Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61638.t1 | XP_024638331.1 | 96.4 | 440 | 16 | 0 | 1 | 440 | 1 | 440 | 9.50E-193 | 682.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61638.t1 | Q9SF32 | 37.3 | 177 | 110 | 1 | 94 | 269 | 105 | 281 | 2.6e-21 | 104.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61638.t1 | G7JES7 | 96.1 | 440 | 16 | 1 | 1 | 440 | 1 | 439 | 3.8e-191 | 677.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050237 | MS.gene61638 | 0.803003 | 4.29E-49 | -1.69E-46 |
MS.gene050807 | MS.gene61638 | 0.810244 | 1.27E-50 | -1.69E-46 |
MS.gene050808 | MS.gene61638 | 0.816449 | 5.50E-52 | -1.69E-46 |
MS.gene052020 | MS.gene61638 | 0.801516 | 8.68E-49 | -1.69E-46 |
MS.gene052516 | MS.gene61638 | 0.801688 | 8.00E-49 | -1.69E-46 |
MS.gene052665 | MS.gene61638 | 0.811461 | 6.92E-51 | -1.69E-46 |
MS.gene053599 | MS.gene61638 | 0.800388 | 1.48E-48 | -1.69E-46 |
MS.gene055465 | MS.gene61638 | 0.810008 | 1.43E-50 | -1.69E-46 |
MS.gene057915 | MS.gene61638 | 0.802027 | 6.82E-49 | -1.69E-46 |
MS.gene060587 | MS.gene61638 | 0.803261 | 3.79E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61638.t1 | MTR_4g050480 | 96.818 | 440 | 13 | 1 | 1 | 440 | 1 | 439 | 0.0 | 873 |
MS.gene61638.t1 | MTR_4g050480 | 96.591 | 440 | 13 | 2 | 1 | 440 | 1 | 438 | 0.0 | 867 |
MS.gene61638.t1 | MTR_3g104570 | 45.985 | 274 | 134 | 4 | 1 | 266 | 1 | 268 | 1.60e-56 | 193 |
MS.gene61638.t1 | MTR_1g095740 | 51.366 | 183 | 79 | 4 | 94 | 271 | 138 | 315 | 5.97e-51 | 179 |
MS.gene61638.t1 | MTR_6g033415 | 45.565 | 248 | 123 | 5 | 89 | 328 | 99 | 342 | 3.90e-48 | 170 |
MS.gene61638.t1 | MTR_7g100790 | 52.632 | 171 | 80 | 1 | 96 | 265 | 107 | 277 | 3.18e-45 | 163 |
MS.gene61638.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 76 | 240 | 7.24e-45 | 159 |
MS.gene61638.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 16 | 180 | 8.69e-45 | 157 |
MS.gene61638.t1 | MTR_2g015370 | 35.145 | 276 | 131 | 7 | 1 | 270 | 1 | 234 | 4.10e-44 | 156 |
MS.gene61638.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 115 | 275 | 4.78e-44 | 160 |
MS.gene61638.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 120 | 280 | 6.53e-44 | 160 |
MS.gene61638.t1 | MTR_8g024540 | 46.535 | 202 | 87 | 7 | 96 | 280 | 126 | 323 | 7.97e-42 | 155 |
MS.gene61638.t1 | MTR_8g017570 | 38.129 | 278 | 143 | 6 | 1 | 265 | 1 | 262 | 4.38e-37 | 140 |
MS.gene61638.t1 | MTR_4g087420 | 33.140 | 344 | 169 | 15 | 99 | 393 | 148 | 479 | 5.64e-33 | 130 |
MS.gene61638.t1 | MTR_2g099780 | 53.107 | 177 | 73 | 3 | 96 | 262 | 77 | 253 | 6.79e-33 | 129 |
MS.gene61638.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 96 | 292 | 9.36e-33 | 129 |
MS.gene61638.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 121 | 317 | 1.92e-32 | 129 |
MS.gene61638.t1 | MTR_0047s0040 | 33.495 | 206 | 118 | 5 | 96 | 295 | 100 | 292 | 2.83e-26 | 110 |
MS.gene61638.t1 | MTR_3g020990 | 48.062 | 129 | 54 | 3 | 98 | 225 | 96 | 212 | 1.27e-25 | 105 |
MS.gene61638.t1 | MTR_3g091560 | 44.886 | 176 | 78 | 5 | 97 | 259 | 112 | 281 | 5.90e-25 | 107 |
MS.gene61638.t1 | MTR_7g114700 | 36.047 | 172 | 95 | 5 | 88 | 255 | 126 | 286 | 3.40e-24 | 104 |
MS.gene61638.t1 | MTR_1g103070 | 47.788 | 113 | 46 | 2 | 96 | 195 | 135 | 247 | 4.59e-23 | 101 |
MS.gene61638.t1 | MTR_0019s0070 | 39.053 | 169 | 75 | 3 | 92 | 260 | 112 | 252 | 1.89e-22 | 99.8 |
MS.gene61638.t1 | MTR_1g101330 | 40.000 | 160 | 69 | 3 | 96 | 255 | 114 | 246 | 2.37e-22 | 99.4 |
MS.gene61638.t1 | MTR_2g100740 | 34.135 | 208 | 96 | 5 | 1 | 185 | 1 | 190 | 3.22e-22 | 97.8 |
MS.gene61638.t1 | MTR_8g014580 | 63.014 | 73 | 27 | 0 | 96 | 168 | 125 | 197 | 3.49e-22 | 98.6 |
MS.gene61638.t1 | MTR_4g108140 | 31.408 | 277 | 134 | 10 | 4 | 261 | 5 | 244 | 4.08e-22 | 99.4 |
MS.gene61638.t1 | MTR_4g108140 | 31.159 | 276 | 135 | 10 | 4 | 261 | 5 | 243 | 1.52e-21 | 97.8 |
MS.gene61638.t1 | MTR_8g102400 | 66.667 | 66 | 22 | 0 | 96 | 161 | 111 | 176 | 1.74e-20 | 93.6 |
MS.gene61638.t1 | MTR_4g102840 | 40.994 | 161 | 84 | 4 | 1 | 160 | 1 | 151 | 1.91e-19 | 90.5 |
MS.gene61638.t1 | MTR_8g074730 | 63.235 | 68 | 25 | 0 | 93 | 160 | 67 | 134 | 1.94e-19 | 84.7 |
MS.gene61638.t1 | MTR_7g114870 | 61.194 | 67 | 26 | 0 | 99 | 165 | 108 | 174 | 4.49e-19 | 89.0 |
MS.gene61638.t1 | MTR_1g023760 | 33.537 | 164 | 81 | 5 | 97 | 257 | 124 | 262 | 3.63e-17 | 84.7 |
MS.gene61638.t1 | MTR_1g041430 | 48.148 | 108 | 51 | 1 | 96 | 198 | 110 | 217 | 5.88e-17 | 83.2 |
MS.gene61638.t1 | MTR_1g051810 | 35.878 | 131 | 75 | 2 | 99 | 221 | 107 | 236 | 7.00e-14 | 73.2 |
MS.gene61638.t1 | MTR_5g038620 | 49.231 | 65 | 33 | 0 | 99 | 163 | 121 | 185 | 7.48e-13 | 70.9 |
MS.gene61638.t1 | MTR_3g096568 | 35.897 | 117 | 54 | 4 | 158 | 271 | 47 | 145 | 3.43e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61638.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
MS.gene61638.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
MS.gene61638.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
MS.gene61638.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
MS.gene61638.t1 | AT2G26180 | 50.545 | 275 | 113 | 6 | 1 | 266 | 1 | 261 | 5.36e-68 | 222 |
MS.gene61638.t1 | AT1G72670 | 39.583 | 288 | 160 | 5 | 1 | 280 | 1 | 282 | 3.86e-54 | 186 |
MS.gene61638.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
MS.gene61638.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
MS.gene61638.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
MS.gene61638.t1 | AT3G52290 | 48.634 | 183 | 86 | 4 | 96 | 276 | 107 | 283 | 4.82e-46 | 165 |
MS.gene61638.t1 | AT3G09710 | 42.932 | 191 | 105 | 2 | 96 | 285 | 107 | 294 | 1.39e-42 | 156 |
MS.gene61638.t1 | AT2G33990 | 41.176 | 170 | 99 | 1 | 95 | 264 | 45 | 213 | 3.58e-41 | 147 |
MS.gene61638.t1 | AT3G15050 | 42.424 | 165 | 95 | 0 | 99 | 263 | 52 | 216 | 5.66e-41 | 147 |
MS.gene61638.t1 | AT3G09710 | 40.976 | 205 | 103 | 5 | 96 | 285 | 107 | 308 | 2.75e-40 | 150 |
MS.gene61638.t1 | AT1G17480 | 37.066 | 259 | 136 | 6 | 1 | 252 | 1 | 239 | 3.71e-40 | 147 |
MS.gene61638.t1 | AT4G00820 | 42.574 | 202 | 96 | 4 | 78 | 263 | 113 | 310 | 1.25e-39 | 149 |
MS.gene61638.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
MS.gene61638.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
MS.gene61638.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
MS.gene61638.t1 | AT3G49260 | 42.714 | 199 | 82 | 5 | 88 | 263 | 112 | 301 | 3.28e-39 | 147 |
MS.gene61638.t1 | AT2G26410 | 42.373 | 177 | 93 | 5 | 96 | 266 | 147 | 320 | 1.42e-35 | 138 |
MS.gene61638.t1 | AT2G26410 | 42.373 | 177 | 93 | 5 | 96 | 266 | 147 | 320 | 1.42e-35 | 138 |
MS.gene61638.t1 | AT1G01110 | 41.530 | 183 | 92 | 3 | 96 | 263 | 120 | 302 | 9.55e-34 | 133 |
MS.gene61638.t1 | AT3G59690 | 44.586 | 157 | 74 | 6 | 100 | 253 | 172 | 318 | 1.41e-31 | 127 |
MS.gene61638.t1 | AT3G59690 | 44.586 | 157 | 74 | 6 | 100 | 253 | 172 | 318 | 1.41e-31 | 127 |
MS.gene61638.t1 | AT4G10640 | 32.710 | 321 | 154 | 8 | 98 | 393 | 101 | 384 | 1.48e-28 | 117 |
MS.gene61638.t1 | AT5G13460 | 34.146 | 205 | 116 | 6 | 60 | 255 | 68 | 262 | 7.33e-26 | 109 |
MS.gene61638.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
MS.gene61638.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
MS.gene61638.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
MS.gene61638.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
MS.gene61638.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 325 | 471 | 1.51e-25 | 110 |
MS.gene61638.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 104 | 170 | 5.35e-23 | 100 |
MS.gene61638.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.11e-22 | 100 |
MS.gene61638.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.21e-22 | 100 |
MS.gene61638.t1 | AT4G23060 | 60.976 | 82 | 32 | 0 | 89 | 170 | 159 | 240 | 9.65e-22 | 97.8 |
MS.gene61638.t1 | AT3G16490 | 66.154 | 65 | 22 | 0 | 96 | 160 | 106 | 170 | 1.66e-20 | 93.2 |
MS.gene61638.t1 | AT5G07240 | 67.647 | 68 | 22 | 0 | 90 | 157 | 99 | 166 | 7.16e-20 | 91.7 |
MS.gene61638.t1 | AT5G07240 | 67.647 | 68 | 22 | 0 | 90 | 157 | 145 | 212 | 1.20e-19 | 91.3 |
MS.gene61638.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 31 | 200 | 1.33e-19 | 92.0 |
MS.gene61638.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 214 | 383 | 1.51e-19 | 92.0 |
MS.gene61638.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
MS.gene61638.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
MS.gene61638.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
MS.gene61638.t1 | AT1G51960 | 61.644 | 73 | 27 | 1 | 93 | 164 | 95 | 167 | 1.80e-19 | 89.7 |
MS.gene61638.t1 | AT1G74690 | 40.441 | 136 | 67 | 3 | 33 | 163 | 53 | 179 | 6.66e-19 | 89.7 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
MS.gene61638.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
MS.gene61638.t1 | AT1G14380 | 29.478 | 268 | 147 | 9 | 1 | 260 | 1 | 234 | 6.83e-18 | 86.7 |
MS.gene61638.t1 | AT3G51380 | 64.615 | 65 | 23 | 0 | 94 | 158 | 34 | 98 | 8.52e-18 | 79.0 |
MS.gene61638.t1 | AT5G62070 | 67.742 | 62 | 20 | 0 | 90 | 151 | 110 | 171 | 4.08e-17 | 83.2 |
MS.gene61638.t1 | AT3G49380 | 64.615 | 65 | 23 | 0 | 99 | 163 | 112 | 176 | 6.20e-17 | 82.4 |
MS.gene61638.t1 | AT4G29150 | 63.077 | 65 | 24 | 0 | 96 | 160 | 130 | 194 | 2.68e-16 | 80.9 |
MS.gene61638.t1 | AT5G35670 | 34.921 | 189 | 107 | 6 | 96 | 278 | 159 | 337 | 1.31e-15 | 79.0 |
MS.gene61638.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.92e-13 | 70.1 |
MS.gene61638.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.92e-13 | 70.1 |
MS.gene61638.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 109 | 234 | 1.03e-12 | 69.7 |
MS.gene61638.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.96e-11 | 65.1 |
MS.gene61638.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.96e-11 | 65.1 |
MS.gene61638.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 9.97e-11 | 64.3 |
Find 110 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTGTCTCTTTAATATTT+TGG | 0.074947 | 4.1:+47381122 | None:intergenic |
TGAACATTTGCATTAGATTT+TGG | 0.157733 | 4.1:+47379595 | None:intergenic |
GTTAGATCTGGTAGGATATT+TGG | 0.217923 | 4.1:+47379117 | None:intergenic |
GCTTGTGAGTTTCTCTCCTT+TGG | 0.232536 | 4.1:+47379517 | None:intergenic |
ACAACGCTTGGATGAATATT+TGG | 0.234812 | 4.1:+47379718 | None:intergenic |
AGGCAGCAGGCCGTTTCTTC+AGG | 0.270335 | 4.1:-47379928 | MS.gene61638:CDS |
CACATTTCCATCCTTCTCTA+AGG | 0.275439 | 4.1:+47383501 | None:intergenic |
GAAGCACGCAAAAGCCTATA+AGG | 0.279293 | 4.1:-47379081 | MS.gene61638:CDS |
AACAGCGTTTCGTGGATTTC+TGG | 0.282468 | 4.1:-47382393 | MS.gene61638:intron |
AGCTTAGGTTTATCCCTTAT+AGG | 0.329649 | 4.1:+47379067 | None:intergenic |
GTGAAGTAGAAGGAGAATAA+TGG | 0.331113 | 4.1:+47382483 | None:intergenic |
AATGGGCTTCAAGGTTTGAT+TGG | 0.343344 | 4.1:+47382501 | None:intergenic |
AAAGCAGTTGGGGTTGGAAT+TGG | 0.353714 | 4.1:-47379891 | MS.gene61638:CDS |
GAGAGTTCAGGCTCGTGTTC+GGG | 0.366984 | 4.1:-47381516 | MS.gene61638:CDS |
GCAAGCTTTGGTGAGAGTTC+AGG | 0.371238 | 4.1:-47381528 | MS.gene61638:CDS |
GTTGGAATTGGTTGGAAAGA+TGG | 0.381054 | 4.1:-47379879 | MS.gene61638:CDS |
ATGGGCTTCAAGGTTTGATT+GGG | 0.381657 | 4.1:+47382502 | None:intergenic |
GAAGAAACCAACTCAAAATC+TGG | 0.385612 | 4.1:-47379562 | MS.gene61638:CDS |
TTACTGCATGGCCTCTTACA+AGG | 0.407942 | 4.1:+47381582 | None:intergenic |
AAGGAGAATAATGGGCTTCA+AGG | 0.408085 | 4.1:+47382492 | None:intergenic |
TGAGAGTTCAGGCTCGTGTT+CGG | 0.416787 | 4.1:-47381517 | MS.gene61638:CDS |
TCCCCTCCTCCATTGAGCTT+AGG | 0.419990 | 4.1:+47379052 | None:intergenic |
ATCAAATCACGAGCGAAGAA+TGG | 0.421607 | 4.1:-47382433 | MS.gene61638:CDS |
GATGTTATGGATGGTAGAAA+TGG | 0.422170 | 4.1:-47379784 | MS.gene61638:CDS |
TGAACCTGATAAAAGCAGTT+GGG | 0.424024 | 4.1:-47379902 | MS.gene61638:CDS |
TGAAGTAGAAGGAGAATAAT+GGG | 0.424231 | 4.1:+47382484 | None:intergenic |
AATGATGGTGCTGCACCTAT+TGG | 0.424678 | 4.1:-47382545 | MS.gene61638:CDS |
GGCATATGCTCTAGCTCATC+AGG | 0.427400 | 4.1:-47381073 | MS.gene61638:intron |
TTTGAGTTGGTTTCTTCAAC+GGG | 0.429692 | 4.1:+47379568 | None:intergenic |
TGCATTCAAACAGCGTTTCG+TGG | 0.439864 | 4.1:-47382401 | MS.gene61638:CDS |
GATGGATGGCTGTACGTCCT+TGG | 0.444202 | 4.1:-47379861 | MS.gene61638:CDS |
CAAAGCTCGTAGTGCTCTCC+TGG | 0.445869 | 4.1:+47381628 | None:intergenic |
ATGGATGGCTGTACGTCCTT+GGG | 0.447160 | 4.1:-47379860 | MS.gene61638:CDS |
AAACTCACAAGCAGATAAAC+AGG | 0.449156 | 4.1:-47379506 | MS.gene61638:CDS |
TCTCCGTTGTATGCAAGCTT+TGG | 0.449466 | 4.1:-47381540 | MS.gene61638:CDS |
GGTAGACGAAAATGATGTTA+TGG | 0.450653 | 4.1:-47379797 | MS.gene61638:CDS |
AAGGCGTGTTCGCTTGTCAT+TGG | 0.452023 | 4.1:-47381492 | MS.gene61638:CDS |
TGTCCCTTTCACGTTAGATC+TGG | 0.453777 | 4.1:+47379105 | None:intergenic |
TCCACTTTGCAGTGGCAGGC+AGG | 0.454817 | 4.1:-47379955 | MS.gene61638:intron |
AATGCTCTAATCCACTTGCC+TGG | 0.459539 | 4.1:+47383556 | None:intergenic |
AGCCAAAATATTAAAGAGAC+AGG | 0.460505 | 4.1:-47381124 | MS.gene61638:CDS |
GCAGGCAGGATCAAGGCAGC+AGG | 0.462311 | 4.1:-47379941 | MS.gene61638:CDS |
CTTGACATTAATACGAAGGA+TGG | 0.470311 | 4.1:-47379826 | MS.gene61638:CDS |
CAACGGAATTCTTTCTCCGA+TGG | 0.472036 | 4.1:+47382603 | None:intergenic |
TACTGCATGGCCTCTTACAA+GGG | 0.472086 | 4.1:+47381583 | None:intergenic |
ACATGATCTACATCTCCAAT+AGG | 0.472443 | 4.1:+47382530 | None:intergenic |
CTGATAAAAGCAGTTGGGGT+TGG | 0.473450 | 4.1:-47379897 | MS.gene61638:CDS |
CAAAATGAGTTTGACAATGA+TGG | 0.481901 | 4.1:-47382560 | MS.gene61638:CDS |
TCAAATCACGAGCGAAGAAT+GGG | 0.482710 | 4.1:-47382432 | MS.gene61638:CDS |
TGTACTTGTTGTGAAGTAGA+AGG | 0.484072 | 4.1:+47382473 | None:intergenic |
TTCAGGCTCGTGTTCGGGCA+AGG | 0.490486 | 4.1:-47381511 | MS.gene61638:CDS |
AGCGTTGTCAGTCACAAAAC+CGG | 0.494399 | 4.1:-47379703 | MS.gene61638:CDS |
CTACCAGATCTAACGTGAAA+GGG | 0.494835 | 4.1:-47379108 | MS.gene61638:CDS |
CTTGTTTGGTACAGGAAGGT+TGG | 0.497244 | 4.1:-47381179 | MS.gene61638:intron |
AGGCAAGTGGATTAGAGCAT+TGG | 0.498452 | 4.1:-47383554 | MS.gene61638:CDS |
GAGAACAAACTCACCATGGT+TGG | 0.502802 | 4.1:+47379462 | None:intergenic |
GAGCTTTGAAAGGATTGGTA+AGG | 0.506231 | 4.1:-47381613 | MS.gene61638:CDS |
CAGTTGGGGTTGGAATTGGT+TGG | 0.508731 | 4.1:-47379887 | MS.gene61638:CDS |
TTCTACTTCACAACAAGTAC+AGG | 0.509033 | 4.1:-47382471 | MS.gene61638:CDS |
TTTAGCAGGGGTTGGTTCCG+GGG | 0.509172 | 4.1:-47379149 | MS.gene61638:intron |
AGGCTTCAAGCCCTTGTAAG+AGG | 0.511278 | 4.1:-47381593 | MS.gene61638:CDS |
AGGTTCAAATCCTGAAGAAA+CGG | 0.515201 | 4.1:+47379918 | None:intergenic |
AAACCTAAGCTCAATGGAGG+AGG | 0.518311 | 4.1:-47379055 | MS.gene61638:CDS |
AGGGATAAACCTAAGCTCAA+TGG | 0.520197 | 4.1:-47379061 | MS.gene61638:CDS |
AAGCACGCAAAAGCCTATAA+GGG | 0.522176 | 4.1:-47379080 | MS.gene61638:CDS |
AGAACAAACTCACCATGGTT+GGG | 0.522573 | 4.1:+47379463 | None:intergenic |
TAGATTGCAATGGGTGTCCC+AGG | 0.522581 | 4.1:-47383574 | None:intergenic |
ACTACGAGCTTTGAAAGGAT+TGG | 0.522803 | 4.1:-47381618 | MS.gene61638:CDS |
GCCATCAGAAAGTGAAGGGC+CGG | 0.529950 | 4.1:+47379684 | None:intergenic |
GTGTTAGTAGACTTGAACTG+AGG | 0.533731 | 4.1:+47379754 | None:intergenic |
TGCAGTGGCAGGCAGGATCA+AGG | 0.534616 | 4.1:-47379948 | MS.gene61638:intron |
ACCGGCCCTTCACTTTCTGA+TGG | 0.540369 | 4.1:-47379685 | MS.gene61638:CDS |
CGTGAATCCTTAGAGAAGGA+TGG | 0.540618 | 4.1:-47383508 | MS.gene61638:CDS |
GAACCTGATAAAAGCAGTTG+GGG | 0.546214 | 4.1:-47379901 | MS.gene61638:CDS |
TCTTCCACTAGCAAGTCAGC+AGG | 0.546756 | 4.1:-47379652 | MS.gene61638:CDS |
TTGAACCTGATAAAAGCAGT+TGG | 0.552298 | 4.1:-47379903 | MS.gene61638:CDS |
ATATTTGGCTGTTTGAGCCC+CGG | 0.556821 | 4.1:+47379132 | None:intergenic |
CCTACCAGATCTAACGTGAA+AGG | 0.557151 | 4.1:-47379109 | MS.gene61638:CDS |
ATGCTCTAATCCACTTGCCT+GGG | 0.560979 | 4.1:+47383557 | None:intergenic |
AGTTACACAACTGTGGGCGG+TGG | 0.571814 | 4.1:+47379007 | None:intergenic |
GTGATTTGATGATTATGTGC+AGG | 0.572761 | 4.1:+47382446 | None:intergenic |
ACCTAAGCTCAATGGAGGAG+GGG | 0.573382 | 4.1:-47379053 | MS.gene61638:CDS |
GACGAAAATGATGTTATGGA+TGG | 0.577697 | 4.1:-47379793 | MS.gene61638:CDS |
CAATGGGTGTCCCAGGCAAG+TGG | 0.584203 | 4.1:-47383567 | MS.gene61638:CDS |
AGAGCACTACGAGCTTTGAA+AGG | 0.590621 | 4.1:-47381623 | MS.gene61638:CDS |
CAAACCTGCTGACTTGCTAG+TGG | 0.597084 | 4.1:+47379648 | None:intergenic |
ATGCATAGTTACACAACTGT+GGG | 0.597446 | 4.1:+47379001 | None:intergenic |
AAAGCGTGAATCCTTAGAGA+AGG | 0.597984 | 4.1:-47383512 | MS.gene61638:CDS |
AACCTAAGCTCAATGGAGGA+GGG | 0.601091 | 4.1:-47379054 | MS.gene61638:CDS |
AGGCTAGCAAGTTTCGCCAT+CGG | 0.603223 | 4.1:-47382619 | MS.gene61638:CDS |
GAATTGGTTGGAAAGATGGA+TGG | 0.603840 | 4.1:-47379875 | MS.gene61638:CDS |
AAGATCTCAAAGTAATCCAA+AGG | 0.605081 | 4.1:-47379533 | MS.gene61638:CDS |
CACAGCCATCAGAAAGTGAA+GGG | 0.617780 | 4.1:+47379680 | None:intergenic |
TCACAGCCATCAGAAAGTGA+AGG | 0.617863 | 4.1:+47379679 | None:intergenic |
TAATACGAAGGATGGAGTGA+AGG | 0.620363 | 4.1:-47379818 | MS.gene61638:CDS |
AAGTGGATTAGAGCATTGGT+TGG | 0.632093 | 4.1:-47383550 | MS.gene61638:CDS |
CAAAATATTAAAGAGACAGG+AGG | 0.633283 | 4.1:-47381121 | MS.gene61638:CDS |
CCTTTCACGTTAGATCTGGT+AGG | 0.633476 | 4.1:+47379109 | None:intergenic |
TGGGCTTCAAGGTTTGATTG+GGG | 0.636004 | 4.1:+47382503 | None:intergenic |
AGCAAAACGTGAGAGAGCCA+TGG | 0.642186 | 4.1:-47381094 | MS.gene61638:CDS |
CGATTATCTCTTCCCAACCA+TGG | 0.644366 | 4.1:-47379475 | MS.gene61638:intron |
TCAAGAAAACGATTCTCCCA+AGG | 0.647063 | 4.1:+47379844 | None:intergenic |
AATGCATAGTTACACAACTG+TGG | 0.650428 | 4.1:+47379000 | None:intergenic |
TCACCAAAGCTTGCATACAA+CGG | 0.650453 | 4.1:+47381537 | None:intergenic |
GATAAACCTAAGCTCAATGG+AGG | 0.654380 | 4.1:-47379058 | MS.gene61638:CDS |
GGAAGGTTGGTGTGACAGTG+TGG | 0.655505 | 4.1:-47381166 | MS.gene61638:CDS |
CATAGTTACACAACTGTGGG+CGG | 0.663558 | 4.1:+47379004 | None:intergenic |
AATTCCGTTGAAATTGACAA+CGG | 0.663667 | 4.1:-47382590 | MS.gene61638:CDS |
ATGAGCTAGAGCATATGCCA+TGG | 0.669679 | 4.1:+47381077 | None:intergenic |
GAAGGTTGGTGTGACAGTGT+GGG | 0.697609 | 4.1:-47381165 | MS.gene61638:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATGTTAATAAATAG+TGG | + | chr4.1:47380434-47380453 | None:intergenic | 10.0% |
!! | CAAAATATCTTATAATATTT+GGG | + | chr4.1:47379646-47379665 | None:intergenic | 10.0% |
!!! | ATTTTCTTTTCTATAAATTA+AGG | - | chr4.1:47381804-47381823 | MS.gene61638:intron | 10.0% |
!!! | GTTATTTTGTTTTATTAATA+TGG | - | chr4.1:47381194-47381213 | MS.gene61638:intron | 10.0% |
!! | CAATCAGATAAAAAAAAAAA+AGG | + | chr4.1:47379702-47379721 | None:intergenic | 15.0% |
!! | GAAAGATTAATCAAATATAA+TGG | + | chr4.1:47381566-47381585 | None:intergenic | 15.0% |
!! | GCAAAATATCTTATAATATT+TGG | + | chr4.1:47379647-47379666 | None:intergenic | 15.0% |
!! | TAATAAAACAAAATAACCAT+GGG | + | chr4.1:47381191-47381210 | None:intergenic | 15.0% |
!! | TTAATAAAACAAAATAACCA+TGG | + | chr4.1:47381192-47381211 | None:intergenic | 15.0% |
!!! | AATTGCAAAGAAAATAATTT+TGG | + | chr4.1:47382425-47382444 | None:intergenic | 15.0% |
!!! | ACTAGAATTTCATTAATTTT+AGG | + | chr4.1:47382196-47382215 | None:intergenic | 15.0% |
!!! | CTAGAATTTCATTAATTTTA+GGG | + | chr4.1:47382195-47382214 | None:intergenic | 15.0% |
!!! | TTTTTCCTTATTAATATGAT+AGG | + | chr4.1:47382096-47382115 | None:intergenic | 15.0% |
!! | AATAAAACATTGCAAAATTG+GGG | + | chr4.1:47382375-47382394 | None:intergenic | 20.0% |
!! | ACACATTATTCAAAAAGATT+TGG | + | chr4.1:47383362-47383381 | None:intergenic | 20.0% |
!! | AGAATAAAACATTGCAAAAT+TGG | + | chr4.1:47382377-47382396 | None:intergenic | 20.0% |
!! | ATAGTTTAACAATATGAAAG+TGG | + | chr4.1:47379783-47379802 | None:intergenic | 20.0% |
!! | GAATAAAACATTGCAAAATT+GGG | + | chr4.1:47382376-47382395 | None:intergenic | 20.0% |
!! | GGTGATAATATAATACAATA+AGG | + | chr4.1:47383152-47383171 | None:intergenic | 20.0% |
!! | TAAAATTGCAAATTTCAAAG+AGG | - | chr4.1:47381717-47381736 | MS.gene61638:intron | 20.0% |
!! | TCATTCAAATCTGTATATTA+AGG | - | chr4.1:47379361-47379380 | MS.gene61638:intron | 20.0% |
!! | TGAATAATGTGTTAGATTAA+TGG | - | chr4.1:47383370-47383389 | MS.gene61638:intron | 20.0% |
!! | TTATCTCTTTATACTTGAAT+AGG | - | chr4.1:47380298-47380317 | MS.gene61638:intron | 20.0% |
!! | TTATTCCCTTATATTATCTA+TGG | - | chr4.1:47382535-47382554 | MS.gene61638:CDS | 20.0% |
!! | TTCATGAAATTAATAATCCT+TGG | - | chr4.1:47382218-47382237 | MS.gene61638:intron | 20.0% |
!! | TTTGCAATTATAAGTATGAA+GGG | - | chr4.1:47382436-47382455 | MS.gene61638:CDS | 20.0% |
!!! | ATTACTTTTGCTTAGAATTT+GGG | - | chr4.1:47380361-47380380 | MS.gene61638:intron | 20.0% |
!!! | CAGAATAAGTTTTTAAGTTA+GGG | + | chr4.1:47380855-47380874 | None:intergenic | 20.0% |
!!! | TATTACTTTTGCTTAGAATT+TGG | - | chr4.1:47380360-47380379 | MS.gene61638:intron | 20.0% |
!!! | TCAGAATAAGTTTTTAAGTT+AGG | + | chr4.1:47380856-47380875 | None:intergenic | 20.0% |
!!! | TTATTTATCACAACATTTTG+AGG | - | chr4.1:47380227-47380246 | MS.gene61638:intron | 20.0% |
! | AAATTTACGATTCCATCTTA+TGG | - | chr4.1:47381525-47381544 | MS.gene61638:CDS | 25.0% |
! | AAGTAATTACTTACATCTCA+CGG | + | chr4.1:47381671-47381690 | None:intergenic | 25.0% |
! | AATCATTTACTACTAGGTAA+GGG | - | chr4.1:47381960-47381979 | MS.gene61638:intron | 25.0% |
! | AATCCTAATCATTTACTACT+AGG | - | chr4.1:47381954-47381973 | MS.gene61638:intron | 25.0% |
! | ACAAGTCATGAATAGTATAA+AGG | + | chr4.1:47379147-47379166 | None:intergenic | 25.0% |
! | ACGATCCTATCATATTAATA+AGG | - | chr4.1:47382088-47382107 | MS.gene61638:intron | 25.0% |
! | ATAAACTGTCTGATCAAAAT+TGG | + | chr4.1:47383257-47383276 | None:intergenic | 25.0% |
! | ATTTGCGAATTTAGTATGAT+CGG | + | chr4.1:47383291-47383310 | None:intergenic | 25.0% |
! | CAAGACAAAAAACTTAGAAA+TGG | + | chr4.1:47383402-47383421 | None:intergenic | 25.0% |
! | CCATCTTATGGAAATTAAAT+GGG | - | chr4.1:47381537-47381556 | MS.gene61638:CDS | 25.0% |
! | CTTTGCAATTATAAGTATGA+AGG | - | chr4.1:47382435-47382454 | MS.gene61638:CDS | 25.0% |
! | GCCAAAAAAATTAACTCATA+CGG | - | chr4.1:47379240-47379259 | MS.gene61638:intron | 25.0% |
! | GTTTATTGAGTCATAGAATA+TGG | - | chr4.1:47381901-47381920 | MS.gene61638:intron | 25.0% |
! | TAAAATGCTTATATCTACCA+AGG | - | chr4.1:47380759-47380778 | MS.gene61638:intron | 25.0% |
! | TAAACATTTAGTTGCTAACA+AGG | - | chr4.1:47380882-47380901 | MS.gene61638:intron | 25.0% |
! | TAATCATTTACTACTAGGTA+AGG | - | chr4.1:47381959-47381978 | MS.gene61638:intron | 25.0% |
! | TCAAGTATAAAGAGATAAAG+AGG | + | chr4.1:47380296-47380315 | None:intergenic | 25.0% |
! | TCCATCTTATGGAAATTAAA+TGG | - | chr4.1:47381536-47381555 | MS.gene61638:CDS | 25.0% |
! | TCTGATACCAACTTAAATTT+GGG | - | chr4.1:47380571-47380590 | MS.gene61638:intron | 25.0% |
! | TGTGTCCATAGATAATATAA+GGG | + | chr4.1:47382543-47382562 | None:intergenic | 25.0% |
! | TTACCTAGTAGTAAATGATT+AGG | + | chr4.1:47381960-47381979 | None:intergenic | 25.0% |
! | TTGTGTCCATAGATAATATA+AGG | + | chr4.1:47382544-47382563 | None:intergenic | 25.0% |
! | TTTATATTCCTGAAATCCAA+AGG | - | chr4.1:47379303-47379322 | MS.gene61638:intron | 25.0% |
!! | AAACATATTTTTCCCATTGA+TGG | + | chr4.1:47380706-47380725 | None:intergenic | 25.0% |
!! | AATTGCTATTCTAGTATATG+TGG | - | chr4.1:47381602-47381621 | MS.gene61638:CDS | 25.0% |
!! | AGTTATTGCATTTGTACTTT+TGG | - | chr4.1:47379170-47379189 | MS.gene61638:intron | 25.0% |
!! | ATGTTTTACCCTTAAAAATC+AGG | - | chr4.1:47380720-47380739 | MS.gene61638:intron | 25.0% |
!! | GCTATAAAATGTTTCTAAAC+AGG | - | chr4.1:47381829-47381848 | MS.gene61638:intron | 25.0% |
!! | GTTGGTTACATAATGTTTTA+GGG | - | chr4.1:47381765-47381784 | MS.gene61638:intron | 25.0% |
!! | TGAACATTTGCATTAGATTT+TGG | + | chr4.1:47382982-47383001 | None:intergenic | 25.0% |
!! | TGATATTTTCAATAATCAGC+AGG | - | chr4.1:47379935-47379954 | MS.gene61638:CDS | 25.0% |
!! | TTTTCTTGACATTAATACGA+AGG | - | chr4.1:47382744-47382763 | MS.gene61638:intron | 25.0% |
!!! | GTATGAGTTAATTTTTTTGG+CGG | + | chr4.1:47379241-47379260 | None:intergenic | 25.0% |
!!! | TCCGTATGAGTTAATTTTTT+TGG | + | chr4.1:47379244-47379263 | None:intergenic | 25.0% |
!!! | TTACATAATGTTTTAGGGAA+AGG | - | chr4.1:47381770-47381789 | MS.gene61638:intron | 25.0% |
!!! | TTTTGTCTTGTATTTTAGCA+GGG | - | chr4.1:47383412-47383431 | MS.gene61638:intron | 25.0% |
!!! | TTTTTGTCTTGTATTTTAGC+AGG | - | chr4.1:47383411-47383430 | MS.gene61638:intron | 25.0% |
AAATTTCAAAATGATCCCTC+AGG | + | chr4.1:47382290-47382309 | None:intergenic | 30.0% | |
AAGATCTCAAAGTAATCCAA+AGG | - | chr4.1:47383041-47383060 | MS.gene61638:intron | 30.0% | |
AATTCCGTTGAAATTGACAA+CGG | - | chr4.1:47379984-47380003 | MS.gene61638:intron | 30.0% | |
AATTGCAAATTTCAAAGAGG+AGG | - | chr4.1:47381720-47381739 | MS.gene61638:intron | 30.0% | |
AATTTCAAAATGATCCCTCA+GGG | + | chr4.1:47382289-47382308 | None:intergenic | 30.0% | |
AATTTGAAAATGAACTGCAG+AGG | - | chr4.1:47382009-47382028 | MS.gene61638:intron | 30.0% | |
AGCCAAAATATTAAAGAGAC+AGG | - | chr4.1:47381450-47381469 | MS.gene61638:CDS | 30.0% | |
ATAAATCAGTCCTTAATGCT+TGG | + | chr4.1:47379572-47379591 | None:intergenic | 30.0% | |
ATACAAAAGACCAAGCATTA+AGG | - | chr4.1:47379559-47379578 | MS.gene61638:CDS | 30.0% | |
ATACCAACTTAAATTTGGGT+TGG | - | chr4.1:47380575-47380594 | MS.gene61638:intron | 30.0% | |
ATCATTTACTACTAGGTAAG+GGG | - | chr4.1:47381961-47381980 | MS.gene61638:intron | 30.0% | |
CAAAATATTAAAGAGACAGG+AGG | - | chr4.1:47381453-47381472 | MS.gene61638:CDS | 30.0% | |
CAAAATGAGTTTGACAATGA+TGG | - | chr4.1:47380014-47380033 | MS.gene61638:intron | 30.0% | |
CAACTGAAAATATGAACCAA+AGG | + | chr4.1:47382577-47382596 | None:intergenic | 30.0% | |
CATTTCAAGATAAACAAAGC+AGG | + | chr4.1:47380793-47380812 | None:intergenic | 30.0% | |
CTCTGATACCAACTTAAATT+TGG | - | chr4.1:47380570-47380589 | MS.gene61638:intron | 30.0% | |
CTGGCTATTCTATAATTTCA+TGG | - | chr4.1:47379869-47379888 | MS.gene61638:CDS | 30.0% | |
CTTACAAACCAGTTTCATAA+GGG | + | chr4.1:47380400-47380419 | None:intergenic | 30.0% | |
GATGATATTTGTGAAGCATA+TGG | - | chr4.1:47382116-47382135 | MS.gene61638:intron | 30.0% | |
GTTCTATGATCATCTATCAT+TGG | - | chr4.1:47381870-47381889 | MS.gene61638:intron | 30.0% | |
TCTTACAAACCAGTTTCATA+AGG | + | chr4.1:47380401-47380420 | None:intergenic | 30.0% | |
TGAAGTAGAAGGAGAATAAT+GGG | + | chr4.1:47380093-47380112 | None:intergenic | 30.0% | |
TGTAATTCCATAGACGAAAT+TGG | - | chr4.1:47382342-47382361 | MS.gene61638:intron | 30.0% | |
TTAAAAATCAGGCATTACAG+TGG | - | chr4.1:47380731-47380750 | MS.gene61638:intron | 30.0% | |
TTAATCAAACACACTTCCTT+TGG | + | chr4.1:47379322-47379341 | None:intergenic | 30.0% | |
TTCATTGACAAGAATTTGCA+CGG | + | chr4.1:47381991-47382010 | None:intergenic | 30.0% | |
! | ACTGTAATGCCTGATTTTTA+AGG | + | chr4.1:47380732-47380751 | None:intergenic | 30.0% |
! | ATTACAAGCTTTTGGCAATT+TGG | + | chr4.1:47382328-47382347 | None:intergenic | 30.0% |
! | CAGTTAAAGACCTGAAATTT+TGG | - | chr4.1:47379420-47379439 | MS.gene61638:intron | 30.0% |
! | CCCATTTAATTTCCATAAGA+TGG | + | chr4.1:47381540-47381559 | None:intergenic | 30.0% |
! | CTCCTGTCTCTTTAATATTT+TGG | + | chr4.1:47381455-47381474 | None:intergenic | 30.0% |
! | CTGTAATGCCTGATTTTTAA+GGG | + | chr4.1:47380731-47380750 | None:intergenic | 30.0% |
! | TCTATGGAATTACAAGCTTT+TGG | + | chr4.1:47382336-47382355 | None:intergenic | 30.0% |
! | TTTTCCGTTGTCAATTTCAA+CGG | + | chr4.1:47379991-47380010 | None:intergenic | 30.0% |
! | TTTTGCTTAGAATTTGGGTA+GGG | - | chr4.1:47380366-47380385 | MS.gene61638:intron | 30.0% |
!! | CATACAAGTCAGTTTTGTAA+GGG | + | chr4.1:47380612-47380631 | None:intergenic | 30.0% |
!! | GGTTGGTTACATAATGTTTT+AGG | - | chr4.1:47381764-47381783 | MS.gene61638:intron | 30.0% |
!!! | ATAATGTTTTAGGGAAAGGT+TGG | - | chr4.1:47381774-47381793 | MS.gene61638:intron | 30.0% |
!!! | GCATTAGATTTTGGTTTAAC+AGG | + | chr4.1:47382973-47382992 | None:intergenic | 30.0% |
!!! | TAATGTTTTAGGGAAAGGTT+GGG | - | chr4.1:47381775-47381794 | MS.gene61638:intron | 30.0% |
!!! | TTTGTCTTGTATTTTAGCAG+GGG | - | chr4.1:47383413-47383432 | MS.gene61638:intron | 30.0% |
AAACTCACAAGCAGATAAAC+AGG | - | chr4.1:47383068-47383087 | MS.gene61638:intron | 35.0% | |
AATTAGAGCTCAATAGCATC+TGG | + | chr4.1:47381930-47381949 | None:intergenic | 35.0% | |
AATTGGAGAGTGATTCTTTG+TGG | + | chr4.1:47383240-47383259 | None:intergenic | 35.0% | |
ACAACGCTTGGATGAATATT+TGG | + | chr4.1:47382859-47382878 | None:intergenic | 35.0% | |
ACACAACACATTGTTTCCTT+TGG | - | chr4.1:47382558-47382577 | MS.gene61638:CDS | 35.0% | |
ACAGTTTCCTTGTAAGTTAG+CGG | - | chr4.1:47383317-47383336 | MS.gene61638:intron | 35.0% | |
ACATGACACAAGTGATCAAA+AGG | + | chr4.1:47381308-47381327 | None:intergenic | 35.0% | |
ACATGATCTACATCTCCAAT+AGG | + | chr4.1:47380047-47380066 | None:intergenic | 35.0% | |
ACCACTTATAAACCCATTTG+CGG | - | chr4.1:47380645-47380664 | MS.gene61638:intron | 35.0% | |
ACCCGACTGCTAAAATATTA+GGG | + | chr4.1:47382167-47382186 | None:intergenic | 35.0% | |
AGCTTAGGTTTATCCCTTAT+AGG | + | chr4.1:47383510-47383529 | None:intergenic | 35.0% | |
AGGAGGTGGTTGATTAATTT+AGG | - | chr4.1:47381737-47381756 | MS.gene61638:intron | 35.0% | |
AGGTTCAAATCCTGAAGAAA+CGG | + | chr4.1:47382659-47382678 | None:intergenic | 35.0% | |
ATAAGGGAATAACAACTGAC+AGG | + | chr4.1:47382527-47382546 | None:intergenic | 35.0% | |
ATTGGAGAGTGATTCTTTGT+GGG | + | chr4.1:47383239-47383258 | None:intergenic | 35.0% | |
CAAAGCAGGAAAATAAACCT+TGG | + | chr4.1:47380779-47380798 | None:intergenic | 35.0% | |
CAAAGGGAATTATATGACCA+AGG | + | chr4.1:47382238-47382257 | None:intergenic | 35.0% | |
CAACAAATCTAACCAACTGT+GGG | - | chr4.1:47380905-47380924 | MS.gene61638:intron | 35.0% | |
CTTGACATTAATACGAAGGA+TGG | - | chr4.1:47382748-47382767 | MS.gene61638:intron | 35.0% | |
GAAGAAACCAACTCAAAATC+TGG | - | chr4.1:47383012-47383031 | MS.gene61638:intron | 35.0% | |
GACGAAAATGATGTTATGGA+TGG | - | chr4.1:47382781-47382800 | MS.gene61638:intron | 35.0% | |
GATGTTATGGATGGTAGAAA+TGG | - | chr4.1:47382790-47382809 | MS.gene61638:intron | 35.0% | |
GGAGGTGGTTGATTAATTTA+GGG | - | chr4.1:47381738-47381757 | MS.gene61638:intron | 35.0% | |
GGTAGACGAAAATGATGTTA+TGG | - | chr4.1:47382777-47382796 | MS.gene61638:intron | 35.0% | |
GTGAAGTAGAAGGAGAATAA+TGG | + | chr4.1:47380094-47380113 | None:intergenic | 35.0% | |
GTGTATTTCTCGTACTTGTT+TGG | - | chr4.1:47381381-47381400 | MS.gene61638:intron | 35.0% | |
GTTAACTACCCTTATGAAAC+TGG | - | chr4.1:47380389-47380408 | MS.gene61638:intron | 35.0% | |
GTTAGATCTGGTAGGATATT+TGG | + | chr4.1:47383460-47383479 | None:intergenic | 35.0% | |
GTTCCAACCCAAATTTAAGT+TGG | + | chr4.1:47380581-47380600 | None:intergenic | 35.0% | |
GTTGTTAAGTTCTCACTACA+AGG | - | chr4.1:47379449-47379468 | MS.gene61638:intron | 35.0% | |
TAAGGGAATAACAACTGACA+GGG | + | chr4.1:47382526-47382545 | None:intergenic | 35.0% | |
TAATTACTTACATCTCACGG+TGG | + | chr4.1:47381668-47381687 | None:intergenic | 35.0% | |
TACCCGACTGCTAAAATATT+AGG | + | chr4.1:47382168-47382187 | None:intergenic | 35.0% | |
TAGTGAGAACTTAACAACGT+TGG | + | chr4.1:47379447-47379466 | None:intergenic | 35.0% | |
TATAAACCAAGCAAGGTGAA+CGG | + | chr4.1:47379289-47379308 | None:intergenic | 35.0% | |
TATCATTAGTCCTTCTCATC+AGG | - | chr4.1:47381625-47381644 | MS.gene61638:CDS | 35.0% | |
TCAAAAATCACTGCAAGTGA+AGG | + | chr4.1:47382038-47382057 | None:intergenic | 35.0% | |
TCAACTCTATGTTCTGCTAT+CGG | - | chr4.1:47379518-47379537 | MS.gene61638:CDS | 35.0% | |
TCAGGAATATAAACCAAGCA+AGG | + | chr4.1:47379296-47379315 | None:intergenic | 35.0% | |
TCCTTAACACTTCCATCAAT+GGG | - | chr4.1:47380691-47380710 | MS.gene61638:intron | 35.0% | |
TGAACCTGATAAAAGCAGTT+GGG | - | chr4.1:47382672-47382691 | MS.gene61638:intron | 35.0% | |
TGGTTGATTAATTTAGGGAC+TGG | - | chr4.1:47381743-47381762 | MS.gene61638:intron | 35.0% | |
TTCTACTTCACAACAAGTAC+AGG | - | chr4.1:47380103-47380122 | MS.gene61638:intron | 35.0% | |
TTGAACCTGATAAAAGCAGT+TGG | - | chr4.1:47382671-47382690 | MS.gene61638:intron | 35.0% | |
TTTGCTTAGAATTTGGGTAG+GGG | - | chr4.1:47380367-47380386 | MS.gene61638:intron | 35.0% | |
! | CAAATGGGTTTATAAGTGGT+GGG | + | chr4.1:47380645-47380664 | None:intergenic | 35.0% |
! | CTTTTGCTTAGAATTTGGGT+AGG | - | chr4.1:47380365-47380384 | MS.gene61638:intron | 35.0% |
! | GTGATTTGATGATTATGTGC+AGG | + | chr4.1:47380131-47380150 | None:intergenic | 35.0% |
! | GTGGGTCTATTTTGTGTATT+AGG | - | chr4.1:47380923-47380942 | MS.gene61638:intron | 35.0% |
! | TCTATTTTGTGTATTAGGCC+AGG | - | chr4.1:47380928-47380947 | MS.gene61638:intron | 35.0% |
! | TGATTAATTTAGGGACTGGT+TGG | - | chr4.1:47381747-47381766 | MS.gene61638:intron | 35.0% |
!! | ACTGGTTTGTAAGATGATGA+CGG | - | chr4.1:47380407-47380426 | MS.gene61638:intron | 35.0% |
!! | ACTTAAATTTGGGTTGGAAC+TGG | - | chr4.1:47380581-47380600 | MS.gene61638:intron | 35.0% |
!! | CCATACAAGTCAGTTTTGTA+AGG | + | chr4.1:47380613-47380632 | None:intergenic | 35.0% |
!! | CCTTACAAAACTGACTTGTA+TGG | - | chr4.1:47380610-47380629 | MS.gene61638:intron | 35.0% |
!! | TGCTCTAGATGTTTAGTTCT+AGG | + | chr4.1:47380499-47380518 | None:intergenic | 35.0% |
!! | TGTACTTGTTGTGAAGTAGA+AGG | + | chr4.1:47380104-47380123 | None:intergenic | 35.0% |
!! | TTAAGAGTACCACATTGGAT+GGG | + | chr4.1:47380468-47380487 | None:intergenic | 35.0% |
!! | TTGAACTCCAGATTTTGAGT+TGG | + | chr4.1:47383022-47383041 | None:intergenic | 35.0% |
!!! | AATATTTTAGCAGTCGGGTA+TGG | - | chr4.1:47382168-47382187 | MS.gene61638:intron | 35.0% |
!!! | AATGTTTTAGGGAAAGGTTG+GGG | - | chr4.1:47381776-47381795 | MS.gene61638:intron | 35.0% |
!!! | AGTTAATTTTTTTGGCGGCA+TGG | + | chr4.1:47379236-47379255 | None:intergenic | 35.0% |
!!! | GTCCCTAATATTTTAGCAGT+CGG | - | chr4.1:47382162-47382181 | MS.gene61638:intron | 35.0% |
!!! | GTTAATTTTTTTGGCGGCAT+GGG | + | chr4.1:47379235-47379254 | None:intergenic | 35.0% |
!!! | TCCCTAATATTTTAGCAGTC+GGG | - | chr4.1:47382163-47382182 | MS.gene61638:intron | 35.0% |
AAAGCGTGAATCCTTAGAGA+AGG | - | chr4.1:47379062-47379081 | MS.gene61638:CDS | 40.0% | |
AAGCACGCAAAAGCCTATAA+GGG | - | chr4.1:47383494-47383513 | MS.gene61638:intron | 40.0% | |
ACACAAAATAGACCCACAGT+TGG | + | chr4.1:47380920-47380939 | None:intergenic | 40.0% | |
ACACACTTCCTTTGGATTTC+AGG | + | chr4.1:47379314-47379333 | None:intergenic | 40.0% | |
ACCTTCAGAATGGTAAACAC+TGG | - | chr4.1:47379481-47379500 | MS.gene61638:CDS | 40.0% | |
AGAACAAACTCACCATGGTT+GGG | + | chr4.1:47383114-47383133 | None:intergenic | 40.0% | |
AGGGATAAACCTAAGCTCAA+TGG | - | chr4.1:47383513-47383532 | MS.gene61638:CDS | 40.0% | |
AGTAAGCAGTACTATTCCCA+TGG | - | chr4.1:47381172-47381191 | MS.gene61638:intron | 40.0% | |
ATCAAATCACGAGCGAAGAA+TGG | - | chr4.1:47380141-47380160 | MS.gene61638:intron | 40.0% | |
ATGGGCTTCAAGGTTTGATT+GGG | + | chr4.1:47380075-47380094 | None:intergenic | 40.0% | |
CAACGTTGGACCAAAATTTC+AGG | + | chr4.1:47379433-47379452 | None:intergenic | 40.0% | |
CACATTTCCATCCTTCTCTA+AGG | + | chr4.1:47379076-47379095 | None:intergenic | 40.0% | |
CAGTTTCCTTGTAAGTTAGC+GGG | - | chr4.1:47383318-47383337 | MS.gene61638:intron | 40.0% | |
CCACTTATAAACCCATTTGC+GGG | - | chr4.1:47380646-47380665 | MS.gene61638:intron | 40.0% | |
CTACCAGATCTAACGTGAAA+GGG | - | chr4.1:47383466-47383485 | MS.gene61638:intron | 40.0% | |
CTACTATCTATCGGACCATT+CGG | + | chr4.1:47380526-47380545 | None:intergenic | 40.0% | |
CTCCTTAACACTTCCATCAA+TGG | - | chr4.1:47380690-47380709 | MS.gene61638:intron | 40.0% | |
CTGCTTGACAAACTTCTTTC+TGG | - | chr4.1:47379850-47379869 | MS.gene61638:CDS | 40.0% | |
GAAAGAGAACAAACTCACCA+TGG | + | chr4.1:47383119-47383138 | None:intergenic | 40.0% | |
GAACCTGATAAAAGCAGTTG+GGG | - | chr4.1:47382673-47382692 | MS.gene61638:intron | 40.0% | |
GAATTGGTTGGAAAGATGGA+TGG | - | chr4.1:47382699-47382718 | MS.gene61638:intron | 40.0% | |
GATAAACCTAAGCTCAATGG+AGG | - | chr4.1:47383516-47383535 | MS.gene61638:CDS | 40.0% | |
GCAACAAATCTAACCAACTG+TGG | - | chr4.1:47380904-47380923 | MS.gene61638:intron | 40.0% | |
GCTGTTATCAACCTTCAGAA+TGG | - | chr4.1:47379471-47379490 | MS.gene61638:intron | 40.0% | |
GTGTTAGTAGACTTGAACTG+AGG | + | chr4.1:47382823-47382842 | None:intergenic | 40.0% | |
GTTGGAATTGGTTGGAAAGA+TGG | - | chr4.1:47382695-47382714 | MS.gene61638:intron | 40.0% | |
TAATACGAAGGATGGAGTGA+AGG | - | chr4.1:47382756-47382775 | MS.gene61638:intron | 40.0% | |
TACTATCTATCGGACCATTC+GGG | + | chr4.1:47380525-47380544 | None:intergenic | 40.0% | |
TCAAATCACGAGCGAAGAAT+GGG | - | chr4.1:47380142-47380161 | MS.gene61638:intron | 40.0% | |
TCAAGAAAACGATTCTCCCA+AGG | + | chr4.1:47382733-47382752 | None:intergenic | 40.0% | |
TCACCAAAGCTTGCATACAA+CGG | + | chr4.1:47381040-47381059 | None:intergenic | 40.0% | |
TCTTATCCCGCTAACTTACA+AGG | + | chr4.1:47383327-47383346 | None:intergenic | 40.0% | |
TGCAAATTTCAAAGAGGAGG+TGG | - | chr4.1:47381723-47381742 | MS.gene61638:intron | 40.0% | |
TTCTCGTACTTGTTTGGTAC+AGG | - | chr4.1:47381387-47381406 | MS.gene61638:intron | 40.0% | |
! | AATGGGCTTCAAGGTTTGAT+TGG | + | chr4.1:47380076-47380095 | None:intergenic | 40.0% |
! | AATGGTAAACACTGGCTATC+TGG | - | chr4.1:47379489-47379508 | MS.gene61638:CDS | 40.0% |
! | GCAAATGGGTTTATAAGTGG+TGG | + | chr4.1:47380646-47380665 | None:intergenic | 40.0% |
!! | AAGGAGAATAATGGGCTTCA+AGG | + | chr4.1:47380085-47380104 | None:intergenic | 40.0% |
!! | AAGTGGATTAGAGCATTGGT+TGG | - | chr4.1:47379024-47379043 | MS.gene61638:CDS | 40.0% |
!! | ACTACGAGCTTTGAAAGGAT+TGG | - | chr4.1:47380956-47380975 | MS.gene61638:intron | 40.0% |
!! | CAGCTTGTTTTCTTACTGCA+TGG | + | chr4.1:47381007-47381026 | None:intergenic | 40.0% |
!! | GAGCTTTGAAAGGATTGGTA+AGG | - | chr4.1:47380961-47380980 | MS.gene61638:intron | 40.0% |
!! | GTGTGTTAAGAGTACCACAT+TGG | + | chr4.1:47380473-47380492 | None:intergenic | 40.0% |
!! | GTTAAGAGTACCACATTGGA+TGG | + | chr4.1:47380469-47380488 | None:intergenic | 40.0% |
!! | TCCCATTGATGGAAGTGTTA+AGG | + | chr4.1:47380695-47380714 | None:intergenic | 40.0% |
!!! | ATGTTTTAGGGAAAGGTTGG+GGG | - | chr4.1:47381777-47381796 | MS.gene61638:intron | 40.0% |
!!! | GTGAATGACGAGAGTGTTTT+TGG | - | chr4.1:47379721-47379740 | MS.gene61638:CDS | 40.0% |
!!! | TCTTGTATTTTAGCAGGGGT+TGG | - | chr4.1:47383417-47383436 | MS.gene61638:intron | 40.0% |
AAACCTAAGCTCAATGGAGG+AGG | - | chr4.1:47383519-47383538 | MS.gene61638:CDS | 45.0% | |
AAAGCAGTTGGGGTTGGAAT+TGG | - | chr4.1:47382683-47382702 | MS.gene61638:intron | 45.0% | |
AACAGCGTTTCGTGGATTTC+TGG | - | chr4.1:47380181-47380200 | MS.gene61638:intron | 45.0% | |
AACCTAAGCTCAATGGAGGA+GGG | - | chr4.1:47383520-47383539 | MS.gene61638:CDS | 45.0% | |
AAGTGTTAAGGAGTCCACCT+TGG | + | chr4.1:47380683-47380702 | None:intergenic | 45.0% | |
AATGCTCTAATCCACTTGCC+TGG | + | chr4.1:47379021-47379040 | None:intergenic | 45.0% | |
ACGGTGGAGCATAACAATCA+AGG | + | chr4.1:47381652-47381671 | None:intergenic | 45.0% | |
AGACAGAGAGAGATTGAGAG+AGG | + | chr4.1:47379107-47379126 | None:intergenic | 45.0% | |
AGCGTTGTCAGTCACAAAAC+CGG | - | chr4.1:47382871-47382890 | MS.gene61638:intron | 45.0% | |
AGTCCACCTTGGATGAGATA+AGG | + | chr4.1:47380672-47380691 | None:intergenic | 45.0% | |
AGTCGATGAGATTGACGCAA+AGG | + | chr4.1:47382255-47382274 | None:intergenic | 45.0% | |
ATATTTGGCTGTTTGAGCCC+CGG | + | chr4.1:47383445-47383464 | None:intergenic | 45.0% | |
ATGAGATAAGGCCCGCAAAT+GGG | + | chr4.1:47380660-47380679 | None:intergenic | 45.0% | |
ATGAGCTAGAGCATATGCCA+TGG | + | chr4.1:47381500-47381519 | None:intergenic | 45.0% | |
ATGCTCTAATCCACTTGCCT+GGG | + | chr4.1:47379020-47379039 | None:intergenic | 45.0% | |
ATGGTCCGATAGATAGTAGG+TGG | - | chr4.1:47380527-47380546 | MS.gene61638:intron | 45.0% | |
CAACGGAATTCTTTCTCCGA+TGG | + | chr4.1:47379974-47379993 | None:intergenic | 45.0% | |
CAATCAAGGACCTGATGAGA+AGG | + | chr4.1:47381638-47381657 | None:intergenic | 45.0% | |
CACAGCCATCAGAAAGTGAA+GGG | + | chr4.1:47382897-47382916 | None:intergenic | 45.0% | |
CCTACCAGATCTAACGTGAA+AGG | - | chr4.1:47383465-47383484 | MS.gene61638:intron | 45.0% | |
CCTTTCACGTTAGATCTGGT+AGG | + | chr4.1:47383468-47383487 | None:intergenic | 45.0% | |
CGAATGGTCCGATAGATAGT+AGG | - | chr4.1:47380524-47380543 | MS.gene61638:intron | 45.0% | |
CGATTATCTCTTCCCAACCA+TGG | - | chr4.1:47383099-47383118 | MS.gene61638:intron | 45.0% | |
CGTACTTGTTTGGTACAGGA+AGG | - | chr4.1:47381391-47381410 | MS.gene61638:intron | 45.0% | |
CGTGAATCCTTAGAGAAGGA+TGG | - | chr4.1:47379066-47379085 | MS.gene61638:CDS | 45.0% | |
CTGATAAAAGCAGTTGGGGT+TGG | - | chr4.1:47382677-47382696 | MS.gene61638:intron | 45.0% | |
CTTGTTTGGTACAGGAAGGT+TGG | - | chr4.1:47381395-47381414 | MS.gene61638:intron | 45.0% | |
GAAGCACGCAAAAGCCTATA+AGG | - | chr4.1:47383493-47383512 | MS.gene61638:intron | 45.0% | |
GACAGAGAGAGATTGAGAGA+GGG | + | chr4.1:47379106-47379125 | None:intergenic | 45.0% | |
GAGAACAAACTCACCATGGT+TGG | + | chr4.1:47383115-47383134 | None:intergenic | 45.0% | |
GCCAGTGTTTACCATTCTGA+AGG | + | chr4.1:47379485-47379504 | None:intergenic | 45.0% | |
GCTTGTGAGTTTCTCTCCTT+TGG | + | chr4.1:47383060-47383079 | None:intergenic | 45.0% | |
GTACCACATTGGATGGGATA+AGG | + | chr4.1:47380462-47380481 | None:intergenic | 45.0% | |
GTCGATGAGATTGACGCAAA+GGG | + | chr4.1:47382254-47382273 | None:intergenic | 45.0% | |
TACTGCATGGCCTCTTACAA+GGG | + | chr4.1:47380994-47381013 | None:intergenic | 45.0% | |
TAGGTGGCCCAACAAATCAT+GGG | - | chr4.1:47380543-47380562 | MS.gene61638:intron | 45.0% | |
TCACAGCCATCAGAAAGTGA+AGG | + | chr4.1:47382898-47382917 | None:intergenic | 45.0% | |
TCGATCGCCAATTTCGTCTA+TGG | + | chr4.1:47382352-47382371 | None:intergenic | 45.0% | |
TCTCCGTTGTATGCAAGCTT+TGG | - | chr4.1:47381034-47381053 | MS.gene61638:intron | 45.0% | |
TGCATTCAAACAGCGTTTCG+TGG | - | chr4.1:47380173-47380192 | MS.gene61638:intron | 45.0% | |
TGGGCTTCAAGGTTTGATTG+GGG | + | chr4.1:47380074-47380093 | None:intergenic | 45.0% | |
TGTCCCTTTCACGTTAGATC+TGG | + | chr4.1:47383472-47383491 | None:intergenic | 45.0% | |
TTACTGCATGGCCTCTTACA+AGG | + | chr4.1:47380995-47381014 | None:intergenic | 45.0% | |
TTGGGCCACCTACTATCTAT+CGG | + | chr4.1:47380535-47380554 | None:intergenic | 45.0% | |
TTTCTACCGTTCACCTTGCT+TGG | - | chr4.1:47379280-47379299 | MS.gene61638:intron | 45.0% | |
! | AGAGCCTACCCATGATTTGT+TGG | + | chr4.1:47380554-47380573 | None:intergenic | 45.0% |
! | CCCGCAAATGGGTTTATAAG+TGG | + | chr4.1:47380649-47380668 | None:intergenic | 45.0% |
! | GTTTTGTGACTGACAACGCT+TGG | + | chr4.1:47382871-47382890 | None:intergenic | 45.0% |
! | TCCTCTTTTCCACTTTGCAG+TGG | - | chr4.1:47382611-47382630 | MS.gene61638:CDS | 45.0% |
!! | AATGATGGTGCTGCACCTAT+TGG | - | chr4.1:47380029-47380048 | MS.gene61638:intron | 45.0% |
!! | ACTAAGTTGATCGACCCTGA+GGG | - | chr4.1:47382272-47382291 | MS.gene61638:intron | 45.0% |
!! | AGAGCACTACGAGCTTTGAA+AGG | - | chr4.1:47380951-47380970 | MS.gene61638:intron | 45.0% |
!! | AGGCAAGTGGATTAGAGCAT+TGG | - | chr4.1:47379020-47379039 | MS.gene61638:CDS | 45.0% |
!! | CAACCCCAACTGCTTTTATC+AGG | + | chr4.1:47382679-47382698 | None:intergenic | 45.0% |
!! | GAGCCTACCCATGATTTGTT+GGG | + | chr4.1:47380553-47380572 | None:intergenic | 45.0% |
!!! | AATTTTTTTGGCGGCATGGG+AGG | + | chr4.1:47379232-47379251 | None:intergenic | 45.0% |
!!! | ATTTTAGCAGGGGTTGGTTC+CGG | - | chr4.1:47383423-47383442 | MS.gene61638:intron | 45.0% |
!!! | TGTTTTAGGGAAAGGTTGGG+GGG | - | chr4.1:47381778-47381797 | MS.gene61638:intron | 45.0% |
!!! | ATTTATTAACATATATTTTT+AGG | - | chr4.1:47380436-47380455 | MS.gene61638:intron | 5.0% |
AAGGCGTGTTCGCTTGTCAT+TGG | - | chr4.1:47381082-47381101 | MS.gene61638:CDS | 50.0% | |
ACCTAAGCTCAATGGAGGAG+GGG | - | chr4.1:47383521-47383540 | MS.gene61638:CDS | 50.0% | |
AGCAAAACGTGAGAGAGCCA+TGG | - | chr4.1:47381480-47381499 | MS.gene61638:CDS | 50.0% | |
AGGCTAGCAAGTTTCGCCAT+CGG | - | chr4.1:47379955-47379974 | MS.gene61638:intron | 50.0% | |
AGGCTTCAAGCCCTTGTAAG+AGG | - | chr4.1:47380981-47381000 | MS.gene61638:intron | 50.0% | |
ATGGATGGCTGTACGTCCTT+GGG | - | chr4.1:47382714-47382733 | MS.gene61638:intron | 50.0% | |
CAGTTGGGGTTGGAATTGGT+TGG | - | chr4.1:47382687-47382706 | MS.gene61638:intron | 50.0% | |
GATGAGATAAGGCCCGCAAA+TGG | + | chr4.1:47380661-47380680 | None:intergenic | 50.0% | |
GATGATGTTAGCACTCGCAG+AGG | + | chr4.1:47383173-47383192 | None:intergenic | 50.0% | |
GCCACTGCAAAGTGGAAAAG+AGG | + | chr4.1:47382615-47382634 | None:intergenic | 50.0% | |
GTAGGTGGCCCAACAAATCA+TGG | - | chr4.1:47380542-47380561 | MS.gene61638:intron | 50.0% | |
TCTTCCACTAGCAAGTCAGC+AGG | - | chr4.1:47382922-47382941 | MS.gene61638:intron | 50.0% | |
TGAGAGTTCAGGCTCGTGTT+CGG | - | chr4.1:47381057-47381076 | MS.gene61638:intron | 50.0% | |
TGGCCCAACAAATCATGGGT+AGG | - | chr4.1:47380547-47380566 | MS.gene61638:intron | 50.0% | |
! | AGGCCTTATCCCATCCAATG+TGG | - | chr4.1:47380456-47380475 | MS.gene61638:intron | 50.0% |
! | CATCTAGAGCATGACCCGAA+TGG | - | chr4.1:47380508-47380527 | MS.gene61638:intron | 50.0% |
! | CTTTTCCACTTTGCAGTGGC+AGG | - | chr4.1:47382615-47382634 | MS.gene61638:CDS | 50.0% |
! | GCAAGCTTTGGTGAGAGTTC+AGG | - | chr4.1:47381046-47381065 | MS.gene61638:intron | 50.0% |
! | GGCATATGCTCTAGCTCATC+AGG | - | chr4.1:47381501-47381520 | MS.gene61638:CDS | 50.0% |
!! | CAAACCTGCTGACTTGCTAG+TGG | + | chr4.1:47382929-47382948 | None:intergenic | 50.0% |
!! | GAAGGTTGGTGTGACAGTGT+GGG | - | chr4.1:47381409-47381428 | MS.gene61638:intron | 50.0% |
!! | GACTAAGTTGATCGACCCTG+AGG | - | chr4.1:47382271-47382290 | MS.gene61638:intron | 50.0% |
!!! | TTTTAGCAGGGGTTGGTTCC+GGG | - | chr4.1:47383424-47383443 | MS.gene61638:intron | 50.0% |
ACCGGCCCTTCACTTTCTGA+TGG | - | chr4.1:47382889-47382908 | MS.gene61638:intron | 55.0% | |
CAAAGCTCGTAGTGCTCTCC+TGG | + | chr4.1:47380949-47380968 | None:intergenic | 55.0% | |
GAGAGTTCAGGCTCGTGTTC+GGG | - | chr4.1:47381058-47381077 | MS.gene61638:intron | 55.0% | |
GATGGATGGCTGTACGTCCT+TGG | - | chr4.1:47382713-47382732 | MS.gene61638:intron | 55.0% | |
GCCATCAGAAAGTGAAGGGC+CGG | + | chr4.1:47382893-47382912 | None:intergenic | 55.0% | |
TCCCCTCCTCCATTGAGCTT+AGG | + | chr4.1:47383525-47383544 | None:intergenic | 55.0% | |
! | GGGCCTTATCTCATCCAAGG+TGG | - | chr4.1:47380666-47380685 | MS.gene61638:intron | 55.0% |
! | TGCGGGCCTTATCTCATCCA+AGG | - | chr4.1:47380663-47380682 | MS.gene61638:intron | 55.0% |
!! | GGAAGGTTGGTGTGACAGTG+TGG | - | chr4.1:47381408-47381427 | MS.gene61638:intron | 55.0% |
!! | TTTAGCAGGGGTTGGTTCCG+GGG | - | chr4.1:47383425-47383444 | MS.gene61638:intron | 55.0% |
AGGCAGCAGGCCGTTTCTTC+AGG | - | chr4.1:47382646-47382665 | MS.gene61638:intron | 60.0% | |
TCCACTTTGCAGTGGCAGGC+AGG | - | chr4.1:47382619-47382638 | MS.gene61638:CDS | 60.0% | |
TCCTGCCTGCCACTGCAAAG+TGG | + | chr4.1:47382623-47382642 | None:intergenic | 60.0% | |
TGCAGTGGCAGGCAGGATCA+AGG | - | chr4.1:47382626-47382645 | MS.gene61638:intron | 60.0% | |
TTCAGGCTCGTGTTCGGGCA+AGG | - | chr4.1:47381063-47381082 | MS.gene61638:intron | 60.0% | |
GCAGGCAGGATCAAGGCAGC+AGG | - | chr4.1:47382633-47382652 | MS.gene61638:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 47379009 | 47383587 | 47379009 | ID=MS.gene61638 |
chr4.1 | mRNA | 47379009 | 47383587 | 47379009 | ID=MS.gene61638.t1;Parent=MS.gene61638 |
chr4.1 | exon | 47383504 | 47383587 | 47383504 | ID=MS.gene61638.t1.exon1;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47383504 | 47383587 | 47383504 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
chr4.1 | exon | 47382394 | 47382642 | 47382394 | ID=MS.gene61638.t1.exon2;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47382394 | 47382642 | 47382394 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
chr4.1 | exon | 47381424 | 47381651 | 47381424 | ID=MS.gene61638.t1.exon3;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47381424 | 47381651 | 47381424 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
chr4.1 | exon | 47381074 | 47381187 | 47381074 | ID=MS.gene61638.t1.exon4;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47381074 | 47381187 | 47381074 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
chr4.1 | exon | 47379476 | 47379965 | 47379476 | ID=MS.gene61638.t1.exon5;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47379476 | 47379965 | 47379476 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
chr4.1 | exon | 47379009 | 47379166 | 47379009 | ID=MS.gene61638.t1.exon6;Parent=MS.gene61638.t1 |
chr4.1 | CDS | 47379009 | 47379166 | 47379009 | ID=cds.MS.gene61638.t1;Parent=MS.gene61638.t1 |
Gene Sequence |
Protein sequence |