g033015 | 28.116 | 345 | 228 | 10 | 24 | 355 | 23 | 360 | 1.65e-27 | 111 |
| MS.gene049293.t1 | MTR_5g074540 | 25.862 | 348 | 224 | 11 | 2 | 343 | 7 | 326 | 2.78e-27 | 110 |
| MS.gene049293.t1 | MTR_4g033200 | 27.826 | 345 | 229 | 10 | 24 | 355 | 23 | 360 | 1.63e-26 | 108 |
| MS.gene049293.t1 | MTR_4g088200 | 26.347 | 334 | 230 | 10 | 31 | 355 | 32 | 358 | 6.74e-26 | 107 |
| MS.gene049293.t1 | MTR_8g068620 | 46.364 | 110 | 58 | 1 | 150 | 259 | 2 | 110 | 1.18e-25 | 100 |
| MS.gene049293.t1 | MTR_4g033150 | 27.181 | 298 | 201 | 8 | 31 | 317 | 32 | 324 | 1.14e-23 | 100 |
| MS.gene049293.t1 | MTR_5g074610 | 26.101 | 318 | 196 | 10 | 31 | 343 | 28 | 311 | 1.75e-23 | 99.8 |
| MS.gene049293.t1 | MTR_1g036510 | 36.517 | 178 | 98 | 4 | 70 | 238 | 93 | 264 | 2.29e-23 | 98.2 |
| MS.gene049293.t1 | MTR_4g088190 | 26.706 | 337 | 228 | 9 | 31 | 355 | 32 | 361 | 3.44e-22 | 96.7 |
| MS.gene049293.t1 | MTR_4g033170 | 25.987 | 304 | 211 | 9 | 24 | 319 | 23 | 320 | 1.84e-20 | 91.7 |
| MS.gene049293.t1 | MTR_4g033085 | 26.336 | 262 | 182 | 8 | 24 | 280 | 23 | 278 | 9.48e-18 | 84.0 |
| MS.gene049293.t1 | MTR_1g076930 | 26.250 | 240 | 159 | 8 | 29 | 259 | 7 | 237 | 2.24e-15 | 75.1 |
| MS.gene049293.t1 | MTR_8g068760 | 37.000 | 100 | 62 | 1 | 259 | 358 | 135 | 233 | 2.69e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049293.t1 | AT3G53140 | 57.835 | 351 | 144 | 1 | 12 | 358 | 9 | 359 | 1.50e-153 | 436 |
| MS.gene049293.t1 | AT5G54160 | 40.303 | 330 | 188 | 6 | 14 | 339 | 18 | 342 | 3.69e-72 | 229 |
| MS.gene049293.t1 | AT1G33030 | 34.111 | 343 | 217 | 6 | 23 | 358 | 10 | 350 | 6.37e-60 | 197 |
| MS.gene049293.t1 | AT1G51990 | 35.274 | 292 | 182 | 4 | 53 | 339 | 54 | 343 | 1.73e-58 | 193 |
| MS.gene049293.t1 | AT1G51990 | 35.616 | 292 | 181 | 4 | 53 | 339 | 54 | 343 | 6.29e-58 | 192 |
| MS.gene049293.t1 | AT1G77520 | 32.000 | 350 | 221 | 8 | 22 | 358 | 36 | 381 | 3.46e-54 | 183 |
| MS.gene049293.t1 | AT1G77530 | 34.943 | 352 | 208 | 10 | 22 | 358 | 36 | 381 | 3.19e-46 | 162 |
| MS.gene049293.t1 | AT1G21100 | 33.241 | 361 | 226 | 10 | 8 | 358 | 18 | 373 | 9.50e-44 | 155 |
| MS.gene049293.t1 | AT5G53810 | 32.653 | 343 | 215 | 8 | 29 | 358 | 39 | 378 | 1.96e-43 | 154 |
| MS.gene049293.t1 | AT1G63140 | 31.805 | 349 | 223 | 6 | 22 | 358 | 36 | 381 | 5.83e-43 | 153 |
| MS.gene049293.t1 | AT1G63140 | 31.805 | 349 | 223 | 6 | 22 | 358 | 56 | 401 | 1.31e-42 | 153 |
| MS.gene049293.t1 | AT1G21120 | 33.056 | 360 | 228 | 9 | 8 | 358 | 18 | 373 | 1.08e-41 | 150 |
| MS.gene049293.t1 | AT1G21110 | 34.018 | 341 | 212 | 9 | 8 | 339 | 18 | 354 | 1.25e-41 | 149 |
| MS.gene049293.t1 | AT1G21130 | 32.687 | 361 | 228 | 10 | 8 | 358 | 18 | 373 | 1.80e-41 | 149 |
| MS.gene049293.t1 | AT1G21120 | 33.333 | 360 | 227 | 9 | 8 | 358 | 66 | 421 | 4.54e-41 | 149 |
| MS.gene049293.t1 | AT5G37170 | 39.175 | 194 | 114 | 4 | 167 | 358 | 43 | 234 | 3.66e-40 | 142 |
| MS.gene049293.t1 | AT5G37170 | 39.894 | 188 | 109 | 4 | 173 | 358 | 1 | 186 | 6.32e-40 | 140 |
| MS.gene049293.t1 | AT1G62900 | 40.838 | 191 | 112 | 1 | 168 | 358 | 16 | 205 | 3.61e-39 | 138 |
| MS.gene049293.t1 | AT5G37170 | 39.175 | 194 | 114 | 4 | 167 | 358 | 143 | 334 | 5.15e-39 | 142 |
| MS.gene049293.t1 | AT1G76790 | 31.339 | 351 | 222 | 8 | 12 | 347 | 12 | 358 | 5.31e-39 | 142 |
| MS.gene049293.t1 | AT4G35160 | 29.589 | 365 | 232 | 10 | 1 | 348 | 15 | 371 | 1.85e-38 | 141 |
| MS.gene049293.t1 | AT1G33030 | 32.787 | 244 | 156 | 5 | 23 | 259 | 10 | 252 | 5.55e-33 | 124 |
| MS.gene049293.t1 | AT1G33030 | 32.271 | 251 | 162 | 5 | 23 | 266 | 10 | 259 | 6.03e-33 | 124 |
| MS.gene049293.t1 | AT4G35150 | 26.741 | 359 | 207 | 9 | 1 | 348 | 1 | 314 | 2.20e-32 | 124 |
| MS.gene049293.t1 | AT1G21130 | 33.333 | 261 | 161 | 8 | 8 | 259 | 18 | 274 | 2.12e-22 | 96.3 |
| MS.gene049293.t1 | AT1G63140 | 31.200 | 250 | 157 | 6 | 22 | 259 | 56 | 302 | 5.61e-21 | 92.4 |
| MS.gene049293.t1 | AT1G77530 | 32.751 | 229 | 139 | 7 | 22 | 238 | 36 | 261 | 1.27e-14 | 73.6 |
| MS.gene049293.t1 | AT1G63140 | 29.333 | 225 | 144 | 6 | 22 | 234 | 56 | 277 | 2.98e-12 | 67.0 |
Find 91 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCGAGGCTTGCCATTT+TGG | 0.196493 | 3.3:-79676254 | MS.gene049293:CDS |
| GTTGATGTTGGTGGAAATTC+TGG | 0.276999 | 3.3:-79675191 | MS.gene049293:CDS |
| TCCGCTGTTGGGACGAACTA+TGG | 0.311072 | 3.3:+79676114 | None:intergenic |
| AATTCTAGAACAGGAAAATA+AGG | 0.340914 | 3.3:+79672776 | None:intergenic |
| TGAAAGTACCTGAAGCTATA+TGG | 0.371128 | 3.3:-79676180 | MS.gene049293:CDS |
| CCACCTTGCCATATAGCTTC+AGG | 0.378883 | 3.3:+79676172 | None:intergenic |
| TTGATGCCTTTGAGTATGTT+TGG | 0.379016 | 3.3:+79675137 | None:intergenic |
| GCAAGCCTCGCTTCACTTTG+AGG | 0.394145 | 3.3:+79676262 | None:intergenic |
| CGCTTGAATCAGTTCCGGCT+GGG | 0.404048 | 3.3:-79674821 | MS.gene049293:CDS |
| GAACTGCTACAAGGCTCTTC+CGG | 0.408093 | 3.3:-79672996 | MS.gene049293:CDS |
| ATACGTGCTCCAGCACTATC+AGG | 0.414549 | 3.3:-79675939 | MS.gene049293:intron |
| TTCAGCGTCTCCTCCGCTGT+TGG | 0.417638 | 3.3:+79676102 | None:intergenic |
| CATTTCTGAAATTCTAGAAC+AGG | 0.425960 | 3.3:+79672767 | None:intergenic |
| ATTAAATTACCTGGCAATTG+AGG | 0.428675 | 3.3:+79675083 | None:intergenic |
| TCAGCGTCTCCTCCGCTGTT+GGG | 0.433493 | 3.3:+79676103 | None:intergenic |
| TAGCAAACAATAATGGAGAA+TGG | 0.439987 | 3.3:-79676304 | None:intergenic |
| GGTGCAGAAGATATCATATC+AGG | 0.442330 | 3.3:+79675104 | None:intergenic |
| TAAAACAAACTCATTTCATC+TGG | 0.446989 | 3.3:+79675296 | None:intergenic |
| AATGACAATGTATAGAACTA+AGG | 0.447407 | 3.3:-79672879 | MS.gene049293:CDS |
| AAGTTGTTTGAATTGTTCTT+CGG | 0.452222 | 3.3:+79672844 | None:intergenic |
| TTAATTAAACCTGATAGTGC+TGG | 0.454163 | 3.3:+79675930 | None:intergenic |
| AGCAAACAATAATGGAGAAT+GGG | 0.456384 | 3.3:-79676303 | None:intergenic |
| AAACAACTTGGCATTTCTAC+TGG | 0.457428 | 3.3:-79672830 | MS.gene049293:CDS |
| GCGCTTGAATCAGTTCCGGC+TGG | 0.463667 | 3.3:-79674822 | MS.gene049293:CDS |
| AATGTGTGCAAGTTCCAAAA+TGG | 0.463723 | 3.3:+79676240 | None:intergenic |
| ACGGCCATGCTCGCAGGTAC+TGG | 0.467387 | 3.3:+79675405 | None:intergenic |
| AGAATTTGAGAGGCAGAGAG+TGG | 0.478385 | 3.3:+79676139 | None:intergenic |
| CTCCAACATTTCATTCATGT+GGG | 0.482731 | 3.3:+79675247 | None:intergenic |
| GCCATTGCTGCTCAAGTCCT+CGG | 0.488671 | 3.3:+79676033 | None:intergenic |
| CTACCAACGGCCATGCTCGC+AGG | 0.494673 | 3.3:+79675399 | None:intergenic |
| TCTTGTTCTTTGACTCTCAT+CGG | 0.494808 | 3.3:+79672928 | None:intergenic |
| TAGGATAGACCATCATCATC+AGG | 0.497441 | 3.3:+79675968 | None:intergenic |
| GCCGAGGACTTGAGCAGCAA+TGG | 0.503156 | 3.3:-79676034 | MS.gene049293:CDS |
| TAGCATAAGTGGTGAGCAAA+CGG | 0.507794 | 3.3:+79676062 | None:intergenic |
| TGACTCTCATCGGTCAGCTC+CGG | 0.508920 | 3.3:+79672938 | None:intergenic |
| TGATGCGCTTGAATCAGTTC+CGG | 0.509380 | 3.3:-79674826 | MS.gene049293:CDS |
| TCTCCAACATTTCATTCATG+TGG | 0.521489 | 3.3:+79675246 | None:intergenic |
| TCTTCTGCACCTCAATTGCC+AGG | 0.528773 | 3.3:-79675092 | MS.gene049293:intron |
| AAGAACAAGAGCATTGTTGT+CGG | 0.531999 | 3.3:-79672915 | MS.gene049293:CDS |
| AGAACAAGAGCATTGTTGTC+GGG | 0.535407 | 3.3:-79672914 | MS.gene049293:CDS |
| TGTTTGTGAGCCGGTGTCAC+CGG | 0.537744 | 3.3:-79672957 | MS.gene049293:CDS |
| GAGAAGTATGATGGCTTCAA+AGG | 0.539698 | 3.3:-79675227 | MS.gene049293:CDS |
| ACTTGAGCAGCAATGGCAAA+AGG | 0.541451 | 3.3:-79676027 | MS.gene049293:CDS |
| TGGGGATGCTATCTTTACTA+AGG | 0.549158 | 3.3:-79674802 | MS.gene049293:intron |
| GCCCCACATGAATGAAATGT+TGG | 0.550679 | 3.3:-79675249 | MS.gene049293:CDS |
| ATGACAATGTATAGAACTAA+GGG | 0.551447 | 3.3:-79672878 | MS.gene049293:CDS |
| CTGCGAGCATGGCCGTTGGT+AGG | 0.552621 | 3.3:-79675398 | MS.gene049293:CDS |
| GCTCTTGTTCCTGATGATGA+TGG | 0.560343 | 3.3:-79675977 | MS.gene049293:CDS |
| GCTTGAATCAGTTCCGGCTG+GGG | 0.562608 | 3.3:-79674820 | MS.gene049293:CDS |
| CTGGAGCACGTATGTTGCAT+AGG | 0.569843 | 3.3:+79675949 | None:intergenic |
| AACAAGAGCTTTACCGATGT+CGG | 0.570815 | 3.3:+79675991 | None:intergenic |
| AGGACCAGTACCTGCGAGCA+TGG | 0.575828 | 3.3:-79675409 | MS.gene049293:CDS |
| TACAAGGCTCTTCCGGTGAA+CGG | 0.576438 | 3.3:-79672989 | MS.gene049293:CDS |
| AGCTTTACCGATGTCGGTGA+GGG | 0.576491 | 3.3:+79675997 | None:intergenic |
| AAGTACTCCCTCACCGACAT+CGG | 0.580829 | 3.3:-79676004 | MS.gene049293:CDS |
| AAAATTGATTGTTTGTGAGC+CGG | 0.585030 | 3.3:-79672966 | MS.gene049293:CDS |
| GTAAAGATAGCATCCCCAGC+CGG | 0.589819 | 3.3:+79674807 | None:intergenic |
| TCCAACATTTCATTCATGTG+GGG | 0.590027 | 3.3:+79675248 | None:intergenic |
| TGCAGTGGACAATGTTAACA+TGG | 0.590972 | 3.3:-79673048 | MS.gene049293:intron |
| GTGGAGACTCTAGTTGATGT+TGG | 0.592031 | 3.3:-79675203 | MS.gene049293:CDS |
| TCTCCGTGTAGCTTCTCGAA+CGG | 0.592087 | 3.3:+79675347 | None:intergenic |
| GAAATGTTGGAGAAGTATGA+TGG | 0.592269 | 3.3:-79675236 | MS.gene049293:CDS |
| GTACCTGAAGCTATATGGCA+AGG | 0.593518 | 3.3:-79676175 | MS.gene049293:CDS |
| AAAATAAGGATCAATGTGGA+AGG | 0.596257 | 3.3:+79672790 | None:intergenic |
| TTCGAGAAGCTACACGGAGA+AGG | 0.597251 | 3.3:-79675344 | MS.gene049293:CDS |
| AAATATCCAAACATACTCAA+AGG | 0.599530 | 3.3:-79675143 | MS.gene049293:CDS |
| TGCAGTGGAGGATGCATCTG+TGG | 0.599736 | 3.3:-79675372 | MS.gene049293:CDS |
| GCCGTTGGTAGGAGATGCAG+TGG | 0.601834 | 3.3:-79675387 | MS.gene049293:CDS |
| GAAGAACAATTCAAACAACT+TGG | 0.603168 | 3.3:-79672842 | MS.gene049293:CDS |
| TCGGTCAGCTCCGGTGACAC+CGG | 0.614991 | 3.3:+79672947 | None:intergenic |
| GGTCTTGCAGAACTGCTACA+AGG | 0.615939 | 3.3:-79673005 | MS.gene049293:CDS |
| GAGCTTTACCGATGTCGGTG+AGG | 0.617425 | 3.3:+79675996 | None:intergenic |
| GTATGATGGCTTCAAAGGTG+TGG | 0.619248 | 3.3:-79675222 | MS.gene049293:CDS |
| GGAGAATGGGAAAGTTCATG+TGG | 0.633634 | 3.3:-79676290 | MS.gene049293:CDS |
| TCCATAGTTCGTCCCAACAG+CGG | 0.635337 | 3.3:-79676115 | MS.gene049293:CDS |
| AACTATGGAGAGAATTTGAG+AGG | 0.637733 | 3.3:+79676129 | None:intergenic |
| GAGACTCTAGTTGATGTTGG+TGG | 0.642194 | 3.3:-79675200 | MS.gene049293:CDS |
| ATAGTTCGTCCCAACAGCGG+AGG | 0.654094 | 3.3:-79676112 | MS.gene049293:CDS |
| GTTGGTAGGAGATGCAGTGG+AGG | 0.654275 | 3.3:-79675384 | MS.gene049293:CDS |
| GGGCATTGACAATCCAGACA+TGG | 0.658458 | 3.3:+79675268 | None:intergenic |
| CAGGAAAATAAGGATCAATG+TGG | 0.660747 | 3.3:+79672786 | None:intergenic |
| GAACCGTTCGAGAAGCTACA+CGG | 0.665044 | 3.3:-79675350 | MS.gene049293:CDS |
| TCCACTGCATCTCCTACCAA+CGG | 0.666516 | 3.3:+79675386 | None:intergenic |
| GTACCTGCGAGCATGGCCGT+TGG | 0.674564 | 3.3:-79675402 | MS.gene049293:CDS |
| GACAGATGAAGAATGCAAGA+CGG | 0.681217 | 3.3:-79673026 | MS.gene049293:CDS |
| AGAACAGCAACAAGGGACGT+AGG | 0.690869 | 3.3:+79676208 | None:intergenic |
| CCTGAAGCTATATGGCAAGG+TGG | 0.693132 | 3.3:-79676172 | MS.gene049293:CDS |
| TAAAGCCTCAAAGTGAAGCG+AGG | 0.698513 | 3.3:-79676267 | MS.gene049293:CDS |
| CATAAGTGGTGAGCAAACGG+AGG | 0.707714 | 3.3:+79676065 | None:intergenic |
| TATATAGGTATAACACACGT+CGG | 0.727621 | 3.3:-79674852 | MS.gene049293:intron |
| ATAGGTATAACACACGTCGG+TGG | 0.737739 | 3.3:-79674849 | MS.gene049293:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATTAATTAATATAT+GGG | + | chr3.3:79673540-79673559 | None:intergenic | 0.0% |
| !! | TATTATAATTAATTAATATA+TGG | + | chr3.3:79673541-79673560 | None:intergenic | 0.0% |
| !! | TATCTTCAAAAAAAAAAATT+GGG | - | chr3.3:79674308-79674327 | MS.gene049293:intron | 10.0% |
| !! | TTATCTTCAAAAAAAAAAAT+TGG | - | chr3.3:79674307-79674326 | MS.gene049293:intron | 10.0% |
| !!! | ATTTAATTAAGTCTTTTTTT+TGG | - | chr3.3:79673991-79674010 | MS.gene049293:intron | 10.0% |
| !!! | TTTAATTAAGTCTTTTTTTT+GGG | - | chr3.3:79673992-79674011 | MS.gene049293:intron | 10.0% |
| !! | AAATTATTTGAGGATAATTT+AGG | + | chr3.3:79675577-79675596 | None:intergenic | 15.0% |
| !! | AGGGTTTAATTAATTTATAT+AGG | - | chr3.3:79673629-79673648 | MS.gene049293:intron | 15.0% |
| !!! | AATATACTACACATTTTTTA+AGG | - | chr3.3:79675204-79675223 | MS.gene049293:CDS | 15.0% |
| !!! | ATACATTAATTTTAGTAGTT+GGG | - | chr3.3:79673285-79673304 | MS.gene049293:intron | 15.0% |
| !!! | GATCTTTCTTTTTATTTATT+TGG | + | chr3.3:79675857-79675876 | None:intergenic | 15.0% |
| !!! | TAAAAATAATTGAGTTGATA+AGG | + | chr3.3:79675651-79675670 | None:intergenic | 15.0% |
| !!! | TATACATTAATTTTAGTAGT+TGG | - | chr3.3:79673284-79673303 | MS.gene049293:intron | 15.0% |
| !!! | TTTATTACCAAACTTTTATT+AGG | - | chr3.3:79674471-79674490 | MS.gene049293:intron | 15.0% |
| !!! | TTTTTCAAATTAGACTAATT+AGG | + | chr3.3:79674035-79674054 | None:intergenic | 15.0% |
| !! | AAAAAGAGTTAAAAAAGAGT+AGG | + | chr3.3:79674453-79674472 | None:intergenic | 20.0% |
| !! | AAAGACTTAATTAAATTACC+TGG | + | chr3.3:79673987-79674006 | None:intergenic | 20.0% |
| !! | AACAAAGAAATTGAGAATAA+TGG | - | chr3.3:79673246-79673265 | MS.gene049293:intron | 20.0% |
| !! | ACAAAGAAATTGAGAATAAT+GGG | - | chr3.3:79673247-79673266 | MS.gene049293:intron | 20.0% |
| !! | CTTAAGAGTAAAATTATTTG+AGG | + | chr3.3:79675587-79675606 | None:intergenic | 20.0% |
| !! | TAAATATCTAAGGGTAATAT+TGG | - | chr3.3:79675075-79675094 | MS.gene049293:intron | 20.0% |
| !! | TTACCCTTAGATATTTATTA+CGG | + | chr3.3:79675072-79675091 | None:intergenic | 20.0% |
| !!! | AGGAAAATCATATTTTACTA+CGG | + | chr3.3:79674363-79674382 | None:intergenic | 20.0% |
| !!! | GTTAATTATTTATTTTGCAG+TGG | - | chr3.3:79675995-79676014 | MS.gene049293:CDS | 20.0% |
| !!! | TAAAATTTAAAATTAGTCCG+TGG | + | chr3.3:79674120-79674139 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATAAGCAACTAG+CGG | + | chr3.3:79675824-79675843 | None:intergenic | 20.0% |
| ! | AAATATCCAAACATACTCAA+AGG | - | chr3.3:79673915-79673934 | MS.gene049293:intron | 25.0% |
| ! | AAGTGACAATTAAAAAGGAA+CGG | + | chr3.3:79674931-79674950 | None:intergenic | 25.0% |
| ! | AAGTTGTTTGAATTGTTCTT+CGG | + | chr3.3:79676217-79676236 | None:intergenic | 25.0% |
| ! | AATGACAATGTATAGAACTA+AGG | - | chr3.3:79676179-79676198 | MS.gene049293:CDS | 25.0% |
| ! | ATGACAATGTATAGAACTAA+GGG | - | chr3.3:79676180-79676199 | MS.gene049293:CDS | 25.0% |
| ! | CAAAACAAAAAATTCATACG+TGG | - | chr3.3:79673606-79673625 | MS.gene049293:intron | 25.0% |
| ! | CAAAGAAATTGAGAATAATG+GGG | - | chr3.3:79673248-79673267 | MS.gene049293:intron | 25.0% |
| ! | CTTATTGTAACATAACTTTG+AGG | - | chr3.3:79673333-79673352 | MS.gene049293:intron | 25.0% |
| ! | CTTTAATGCTCAAGAAAAAT+TGG | + | chr3.3:79675743-79675762 | None:intergenic | 25.0% |
| ! | GTTCAACACTATTCTAATTT+AGG | + | chr3.3:79674566-79674585 | None:intergenic | 25.0% |
| ! | TAAAACAAACTCATTTCATC+TGG | + | chr3.3:79673765-79673784 | None:intergenic | 25.0% |
| ! | TAAATCTACACCATAATTCA+AGG | - | chr3.3:79675676-79675695 | MS.gene049293:intron | 25.0% |
| ! | TACAAAATCAACTTGTAAGT+TGG | + | chr3.3:79673481-79673500 | None:intergenic | 25.0% |
| ! | TCTCCGTAATAAATATCTAA+GGG | - | chr3.3:79675066-79675085 | MS.gene049293:intron | 25.0% |
| ! | TGAATATGTTTCCATGAATA+TGG | - | chr3.3:79673359-79673378 | MS.gene049293:intron | 25.0% |
| ! | TTTATTTAACTCTTGTCTTG+TGG | - | chr3.3:79674179-79674198 | MS.gene049293:intron | 25.0% |
| ! | TTTGAAAGTGACAGTTAAAT+AGG | - | chr3.3:79675126-79675145 | MS.gene049293:CDS | 25.0% |
| !!! | AATATGTTGTTTTGGATCAT+GGG | + | chr3.3:79674757-79674776 | None:intergenic | 25.0% |
| !!! | AATTCTAGAACAGGAAAATA+AGG | + | chr3.3:79676285-79676304 | None:intergenic | 25.0% |
| !!! | ATATGTATTTGTTGTTGAGA+AGG | + | chr3.3:79674387-79674406 | None:intergenic | 25.0% |
| !!! | CGTATGAATTTTTTGTTTTG+AGG | + | chr3.3:79673606-79673625 | None:intergenic | 25.0% |
| !!! | TATGTATTTGTTGTTGAGAA+GGG | + | chr3.3:79674386-79674405 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTTCCTTGAATTA+TGG | + | chr3.3:79675689-79675708 | None:intergenic | 25.0% |
| AAAATAAGGATCAATGTGGA+AGG | + | chr3.3:79676271-79676290 | None:intergenic | 30.0% | |
| AAAATTGATTGTTTGTGAGC+CGG | - | chr3.3:79676092-79676111 | MS.gene049293:CDS | 30.0% | |
| AACAAAAAATTCATACGTGG+AGG | - | chr3.3:79673609-79673628 | MS.gene049293:intron | 30.0% | |
| AATATGGTACTATCACTCAA+CGG | - | chr3.3:79673375-79673394 | MS.gene049293:intron | 30.0% | |
| ACAAAAAATTCATACGTGGA+GGG | - | chr3.3:79673610-79673629 | MS.gene049293:intron | 30.0% | |
| AGACTAATTAGGTTCCAAAA+TGG | + | chr3.3:79674024-79674043 | None:intergenic | 30.0% | |
| AGAGTTAAAAAAGAGTAGGT+AGG | + | chr3.3:79674449-79674468 | None:intergenic | 30.0% | |
| ATTAAATTACCTGGCAATTG+AGG | + | chr3.3:79673978-79673997 | None:intergenic | 30.0% | |
| CCAGAAAGTGACAATTAAAA+AGG | + | chr3.3:79674936-79674955 | None:intergenic | 30.0% | |
| CTCTCCGTAATAAATATCTA+AGG | - | chr3.3:79675065-79675084 | MS.gene049293:intron | 30.0% | |
| GAAGAACAATTCAAACAACT+TGG | - | chr3.3:79676216-79676235 | MS.gene049293:CDS | 30.0% | |
| GAGTTAAAAAAGAGTAGGTA+GGG | + | chr3.3:79674448-79674467 | None:intergenic | 30.0% | |
| GCAAGAGAACTATAATTATG+TGG | + | chr3.3:79675610-79675629 | None:intergenic | 30.0% | |
| GTTTACTGTTGTTATCGTTT+GGG | + | chr3.3:79674785-79674804 | None:intergenic | 30.0% | |
| TATATAGGTATAACACACGT+CGG | - | chr3.3:79674206-79674225 | MS.gene049293:intron | 30.0% | |
| TCTAAATGCGACAGTTAAAA+AGG | - | chr3.3:79675162-79675181 | MS.gene049293:CDS | 30.0% | |
| TGTTTACTGTTGTTATCGTT+TGG | + | chr3.3:79674786-79674805 | None:intergenic | 30.0% | |
| TTGACAAATATTAGTGTACC+AGG | - | chr3.3:79674066-79674085 | MS.gene049293:intron | 30.0% | |
| ! | ATCAGCAGTATAGAAGTATA+TGG | + | chr3.3:79675509-79675528 | None:intergenic | 30.0% |
| ! | TTAATTAAACCTGATAGTGC+TGG | + | chr3.3:79673131-79673150 | None:intergenic | 30.0% |
| !! | CATTTCTGAAATTCTAGAAC+AGG | + | chr3.3:79676294-79676313 | None:intergenic | 30.0% |
| !!! | CACATTTTTTAAGGTTGACT+TGG | - | chr3.3:79675213-79675232 | MS.gene049293:CDS | 30.0% |
| !!! | CCTTTTTAATTGTCACTTTC+TGG | - | chr3.3:79674933-79674952 | MS.gene049293:intron | 30.0% |
| !!! | GAATATGTTGTTTTGGATCA+TGG | + | chr3.3:79674758-79674777 | None:intergenic | 30.0% |
| AAACAACTTGGCATTTCTAC+TGG | - | chr3.3:79676228-79676247 | MS.gene049293:CDS | 35.0% | |
| AACTATGGAGAGAATTTGAG+AGG | + | chr3.3:79672932-79672951 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr3.3:79675390-79675409 | MS.gene049293:CDS | 35.0% | |
| AATGTGTGCAAGTTCCAAAA+TGG | + | chr3.3:79672821-79672840 | None:intergenic | 35.0% | |
| ACAAATATTAGTGTACCAGG+AGG | - | chr3.3:79674069-79674088 | MS.gene049293:intron | 35.0% | |
| ATGCGACAGTTAAAAAGGAA+CGG | - | chr3.3:79675167-79675186 | MS.gene049293:CDS | 35.0% | |
| ATTGATGAGAAAGACTTGTG+TGG | + | chr3.3:79675486-79675505 | None:intergenic | 35.0% | |
| CAGGAAAATAAGGATCAATG+TGG | + | chr3.3:79676275-79676294 | None:intergenic | 35.0% | |
| CTCCAACATTTCATTCATGT+GGG | + | chr3.3:79673814-79673833 | None:intergenic | 35.0% | |
| GAAAATACTTGTGTAGACCA+GGG | - | chr3.3:79675316-79675335 | MS.gene049293:CDS | 35.0% | |
| GAGTGATAGTACCATATTCA+TGG | + | chr3.3:79673373-79673392 | None:intergenic | 35.0% | |
| TCCAACATTTCATTCATGTG+GGG | + | chr3.3:79673813-79673832 | None:intergenic | 35.0% | |
| TCGTTTCTTTGATTCACATC+CGG | + | chr3.3:79674879-79674898 | None:intergenic | 35.0% | |
| TCTCCAACATTTCATTCATG+TGG | + | chr3.3:79673815-79673834 | None:intergenic | 35.0% | |
| TCTGCGTCCTAATAAAAGTT+TGG | + | chr3.3:79674481-79674500 | None:intergenic | 35.0% | |
| TCTTGTTCTTTGACTCTCAT+CGG | + | chr3.3:79676133-79676152 | None:intergenic | 35.0% | |
| TGACAATTAAAAAGGAACGG+AGG | + | chr3.3:79674928-79674947 | None:intergenic | 35.0% | |
| TTCACTATCGTCAGATCTTT+AGG | + | chr3.3:79674668-79674687 | None:intergenic | 35.0% | |
| TTGATGCCTTTGAGTATGTT+TGG | + | chr3.3:79673924-79673943 | None:intergenic | 35.0% | |
| TTGTCTTGTGGCATGTATAT+AGG | - | chr3.3:79674191-79674210 | MS.gene049293:intron | 35.0% | |
| ! | ACAATCAATTTTCCGTTCAC+CGG | + | chr3.3:79676084-79676103 | None:intergenic | 35.0% |
| ! | GAAATGTTGGAGAAGTATGA+TGG | - | chr3.3:79673822-79673841 | MS.gene049293:intron | 35.0% |
| ! | GATATTGATAGCTCCAATGT+GGG | + | chr3.3:79674849-79674868 | None:intergenic | 35.0% |
| !! | AAGAACAAGAGCATTGTTGT+CGG | - | chr3.3:79676143-79676162 | MS.gene049293:CDS | 35.0% |
| !! | CAACTTTGCAAGCTTGTTTT+GGG | + | chr3.3:79674712-79674731 | None:intergenic | 35.0% |
| !! | CATTTTGAGAACAGCAACAA+GGG | + | chr3.3:79672860-79672879 | None:intergenic | 35.0% |
| !! | TCATTTTGAGAACAGCAACA+AGG | + | chr3.3:79672861-79672880 | None:intergenic | 35.0% |
| !! | TGAAAGTACCTGAAGCTATA+TGG | - | chr3.3:79672878-79672897 | MS.gene049293:CDS | 35.0% |
| !!! | TTTTTGGGTCACTACCATTT+TGG | - | chr3.3:79674007-79674026 | MS.gene049293:intron | 35.0% |
| AAATTAGTCCGTGGACAAAC+TGG | + | chr3.3:79674111-79674130 | None:intergenic | 40.0% | |
| AACAAGAGCTTTACCGATGT+CGG | + | chr3.3:79673070-79673089 | None:intergenic | 40.0% | |
| ACGATTTAACACCAACATGG+TGG | - | chr3.3:79674614-79674633 | MS.gene049293:intron | 40.0% | |
| ATAAGCAACTAGCGGAAAGA+CGG | + | chr3.3:79675816-79675835 | None:intergenic | 40.0% | |
| CATGTCATGCATATCAATCC+AGG | - | chr3.3:79675294-79675313 | MS.gene049293:CDS | 40.0% | |
| CGATTTAACACCAACATGGT+GGG | - | chr3.3:79674615-79674634 | MS.gene049293:intron | 40.0% | |
| CTCGGCAAAAATAGCATAAG+TGG | + | chr3.3:79673010-79673029 | None:intergenic | 40.0% | |
| GAATCTATTGCGTGTTTGAG+TGG | + | chr3.3:79674810-79674829 | None:intergenic | 40.0% | |
| GACAGATGAAGAATGCAAGA+CGG | - | chr3.3:79676032-79676051 | MS.gene049293:CDS | 40.0% | |
| GACAGTTAAAAAGGAACGGA+GGG | - | chr3.3:79675171-79675190 | MS.gene049293:CDS | 40.0% | |
| GCTATCAATATCGAACCAAC+CGG | - | chr3.3:79674857-79674876 | MS.gene049293:intron | 40.0% | |
| GGAAAATACTTGTGTAGACC+AGG | - | chr3.3:79675315-79675334 | MS.gene049293:CDS | 40.0% | |
| GGTCTCGTTTCTTCCTTTAT+GGG | + | chr3.3:79674691-79674710 | None:intergenic | 40.0% | |
| GGTGCAGAAGATATCATATC+AGG | + | chr3.3:79673957-79673976 | None:intergenic | 40.0% | |
| GTCAGATCTTTAGGTGCAAT+GGG | + | chr3.3:79674659-79674678 | None:intergenic | 40.0% | |
| TAGCATAAGTGGTGAGCAAA+CGG | + | chr3.3:79672999-79673018 | None:intergenic | 40.0% | |
| TAGGATAGACCATCATCATC+AGG | + | chr3.3:79673093-79673112 | None:intergenic | 40.0% | |
| TCGGTCACAACCAAAGAAAT+GGG | - | chr3.3:79675354-79675373 | MS.gene049293:CDS | 40.0% | |
| TCTCTTCTCTCCCATTTCTT+TGG | + | chr3.3:79675367-79675386 | None:intergenic | 40.0% | |
| TGACGATAGTGAACCCATAA+AGG | - | chr3.3:79674675-79674694 | MS.gene049293:intron | 40.0% | |
| TGCACGATTTAACACCAACA+TGG | - | chr3.3:79674611-79674630 | MS.gene049293:intron | 40.0% | |
| TGCAGTGGACAATGTTAACA+TGG | - | chr3.3:79676010-79676029 | MS.gene049293:CDS | 40.0% | |
| TGGGGATGCTATCTTTACTA+AGG | - | chr3.3:79674256-79674275 | MS.gene049293:intron | 40.0% | |
| TTAGTGTCATGAACCCACAT+TGG | - | chr3.3:79674833-79674852 | MS.gene049293:CDS | 40.0% | |
| TTCTTTGATTCACATCCGGT+TGG | + | chr3.3:79674875-79674894 | None:intergenic | 40.0% | |
| TTGGTTGTGACCGAGAAATT+GGG | + | chr3.3:79675348-79675367 | None:intergenic | 40.0% | |
| TTTGGTTGTGACCGAGAAAT+TGG | + | chr3.3:79675349-79675368 | None:intergenic | 40.0% | |
| ! | AATGGGTTCTTCCTTTATGG+TGG | + | chr3.3:79674642-79674661 | None:intergenic | 40.0% |
| ! | CGATATTGATAGCTCCAATG+TGG | + | chr3.3:79674850-79674869 | None:intergenic | 40.0% |
| ! | GAGAAGTATGATGGCTTCAA+AGG | - | chr3.3:79673831-79673850 | MS.gene049293:intron | 40.0% |
| ! | GGTCTACACAAGTATTTTCC+TGG | + | chr3.3:79675315-79675334 | None:intergenic | 40.0% |
| ! | GTTGATGTTGGTGGAAATTC+TGG | - | chr3.3:79673867-79673886 | MS.gene049293:intron | 40.0% |
| ! | TGCAATGGGTTCTTCCTTTA+TGG | + | chr3.3:79674645-79674664 | None:intergenic | 40.0% |
| !! | AGAACAAGAGCATTGTTGTC+GGG | - | chr3.3:79676144-79676163 | MS.gene049293:CDS | 40.0% |
| !! | GCAACTTTGCAAGCTTGTTT+TGG | + | chr3.3:79674713-79674732 | None:intergenic | 40.0% |
| !! | GGGTTGCGAATATGTTGTTT+TGG | + | chr3.3:79674765-79674784 | None:intergenic | 40.0% |
| !! | GTATTTGTTGTTGAGAAGGG+AGG | + | chr3.3:79674383-79674402 | None:intergenic | 40.0% |
| !! | TTGTTTTACGCTTCCATGTC+TGG | - | chr3.3:79673777-79673796 | MS.gene049293:intron | 40.0% |
| !!! | CACTTATGCTATTTTTGCCG+AGG | - | chr3.3:79673008-79673027 | MS.gene049293:CDS | 40.0% |
| ACTTGAGCAGCAATGGCAAA+AGG | - | chr3.3:79673031-79673050 | MS.gene049293:CDS | 45.0% | |
| AGAATTTGAGAGGCAGAGAG+TGG | + | chr3.3:79672922-79672941 | None:intergenic | 45.0% | |
| AGGGACCAAACCCAATTTCT+CGG | - | chr3.3:79675335-79675354 | MS.gene049293:CDS | 45.0% | |
| ATAGGTATAACACACGTCGG+TGG | - | chr3.3:79674209-79674228 | MS.gene049293:intron | 45.0% | |
| CCACTAATAATACAGCCTCC+TGG | + | chr3.3:79674087-79674106 | None:intergenic | 45.0% | |
| CCAGGAGGCTGTATTATTAG+TGG | - | chr3.3:79674084-79674103 | MS.gene049293:intron | 45.0% | |
| CGACAGTTAAAAAGGAACGG+AGG | - | chr3.3:79675170-79675189 | MS.gene049293:CDS | 45.0% | |
| CGTCAGATCTTTAGGTGCAA+TGG | + | chr3.3:79674660-79674679 | None:intergenic | 45.0% | |
| CTCGGTCACAACCAAAGAAA+TGG | - | chr3.3:79675353-79675372 | MS.gene049293:CDS | 45.0% | |
| CTTGCAAAGTTGCTGAGTCA+TGG | - | chr3.3:79674720-79674739 | MS.gene049293:intron | 45.0% | |
| GCCCCACATGAATGAAATGT+TGG | - | chr3.3:79673809-79673828 | MS.gene049293:intron | 45.0% | |
| GGAACGGAGGTAGTAACAAT+TGG | + | chr3.3:79674915-79674934 | None:intergenic | 45.0% | |
| GGAGAATGGGAAAGTTCATG+TGG | - | chr3.3:79672768-79672787 | MS.gene049293:CDS | 45.0% | |
| GGGTCTCGTTTCTTCCTTTA+TGG | + | chr3.3:79674692-79674711 | None:intergenic | 45.0% | |
| GTACCTGAAGCTATATGGCA+AGG | - | chr3.3:79672883-79672902 | MS.gene049293:CDS | 45.0% | |
| GTATGATGGCTTCAAAGGTG+TGG | - | chr3.3:79673836-79673855 | MS.gene049293:intron | 45.0% | |
| TAAAGCCTCAAAGTGAAGCG+AGG | - | chr3.3:79672791-79672810 | MS.gene049293:CDS | 45.0% | |
| TGATGCGCTTGAATCAGTTC+CGG | - | chr3.3:79674232-79674251 | MS.gene049293:intron | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | - | chr3.3:79675453-79675472 | MS.gene049293:intron | 45.0% | |
| TGTGACCGAGAAATTGGGTT+TGG | + | chr3.3:79675343-79675362 | None:intergenic | 45.0% | |
| ! | GAGACTCTAGTTGATGTTGG+TGG | - | chr3.3:79673858-79673877 | MS.gene049293:intron | 45.0% |
| ! | GCTCTTGTTCCTGATGATGA+TGG | - | chr3.3:79673081-79673100 | MS.gene049293:intron | 45.0% |
| ! | GTGGAGACTCTAGTTGATGT+TGG | - | chr3.3:79673855-79673874 | MS.gene049293:intron | 45.0% |
| ! | TTAGTGGACCAGTTTGTCCA+CGG | - | chr3.3:79674100-79674119 | MS.gene049293:intron | 45.0% |
| !! | AATGAAATATTAAATTAATA+AGG | + | chr3.3:79675033-79675052 | None:intergenic | 5.0% |
| AAGTACTCCCTCACCGACAT+CGG | - | chr3.3:79673054-79673073 | MS.gene049293:intron | 50.0% | |
| AGAACAGCAACAAGGGACGT+AGG | + | chr3.3:79672853-79672872 | None:intergenic | 50.0% | |
| AGCTTTACCGATGTCGGTGA+GGG | + | chr3.3:79673064-79673083 | None:intergenic | 50.0% | |
| ATACGTGCTCCAGCACTATC+AGG | - | chr3.3:79673119-79673138 | MS.gene049293:intron | 50.0% | |
| CAAACCCAATTGTGTGGTCC+TGG | - | chr3.3:79675459-79675478 | MS.gene049293:intron | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | + | chr3.3:79675461-79675480 | None:intergenic | 50.0% | |
| CATAAGTGGTGAGCAAACGG+AGG | + | chr3.3:79672996-79673015 | None:intergenic | 50.0% | |
| CCACCTTGCCATATAGCTTC+AGG | + | chr3.3:79672889-79672908 | None:intergenic | 50.0% | |
| CCTGAAGCTATATGGCAAGG+TGG | - | chr3.3:79672886-79672905 | MS.gene049293:CDS | 50.0% | |
| CTGGAGCACGTATGTTGCAT+AGG | + | chr3.3:79673112-79673131 | None:intergenic | 50.0% | |
| GAACCGTTCGAGAAGCTACA+CGG | - | chr3.3:79673708-79673727 | MS.gene049293:intron | 50.0% | |
| GAACTGCTACAAGGCTCTTC+CGG | - | chr3.3:79676062-79676081 | MS.gene049293:CDS | 50.0% | |
| GAGAAAGACTTGTGTGGACC+AGG | + | chr3.3:79675480-79675499 | None:intergenic | 50.0% | |
| GGTCTTGCAGAACTGCTACA+AGG | - | chr3.3:79676053-79676072 | MS.gene049293:CDS | 50.0% | |
| GTAAAGATAGCATCCCCAGC+CGG | + | chr3.3:79674254-79674273 | None:intergenic | 50.0% | |
| GTGCAGCTTCACGATTCAGT+TGG | + | chr3.3:79674596-79674615 | None:intergenic | 50.0% | |
| TACAAGGCTCTTCCGGTGAA+CGG | - | chr3.3:79676069-79676088 | MS.gene049293:CDS | 50.0% | |
| TCCACTGCATCTCCTACCAA+CGG | + | chr3.3:79673675-79673694 | None:intergenic | 50.0% | |
| TCCATAGTTCGTCCCAACAG+CGG | - | chr3.3:79672943-79672962 | MS.gene049293:CDS | 50.0% | |
| TCTCCGTGTAGCTTCTCGAA+CGG | + | chr3.3:79673714-79673733 | None:intergenic | 50.0% | |
| TCTTCTGCACCTCAATTGCC+AGG | - | chr3.3:79673966-79673985 | MS.gene049293:intron | 50.0% | |
| TGGACCAGGACCACACAATT+GGG | + | chr3.3:79675466-79675485 | None:intergenic | 50.0% | |
| TTATGGTGGTCCCACCATGT+TGG | + | chr3.3:79674628-79674647 | None:intergenic | 50.0% | |
| TTCGAGAAGCTACACGGAGA+AGG | - | chr3.3:79673714-79673733 | MS.gene049293:intron | 50.0% | |
| ! | ACATGGTGGGACCACCATAA+AGG | - | chr3.3:79674628-79674647 | MS.gene049293:intron | 50.0% |
| ! | GAGAAATTGGGTTTGGTCCC+TGG | + | chr3.3:79675336-79675355 | None:intergenic | 50.0% |
| !! | GGGCATTGACAATCCAGACA+TGG | + | chr3.3:79673793-79673812 | None:intergenic | 50.0% |
| !! | TGAAGCGAGGCTTGCCATTT+TGG | - | chr3.3:79672804-79672823 | MS.gene049293:CDS | 50.0% |
| ATAGTTCGTCCCAACAGCGG+AGG | - | chr3.3:79672946-79672965 | MS.gene049293:CDS | 55.0% | |
| CGCTTGAATCAGTTCCGGCT+GGG | - | chr3.3:79674237-79674256 | MS.gene049293:intron | 55.0% | |
| GAGCTTTACCGATGTCGGTG+AGG | + | chr3.3:79673065-79673084 | None:intergenic | 55.0% | |
| GCAAGCCTCGCTTCACTTTG+AGG | + | chr3.3:79672799-79672818 | None:intergenic | 55.0% | |
| GCCATTGCTGCTCAAGTCCT+CGG | + | chr3.3:79673028-79673047 | None:intergenic | 55.0% | |
| GCTTGAATCAGTTCCGGCTG+GGG | - | chr3.3:79674238-79674257 | MS.gene049293:intron | 55.0% | |
| GTGGACCAGGACCACACAAT+TGG | + | chr3.3:79675467-79675486 | None:intergenic | 55.0% | |
| TCCGCTGTTGGGACGAACTA+TGG | + | chr3.3:79672947-79672966 | None:intergenic | 55.0% | |
| TGACTCTCATCGGTCAGCTC+CGG | + | chr3.3:79676123-79676142 | None:intergenic | 55.0% | |
| TGCAGTGGAGGATGCATCTG+TGG | - | chr3.3:79673686-79673705 | MS.gene049293:intron | 55.0% | |
| ! | GTTGGTAGGAGATGCAGTGG+AGG | - | chr3.3:79673674-79673693 | MS.gene049293:intron | 55.0% |
| !! | TGTTTGTGAGCCGGTGTCAC+CGG | - | chr3.3:79676101-79676120 | MS.gene049293:CDS | 55.0% |
| AGGACCAGTACCTGCGAGCA+TGG | - | chr3.3:79673649-79673668 | MS.gene049293:intron | 60.0% | |
| GCCGAGGACTTGAGCAGCAA+TGG | - | chr3.3:79673024-79673043 | MS.gene049293:CDS | 60.0% | |
| GCGCTTGAATCAGTTCCGGC+TGG | - | chr3.3:79674236-79674255 | MS.gene049293:intron | 60.0% | |
| TCAGCGTCTCCTCCGCTGTT+GGG | + | chr3.3:79672958-79672977 | None:intergenic | 60.0% | |
| TTCAGCGTCTCCTCCGCTGT+TGG | + | chr3.3:79672959-79672978 | None:intergenic | 60.0% | |
| ! | GCCGTTGGTAGGAGATGCAG+TGG | - | chr3.3:79673671-79673690 | MS.gene049293:intron | 60.0% |
| ACGGCCATGCTCGCAGGTAC+TGG | + | chr3.3:79673656-79673675 | None:intergenic | 65.0% | |
| CTACCAACGGCCATGCTCGC+AGG | + | chr3.3:79673662-79673681 | None:intergenic | 65.0% | |
| CTGCGAGCATGGCCGTTGGT+AGG | - | chr3.3:79673660-79673679 | MS.gene049293:intron | 65.0% | |
| GTACCTGCGAGCATGGCCGT+TGG | - | chr3.3:79673656-79673675 | MS.gene049293:intron | 65.0% | |
| TCGGTCAGCTCCGGTGACAC+CGG | + | chr3.3:79676114-79676133 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79672766 | 79676314 | 79672766 | ID=MS.gene049293 |
| chr3.3 | mRNA | 79672766 | 79676314 | 79672766 | ID=MS.gene049293.t1;Parent=MS.gene049293 |
| chr3.3 | exon | 79675940 | 79676314 | 79675940 | ID=MS.gene049293.t1.exon1;Parent=MS.gene049293.t1 |
| chr3.3 | CDS | 79675940 | 79676314 | 79675940 | ID=cds.MS.gene049293.t1;Parent=MS.gene049293.t1 |
| chr3.3 | exon | 79675093 | 79675429 | 79675093 | ID=MS.gene049293.t1.exon2;Parent=MS.gene049293.t1 |
| chr3.3 | CDS | 79675093 | 79675429 | 79675093 | ID=cds.MS.gene049293.t1;Parent=MS.gene049293.t1 |
| chr3.3 | exon | 79674803 | 79674867 | 79674803 | ID=MS.gene049293.t1.exon3;Parent=MS.gene049293.t1 |
| chr3.3 | CDS | 79674803 | 79674867 | 79674803 | ID=cds.MS.gene049293.t1;Parent=MS.gene049293.t1 |
| chr3.3 | exon | 79672766 | 79673065 | 79672766 | ID=MS.gene049293.t1.exon4;Parent=MS.gene049293.t1 |
| chr3.3 | CDS | 79672766 | 79673065 | 79672766 | ID=cds.MS.gene049293.t1;Parent=MS.gene049293.t1 |
| Gene Sequence |
| Protein sequence |
